mRNA_D-herbacea_F_contig11.844.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: B5LWG8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG8_9PHYC) HSP 1 Score: 188 bits (478), Expect = 5.280e-58 Identity = 102/176 (57.95%), Postives = 126/176 (71.59%), Query Frame = 1
Query: 13 PFIGCSTTEGLSRSDEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTL-QTDGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMKTTEARSKGKHRRANKSSSHTKSYSGKFKMVF 537
PF+GC+ + LS SD++LL SV+ WYN S RV FL IV+R NG+SLRVIDWLVTN+ KT V L + DG PTDL RDYQK LSAYNK+NMDPFARR ++ I +FG +TR ST+GQLNFFRWFLKN + F+H NK VVE+ MK R K R K+ + + +SGKF + F
Sbjct: 4 PFLGCTKSADLSDSDQLLLLSVLRWYNTNSKRVSGFLEIVERNNGLSLRVIDWLVTNYCKTTPVMLHRRDGPPTDLYRDYQKYLSAYNKKNMDPFARRKRVTITLFGKKTRKSTLGQLNFFRWFLKNKLEEFMHLNKAVVEDDMKRVADRVSQKKRHRKKAPT-ARVFSGKFLVEF 178
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: Q8QND8_ESV1K (EsV-1-141 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QND8_ESV1K) HSP 1 Score: 179 bits (454), Expect = 5.720e-54 Identity = 85/133 (63.91%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 46 SRSDEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQTDGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMK 444
SR DEVLL+SV+ W+NEE SRV F IV KNG+SLR+IDWL+TNF+K+ +V +++DGLP +L RDY KNLSA+NK+N DPFARR +I I++FG E R ST+GQLNFFRWFL N+ GFL NK V+E HMK
Sbjct: 20 SRKDEVLLNSVLMWFNEEESRVQTFSDIVHHKNGLSLRIIDWLITNFTKSFSVAIESDGLPRNLRRDYHKNLSAHNKKNFDPFARRRRIHIVLFGEERRVSTIGQLNFFRWFLSKNLVGFLLENKSVIEKHMK 152
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: D8LPG7_ECTSI (EsV-1-141 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPG7_ECTSI) HSP 1 Score: 177 bits (450), Expect = 1.580e-52 Identity = 83/136 (61.03%), Postives = 108/136 (79.41%), Query Frame = 1
Query: 46 SRSDEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQTDGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMKTTE 453
SR DEVLL+SV+ W+NEE SRV F IV KNG+SLR+IDWL+TNF+++ +V +++DGLP +L RDY KNLSA+NK+N DPFARR +I I++FG+E R ST+GQLNFFRWFL N+ GFL NK +E HMK ++
Sbjct: 26 SRKDEVLLNSVLLWFNEEKSRVQTFSDIVHHKNGLSLRIIDWLITNFTRSFSVAIESDGLPRNLRRDYHKNLSAHNKKNFDPFARRRRIQIVLFGNEERVSTIGQLNFFRWFLSKNLVGFLLENKSAIEKHMKDSD 161
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: Q6XM82_9PHYC (FirrV-1-A5 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM82_9PHYC) HSP 1 Score: 157 bits (396), Expect = 1.230e-45 Identity = 81/175 (46.29%), Postives = 116/175 (66.29%), Query Frame = 1
Query: 16 FIGC-STTEGLSRSDEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQTDGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMKTTEARSKGKHRRANKSSSHTKSYSGKFKMVF 537
F+ C + GL+ S+E+LL SV+ WYN+++ RV + ++R +SLRVIDW VTN+S+ + ++ DGLP DL +DYQKNLS+Y K+ MDPFARR +I I++FG R ST+GQLNFFRWFL +NI L K VE+ MK + +R +K T S++G+F++ F
Sbjct: 4 FLRCRKSAAGLTTSEELLLSSVLTWYNQDADRVKELMQFIERNKCLSLRVIDWFVTNYSRNTPIMMERDGLPRDLYKDYQKNLSSYKKKYMDPFARRKRITILMFGQTERTSTIGQLNFFRWFLGSNIRQLLDERKQAVEHEMKYSIF-----NRIKSKKKDRTCSFTGRFRVSF 173
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: A0A2P6FTP1_9RHOB (Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2P6FTP1_9RHOB) HSP 1 Score: 97.1 bits (240), Expect = 3.380e-22 Identity = 52/144 (36.11%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 61 VLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQTDGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMKTTEARSKGKHRRANKS 492
+LL+S+++++ E + + + I++ ++ +SLR+IDW VT FS+ + +G P + +Y+ L AY+KR MDPF RR++I + GSE +T+GQ+NFFRW ++N I +++ N DV+E MK+ + R+ N S
Sbjct: 11 LLLNSLLQYF-ENKVNMESLVEILQDRSLVSLRMIDWFVTKFSRVRNLQYDVNGKPFAVYSNYKSQLKAYSKRQMDPFCRRDRIVLRKHGSEL-TTTIGQMNFFRWAIENQILKYIYENYDVLEKEMKSENKQKTNLSRKKNNS 152
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: A0A6C0D379_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0D379_9ZZZZ) HSP 1 Score: 93.6 bits (231), Expect = 1.040e-20 Identity = 52/142 (36.62%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 55 DEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQTDGLPT-DLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSE--TRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMKTTEARSKGK 471
