mRNA_D-herbacea_F_contig109.781.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: A0A6H5JMM1_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM1_9PHAE) HSP 1 Score: 326 bits (835), Expect = 8.850e-104 Identity = 182/269 (67.66%), Postives = 211/269 (78.44%), Query Frame = 1
Query: 1 VGTSALGLQAMEVGVHTMVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHPFTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLYKLMPKGPPQ------GGNTGQYEAMPKGNDVTPLTPVSASPD 789
VGTSALGL+ M VGVHTMVRSTVPIFVLLFSVGMGLQEFR GL+ VV +VSGGV LLFSGQR E FPM GFLLTLLSGMLAG+KWTLSQVLLQGRG++GK V +HIHPFTL+HYMSLSS+A+LVPFA LE +L +MA TFS RMVKT L+IVA S+LA +L++ EFSFI++VSSLSLC+I VVKELLLV+ SV +LGE LS RT +GF +TMVGV LYKL+PKGPPQ GG G+++ + VS SPD
Sbjct: 161 VGTSALGLKVMHVGVHTMVRSTVPIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRSDQEENFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGKGAITVGEHIHPFTLLHYMSLSSAASLVPFALTLELGSLHEMAVTFSGHRMVKTGLMIVAVSLLAFMLVLAEFSFIRRVSSLSLCIIAVVKELLLVMFSVLVLGEHLSGRTGLGFFVTMVGVTLYKLVPKGPPQDLTLKNGGGGGRHDTASTPLGAVKYSGVSVSPD 429
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI) HSP 1 Score: 318 bits (815), Expect = 2.240e-98 Identity = 177/268 (66.04%), Postives = 209/268 (77.99%), Query Frame = 1
Query: 1 VGTSALGLQAMEVGVHTMVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHPFTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLYKLMPKGPPQ-----GGNTGQYEAMPKGNDVTPLTPVSASPD 789
VGTSALGL+ M VGVHTMVRSTVPIFVLLFSVGMGLQEFR GL+ VV +VSGGV LLFSGQR E +FPM GFLLTLLSGMLAG+KWTLSQVLLQGRG++G+ V +HIHPFTL+HYMSLSS+A+LVPFA ALE L +MA TFS R+VKT L+IVA S+LA +L++ EFSFI++VSSLSLC+I VVKELLLV+ SV +LGE LS RT +GF +TM+GV LYKL+PKGPPQ G G+ + + V +PD
Sbjct: 369 VGTSALGLKVMHVGVHTMVRSTVPIFVLLFSVGMGLQEFRCGLLAVVMLVSGGVTLLFSGQRNDQEEDFPMDGFLLTLLSGMLAGLKWTLSQVLLQGRGLYGRGAITVGEHIHPFTLLHYMSLSSAASLVPFALALELGALHEMAVTFSGHRIVKTGLMIVAVSLLAFMLVLAEFSFIRRVSSLSLCIIAVVKELLLVMFSVLVLGEHLSGRTGLGFFVTMIGVTLYKLVPKGPPQHLSLKNGGGGRQDTASTPLGAVKYSGVGVAPD 636
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: A0A1X2IG89_9FUNG (Triose-phosphate transporter family-domain-containing protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IG89_9FUNG) HSP 1 Score: 98.6 bits (244), Expect = 4.350e-20 Identity = 68/232 (29.31%), Postives = 127/232 (54.74%), Query Frame = 1
Query: 52 MVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHP--FTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLYKLMPKGPPQGGNTGQYEAMP 741
MV+S+ P++VLLFS G ++ RV L+ ++ V+ GV L G E +F MVGF+L L++ +++G++W L+Q+LLQ + A ++ P F + ++S L F + F N + E+F L+ +LA +++ EF+ IK ++++L + G+ KE++++ +SVA+ G+ L+ + +G +++ G++ Y Q N GQY+ +P
Sbjct: 1 MVKSSTPVWVLLFSFMFGFEKPRVTLIGIIMVIVFGVFLTVEG-----ETKFDMVGFVLVLVASVVSGLRWNLTQLLLQQDRLGINSPIATLYYLSPIMFVTMLFLSFVVEHPLDQFRQSEHFDNPYHVVESFG---------LMAIGGLLAFAMLLAEFALIKSTNTVTLSVAGISKEIVVISLSVAIYGDELTSKNILGLIVSIAGIIGYNYYKLSKSQQSNKGQYQMIP 218
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: E1ZD43_CHLVA (TPT domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZD43_CHLVA) HSP 1 Score: 97.8 bits (242), Expect = 2.480e-18 Identity = 70/232 (30.17%), Postives = 125/232 (53.88%), Query Frame = 1
Query: 1 VGTSALGLQAMEVGVHTMVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHPFTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAE--RMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLYKLM 690
