mRNA_D-herbacea_F_contig107.681.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A6H5KVD5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVD5_9PHAE) HSP 1 Score: 776 bits (2004), Expect = 1.180e-271 Identity = 426/508 (83.86%), Postives = 450/508 (88.58%), Query Frame = 2
Query: 107 PPPRGVNAHYAIAAVAITVLINRRKDIKLIPTLFQRNGGKTRKMLIGTAGIFVFEQIVRKALQKAGLKLPSSLVSMVCAFILLKGYEAGSSKEDADKVANYFGPAVEHLGKWMPLYLAPPLIVLPNALSEVQGAAMWARLGGVHVAGWILSILSTAAIAKAAQNTGNSAA----DSGSEAD-DCRAVADPVPAEPAGVGQEQ----DEPAPGGGVDTG----GDGGQKKVKSKEEKAADMRKAWAVITAATYALLPWCKEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTIWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGVYGASVGTAVLDAMGVSRDNIVPRGIAMGASAHSIGTAALMGDEPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVLALDR 1591
P PRG++AHYAIAAVA+TVLINRRKD+KLIP L Q NGGKT+KMLIGT GIFVFEQIVRKAL KAG+KLPSSLVSMV AFILLK YE+ KE+ADKVA+YFGPAVEHLGKWMPLYLAPPLIVLPNAL+EV+GAAMWARLGGVHV GW LSILSTAA+AKA QN +++ +SG+ D A+ VPAEP G Q+ D GGG DT G+ G KVKSKEEKAADMRKAWAVITAATYALLPWC+EGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAAR L LK ALEGYFPKAGM+SGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLAST+WSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGVYGASVGTAVLDAMGV DN+VPRGIAMGASAHSIGTAALM EPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVLALDR
Sbjct: 3 PRPRGIDAHYAIAAVAVTVLINRRKDLKLIPGLLQPNGGKTKKMLIGTGGIFVFEQIVRKALAKAGIKLPSSLVSMVLAFILLKAYESSKGKEEADKVADYFGPAVEHLGKWMPLYLAPPLIVLPNALAEVKGAAMWARLGGVHVVGWALSILSTAAVAKATQNASDASKPPSEESGAGGDVSTGGSAESVPAEPVGGVQDAAAAGDMSGEGGGYDTSVAAAGEEGGAKVKSKEEKAADMRKAWAVITAATYALLPWCEEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARDLPLKTALEGYFPKAGMVSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTLWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGVYGASVGTAVLDAMGVGSDNLVPRGIAMGASAHSIGTAALMEREPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVLALDR 510
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A835YPB8_9STRA (LrgB-like family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB8_9STRA) HSP 1 Score: 417 bits (1073), Expect = 6.850e-132 Identity = 247/511 (48.34%), Postives = 310/511 (60.67%), Query Frame = 2
Query: 122 VNAHYAIAAVAITVLINRRKDIKLIPTLFQRNGGKTRKMLIGTAGIFVFEQIVRKALQKAGLKLPSSLVSMVCAFILLKGYEAGSSKEDADKVANYFGPAVEHLGKWMPLYLAPPLIVLPNALSEVQ--GAAMWARLGGVHVAGWILSILSTAAIAKAAQNTGNSAADSGSEADDCRAVADPVPAEPAGVGQEQDEPAPGGGVDTGGDG----------------------GQKKVKSKEEKAADMRKAWAVITAATYALLPWCKEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTIWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGVYGASVGTAVLDAMGVSRDNIVPRGIAMGASAHSIGTAALMGDEPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVLA 1582
