mRNA_D-herbacea_F_contig1077.699.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 528 bits (1360), Expect = 3.840e-182 Identity = 267/434 (61.52%), Postives = 321/434 (73.96%), Query Frame = 1
Query: 100 EDGGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAP-EASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGNLFTGTSRLEFNDSGDTVWTSNTFEDADSDLCYKNIAS 1398
E GC T+TDLYN R+ESDG + KGPI+ LDD+ + + +P ++ KWLLT++L I G++FYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+PQ Y GRSF+NCVSE + E C GQ QN+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT +GG AAGIFLHRSSD V+DN+VHDMQ AGMA++ES +ADI++N FS+VK+GIR+S+G N+V+ N+F+D S G++TYQGSD P + SDGRPSDN +N N GVKIKEGD+ IT N+FTGTS LEF D+ +T W NT +C KNI S
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 9.960e-177 Identity = 257/440 (58.41%), Postives = 319/440 (72.50%), Query Frame = 1
Query: 46 KASTRWASGTGLNGRIYLEDGGCGTMTDLYNSR-VESDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGNLFTGTSRLEFNDSGDTVWTSNTFED 1362
+ S R+A+ +G+ GR+Y E GC TMTDLYN R E+DG + KGP+Y+LDD+ + P+ +T WLL ++L+I G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ YENGRSF+NCVSE + + CEG +N+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GG+ AAGIFLHRSSD V+DN + +MQ AG+A++ESFDA I+ N + KYGIR+S+G G+N VY N F D S+YG++TY+GSD P+ S DGRPS N + N+ + GVKIKEGD+N N F EF +S +T+W+ N D
Sbjct: 427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD 864
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 483 bits (1243), Expect = 2.840e-165 Identity = 245/443 (55.30%), Postives = 307/443 (69.30%), Query Frame = 1
Query: 100 EDGGCGTMTDLYNSR-VESDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGNLFTGTSRLEFNDSGDTVWTSNTFEDADSDLCYKNIAS 1398
E GC T+TDLYN R E+DG + KGP+Y+LD + + +PT+VT KWLL ++L++ G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ YE GRSF+NCVSE + ETC+G +ND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +A +GG A GIFLHRSSD+ EVY N + +M AG+A++ESF+ADIHDN V++GIR+S+G G N+VY+N F+DCS++G++TY GSD P+ S+ GRP+ N +N +N+ GVK K DN +T N FTGT LEF D+ T W+ N+ S +C NI S
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITS 443
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 465 bits (1197), Expect = 1.430e-158 Identity = 230/432 (53.24%), Postives = 296/432 (68.52%), Query Frame = 1
Query: 100 EDGGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGNLFTGTSRLEFNDSGDTVWTSNTFEDADSDLCYKNI 1392
+ GGC T++DLY + + KGP+++LD ND + + T TGKWLLT+DLF+ G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + PQ+ Y++GRSFI CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA +GG+ AAGIFLHRS D EVY N + +M AG+A++E+ DIHDN ++GIR+ +G +N V++NVF + G+FTY GSD P GRP DN Y+N T+TGVKIKE DN +IT N F+GT+ +EFN++ D VW+ N+ ++ C ++I
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIP---TNTCLEDI 431
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 426 bits (1095), Expect = 1.740e-144 Identity = 209/348 (60.06%), Postives = 252/348 (72.41%), Query Frame = 1
Query: 121 MTDLYNSR-VESDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSE 1137
MTDLYN R E DG + KGP+Y+LDD+ + P+ +T WLL ++L+I G +FYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ YE GRSF+NCVSE + + CEG +N+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT +GG+ A GIFLHRSSD V+DN + +MQ AG+A++E+FDA I+ NT + KYGIR+S+G G+N VY N F D S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 406 bits (1044), Expect = 1.400e-136 Identity = 225/405 (55.56%), Postives = 268/405 (66.17%), Query Frame = 1
Query: 184 ILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGNLFTGTSRLEFNDSGDTVWTSNTFEDADSDLCYKNIAS 1398
+LDD+ + + SPT+VT KWLL S+L++ G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ YE GRSF+NCVSE + ETC+G+ +ND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG +A GIFLHRSSD+ EVY G DAP+ S+ GRP+ N +N +NT GVKIK DN I+ N FTGT LEF D+ T W+ N+ S +C N+ S
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTS 346
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 408 bits (1048), Expect = 1.660e-133 Identity = 218/432 (50.46%), Postives = 284/432 (65.74%), Query Frame = 1
