mRNA_D-herbacea_F_contig1060.646.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE) HSP 1 Score: 240 bits (612), Expect = 2.310e-73 Identity = 129/258 (50.00%), Postives = 178/258 (68.99%), Query Frame = 1
Query: 1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
+L+FGTFNVRT A +G N IGH + T+++ C+A GCDVIGLQET+R G I+ GY + +SG +G K ++G HGVG+ IKE + + GE+G T+ECI RL+K R+ I ++ V FVV Y+PTE K + AL+ + V +R+++ VL DANARTG+R +G D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+IL +QADRR VR V+V+R
Sbjct: 80 DLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKR 335
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE) HSP 1 Score: 243 bits (621), Expect = 2.340e-73 Identity = 132/258 (51.16%), Postives = 182/258 (70.54%), Query Frame = 1
Query: 1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTE--EAPEG----QKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
+L+FGTFNVRT A +G N IGH + T+++ C+A GCDVIGLQET+R G I+ GY + +SG +G K ++G HGVG+AIKE + + GE+G T+ECIS RL+K R+ I ++ VTF+V Y+PTE EG K + AL+ + V +R+++ VL DANARTG+R +G D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+I +QADRR VR V+V+R
Sbjct: 174 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFIFMRQADRRFVRNVSVKR 429
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE) HSP 1 Score: 238 bits (606), Expect = 9.970e-71 Identity = 129/257 (50.19%), Postives = 177/257 (68.87%), Query Frame = 1
Query: 1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVR 747
+L+FGTFNVRT A +G N IGH + T+++ C+A GCDVIGLQET+R G I+ GY + +SG +G K ++G HGVG+AIKE + + GE+G T+ECIS RL+K R+ I ++ VTFVV Y+PTE K + AL+ + V +R+++ VL DANARTG+R +G D+K++GAYGRD +N NG+ LLG A DN+L+L NT TPK GV +TFQS+N+ K + RLD IL +Q DRR VR V+V+
Sbjct: 85 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYVQTPKGGVQHTFQSSNKGKEKYRLDLILMRQTDRRFVRNVSVK 339
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE) HSP 1 Score: 243 bits (621), Expect = 1.280e-70 Identity = 131/258 (50.78%), Postives = 181/258 (70.16%), Query Frame = 1
Query: 1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
+L+FGTFNV T A +G N IGH + T+++ C+A GCDVIGLQET+R+G I+ GY + +SG +G K ++G HGVG+AIKE + + GE+G T+ECIS RL+K R+ I ++ VTFVV Y+PTE K + AL+ + V +R+++ VL DANARTG+R +G D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+IL +QADRR VR V+V+R
Sbjct: 656 DLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKR 911
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE) HSP 1 Score: 243 bits (619), Expect = 5.610e-70 Identity = 132/258 (51.16%), Postives = 179/258 (69.38%), Query Frame = 1
Query: 1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
+L+FGTFNVRT A +G N IGH + T+++ CAA CDVIGLQET+R G I+ GY + +SG +G K ++G HGVG+AIKE + GE G T+ECIS RL+K R+ I ++ VTFVV Y+PTE A K + AL+ + V +R+++ VL DANARTG+R +G D+K++GAYGRD +N NG+ LLG A DN+L+L+NT F TPK GV +TFQS+N+ K + RLD+IL +Q DRRLVR +V+R
Sbjct: 89 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICAATDCDVIGLQETRRAGQGAITHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKR 344
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5J6W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6W7_9PHAE) HSP 1 Score: 234 bits (596), Expect = 2.660e-68 Identity = 125/258 (48.45%), Postives = 178/258 (68.99%), Query Frame = 1
Query: 1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
+L+FGTFNVRT A +G N IGH + T+++ C+A GCDV+GL ET+R+G I+ GY + +SG +G K ++G HG+G+AIKE + + GE+G T+ECIS RL+K R+ I ++ VTFVV Y+PTE K + AL+ + V +R+++ VL DANARTG+R +G ++K++GAYGRD +N +G+ LLG A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+IL +Q DRR VR V+ R
Sbjct: 36 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVVGLHETRREGQGSIAHDGYVIIWSGARAGTKEKRGVHGMGIAIKEVMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CNAKIMGAYGRDIMNNSGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQTDRRFVRNVSDNR 291
