mRNA_D-herbacea_F_contig11.845.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: B5LWG6_9PHYC (Putative oligoribonuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG6_9PHYC) HSP 1 Score: 284 bits (727), Expect = 1.010e-93 Identity = 128/237 (54.01%), Postives = 173/237 (73.00%), Query Frame = 1
Query: 1 MTEESVVPSRKRISSNYDRYNPWFWVDMETTGLDPDTSEILEVNVVVTNTRLEPWDSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQEVGIGRPERNDLSFFDKTMDTNGANLTSYDVSCTAYTSKSPHR-RVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSSTHRAKDDIIDSIKLYKF 708
M E ++K + YDR NPWFW+D+ET+ LD TS++LE+ +VVT++ L WDS+H+V+HHP+NILM+KSS+WCK KF S S+GGNGLF++CH+S T+ DA ++ FFEYYS+ E+G GRP +FFD+T NG L+ YD+SC R + LLAGSTV+FDRR + HFP L+++LSHKNVDVT+LLETAKRF D++ KP+P+ HRA DDI+DS+ LYK+
Sbjct: 1 MAEAHYGRTKKVFNRGYDRNNPWFWIDIETSSLDFSTSDVLEIAIVVTDSGLNVWDSLHVVIHHPINILMLKSSNWCKEKFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYSTHEIGRGRPAHKSRTFFDRTSGANGMKLSPYDISCQVQNFTGTRRSQGLLAGSTVYFDRRIIEKHFPVLRKYLSHKNVDVTSLLETAKRFHPDLIENKPKPTMVHRAMDDILDSLTLYKY 237
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: Q6XM84_9PHYC (FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM84_9PHYC) HSP 1 Score: 269 bits (687), Expect = 8.010e-88 Identity = 125/232 (53.88%), Postives = 171/232 (73.71%), Query Frame = 1
Query: 40 SSNYDRYNPWFWVDMETTGLDPDTSEILEVNVVVTNTRLEPWDSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQEVGIG--RPERNDLSFFDKTMDTNGANL-----TSYDV--SCTAYTSKSPHRRVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSSTHRAKDDIIDSIKLYKF 708
+ Y+RYNPWFW+DMET+ LD SE+LEV +VVT+ L WDS+H+V+HHP+NILM+KSS+WCK++F S+ +GGNGLF+ECH+S+T+ ADA + +FFEYY + ++G G RP ++ SFFD+T TNG L T D+ CT S ++ LL GSTV+FDRR + THFP L+++LSHKN+DVTT+LETAKRF D++ KP+P HRA DDI+DS+ LY++
Sbjct: 3 NKTYERYNPWFWIDMETSSLDFSQSEVLEVALVVTDHHLNVWDSLHLVIHHPINILMLKSSNWCKQRFCSLKYGGNGLFDECHYSETSIADATHKMLQFFEYYCTHDIGTGSRRPPPSERSFFDRTRGTNGVLLSPLRCTHRDIPKQCTTTPGGSKKKQALLTGSTVYFDRRIIETHFPLLQKYLSHKNIDVTTMLETAKRFRPDLMQYKPKPLMKHRAMDDIMDSLALYRY 234
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: D8LPG5_ECTSI (EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI) HSP 1 Score: 224 bits (572), Expect = 5.850e-70 Identity = 115/236 (48.73%), Postives = 159/236 (67.37%), Query Frame = 1
Query: 31 KRISSNYDRYNPWFWVDMETTGLDPDTSEILEVNVVVTNTRLEPWDSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQEVGIGRPERNDLS----FFDKTMDTNGANLTSYDVSCTAYTS---KSPHRRVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSSTHRAKDDIIDSIKLYKFFKE 717
K +Y+ PWFW+DMETTGLD DT+ ILE+ +VVT+ L DS+ +VLHHP +IL+ +SS+WC+RKF GGNGLFE CHFS +H +A +W FF++YS ++VG GR + ++ FFD+T+ NG L + D S + +S +++ LLAGSTV+FDR FL+ +FP LK F ++ VDV+T LE +R+ D+ AK PR + +HRA DDI+DSI L KFFKE
Sbjct: 31 KTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILLARSSAWCRRKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYS-KDVG-GRYDTTQITSSQPFFDRTLGANGTFLGASDASRCRHQQQPRRSNYKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKE 264
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: A0A836CDV0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV0_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.400e-31 Identity = 77/246 (31.30%), Postives = 122/246 (49.59%), Query Frame = 1
Query: 67 WFWVDMETTGLDPDTSE--ILEVNVVVTNTRLEPWDSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYS---------SQEVGIGRPERN--DLSFFDKTMDTNGANLTSYDVSCT-------AYTSKSPHR------RVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSSTHRAKDDIIDSIKLYKFFKEKLF 726