Query: 94 YLEDGGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEA-SSDGRPSDNNIYDNIFSNT---KTGVKIKEGDNNNITGNLFTGTSRLEFNDSGDTVWTSNT 1353
Y E GGCGT+T +Y ++ E DG P+Y+LD+N+D++ TG WLL +L ++ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N ++ +GRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+ +GG A GIFLHRSSD EV+DN+V++MQ AGMA+MES+DA+I+DN+F+N +YGIR+S+G G N + NN+F ++YG++TY GSD P+ +S+GRPSDN ++D T GV IKEGD+N N+FTG S EF DS DT W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGGTP--TGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDN-VFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 409 bits (1052), Expect = 1.460e-131 Identity = 224/441 (50.79%), Postives = 281/441 (63.72%), Query Frame = 1
Query: 85 GRIYLEDGGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIF-SNT-KTGVKIKEGDNNNITGNLFTGTSRLE---FNDSGDTVWTSNTFEDADSDLCYK 1386
G+ Y+ GGC T+TD+Y ++ G GP+++LD ND+++ + TG WLL D+ + GS+ G GGD LRIQSTGS D++E+RGHGGSL F +T VTSWDT K +Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA +GG A GIFLHRSSD CEV+ N V+DM+ AGMAIMES A IHDNTF+NVKYGIR+SVG N V NN F +C +YG++TYQG+D PEAS D D + DN F +NT + GVKI++ + T N F S E F D D VWT+N D D+C K
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDW---DGLLVDNTFHANTVEGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLK 827
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 382 bits (980), Expect = 7.300e-121 Identity = 211/445 (47.42%), Postives = 265/445 (59.55%), Query Frame = 1
Query: 106 GGCGTMTDLYNSRVESDGWTPKGPIYILDDNDDIMYS---PTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEYESDE--TCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGM------------------------AIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEAS-SDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGNLFTGTSRLEFNDSGDTVWTSN 1350
GGC T+TD+YN++ S GP+Y+LD +++I+ + TG WLLTS L IL G Y GTS GGD D LRIQST DF E+RG GGSL F T VTSWDT + +YE GRSFINCV++++ + +C G+ + GECRMDIIDS MG +GWFD+ESYGLTWKVRG C+D SN E+ D NVYGDIK S+I+ MYYGMYSYGHQGGVWT+N M DN YGFDPHDDSD LTIA G+ GI + ++ E+Y A+MESF A+I+DNT N KYGIR+S+G N++++N FD S YG++TY+GSD P+ S +DGR DN+ N SNT +KIKEGD+N+ T N+F EF DS DTVWT+N
Sbjct: 413 GGCATLTDMYNTQSGS------GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 367 bits (941), Expect = 4.760e-119 Identity = 198/416 (47.60%), Postives = 250/416 (60.10%), Query Frame = 1
Query: 76 GLNGRIYLED-------GGCGTMTDLYNSRVESDGWTPKGPIYILD-DNDDIMYSPTNVTGKWLLTSDLFILRGSIFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYENGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNIVHDMQAAGMAIMESFDADIHDNTFSNVKYGIRISVGGGSNNVYNNVFDDCSEYGVFTYQGSDAPEASSDGRPSDNNIYDNIFSNTKTGVKIKEGDNNNITGNLF 1293
G R+YLE GGC T+ ++ SR KGP+Y +D D+ ++ T+ TG WLLT +L++ G G+ GGD DELR+ ST T F +R HGGSL F +T V SWDT SP +D +GRS+I+ +SE + DETCEG +N GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G +AGIFLHRSSD V N VHD AG+A++ESF+AD+ +NTF N KYG+R SVG N NN + +EY ++Y G+D P+ S GR +N N FS + +KIKE D N+F
Sbjct: 50 GTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 455 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1077.699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1077.699.1 >prot_D-herbacea_F_contig1077.699.1 ID=prot_D-herbacea_F_contig1077.699.1|Name=mRNA_D-herbacea_F_contig1077.699.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=461bp MTIPDTCTGTKASTRWASGTGLNGRIYLEDGGCGTMTDLYNSRVESDGWTback to top mRNA from alignment at D-herbacea_F_contig1077:42038..44678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1077.699.1 ID=mRNA_D-herbacea_F_contig1077.699.1|Name=mRNA_D-herbacea_F_contig1077.699.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=2641bp|location=Sequence derived from alignment at D-herbacea_F_contig1077:42038..44678- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1077:42038..44678- >mRNA_D-herbacea_F_contig1077.699.1 ID=mRNA_D-herbacea_F_contig1077.699.1|Name=mRNA_D-herbacea_F_contig1077.699.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2766bp|location=Sequence derived from alignment at D-herbacea_F_contig1077:42038..44678- (Desmarestia herbacea DmunF female)back to top |