+G S L + + + M +ST P+F+L+F++ G+++ L VV V++ G+ LL G+ + H +VGFLL + + MLAG++WT++QVLLQG G + H P +++ ++ S TL+ + E R A + A + + L+I +I+A +++ EF+ I S+L+ + G KE++ V +V LGE + A+G + + GVVL+ +
Sbjct: 152 IGFSNYSLVYITLSFYVMCKSTTPLFLLVFAIAWGIEKPSWSLAAVVSVITAGLLLLVYGETKFH-----LVGFLLVMSAAMLAGLRWTITQVLLQGTPESGGAAHGAKKHGGPVEVLYQLTPVMSLTLLLLSLGHEKLWERLPASPYFATVGMGLLSCLIIFGGAIIAFAMVVAEFALIANTSALTFMVAGTFKEIVTVAAAVMFLGEQFTWINAMGLLVLIAGVVLFNYL 378
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: A0A0L8GDL7_OCTBM (TPT domain-containing protein (Fragment) n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8GDL7_OCTBM) HSP 1 Score: 92.8 bits (229), Expect = 1.180e-17 Identity = 65/227 (28.63%), Postives = 123/227 (54.19%), Query Frame = 1
Query: 1 VGTSALGLQAMEVGVHTMVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHPFTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLY 681
+G S + + V ++TM +S+ +F+L FS+ L++FR L+VVV +SGG+ L H EF ++GF+L + + L+G++WTL+Q+++Q G+ + + HI P+ ++ + LS+S + S +F ++ K + +ILA + + EF I SSL+L + G+ KE++++ ++ + G+ +S AVGF I + G+ +
Sbjct: 10 IGMSNWSFEYITVSLYTMSKSSTVLFILGFSLLFRLEKFRPSLLVVVLFISGGLFLF-----TYHSTEFNLIGFILVMTATFLSGLRWTLTQLVVQKEGLGLRNPLDMMFHIEPWMIISLLPLSASFEGLRIVSTKQFFRYEHISVAL------KNCGWALIGAILAFFMEIAEFLLISNTSSLTLSIAGIFKEIIVLFLAAEINGDHISILNAVGFIICLCGMCFH 225
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: A0A1X2HQC5_SYNRA (Triose-phosphate transporter family-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HQC5_SYNRA) HSP 1 Score: 91.7 bits (226), Expect = 1.290e-17 Identity = 66/232 (28.45%), Postives = 123/232 (53.02%), Query Frame = 1
Query: 52 MVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHP--FTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLYKLMPKGPPQGGNTGQYEAMP 741
MV+S+ PI+VLLFS GL++ R+ LV ++ ++ GV L G E +F M+GF+L L++ +++G++W L+QVLLQ + A H+ P F + +SL + F + F N+ + E+F L+ LAL + + E IK ++++L + G+ KE++++ +SV + G+ L+ + +G ++++G++ Y + QY +P
Sbjct: 1 MVKSSTPIWVLLFSFLFGLEKPRLVLVAIIGLMVAGVILTVEG-----ETKFDMLGFVLVLVAAVISGLRWNLTQVLLQQDRLGMDNPIATLYHLSPIMFVTMLLLSLIFEDPIDQFRQSQHFDNIFHILESFG---------LMAIGGFLALAMTLAELYLIKNTNTITLSVAGISKEIVIITLSVLIYGDVLTPKNLLGLFVSIIGIIAYNYYKLSKSHQADNAQYHMIP 218
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: A0A433P900_9FUNG (Triose-phosphate transporter family-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433P900_9FUNG) HSP 1 Score: 93.6 bits (231), Expect = 1.600e-17 Identity = 67/227 (29.52%), Postives = 123/227 (54.19%), Query Frame = 1
Query: 7 TSALGLQAMEVGVHTMVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHP--FTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLY 681
T+ L + + +TMV+S+ PI+VLLF+ G GL+ R+ L+ ++ V+ GV L +G E F + GF L L++ +++G++W+L+Q+LLQ G+ A ++ P F + MSL + F ++ F AETF L+ +LA + + EF IK S+++L + G+ KE++++ +SV + G+ L+ +G +++ G++ Y
Sbjct: 82 TANASLVYITLSFYTMVKSSTPIWVLLFAFGFGLERPRLQLISIIVVMVIGVILTVAG-----ETAFNLTGFFLVLIAAIVSGLRWSLTQMLLQADGLGMDNPVATLYYLSPIMFVFMSIMSLLFEDPVAQFRNSEHFDGWFTAAETFG---------LMGIGGLLAFAMTIAEFYLIKSTSTITLSVAGISKEIVIISLSVLIYGDKLTPVNLLGLFVSIAGIIAY 294
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: A0A7R9TXT7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TXT7_9VIRI) HSP 1 Score: 94.0 bits (232), Expect = 3.970e-17 Identity = 68/229 (29.69%), Postives = 129/229 (56.33%), Query Frame = 1
Query: 1 VGTSALGLQAMEVGVHTMVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQ-VHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHPFTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLYK 684
