mRNA_D-herbacea_F_contig11.851.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Match: D8LQF4_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQF4_ECTSI) HSP 1 Score: 165 bits (418), Expect = 6.790e-45 Identity = 116/257 (45.14%), Postives = 131/257 (50.97%), Query Frame = 1
Query: 1 ALGHAARGGDVVLFRCRGLLGCLQRWASGSDWDHVGVVVSRGNGLPLQLLESCRGGVRLYPLVDRVRAYQEQGVASMVAFRRLNCPLPAEARARLETFAQLVEGKTYGLVLPFLPWWPR-DRSPEKKT-------------PPYTTKSNTGR---------------------------------------------MAGNGN------SLDDPGSTT--PSVDNRNRKAMP--PSYLCSQLAGAALSEMGVLKEGG 564
AL A GGDVVLFRCRG+L LQRW + WDHVGVVVS G L LLES GGV YPLV+RVRAY +QG AS VAFRRL CP PAE+RARLE F++ VEGKTYG+VLPF P P+ DRS K P +T G AG+G + D G TT PS + + P SYLCSQL GAALSEMGVL+ GG
Sbjct: 267 ALEQEAHGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVSGGPSGRLDLLESTHGGVHRYPLVERVRAYHDQGFASRVAFRRLRCPRPAESRARLEEFSRQVEGKTYGIVLPFTPSGPKGDRSRTKXXXXXXSSPAFQPTMPSESTDCGGGEHGDVARGGRAGLESRRGQGPAFAVAKEXXXXXXXXXXXXXXXXANAAGSGEGQRGSATADAIGETTTLPSFSSGKSEKTPLSASYLCSQLVGAALSEMGVLRGGG 523
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Match: A0A6H5JAA8_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAA8_9PHAE) HSP 1 Score: 167 bits (423), Expect = 1.480e-44 Identity = 112/248 (45.16%), Postives = 129/248 (52.02%), Query Frame = 1
Query: 1 ALGHAARGGDVVLFRCRGLLGCLQRWASGSDWDHVGVVVSRGNGLPLQLLESCRGGVRLYPLVDRVRAYQEQGVASMVAFRRLNCPLPAEARARLETFAQLVEGKTYGLVLPFLPWWPRDRSPEKK----------TPPYTTKSNT-------------GRM---------------------------AGNGN------SLDDPGSTTP----SVDNRNRKAMPPSYLCSQLAGAALSEMGVLKEGG 564
AL A GGDVVLFRCRG+L LQRW + WDHVGVVV G L+LLES GGV LYPLV+RVRAY +QG AS VAFRRL CP PAE+RARLE F++ VEGKTYG+VLP P P+ P + +T GR AGNG + + G TT S + A+ PSYLCSQL GAALSEMGVL+ GG
Sbjct: 779 ALEQEAHGGDVVLFRCRGMLSRLQRWVLRTQWDHVGVVVCGGPSARLELLESTHGGVHLYPLVERVRAYHDQGFASTVAFRRLRCPRPAESRARLEVFSRQVEGKTYGIVLPCTPSGPKXXXXXXXXXXXXXXXXAVQPTMLRESTDSGRGERGDVARGGRAGLEGTRGQGPAFAVAKKEEEVVLCANAAGNGEGQRRSATANAIGETTKLPTFSSGTSEKTALSPSYLCSQLVGAALSEMGVLRGGG 1026
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Match: A0A5D6Y1I1_9STRA (PX domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1I1_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.320e-10 Identity = 49/106 (46.23%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 25 GDVVLFRCRGLLGCLQRWASGSDWDHVGVVVSRGNGLPLQLLESCRGGVRLYPLVD---RVRAYQEQGVASMVAFRRLNCPL-PAEARARL-ETFAQLVEGKTYGL 327
GD+VLFRC G + +QR +GS+WDHVGVVV + LLE+ GV +PLV R+ AY V VA R+L+ PL AR L FA VEG YGL
Sbjct: 342 GDLVLFRCCGPVSGIQRSMTGSEWDHVGVVVPGHSPTSFYLLEATGEGVSAFPLVSATSRLIAYSAFHV-KYVALRKLHTPLITLSARFDLLRRFAFEVEGNPYGL 446
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Match: A0A7S3Z3J4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z3J4_9EUKA) HSP 1 Score: 67.4 bits (163), Expect = 8.920e-10 Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 25 GDVVLFRCRGLLGCLQRWASGSDWDHVGVVVSRGNGL---------PLQLLESCRGGVRLYPLVDRVRAYQEQGVASMVAFRRLNCP-LPAEARARLETFAQLVEGKTYGL 327
GD+VLFR +G L +QR S++DHVGVVVS+ L +LES GV+ YPL R+RA+ G +++A R+L C E L+ F EGK YGL
Sbjct: 181 GDLVLFRTQGTLPAIQRTVLSSEFDHVGVVVSKQMSTFSKQFHPSAGLYILESTNEGVQSYPLRTRLRAWHLSG--AVMALRQLECKKTKLEVAKILQEFTADSEGKGYGL 289
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Match: F0WJL3_9STRA (Ribonuclease H2 subunit A putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJL3_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.080e-9 Identity = 55/181 (30.39%), Postives = 81/181 (44.75%), Query Frame = 1