V A+AAVA TVL+ R IK IP L Q N G TRKMLIG I+ +EQ KALQK GL LPSSL+SM+ F+LL Y A + AD VA Y PAV+HLGKWMPLYL PPL+ LPNA++++ GAAMWA+LGG+HV GW+ ++ STAAIA + K+KEEK R+AW VITAA++ + P+ PA STTV +LL NALP K ++HPLV CS++T + LG + GL+ AL YF K G+ GGAGD FFG+L+A CCALG RM+ +R L N PLLAS++ ++ SLFGT AA GA +TP+L+ TL QRSVMSSLGI A+ +LGGN +AVASIL+TG+YGAS G +LD MG ++D I+PRGIA GASAHSIGTAAL+ DEP+A A++SV+LCL G+FHTA+C+ P Q LR LA
Sbjct: 11 VRLQVALAAVAATVLVQNRHAIKYIPVLLQPNKGNTRKMLIGIGIIYAYEQACAKALQKLGLALPSSLISMISIFVLLNAYAAAAGDAAADAVAEYLRPAVDHLGKWMPLYLTPPLVTLPNAVADLGPCGAAMWAKLGGIHVVGWLATLSSTAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPRAKTKEEK---FREAWGVITAASFVIAPFYSSSPAMFSTTVAALLKGNALPARTKAVVHPLVTCSVVTAVVAAVLGRSEGLTTSGALAAYFTKRGIACGGAGDAFFGLLSACCCALGVRMYVSRRTLFDNAAPLLASSLLAASLSLFGTTAACGAARVTPKLTFTLAQRSVMSSLGISASQILGGNAGMAVASILLTGIYGASFGKTLLDKMGYTKDRIIPRGIATGASAHSIGTAALLEDEPDAGAISSVSLCLTGVFHTALCSIPAVQFALRKLA 518
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A7S2RL00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL00_9STRA) HSP 1 Score: 267 bits (683), Expect = 5.920e-76 Identity = 182/458 (39.74%), Postives = 253/458 (55.24%), Query Frame = 2
Query: 224 KTRKMLIGTAGIFVFEQIVRKALQKAGLKLPSSLVSMVCAFILLKGYEAGSSKEDADKVANYFGPAVEHLGKWMPLYLAPPLIVLPNAL---SEVQGAAMWARLGGVHVAGWILSILSTAAIAKAA---QNTGNSAADSGSEADDCRAVADPVPAEPAGVGQEQDEPAPGGGVDTGGDGGQKKVKSKEEKAADMRKAWAVITAATYALLPWCKEGPAAVSTTVLSLLHAN----ALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTIWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGVYGASVGTAVLDAMGV-SRDNIVPRGIAMGASAHSIGTAALMGDEPEAAAVASVALCLAGIFHTAVCAAPPAQR 1564
K K + A I++ E+ V + L KA LK+PSSL +M+ LK E S AD +A + P V LGKWM L+L PPL +LP A+ ++ A W RL +H GW++S+L ++A+AKA Q +EA + ++ PA G+ E P + W I AA Y L PA +TT+ +++ A +LP V + HPLVV +++TG + + A G+ + + Y G + GGAGD ++N + ALG RMF R IL +N +PL A ++ SLFGTAAAAG L P L + L+QRSVMS+LG+ A++LG +P LAVASIL+TGVYGA++G LD +G+ S + V RG+ MGAS+H+IGTA+LM EPEAAAV+SV+LCL GI HTAV + P QR
Sbjct: 32 KLAKKVAAIAAIYLVEKGVAQGLNKAKLKIPSSLATMLLWLGGLKAVEQFHSAHAADSIAAHLSPGVGFLGKWMTLFLTPPLTMLPVAIKRNAKGTSAQSWQRLVLIHAVGWVVSVLVSSALAKALSRRQEGDEEEVKEAAEASEAGTRSEEARTPPAAPGRAAPEEDP------------------------LLSNWVKIAAAAYMLQSTVGRKPAFAATTITAIIAAQKANPSLPKPVGSVAHPLVVAAIVTGVSLFLSAKAHGIPPEQLFDEYMNGKGPIGGGAGDAVAALMNGAVSALGIRMFQARAILEENWQPLAAGASAVALVSLFGTAAAAGYSELPPPLGLALSQRSVMSALGMAGANMLGASPNLAVASILLTGVYGAALGGGFLDWLGLKSPKDAVSRGVVMGASSHAIGTASLMAREPEAAAVSSVSLCLTGIVHTAVLSIPAVQR 465
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A7S4D6V3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6V3_HETAK) HSP 1 Score: 256 bits (655), Expect = 2.490e-74 Identity = 155/283 (54.77%), Postives = 189/283 (66.78%), Query Frame = 2
Query: 746 QKKVKSKEEKAADMRK---AWAVITAATYALLPW-CKEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTIWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGVYGASVGTAVLDAMGVSRDNIVPRGIAMGASAHSIGTAALMGDEPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVLA 1582