+G S + L+ + + +T++++ P+ + L S MG+++ R ++VV + GVAL+ G ++ E +FP+ G +L +++ L+G++WTL+QV+L K + + HP L++ + S +AT+ F +L + + + + ALL+ A +AL + TEF+ + S++SL ++GV KE+LL++ +V +LG+ VG S+ + GV LYK
Sbjct: 173 IGVSNVALRTISLSSYTIIKAASPLGIALASFAMGVEKLRCETLLVVGAICAGVALVMVGVKENSEENDFPVTGMVLAVVAMALSGVRWTLTQVMLH------KEELGLS---HPIALLNALLPSMTATV--FVLSLGTESYAALETNLLFDLLFAAALLLSA--FIALAMTSTEFALVATTSAISLGIVGVCKEVLLIVAAVILLGDPFGLLNMVGLSLVVSGVFLYK 388
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: I0YV78_COCSC (TPT-domain-containing protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YV78_COCSC) HSP 1 Score: 92.8 bits (229), Expect = 5.050e-17 Identity = 67/230 (29.13%), Postives = 119/230 (51.74%), Query Frame = 1
Query: 1 VGTSALGLQAMEVGVHTMVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQA---VRDHIHPFTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLY 681
+G S L + + +TM +ST P+F+L F G++ L VV V+S G+ LL +G E +F + GF++ +++ L+G++WT++QVLLQG G + + + V +MSL + + F +L+ +A T +L++ +A ++ TEF+ I + S+L+ + G KE++ V+ +V LGES S VG + ++GV L+
Sbjct: 82 IGLSNFSLSLITLSFYTMCKSTTPVFLLGFCFLWGIERPSWNLAAVVLVISCGLGLLVAG-----ETDFNLAGFVIVMVASALSGLRWTITQVLLQGNDAHGTGESTLPLIYRQVMMSITVAFMSLVIERLWIVLPGSPYFDSLQSLATT---------TMLMLFGGTIAFFMVWTEFTVIAETSALTFMVAGTFKEIVTVMAAVTFLGESFSFINGVGLVVLIMGVALF 297
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Match: A0A162RA94_MUCCL (TPT domain-containing protein n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A162RA94_MUCCL) HSP 1 Score: 89.7 bits (221), Expect = 8.370e-17 Identity = 64/232 (27.59%), Postives = 122/232 (52.59%), Query Frame = 1
Query: 52 MVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGQRQVHEYEFPMVGFLLTLLSGMLAGMKWTLSQVLLQGRGIFGKVDQAVRDHIHP--FTLVHYMSLSSSATLVPFASALEFSNLRDMAETFSAERMVKTALLIVACSILALVLIMTEFSFIKKVSSLSLCMIGVVKELLLVLVSVAMLGESLSRRTAVGFSITMVGVVLYKLMPKGPPQGGNTGQYEAMP 741
MV+S+ PI+VLLFS G + R+ LV ++ V+ GV L G E +F VGF L L++ +++G++W+++Q+LLQ + A ++ P F + +SL L F + F + + E+F L+ +LA + + E IK ++++L + G+ KE++++++SV + G+ L+ + +G ++++G++ Y G GQY+ +P
Sbjct: 1 MVKSSTPIWVLLFSFMFGFERPRLLLVAIIVVMVAGVILTVEG-----ETKFDPVGFALVLIASIVSGLRWSMTQLLLQHENMGISNPIATLYYLTPVMFVTMFTLSLVFEHPLDQFQHSKHFDTVSHIIESFG---------LMSIGGLLAFAMTLAELYLIKSTNTVTLSVAGISKEIVVIMLSVMIYGDVLTPKNVLGLLVSIIGIIAYNYYKLSKKNGSEKGQYQMIP 218 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig109.781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig109.781.1 >prot_D-herbacea_F_contig109.781.1 ID=prot_D-herbacea_F_contig109.781.1|Name=mRNA_D-herbacea_F_contig109.781.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=313bp MEVGVHTMVRSTVPIFVLLFSVGMGLQEFRVGLVVVVFVVSGGVALLFSGback to top mRNA from alignment at D-herbacea_F_contig109:723832..733087- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig109.781.1 ID=mRNA_D-herbacea_F_contig109.781.1|Name=mRNA_D-herbacea_F_contig109.781.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=9256bp|location=Sequence derived from alignment at D-herbacea_F_contig109:723832..733087- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig109:723832..733087- >mRNA_D-herbacea_F_contig109.781.1 ID=mRNA_D-herbacea_F_contig109.781.1|Name=mRNA_D-herbacea_F_contig109.781.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1878bp|location=Sequence derived from alignment at D-herbacea_F_contig109:723832..733087- (Desmarestia herbacea DmunF female)back to top |