mRNA_D-herbacea_F_contig1060.646.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1060.646.1
Unique NamemRNA_D-herbacea_F_contig1060.646.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 2.310e-73
Identity = 129/258 (50.00%), Postives = 178/258 (68.99%), Query Frame = 1
Query:    1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
            +L+FGTFNVRT A +G N IGH + T+++ C+A GCDVIGLQET+R G   I+  GY + +SG  +G K ++G HGVG+ IKE + +  GE+G T+ECI  RL+K R+ I ++  V FVV Y+PTE            K  +  AL+  +  V +R+++ VL DANARTG+R +G    D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+IL +QADRR VR V+V+R
Sbjct:   80 DLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKR 335          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 2.340e-73
Identity = 132/258 (51.16%), Postives = 182/258 (70.54%), Query Frame = 1
Query:    1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTE--EAPEG----QKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
            +L+FGTFNVRT A +G N IGH + T+++ C+A GCDVIGLQET+R G   I+  GY + +SG  +G K ++G HGVG+AIKE + +  GE+G T+ECIS RL+K R+ I ++  VTF+V Y+PTE     EG     K  +  AL+  +  V +R+++ VL DANARTG+R +G    D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+I  +QADRR VR V+V+R
Sbjct:  174 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFIFMRQADRRFVRNVSVKR 429          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 9.970e-71
Identity = 129/257 (50.19%), Postives = 177/257 (68.87%), Query Frame = 1
Query:    1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVR 747
            +L+FGTFNVRT A +G N IGH + T+++ C+A GCDVIGLQET+R G   I+  GY + +SG  +G K ++G HGVG+AIKE + +  GE+G T+ECIS RL+K R+ I ++  VTFVV Y+PTE            K  +  AL+  +  V +R+++ VL DANARTG+R +G    D+K++GAYGRD +N NG+ LLG A DN+L+L NT   TPK GV +TFQS+N+ K + RLD IL +Q DRR VR V+V+
Sbjct:   85 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYVQTPKGGVQHTFQSSNKGKEKYRLDLILMRQTDRRFVRNVSVK 339          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 1.280e-70
Identity = 131/258 (50.78%), Postives = 181/258 (70.16%), Query Frame = 1
Query:    1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
            +L+FGTFNV T A +G N IGH + T+++ C+A GCDVIGLQET+R+G   I+  GY + +SG  +G K ++G HGVG+AIKE + +  GE+G T+ECIS RL+K R+ I ++  VTFVV Y+PTE            K  +  AL+  +  V +R+++ VL DANARTG+R +G    D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+IL +QADRR VR V+V+R
Sbjct:  656 DLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKR 911          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 5.610e-70
Identity = 132/258 (51.16%), Postives = 179/258 (69.38%), Query Frame = 1
Query:    1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
            +L+FGTFNVRT A +G N IGH + T+++ CAA  CDVIGLQET+R G   I+  GY + +SG  +G K ++G HGVG+AIKE +    GE G T+ECIS RL+K R+ I ++  VTFVV Y+PTE A          K  +  AL+  +  V +R+++ VL DANARTG+R +G    D+K++GAYGRD +N NG+ LLG A DN+L+L+NT F TPK GV +TFQS+N+ K + RLD+IL +Q DRRLVR  +V+R
Sbjct:   89 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKR 344          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5J6W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6W7_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 2.660e-68
Identity = 125/258 (48.45%), Postives = 178/258 (68.99%), Query Frame = 1
Query:    1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
            +L+FGTFNVRT A +G N IGH + T+++ C+A GCDV+GL ET+R+G   I+  GY + +SG  +G K ++G HG+G+AIKE + +  GE+G T+ECIS RL+K R+ I ++  VTFVV Y+PTE            K  +  AL+  +  V +R+++ VL DANARTG+R +G    ++K++GAYGRD +N +G+ LLG A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+IL +Q DRR VR V+  R
Sbjct:   36 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVVGLHETRREGQGSIAHDGYVIIWSGARAGTKEKRGVHGMGIAIKEVMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CNAKIMGAYGRDIMNNSGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQTDRRFVRNVSDNR 291          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 9.380e-68
Identity = 118/233 (50.64%), Postives = 161/233 (69.10%), Query Frame = 1
