mRNA_D-herbacea_F_contig1065.651.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: A0A6H5JMG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG7_9PHAE) HSP 1 Score: 164 bits (416), Expect = 4.050e-48 Identity = 72/116 (62.07%), Postives = 90/116 (77.59%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKYP 348
++YP GPSV F+K+FLD V+++ EYD AIIEWDVLV D SF LY AF E +W+KGS L GTNFH++A ++ MW VMGHINGNA+YNN DPAFAE+VDYT AR+K++YP
Sbjct: 136 DMYPKGPSVMFFKMFLDEGVRAELSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYP 251
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE) HSP 1 Score: 171 bits (434), Expect = 3.110e-47 Identity = 73/116 (62.93%), Postives = 90/116 (77.59%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKYP 348
+VYP GPSV FYK+FLD +++S F EYD AI+EWDVLV D SF LY AF E +W+KGS L GTNFH+++ MS MWHV+GHINGNA+YNNKD AF E+VDYT +RW++ YP
Sbjct: 120 DVYPRGPSVMFYKMFLDERIRSNFSEYDALAILEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNKDQAFVEYVDYTRSRWEYNYP 235
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI) HSP 1 Score: 168 bits (425), Expect = 4.970e-46 Identity = 70/115 (60.87%), Postives = 89/115 (77.39%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKY 345
NVYP GPSVQFYK+FL+ +K + E + A+IEWDVLV HD SF +LY AF E +W+KGS+LAGTNFH T ++ WH++GHINGNA+YNN DPAFA+FV++TLARW + Y
Sbjct: 30 NVYPKGPSVQFYKLFLEDTIKEKLERFGAIAVIEWDVLVAHDKSFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSY 144
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI) HSP 1 Score: 164 bits (416), Expect = 8.070e-45 Identity = 73/116 (62.93%), Postives = 89/116 (76.72%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKYP 348
+VYP GPSV F+K+FLD V ++ EYD AIIEWDVLV D SF LY AF E +W+KGS L GTNFH++A ++ MW VMGHINGNA+YNN DPAFAE+VDYT AR+K++YP
Sbjct: 52 DVYPKGPSVMFFKMFLDEGVHAELSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYP 167
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE) HSP 1 Score: 162 bits (409), Expect = 7.170e-44 Identity = 70/115 (60.87%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKY 345
NVYP GPSVQFYK+FL+ K + E + AI+EWDV V HD SF +LY AF E +W+KGSVLAGTNFH TA ++ W ++GHINGNA+YNN DPAFA+FV++TLARW + Y
Sbjct: 30 NVYPKGPSVQFYKLFLEDTFKEKLERFGAIAIMEWDVRVAHDKSFEKLYIAAFDVVEPFWVKGSVLAGTNFHGTATITDNWRMLGHINGNAIYNNSDPAFADFVEFTLARWGYSY 144
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.360e-43 Identity = 68/116 (58.62%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKYP 348
++YP GPSV FYK+FLD V+S EYD +I+EWDVLV D+SF LY AF E +W+KGS L GT+FH++A S MW V+GHINGNA+YNN DPAF E+V+YT ARW +++P
Sbjct: 108 DIYPKGPSVMFYKMFLDENVRSSLSEYDALSIVEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHP 223
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE) HSP 1 Score: 160 bits (405), Expect = 2.530e-43 Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKF 339
NVYP GPSVQFYK++LD V+ Q EYD AIIEWDV+V HD SF +LY AF E +WIKGS L G NFH T + HV+GHINGNA+YNN DPAF EFV+YTL RW++
Sbjct: 201 NVYPKGPSVQFYKLYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEY 313
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 159 bits (403), Expect = 4.730e-43 Identity = 68/116 (58.62%), Postives = 86/116 (74.14%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKYP 348
++YP GPSV FY +FLD V+S EYD +IIEWDVLV D+SF LY AF E +W+KGS L GT+FH+TA S MW V+GHINGNA+YNN DPAF E+V+YT +RW +++P
Sbjct: 111 DIYPRGPSVMFYNMFLDESVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRSRWGYEHP 226
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 157 bits (397), Expect = 3.060e-42 Identity = 67/116 (57.76%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 1 NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKYP 348
++YP GPSV FY +FLD V+S YD +IIEWDVLV D+SF LY AF E +W+KGS L GT+FH+ A MWHV+GHINGNA+YNN DPAF E+V+YT ARW +++P
Sbjct: 109 DIYPQGPSVMFYNMFLDESVRSSLSGYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHP 224
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.280e-41 Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 1
Query: 31 FYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYETAFHEGETYWIKGSVLAGTNFHNTAAMSSMWHVMGHINGNAMYNNKDPAFAEFVDYTLARWKFKYP 348
FYK+FLD +++S F EYD AIIEWDVLV D SF LY AF E +W+KGS L GTNFH+++ MS MWHV+GHINGNA+YNN D AF E+VDYT ARW+ YP
Sbjct: 2 FYKLFLDERIRSNFSEYDALAIIEWDVLVATDRSFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNNDQAFVEYVDYTRARWEDNYP 107 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1065.651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1065.651.1 >prot_D-herbacea_F_contig1065.651.1 ID=prot_D-herbacea_F_contig1065.651.1|Name=mRNA_D-herbacea_F_contig1065.651.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=116bp NVYPDGPSVQFYKIFLDPKVKSQFEEYDVFAIIEWDVLVVHDDSFTRLYEback to top mRNA from alignment at D-herbacea_F_contig1065:21912..26529- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1065.651.1 ID=mRNA_D-herbacea_F_contig1065.651.1|Name=mRNA_D-herbacea_F_contig1065.651.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=4618bp|location=Sequence derived from alignment at D-herbacea_F_contig1065:21912..26529- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1065:21912..26529- >mRNA_D-herbacea_F_contig1065.651.1 ID=mRNA_D-herbacea_F_contig1065.651.1|Name=mRNA_D-herbacea_F_contig1065.651.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=696bp|location=Sequence derived from alignment at D-herbacea_F_contig1065:21912..26529- (Desmarestia herbacea DmunF female)back to top |