Q+ K E AA R+ AW +TA + +LP + PA +TTVLSL+ +LP GV K+LHPLV C IT A+ LG G+ + AL+ YF G+ + G GDLFFG+LNASCCALG RMF +R L NL L+ +T +SSM SLFGT AG GL ++S+ L+QRSVMSSLGI A LLG +PAL VASILVTGVYGASVG +L G + RG+AMGA+AHSIGTAALM EPEA A++SVALCLAGI HT VCA P Q +L+ LA
Sbjct: 12 QRHSKGGECPAARRRRLLRAWRAVTAFAFLVLPTRAGKNPALFATTVLSLVGGQSLPKGVTKVLHPLVTCGAITSIAAIALGRLEGMDREKALQDYFRNQGLGNLGPGDLFFGLLNASCCALGVRMFNSRRTLEANLPTLVGATAFSSMLSLFGTTWVAGRAGLPEKVSLMLSQRSVMSSLGIGGAQLLGASPALTVASILVTGVYGASVGKDLLAKFGAPPSAPLVRGLAMGATAHSIGTAALMEGEPEATAISSVALCLAGIIHTFVCAVPSVQNVLKGLA 294
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A7S2UXS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS0_9STRA) HSP 1 Score: 256 bits (653), Expect = 2.800e-73 Identity = 140/273 (51.28%), Postives = 190/273 (69.60%), Query Frame = 2
Query: 773 KAAD----MRKAWAVITAATYALLPWCKEGPAAVSTTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTIWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGVYGASVGTAVLDAMGVSRDNIVPRGIAMGASAHSIGTAALMGDEPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVL 1579
KAAD +R+AW+V+TA +Y LLP PA +T+L+LL ALPP + ++LHPL+ +T G + LGA +S K +L+ YF G G+GD FF +L+ SC ALG RMFY R+ L +NL LL ST +SSM SLFGTAAAAGA+G+ +L++ LTQRSV + LG+ A LG +PAL VASIL+TG+YGAS+G ++L +G + V RG AMGA++H+IGTA+LM DEP+AAA++SVAL LAG+ H+ VC+ P AQ L+ +
Sbjct: 79 KAADTQQRLRRAWSVLTAISYVLLPVAGRQPATFCSTILTLLWGKALPPKISQVLHPLITAGALTSGVTTSLGALDAMSQKDSLQEYFRNTGFTGMGSGDAFFSLLSCSCTALGLRMFYARNTLQENLPTLLGSTAFSSMLSLFGTAAAAGALGMDDKLALMLTQRSVSTPLGLAGARDLGASPALTVASILITGLYGASLGKSLLSTLGFGVEKAVSRGAAMGANSHAIGTASLMQDEPKAAAISSVALALAGVIHSVVCSLPAAQATLKTM 351
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A7S2HKZ1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HKZ1_9STRA) HSP 1 Score: 241 bits (614), Expect = 8.670e-67 Identity = 177/444 (39.86%), Postives = 249/444 (56.08%), Query Frame = 2
Query: 290 LQKAGLKLPSSLVSMVCAFILLKGYEAGSSKEDADKVANYFGPAVEHLGKWMPLYLAPPLIVLPNAL---SEVQGAAMWARLGGVHVAGWILSILSTAAIAKAAQNTGNSAADSGSEADD--CRAVADPVPAEPAGVGQEQ-DEPAPGGGVDTGGDGGQKKVKSKEEKAADMRKAWAVITAATYALLPWCKEGPAAVSTTVLSLLHANAL-PPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKNLRPLLASTIWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGGNPALAVASILVTGVYGASVGTAVLDAMGVSR-------DNIVPRGIAMGASAHSIGTAALMGDEPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVL 1579
L KA K+PSSLVSM+ LK E +E AD ++ PAV +LGKWM L+L PPL++LP A+ ++ A WA+L +H AGW+LS +++AA+A A + A + S D C + + A+ + + DE AP GG G E+++ ++ W + A+ AL P A +TT +L+ A L PP K+ HP+VV + T RG+SL L Y GAGDL +LNAS +LG RM+ ILS+N +PL+ ++ + + SLFGTA AG L LS L QRSVMS LG+ A +LG + +LAVA IL+TGVYGA+ G+ ++D +GV +N + RG AMG+SAH+IGTAAL+ +EPEAAAV+SVALCL GI H A+ ++L++ L