Query:   73 TLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
            T+++ C+A GCDVIGLQET+R+G   I+  GY + +SG  +G K ++G HGVG+AIKE + +  GE+G T+ECIS RL+K R+ I ++  VTFVV Y+PTE            K  +  AL+  +  V +R+++ VL DANARTG+R   GG  D+KVLGAYGRD +N NG+ L G A DN+ +L NT F TPK GV +TFQS+N+ K + RLD+IL +QADRR VR V+V+R
Sbjct:    2 TVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKR 232          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.550e-67
Identity = 119/246 (48.37%), Postives = 167/246 (67.89%), Query Frame = 1
Query:    1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQA 714
            +L+FGTFNV T A +G N IGH + T+++ C+A GCDVIGLQET+R+G   I+  GY + +SG  +G K ++G HGVG+AIKE I +  GE+G T+ECIS RL+K R+ I ++  VTFVV Y+PTE            K  +  AL+  +  V +R+++ VL  ANARTG+R +G    D+K++GA GRD +N NG+ LL  A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+IL + +
Sbjct:    8 DLSFGTFNVHTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRRRDGC--CDAKIMGANGRDIMNNNGERLLELASDNQLSLTNTYFPTPKGGVQHTFQSSNKGKEKYRLDFILMQDS 251          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 3.600e-66
Identity = 124/258 (48.06%), Postives = 176/258 (68.22%), Query Frame = 1
Query:    1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEA------PEGQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
            +L+FGTF+VRT   +G N IGH +  +++  +A GCDVIGLQET+R+G   I+  GY + +SG  +G K ++G+ GVG+AIKE + +  GE+G  +ECIS RL+K R+ I ++  VTFVV Y+PTE            K  +  AL+  +  V +R+++ VL DANARTG+R +G    D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK GV +TFQ +N+ K + RLD+IL +Q DRR VR V+V+R
Sbjct:  154 DLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQCSNKGKEKYRLDFILMRQTDRRFVRNVSVKR 409          
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5KA69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA69_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 4.920e-65
Identity = 120/257 (46.69%), Postives = 174/257 (67.70%), Query Frame = 1
Query:    4 LTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
            L FGTFNVRT A +G N IGH + T+++ C+A GCDV+ L E++R+G   I+  GY + +SG  +G K ++G HGVG+AIKE + +  GE+G T+ECIS RL+K R+ I ++  VTFVV Y+PTE            K  + A+L+  +  V + +++ VL DANART +R +G    D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK G  +TFQS+++ K + RL++I+ +Q DRR VR  +V+R
Sbjct:  125 LPFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVMELHESRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFRASLDAAIREVHSCDHLVVLMDANARTCRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGRQHTFQSSDKGKEKKRLEFIVMRQTDRRFVRIASVKR 379          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV75_9PHAE2.310e-7350.00Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE2.340e-7351.16Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JMB4_9PHAE9.970e-7150.19Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE1.280e-7050.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQH5_9PHAE5.610e-7051.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J6W7_9PHAE2.660e-6848.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBZ6_9PHAE9.380e-6850.64Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KZE6_9PHAE1.550e-6748.37Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JVN7_9PHAE3.600e-6648.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KA69_9PHAE4.920e-6546.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1060contigD-herbacea_F_contig1060:54082..54840 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score84.0
Seed ortholog evalue1.1e-13
Seed eggNOG ortholog7668.SPU_012129-tr
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Endonuclease-reverse transcriptase
EggNOG OGs3AJJK@33154,3BZRE@33208,3DG9F@33213,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons1
Model size759
Cds size759
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927474.6577194-CDS-D-herbacea_F_contig1060:54081..548401622927474.6577194-CDS-D-herbacea_F_contig1060:54081..54840Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1060 54082..54840 -