W W D+E TGLDP + +LE+ VT L D+ H+++H P +L +SSWC F GGN LF++C S + A+A +L F ++ + EV +RN + F ++ A + T AY P RV+ AG + +FDR ++ FP+L+++++HK +DVT++LE +R+ D+L P P THRA D+++SI L ++ LF
Sbjct: 22 WIWCDIECTGLDPTSPGFGVLEIAAAVTGDDLTVQDTFHVIIHQPDRVL-AGASSWCAEHFGPRYAGGNDLFQQCRASVISEAEAGELLEAFIVKHAKPRKARAAAAAEVPEAVVKRNVFKTAEFGDVIEDGDAMAGDIEAQDTRRHRAGPAYGRPRPRAQQHDVYRVMFAGCSCYFDRGVILNRFPNLRKYIAHKTIDVTSVLEITRRWRPDLLRSLPAPQGTHRALPDVLESICLLRWVMTNLF 266
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: A0A835Z4U2_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U2_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.450e-30 Identity = 71/230 (30.87%), Postives = 118/230 (51.30%), Query Frame = 1
Query: 67 WFWVDMETTGLDPDTSE--ILEVNVVVTNTRLEPWDSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQEVGIGRPERNDLSFFDKTMDTNGANLTSYDVSCTAYTSKS-------------PHRRVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSSTHRAKDDIIDSIKLYKFF 711
W ++D+E T LD ILE+ + + +E D+ H++++ P +I+ +S WCK++F S GGN LF +C S T A A ML +F ++ + FF A L + D + TS++ H RV+LAG +V+FDR L+ +P L+ + HK +++++LLE A+++ DILA P HRA D+++S+ L ++F
Sbjct: 9 WLFLDIECTQLDYQAHNFGILEIAAAIVDNSMEVIDTFHVIVNQPAHIIAA-ASKWCKKRFCSRLEGGNDLFAQCDASIITEAQAGFMLEQFIMKHAKERHMQPDEAEQKRRFFQ------AAELETIDAAIETETSEAFIEKDVEKTQGGISHFRVMLAGCSVYFDRAVLLHIYPRLRNLIGHKTIELSSLLEIARKWRPDILATLPPAQDAHRALIDVLESVSLLRWF 231
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: A0A835YX31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX31_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.850e-25 Identity = 72/246 (29.27%), Postives = 110/246 (44.72%), Query Frame = 1
Query: 67 WFWVDMETTGLDPDTSE--ILEVNVVVTNTRLEPWDSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQ------------EVGIGRPERNDLSFFDKTMD--------TNGANLTSYDVSCTAYTSKSPHR----RVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSSTHRAKDDIIDSIKLYKFFKEKLF 726
W W D+E TGLDP ILE+ +T L D+ H+V+H P +L +S WC F GGN LFE+ S + + A ML F ++ E R F D + T GA + RV+ AG + +FDR ++ FP+L+++++HK +DVT++LE +R+ D+L P P HRA D+++S+ L ++ LF
Sbjct: 33 WLWCDIECTGLDPAAPGFGILEIAAAITGDDLTVQDTFHVVVHQPPRVL-AGASRWCAEHFGPRYAGGNDLFEQSKASVISESAAGEMLEAFIVKHAKPRRARAAAAAEGPEAACKRSMFKTAEFGDVMEEVVMPEGPATEGAQRQQPXXXXXRTNRPKAQQHDVFRVMFAGCSCYFDRGAILARFPNLRKYVAHKTIDVTSVLEITRRWRPDLLRCLPAPQGVHRALPDVLESVCLLRWVMTNLF 277
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: A0A0C2D1B7_9DELT (Oligoribonuclease n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2D1B7_9DELT) HSP 1 Score: 99.8 bits (247), Expect = 2.890e-22 Identity = 73/228 (32.02%), Postives = 106/228 (46.49%), Query Frame = 1
Query: 52 DRYNPWFWVDMETTGLDPDTSEILEVNVVVTNTRLEPW-DSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQEVGIGRPERNDLSFFDKTMDTNGANLTSYDVSCTAYTSKSPHRRVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDI--LAKKPRPSSTHRAKDDIIDSIKLYKFFKEKLF 726
D + P W+DME TGLDPDT ++LE+ ++TN LE + +V+H P +L WC HG +GL E S T +A ER L+F + P + L G+T+ DRRFLV H P L+RF +++VDVTTL E +R+ + +AK + THRA DDI +SI ++++E +F
Sbjct: 3 DPHPPLIWIDMEMTGLDPDTEKVLEIATLITNADLELIAEGPELVIHQPDEVLDAMGE-WCVEH-----HGASGLTELARASTLTVEEA---------------------ERQTLAFVQ---------------------AHCPPGQSPLCGNTIGQDRRFLVRHMPALERFFHYRSVDVTTLKELCQRWYPTLPGIAK----AETHRALDDIRESIAELRYYREHMF 178
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: A0A661MVW6_9DELT (Oligoribonuclease n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661MVW6_9DELT) HSP 1 Score: 94.7 bits (234), Expect = 3.320e-20 Identity = 60/219 (27.40%), Postives = 108/219 (49.32%), Query Frame = 1