+++LL +M +Y +E + + LSI+ ++ +SLR++DW TN++K N T D P + DY+ L AY+KR DPF R ++I + FG++ + +T+GQLNFF+W ++N I ++ N D++E M T + SK K
Sbjct: 7 NDLLLKKLMNYYGDEEN-FNKMLSIINGESKISLRIVDWFSTNYAKKNFTTYDLDTCPRFKIYNDYKLKLKAYSKRRFDPFCRWDRIKV-PFGNKEFSIETTIGQLNFFKWAIENKIIDYIEKNYDIIEEDMNTNNSISKSK 146
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: A0A7C7JFF4_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7JFF4_9FLAO) HSP 1 Score: 93.2 bits (230), Expect = 1.580e-20 Identity = 48/139 (34.53%), Postives = 86/139 (61.87%), Query Frame = 1
Query: 55 DEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQTDGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMKTTEARSKGK 471
+++LL +++++Y E + + + LSI+ ++ +SLRV+DW TN+SK N + ++ +G ++ DY+ NL AY+KR DPF R ++I I + +T+GQLNFFRW + + ++ N + +E M T + S+ K
Sbjct: 11 NKLLLKTLLDFYRENEA-LDDVLSIINGESPISLRVVDWFATNYSKQNFIVIEHNGKRVNVYTDYKLNLRAYSKRRFDPFCRWDRITIPYKDGKHIQTTIGQLNFFRWAIMRGVIDYIKPNLESIERDMNTRNSTSRRK 148
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: A0A6C0CQ95_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CQ95_9ZZZZ) HSP 1 Score: 92.0 bits (227), Expect = 3.910e-20 Identity = 50/146 (34.25%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 55 DEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQTDGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMKTTEARSKGKHRRANKS 492
+ +LL++++++YN + + + LSI+ ++ +SLR++DW TN++K N Q + DY+ L AY+K+ DPF R +I I ++ +T+GQLNFF+W L+NN+ ++ N D +EN M + SK K +KS
Sbjct: 9 NSLLLNNLLKFYNRDGN-LKKMLSIINGESKISLRIVDWFATNYAKQNFTIYQVKNKRFKVYVDYKLKLRAYSKKRFDPFCRWERITIPFEDNKYIQTTIGQLNFFKWALENNVIEYIEENYDDIENDMNKRNSTSKRKKHTTSKS 153
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: A0A6C0C0F2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0C0F2_9ZZZZ) HSP 1 Score: 91.3 bits (225), Expect = 7.920e-20 Identity = 51/147 (34.69%), Postives = 82/147 (55.78%), Query Frame = 1
Query: 31 TTEGLSRSDEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQTDGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVENHMKTTEARSKGK 471
+T + +E+LL S+M +YN + + + +SI+ + +SLR+IDW VTN++K V + + +Y+ L AY+K+ DPF R +I I +T+GQLNFFRW L+NNI ++ N D +E M + S+ K
Sbjct: 2 STRYSTTQNELLLSSLMNFYNNKK-HLDSIISIINGEGKISLRIIDWFVTNYAKEKYVVYTLNNNRFKVFHEYKLKLKAYSKKRFDPFCRWERICIPYDDKHNMETTLGQLNFFRWALENNIIKYIEENYDDIEKDMNSRNTNSRKK 147
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Match: A0A6G6XP86_9PHYC (Uncharacterized protein n=1 Tax=Dishui Lake phycodnavirus 4 TaxID=2704072 RepID=A0A6G6XP86_9PHYC) HSP 1 Score: 89.7 bits (221), Expect = 9.130e-20 Identity = 45/131 (34.35%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 43 LSRSDEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMSLRVIDWLVTNFSKTNTVTLQT-DGLPTDLNRDYQKNLSAYNKRNMDPFARRNKIAIIVFGSETRNSTVGQLNFFRWFLKNNIGGFLHHNKDVVE 432
+S+S ++LL S+ ++YNE++ L ++ + G+SLR I+W +TN++K+N T DG ++ Y+ +L Y+KR DPF R +I I+ + ++TV QLNF RW + N+I ++ +NK +++
Sbjct: 4 ISKSQQLLLHSLSQFYNEKNHS-EQLLDVINHRKGVSLRNIEWFITNYAKSNQTRYNTKDGKDFPVHIQYKASLDGYSKRAFDPFCRTERITFILSSGDEISTTVSQLNFLRWCIVNDIIKYIENNKHILK 133 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig11.844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig11.844.1 >prot_D-herbacea_F_contig11.844.1 ID=prot_D-herbacea_F_contig11.844.1|Name=mRNA_D-herbacea_F_contig11.844.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=180bp MDPFPFIGCSTTEGLSRSDEVLLDSVMEWYNEESSRVHNFLSIVKRKNGMback to top mRNA from alignment at D-herbacea_F_contig11:832455..832994+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig11.844.1 ID=mRNA_D-herbacea_F_contig11.844.1|Name=mRNA_D-herbacea_F_contig11.844.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=540bp|location=Sequence derived from alignment at D-herbacea_F_contig11:832455..832994+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig11:832455..832994+ >mRNA_D-herbacea_F_contig11.844.1 ID=mRNA_D-herbacea_F_contig11.844.1|Name=mRNA_D-herbacea_F_contig11.844.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1080bp|location=Sequence derived from alignment at D-herbacea_F_contig11:832455..832994+ (Desmarestia herbacea DmunF female)back to top |