Query: 25 GDVVLFRCRGLLGCLQRWASGSDWDHVGVVVSRGNGLPLQLLESCRGGVRLYPLVDRVRAYQEQGVASMVAFRRLNCPLPAEARARLETFAQLVEGKTYGLVLPFLPWWPRDRSPEKKTPPYTTKSNTGRMAGNGNSLDDPGSTTPSVDNRNRKAMPP----SYLCSQLAGAALSEMGVLK 555
GD++LF CR QR +GS +DHVG+V+ G L+LLE+ G+R+YPL+ R++ Y + +V L P AR L F V+G Y + F DR ++K K + ++ N SV + P Y CS L +AL E+G L+
Sbjct: 264 GDILLFSCRFGSSICQRKFTGSRFDHVGIVIPGLRGGNLRLLEATGEGIRVYPLIARIKTYAREVTERIVVRSFLVKRDPESARCLL-AFVNSVDGNAYSFLSIFQGLNKSDRCVQQKQLYDEEKWSQAFVSPLQNFTTQSVEIAKSVVASQKTKQSPHKRRKYFCSSLVASALKELGWLQ 443
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Match: A0A8K1CD53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD53_PYTOL) HSP 1 Score: 59.3 bits (142), Expect = 5.540e-7 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1
Query: 25 GDVVLFRCRGLLGCLQRWASGSDWDHVGVVVSRGNGLP-LQLLESCRGGVRLYPLVDRVRAYQEQGVASMVAFRRLNCPLPAEARAR--LETFAQLVEGKTYGLVL 333
GD+VLF+ G + LQR +GS+WDHV +V+S LLE+ GV L P+ R+ AY ++ R+L PL + A L FA V+ YGL L
Sbjct: 565 GDLVLFQSCGPVSALQRSCTGSEWDHVALVMSSATSKKNYMLLEATGEGVTLLPMRSRLAAYSAYHTRR-ISLRKLQTPLLSYAVREDLLRHFATRVQSCPYGLSL 669
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Match: A0A7S2U474_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U474_9EUKA) HSP 1 Score: 55.8 bits (133), Expect = 1.260e-6 Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1
Query: 25 GDVVLFRCRGLLGCLQRWASGSDWDHVGVVVSRGNGL---------PLQLLESCRGGVRLYPLVDRVRAYQEQGVASMVAFRRL 249
GD+VLFR +G L +QR S++DHVGVVVS+ + +LES GV+ YPL R+RA+ G +++A R+L
Sbjct: 66 GDLVLFRTQGTLPAIQRTVLSSEFDHVGVVVSKQMSTFSKQFHPSAGMYILESTNEGVQSYPLRTRLRAWHLSG--AVMALRQL 147
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Match: A0A7S1NCK3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NCK3_9EUGL) HSP 1 Score: 51.6 bits (122), Expect = 3.800e-5 Identity = 39/111 (35.14%), Postives = 53/111 (47.75%), Query Frame = 1
Query: 25 GDVVLFRCRGLLGCLQRWASG------------SDWDHVGVVVSRGNGLPLQLLESCRGGVRLYPLVDRVRAYQEQGVASMVAFRRLNCPLPAEARARLETFAQLVEGKTY 321
GD+VLF + CL+ G S WDHVG+VV +G L +L++ GGVR YPL++R+R + + FRRL P E R +L F V Y
Sbjct: 15 GDLVLFNRQ----CLKMSPFGAAVCFSAKLYCASKWDHVGIVVRDPDG-SLHILDAGFGGVRKYPLLERLRRSKSDDIC----FRRLAVPRTNEMRQQLIDFTTEVVQAPY 116 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig11.851.1 >prot_D-herbacea_F_contig11.851.1 ID=prot_D-herbacea_F_contig11.851.1|Name=mRNA_D-herbacea_F_contig11.851.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=188bp ALGHAARGGDVVLFRCRGLLGCLQRWASGSDWDHVGVVVSRGNGLPLQLLback to top mRNA from alignment at D-herbacea_F_contig11:909528..912626- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig11.851.1 ID=mRNA_D-herbacea_F_contig11.851.1|Name=mRNA_D-herbacea_F_contig11.851.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3099bp|location=Sequence derived from alignment at D-herbacea_F_contig11:909528..912626- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig11:909528..912626- >mRNA_D-herbacea_F_contig11.851.1 ID=mRNA_D-herbacea_F_contig11.851.1|Name=mRNA_D-herbacea_F_contig11.851.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1128bp|location=Sequence derived from alignment at D-herbacea_F_contig11:909528..912626- (Desmarestia herbacea DmunF female)back to top |