Sbjct: 2 LAKANSKIPSSLVSMLLWLGGLKVIERVKGREQADLISQSLTPAVGYLGKWMTLFLTPPLVMLPVAIRRDAKGTAATTWAKLLVIHCAGWVLSCVTSAAVAYALNKRRDVIAVTISSNSDKECLSKSPSSAADVTALSLDSGDEDAPNGG-------GVAAPPEIEDRSLEI---WLKVAVASLALNKTVGLQPLAFATTTSALIGAKQLLPPAATKVFHPIVVAAAATWAVLGATALERGVSLDSILTQYMRPE---KTGAGDLLNLLLNASVSSLGIRMYSQWPILSENWKPLVGASSFGAFLSLFGTAWVAGKAKLPENLSYPLVQRSVMSGLGMSGAKMLGASESLAVAGILITGVYGATFGSKLMDYIGVKAQPKQVPDNNSIVRGAAMGSSAHAIGTAALLSEEPEAAAVSSVALCLTGIVHIALLTNSSTRQLVQKL 432
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A7S2PPB5_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PPB5_9DINO) HSP 1 Score: 183 bits (465), Expect = 3.860e-46 Identity = 174/515 (33.79%), Postives = 251/515 (48.74%), Query Frame = 2
Query: 125 NAHYAIAAVAITVLINRRKDIKLIPTLFQRNGG--KTRKMLIGTAGIFVFEQIVRKALQKAGL-KLPSSLVSMVCAFILLKGYEAGSSKEDADKVANYFGPAVEHLGKWMPLYLAPPLIVLPNALSEVQ--GAAMWARLGGVHVAGWILSILSTAAIAK--AAQNTGNSAADSGSEADDCRAVADPVPAEPAGVGQEQDEPAPGGGVDTGGDGGQKKVKSKEEKAADMRKAWAVITAATYA------LLPWCKEGPAAV----STTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDIL---SKNLRPLLASTIWSSMTSLFGTAAAAGA----VGLTPRLSMTLTQRSVMSSLGIPAASLLGG--NPALAVASILVTGVYGASVGTAVLDAM-GVSR-DNIVPRGIAMGASAHSIGTAALMGD-EPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVLA 1582
NA A A VL+ R KD + IP L G KT M I+ +E++V L++ GL ++PS+L +M+ F L+ KE ++KVAN P V+ LGKWM L+LAPPL+ L ++ + G +WA + GW + A+A A +GNS S + VA PA G+ DE V E +R+AW V+ A Y +LP P + STTV + + LP +++LHPLV+C++ + AS +G A YF G GD F L A+ LG RM+ D ++ + +L + S SL T+ AA A + + P LS+ + RSVMS+LGI + +G +P LAVASIL+TG GAS+G A+L A GV + ++ + RG++MG SAHSIGTA L+ D + +AAA++ ++CLAG HT V P +R LA
Sbjct: 2 NARTVAGAAAAIVLLARIKDARHIPRLVLDQGSPSKTLVMWSSALAIYGYEKLVAAILRRLGLTRMPSTLAAMLSLFAGLRAQHKLLGKESSEKVANLLRPGVDFLGKWMGLFLAPPLVSLDASIKALPPYGQGVWANAVALLGTGWTATHAVAGAVASSLAPSKSGNSQKMS-------QTVASTAPAIAVNGGKRHDE-----------------VPLDEA----VRRAWVVLGAVGYLGVACAPMLPGQLHRPVGMLCELSTTVGAFALSKLLPDKAQRVLHPLVICAVTSNLASRNVGPA---------APYFDSGR----GVGDRLFQWLPAAVTGLGVRMYSTTDKWLDRPEDFKVVLGTCAASGCFSLLWTSVAAVAPQSPLSVPPPLSLPMLHRSVMSALGIEGSWAVGPECDPKLAVASILITGCIGASLGNALLAACPGVFKGESALVRGVSMGCSAHSIGTAGLISDGDTDAAAISGASMCLAGTMHTLVLNLPGVVPGIRALA 475
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A813LVX0_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LVX0_POLGL) HSP 1 Score: 179 bits (453), Expect = 1.730e-44 Identity = 162/516 (31.40%), Postives = 252/516 (48.84%), Query Frame = 2
Query: 140 IAAVAITVLINRRKDIKLIPTLFQRNGG--KTRKMLIGTAGIFVFEQIVRKALQKAGL-KLPSSLVSMVCAFILLKGYEAGSSKEDADKVANYFGPAVEHLGKWMPLYLAPPLIVLPNALSEVQ--GAAMWARLGGVHVAGWILSILSTAAIAKAAQNTGNSAADSGSEADDCRAVADPVPAEPAGVGQEQDEPAPGGGVDTGGDGGQKKVKSKEEKAA-------DMRKAWAVITAATYA------LLPWCKEGPAAV----STTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDI-LSK--NLRPLLASTIWSSMTSLFGTAAAA----GAVGLTPRLSMTLTQRSVMSSLGIPAASLLG--GNPALAVASILVTGVYGASVGTAVLDAMGV---SRDNIVPRGIAMGASAHSIGTAALMG-DEPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVLA 1582