Query: 73 WVDMETTGLDPDTSEILEVNVVVTNTRLEPW-DSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQEVGIGRPERNDLSFFDKTMDTNGANLTSYDVSCTAYTSKSPHRRVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSSTHRAKDDIIDSIKLYKFFKEKLF 726
W+DME +GL+P+T ILEV V+VT+ L+ + ++VLH P +L ++++ HG +GL + S A A+ L F ++ + R+ LAG+++H DRRF+ + P+++ +L ++NVDV+T+ E A+R+ + +P +HRA DD+++SI+ K++++ LF
Sbjct: 27 WMDMEMSGLEPETERILEVAVLVTDGELKVVAEGPNLVLHQPDAVLEAMD------EWNTSHHGQSGLTKRVRESTIDEAQASAALLAFLAEHTKK------------------------------------------RKAPLAGNSIHQDRRFVARYLPEVEDWLHYRNVDVSTIKELAQRWYPKRYSGRPTKKGSHRAMDDLLESIEELKYYRKALF 197
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: A0A7Y3BUH1_9DELT (Oligoribonuclease n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A7Y3BUH1_9DELT) HSP 1 Score: 93.2 bits (230), Expect = 7.800e-20 Identity = 59/219 (26.94%), Postives = 110/219 (50.23%), Query Frame = 1
Query: 73 WVDMETTGLDPDTSEILEVNVVVTNTRLEPW-DSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQEVGIGRPERNDLSFFDKTMDTNGANLTSYDVSCTAYTSKSPHRRVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSSTHRAKDDIIDSIKLYKFFKEKLF 726
W+DME +GL+P+T +LEV V++T+ L + ++VL+ ++L + +++ HG +GL + S + A+ L FF ++ + +K+P LAG+++H DRRFL + P+++ +L ++NVDV+T+ E A+R+ A +P +HRA DD+++SI+ K++++ LF
Sbjct: 6 WMDMEMSGLEPETDRVLEVAVLITDGELNVVAEGPNLVLNQSEDVLSAMDA------WNTSHHGQSGLTQRVRESTLSEEQASAALLGFFSEHTQK-------------------------------------NKAP-----LAGNSIHQDRRFLARYLPEVEDWLHYRNVDVSTIKELARRWYPKQYAGRPTKKGSHRAMDDLMESIEELKYYRKALF 176
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Match: A0A410FU17_9BACT (3'-to-5' oligoribonuclease (Orn) n=1 Tax=Candidatus Bipolaricaulis sibiricus TaxID=2501609 RepID=A0A410FU17_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 1.570e-19 Identity = 66/221 (29.86%), Postives = 103/221 (46.61%), Query Frame = 1
Query: 73 WVDMETTGLDPDTSEILEVNVVVTNTRLEPWDSIHIVLHHPMNILMVKSSSWCKRKFSSISHGGNGLFEECHFSKTTHADANIMLWKFFEYYSSQEVGIGRPERNDLSFFDKTMDTNGANLTSYDVSCTAYTSKSPHRRVLLAGSTVHFDRRFLVTHFPDLKRFLSHKNVDVTTLLETAKRFGSDILAKKPRPSST---HRAKDDIIDSIKLYKFFKEKLF 726
W+D+ETTGLDP+TS ILE+ V+T+ L +V+HHP N +V W + + H +GL +E S VG+ + E L ++ P R LAGS+V FDRRFL+ H P L+ LS++ +DV++L E +R+ K P+ + HRA DI++SI+ + ++ ++F
Sbjct: 2 WIDLETTGLDPETSVILEIAAVITDKHLNVLSQESLVIHHP-NDALVGLDEWVQTQ-----HQASGLLDEVRRSA---------------------VGLTQAEERVLGLV---------------------AARCPPRACPLAGSSVCFDRRFLMRHMPKLEAHLSYRQIDVSSLKELVRRW----YPHKAPPNGSEAKHRALPDILESIEELRRYRAEVF 170 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig11.845.1 >prot_D-herbacea_F_contig11.845.1 ID=prot_D-herbacea_F_contig11.845.1|Name=mRNA_D-herbacea_F_contig11.845.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=246bp MTEESVVPSRKRISSNYDRYNPWFWVDMETTGLDPDTSEILEVNVVVTNTback to top mRNA from alignment at D-herbacea_F_contig11:833897..834634+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig11.845.1 ID=mRNA_D-herbacea_F_contig11.845.1|Name=mRNA_D-herbacea_F_contig11.845.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=738bp|location=Sequence derived from alignment at D-herbacea_F_contig11:833897..834634+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig11:833897..834634+ >mRNA_D-herbacea_F_contig11.845.1 ID=mRNA_D-herbacea_F_contig11.845.1|Name=mRNA_D-herbacea_F_contig11.845.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1476bp|location=Sequence derived from alignment at D-herbacea_F_contig11:833897..834634+ (Desmarestia herbacea DmunF female)back to top |