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE) HSP 1 Score: 222 bits (565), Expect = 9.380e-68 Identity = 118/233 (50.64%), Postives = 161/233 (69.10%), Query Frame = 1
Query: 73 TLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
T+++ C+A GCDVIGLQET+R+G I+ GY + +SG +G K ++G HGVG+AIKE + + GE+G T+ECIS RL+K R+ I ++ VTFVV Y+PTE K + AL+ + V +R+++ VL DANARTG+R GG D+KVLGAYGRD +N NG+ L G A DN+ +L NT F TPK GV +TFQS+N+ K + RLD+IL +QADRR VR V+V+R
Sbjct: 2 TVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKR 232
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE) HSP 1 Score: 220 bits (560), Expect = 1.550e-67 Identity = 119/246 (48.37%), Postives = 167/246 (67.89%), Query Frame = 1
Query: 1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQA 714
+L+FGTFNV T A +G N IGH + T+++ C+A GCDVIGLQET+R+G I+ GY + +SG +G K ++G HGVG+AIKE I + GE+G T+ECIS RL+K R+ I ++ VTFVV Y+PTE K + AL+ + V +R+++ VL ANARTG+R +G D+K++GA GRD +N NG+ LL A DN+L+L NT F TPK GV +TFQS+N+ K + RLD+IL + +
Sbjct: 8 DLSFGTFNVHTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRRRDGC--CDAKIMGANGRDIMNNNGERLLELASDNQLSLTNTYFPTPKGGVQHTFQSSNKGKEKYRLDFILMQDS 251
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE) HSP 1 Score: 229 bits (585), Expect = 3.600e-66 Identity = 124/258 (48.06%), Postives = 176/258 (68.22%), Query Frame = 1
Query: 1 ELTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEA------PEGQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
+L+FGTF+VRT +G N IGH + +++ +A GCDVIGLQET+R+G I+ GY + +SG +G K ++G+ GVG+AIKE + + GE+G +ECIS RL+K R+ I ++ VTFVV Y+PTE K + AL+ + V +R+++ VL DANARTG+R +G D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK GV +TFQ +N+ K + RLD+IL +Q DRR VR V+V+R
Sbjct: 154 DLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQCSNKGKEKYRLDFILMRQTDRRFVRNVSVKR 409
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Match: A0A6H5KA69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA69_9PHAE) HSP 1 Score: 222 bits (565), Expect = 4.920e-65 Identity = 120/257 (46.69%), Postives = 174/257 (67.70%), Query Frame = 1
Query: 4 LTFGTFNVRTAAVNGVNGIGH-MDTLLRACAAEGCDVIGLQETKRDGTSEISASGYRVFFSGDCSGVKGRKGQHGVGLAIKEEIVKKAGEDGITIECISARLLKARISI-KSNFVTFVVAYSPTEEAPE------GQKAKYMAALNCTVASVPAREYVFVLTDANARTGKRGEGGGEADSKVLGAYGRDKLNENGKLLLGFAEDNKLALLNTLFCTPKSGVSYTFQSANRSKGQARLDYILTKQADRRLVRCVNVRR 750
L FGTFNVRT A +G N IGH + T+++ C+A GCDV+ L E++R+G I+ GY + +SG +G K ++G HGVG+AIKE + + GE+G T+ECIS RL+K R+ I ++ VTFVV Y+PTE K + A+L+ + V + +++ VL DANART +R +G D+K++GAYGRD +N NG+ LLG A DN+L+L NT F TPK G +TFQS+++ K + RL++I+ +Q DRR VR +V+R
Sbjct: 125 LPFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVMELHESRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFRASLDAAIREVHSCDHLVVLMDANARTCRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGRQHTFQSSDKGKEKKRLEFIVMRQTDRRFVRIASVKR 379 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1060.646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1060.646.1 >prot_D-herbacea_F_contig1060.646.1 ID=prot_D-herbacea_F_contig1060.646.1|Name=mRNA_D-herbacea_F_contig1060.646.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=253bp ELTFGTFNVRTAAVNGVNGIGHMDTLLRACAAEGCDVIGLQETKRDGTSEback to top mRNA from alignment at D-herbacea_F_contig1060:54082..54840- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1060.646.1 ID=mRNA_D-herbacea_F_contig1060.646.1|Name=mRNA_D-herbacea_F_contig1060.646.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=759bp|location=Sequence derived from alignment at D-herbacea_F_contig1060:54082..54840- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1060:54082..54840- >mRNA_D-herbacea_F_contig1060.646.1 ID=mRNA_D-herbacea_F_contig1060.646.1|Name=mRNA_D-herbacea_F_contig1060.646.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1518bp|location=Sequence derived from alignment at D-herbacea_F_contig1060:54082..54840- (Desmarestia herbacea DmunF female)back to top |