+ A A VLI+R +D + +P LF G KT ++ IF +E+++ L++ GL ++PS+L +M+ F L+ + ++ +D++A + P V+ LGKWM L+LAPPL+ L +++ + +WA + V+GW + + A+A + VA P P P GG + G K+ ++A +R++W ++ A + LP P + STTV S A LP +++LHPLV+C++ + AS +G YF + G GD F L A+ LG RM+ + L K + R +LA+ +S S+ T A +GL L++ L RSVMS+LGI + +G +P LAVASIL+TG GAS+G A+L+A S ++V RG++MG SAHSIGTA L+ + EAAA++ ++CLAG HT V P +R LA
Sbjct: 12 VGAAAAIVLISRARDARHLPRLFLEKGSPVKTLQIWASALAIFGYERLIALTLRRLGLTRMPSTLAAMLTLFAGLRIVQKAKGRQQSDRLAEFLRPGVDFLGKWMGLFLAPPLVSLDASIARLPPYSGRVWANAVLLLVSGWGATHAAAGAVASSL-------------------VASKEPVAP-----------PAGGAEANGQQLAPAAKAAPQEAEVEVSQDEAVRRSWVLLGAIGFLGVSCSPFLPLVCHRPLGMLCEMSTTVCSFALAKLLPDAAQRVLHPLVICAVSSNLASRFVGPC---------APYFDEGS----GVGDRLFKWLPAAVTGLGVRMYNTTGLWLDKPEDFRVVLATCSFSGCFSVLITVLGAVNQLSPLGLPAPLALPLIHRSVMSALGIEGSQAVGPESDPKLAVASILITGCIGASLGNALLEACPAIFKSSSSLV-RGVSMGCSAHSIGTAGLISFGDTEAAAISGASMCLAGTVHTLVLQVPGVVAGIRALA 483
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A7S0ADI3_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ADI3_9DINO) HSP 1 Score: 172 bits (436), Expect = 4.890e-42 Identity = 162/516 (31.40%), Postives = 247/516 (47.87%), Query Frame = 2
Query: 125 NAHYAIAAVAITVLINRRKDIKLIPTLFQRNGGKTRKMLIGTAG--IFVFEQIVRKALQKAGL-KLPSSLVSMVCAFILLKGYEAGSSKEDADKVANYFGPAVEHLGKWMPLYLAPPLIVLPNALSEVQ--GAAMWARLGGVHVAGWILSILSTAAIAKAAQNTGNSAADSGSEADDCRAVADP-VPAEPAGVGQEQDEPAPGGGVDTGGDGGQKKVKSKEEKAAD--MRKAWAVITAATYA------LLPWCKEGPAAV----STTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKN-------LRPLLASTIWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGG--NPALAVASILVTGVYGASVGTAVLDAMGVSRDNIVP--RGIAMGASAHSIGTAALMG-DEPEAAAVASVALCLAGIFHTAVCAAPPAQRLLRVLA 1582
+A + A A VL++R +D + + L ++G T + I + I+ +E+ + L++ GL ++PS+L +M+ F L+ + G+ ++ +D +A P V+ LGKWM L+LAPPL+ L +++ + +W + AGW + AA+A + C+A P PA+ A + P +KE+ D +R+AW + A Y +LP P + STTV + + LP ++ILHPLVVC++ + AS +G YF AG G GD F L A+ LG RM+ + N L AS +S + + G AA + + LS+ L RSVMS+LGI + +G +P LAVASIL+TG GAS+G A+L+ M D P RG+AMG SAHSIGTA L+ + EAAA++ ++CLAG HT + P +R LA
Sbjct: 36 SARGLVGAAAAIVLLSRARDARHLTRLVLQHGSATETLRIWASALAIYGYERAIAALLRRLGLTRMPSTLAAMLSLFAALRATQKGAGRQTSDNLAKLLQPGVDFLGKWMGLFLAPPLVSLDASIAALPPYSRGVWGNTTALLGAGWAATHSVAAAVATSLVPRRA-----------CKARGAPSAPAQVASMAAPNAIAGP----------------TKEDVPQDEAVRRAWVFLGAIGYLGVSCFDVLPQPLHRPVGMLCEMSTTVSAFALSKLLPDAAQRILHPLVVCAVTSNLASRYVGHT---------APYFD-AGR---GVGDRLFQWLPAAVTGLGVRMYNTTGLWLDNADDFRCVLATCSASGCFSLLATSLGAVAAQSPLHVPAPLSLPLLHRSVMSALGIEGSQAIGPECDPKLAVASILITGCIGASLGNALLETMPTIFDASSPLVRGVAMGCSAHSIGTAGLISYGDTEAAAISGASMCLAGTAHTLLLQLPGVVPGIRALA 511