1690790190.8067257-CDS-D-herbacea_F_contig1060:54081..548401690790190.8067257-CDS-D-herbacea_F_contig1060:54081..54840Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1060 54082..54840 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1060.646.1prot_D-herbacea_F_contig1060.646.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1060 54082..54840 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1060.646.1

>prot_D-herbacea_F_contig1060.646.1 ID=prot_D-herbacea_F_contig1060.646.1|Name=mRNA_D-herbacea_F_contig1060.646.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=253bp
ELTFGTFNVRTAAVNGVNGIGHMDTLLRACAAEGCDVIGLQETKRDGTSE
ISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISA
RLLKARISIKSNFVTFVVAYSPTEEAPEGQKAKYMAALNCTVASVPAREY
VFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKL
ALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR
PP*
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mRNA from alignment at D-herbacea_F_contig1060:54082..54840-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1060.646.1 ID=mRNA_D-herbacea_F_contig1060.646.1|Name=mRNA_D-herbacea_F_contig1060.646.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=759bp|location=Sequence derived from alignment at D-herbacea_F_contig1060:54082..54840- (Desmarestia herbacea DmunF female)
GAGCTCACGTTCGGTACGTTCAACGTTCGCACAGCAGCAGTCAACGGAGT CAACGGTATCGGCCACATGGACACCCTACTGAGGGCCTGTGCTGCAGAGG GTTGTGACGTCATCGGATTGCAGGAGACCAAAAGGGACGGAACGTCGGAA ATTTCTGCATCTGGATACCGCGTCTTTTTTAGTGGCGATTGCAGCGGGGT AAAAGGAAGAAAAGGGCAGCACGGGGTTGGACTTGCGATAAAGGAGGAGA TCGTTAAAAAGGCTGGCGAGGACGGCATCACAATCGAGTGCATCAGCGCA CGTCTCCTGAAAGCCCGAATTTCGATTAAATCAAACTTCGTTACGTTTGT GGTAGCCTATTCCCCGACCGAGGAAGCGCCGGAGGGGCAGAAGGCCAAAT ACATGGCAGCCCTCAACTGCACCGTTGCATCAGTGCCCGCTCGGGAATAC GTCTTCGTTTTAACAGACGCGAACGCCAGGACAGGGAAGAGAGGTGAGGG CGGAGGAGAAGCAGACAGCAAAGTGTTGGGCGCATATGGCCGAGACAAGC TCAACGAAAACGGCAAACTACTGCTGGGTTTCGCTGAAGACAACAAGCTC GCTCTTCTGAACACTTTATTTTGCACCCCCAAAAGTGGCGTGTCCTATAC ATTCCAAAGCGCCAACCGCAGCAAGGGACAAGCACGTTTGGATTACATTC TGACAAAGCAGGCGGACCGCCGACTCGTCCGCTGCGTTAATGTCCGACGC CCCCCTTAG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1060:54082..54840-

>mRNA_D-herbacea_F_contig1060.646.1 ID=mRNA_D-herbacea_F_contig1060.646.1|Name=mRNA_D-herbacea_F_contig1060.646.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1518bp|location=Sequence derived from alignment at D-herbacea_F_contig1060:54082..54840- (Desmarestia herbacea DmunF female)
GAGCTCACGTTCGGTACGTTCAACGTTCGCACAGCAGCAGTCAACGGAGT
CAACGGTATCGGCCACATGGACACCCTACTGAGGGCCTGTGCTGCAGAGG
GTTGTGACGTCATCGGATTGCAGGAGACCAAAAGGGACGGAACGTCGGAA
ATTTCTGCATCTGGATACCGCGTCTTTTTTAGTGGCGATTGCAGCGGGGT
AAAAGGAAGAAAAGGGCAGCACGGGGTTGGACTTGCGATAAAGGAGGAGA
TCGTTAAAAAGGCTGGCGAGGACGGCATCACAATCGAGTGCATCAGCGCA
CGTCTCCTGAAAGCCCGAATTTCGATTAAATCAAACTTCGTTACGTTTGT
GGTAGCCTATTCCCCGACCGAGGAAGCGCCGGAGGGGCAGAAGGCCAAAT
ACATGGCAGCCCTCAACTGCACCGTTGCATCAGTGCCCGCTCGGGAATAC
GTCTTCGTTTTAACAGACGCGAACGCCAGGACAGGGAAGAGAGGTGAGGG
CGGAGGAGAAGCAGACAGCAAAGTGTTGGGCGCATATGGCCGAGACAAGC
TCAACGAAAACGGCAAACTACTGCTGGGTTTCGCTGAAGACAACAAGCTC
GCTCTTCTGAACACTTTATTTTGCACCCCCAAAAGTGGCGTGTCCTATAC
ATTCCAAAGCGCCAACCGCAGCAAGGGACAAGCACGTTTGGATTACATTC
TGACAAAGCAGGCGGACCGCCGACTCGTCCGCTGCGTTAATGTCCGACGC
CCCCCTTAGGAGCTCACGTTCGGTACGTTCAACGTTCGCACAGCAGCAGT
CAACGGAGTCAACGGTATCGGCCACATGGACACCCTACTGAGGGCCTGTG
CTGCAGAGGGTTGTGACGTCATCGGATTGCAGGAGACCAAAAGGGACGGA
ACGTCGGAAATTTCTGCATCTGGATACCGCGTCTTTTTTAGTGGCGATTG
CAGCGGGGTAAAAGGAAGAAAAGGGCAGCACGGGGTTGGACTTGCGATAA
AGGAGGAGATCGTTAAAAAGGCTGGCGAGGACGGCATCACAATCGAGTGC
ATCAGCGCACGTCTCCTGAAAGCCCGAATTTCGATTAAATCAAACTTCGT
TACGTTTGTGGTAGCCTATTCCCCGACCGAGGAAGCGCCGGAGGGGCAGA
AGGCCAAATACATGGCAGCCCTCAACTGCACCGTTGCATCAGTGCCCGCT
CGGGAATACGTCTTCGTTTTAACAGACGCGAACGCCAGGACAGGGAAGAG
AGGTGAGGGCGGAGGAGAAGCAGACAGCAAAGTGTTGGGCGCATATGGCC
GAGACAAGCTCAACGAAAACGGCAAACTACTGCTGGGTTTCGCTGAAGAC
AACAAGCTCGCTCTTCTGAACACTTTATTTTGCACCCCCAAAAGTGGCGT
GTCCTATACATTCCAAAGCGCCAACCGCAGCAAGGGACAAGCACGTTTGG
ATTACATTCTGACAAAGCAGGCGGACCGCCGACTCGTCCGCTGCGTTAAT
GTCCGACGCCCCCCTTAG
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