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Match: A0A812KFP5_9DINO (PLGG1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812KFP5_9DINO) HSP 1 Score: 174 bits (441), Expect = 6.440e-42 Identity = 157/499 (31.46%), Postives = 242/499 (48.50%), Query Frame = 2
Query: 137 AIAAVAITVLINRRKDIKLIPTLFQRNGGKTRKM--LIGTAGIFVFEQIVRKALQKAGL-KLPSSLVSMVCAFILLKGYEAGSSKEDADKVANYFGPAVEHLGKWMPLYLAPPLIVLPNALSEVQG--AAMWARLGGVHVAGWILSILSTAAIAKAAQNTGNSAADSGSEADDCRAVADPVPAEPAGVGQEQDEPAPGGGVDTGGDGGQKKVKSKEEKAADMRKAWAVITAATYA------LLPWCKEGPAAV----STTVLSLLHANALPPGVKKILHPLVVCSLITGGASYGLGAARGLSLKPALEGYFPKAGMLSGGAGDLFFGVLNASCCALGFRMFYNRDILSKN-------LRPLLASTIWSSMTSLFGTAAAAGAVGLTPRLSMTLTQRSVMSSLGIPAASLLGG--NPALAVASILVTGVYGASVGTAVLDAMGVSRDNIVP--RGIAMGASAHSIGTAALMG-DEPEAAAVASVALCLAGIFHTAVCAAP 1552
A+ A A VLI+R +D K +P L G + + L + I+ +E++V L+ G+ ++PS+L +M+ F+ L+G + +E A+++A+ P V+ LGKWM L+LAPPL+ L +++ + +WA + GW + + AA+A + S A ++ A PA D+P S++E +R++W ++ AA + LP P + STTV S A LP V+++LHPLV+C++ + AS +G YF + G GD F L A+ LG RM+ + N L AS +S + S + + P LS+ L RSVMS+LGI + +G +P LAVASIL+TG GAS+G A+L+A + P RG+AMG SAHSIGTA L+ + +AAA++ ++CLAG HT V P
Sbjct: 44 AVGAAAAIVLISRIRDAKHLPRLLLDKGSPDQSLHILASSLAIYGYERLVAMILRSLGMTRMPSTLAAMLSLFVALRGVQKLKDRETANRLADVLKPGVDFLGKWMGLFLAPPLVSLDASIARLPSYSGGVWANTSLLLGLGWGATHSAAAAVASSL------VPQSAKPATCATSMPAKFVAAPAKQVANGDKPV-----------------SQDEA---VRRSWVLLGAAGFLGMACSPALPLVLHRPLGMLCEMSTTVSSFALAKLLPDAVQRVLHPLVICAVSSNLASRFVGPT---------APYFDEGR----GVGDKLFQWLPAAVTGLGVRMYSTTPLWLDNAEDFKCVLATCSASGCFSILLSTIAAVNQKSPLAVPPPLSLPLLHRSVMSALGIEGSQAIGPECDPKLAVASILITGCIGASLGNALLEAFPAIFKSSSPLVRGVAMGCSAHSIGTAGLISLGDTDAAAISGASMCLAGTMHTLVLQVP 503 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig107.681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig107.681.1 >prot_D-herbacea_F_contig107.681.1 ID=prot_D-herbacea_F_contig107.681.1|Name=mRNA_D-herbacea_F_contig107.681.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=501bp MPALPPPPRGVNAHYAIAAVAITVLINRRKDIKLIPTLFQRNGGKTRKMLback to top mRNA from alignment at D-herbacea_F_contig107:568407..600283- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig107.681.1 ID=mRNA_D-herbacea_F_contig107.681.1|Name=mRNA_D-herbacea_F_contig107.681.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=31877bp|location=Sequence derived from alignment at D-herbacea_F_contig107:568407..600283- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig107:568407..600283- >mRNA_D-herbacea_F_contig107.681.1 ID=mRNA_D-herbacea_F_contig107.681.1|Name=mRNA_D-herbacea_F_contig107.681.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3006bp|location=Sequence derived from alignment at D-herbacea_F_contig107:568407..600283- (Desmarestia herbacea DmunF female)back to top |