mRNA_D-herbacea_F_contig106.627.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: D8LBH9_ECTSI (Putative ankyrin protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH9_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 3.860e-135 Identity = 309/407 (75.92%), Postives = 332/407 (81.57%), Query Frame = 1
Query: 322 LHFAATGGSAGVVDAILDMAPSVIDSKDDHGLTPLALALITGCKEAAVRLASRGADIGAADTQGVAPAHRAAGHGDLDALELLAGNGADFETQSGSGTXXXXXXXXXXXXXXXXXXXXXASPDPRNKQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEAVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEVGLEDVMARGKELSEEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGRENVHGVKA 1542
+HFAATGGSA VV I DMAPSVI+SKDDHGLTPLALALITG EAA RLAS+GAD+ AA ETQSG XXXXXXXXXXXXXXXXXXXXX PRNKQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AVEAILAT +GRKCA L D+ GRVPAHLAAMS+R DLVE LLPHS LGP+VGLE VMARGKELSEEHEGELRAQE LKK S PA AQGLGEEGNTSPAETPEQREAA+AAK RGN LL AKD+ GALAAY+EAI LDGSDAAFRSNRSAV+MSM ++E+AL+DAEVCRRLKPDWPKACYRMA+AR+AL R+EDAALAAWEGVQLDN+N LKSLLQ CV+KGR +HG K+
Sbjct: 1 MHFAATGGSAEVVGEIFDMAPSVINSKDDHGLTPLALALITGSHEAAARLASQGADVNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRNKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHSGLGPDVGLEVVMARGKELSEEHEGELRAQEALKKPSGPAPAQGLGEEGNTSPAETPEQREAAVAAKTRGNDLLKAKDLAGALAAYSEAIELDGSDAAFRSNRSAVFMSMKDYEKALVDAEVCRRLKPDWPKACYRMAVARLALGRFEDAALAAWEGVQLDNDNAQLKSLLQTCVEKGRATLHGPKS 407
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: A0A7S2RLK0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK0_9STRA) HSP 1 Score: 230 bits (586), Expect = 3.290e-62 Identity = 225/524 (42.94%), Postives = 291/524 (55.53%), Query Frame = 1
Query: 97 AAAMPSATL-SKEEKLDVANKAREEVKKLLSVAKEGSVTGVTSFVKEYVAKH----------------------------SQPGHP----LTEADVLGSIRDGNGRTALHFAATGGSAGVVDAILDMAPSVIDSKDDHGLTPLALALITGCKEAA----VRLASRGADIGAADTQGVAPAHRAAGHGDLDALELLAGNGADFETQSGSGTXXXXXXXXXXXXXXXXXXXXXASPDPRNKQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEAVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHS--DLGPEVGLEDVMARGK----------ELSEEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGRE 1521
+A P A+L SK+ ++ R +V +LL A++G V + F++EY A +P P + D + +DGNGRTALHFA+ GS V+ IL M P+ +DD+G TPL LA AA + ++ AD+ D GVAP H AA G++ A++L G+ + +SG+GT XXXXXXXXXXXXX A + N QGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSE VEA+L TE G+ CA LKDA G +P LAA + +V LL PHS D ++ V+A GK E S+ E + Q T++ A G NT PA +PE++ A A K GN AKD T A YT AI LDG+DA F SNRSA ++ + + RAL+DA CR L+PDW KAC+RMA AR+AL YEDAALAA+EG++++ N LK L+ K V+ GR+
Sbjct: 2 SAREPMASLASKKAAGKHMHEVRAQVARLLQAAQQGDVPELRQFLEEYSADSLREERESFGLGDGDESEEDDYPTGHFTSKKPPRPERLASIQRDAIRDFKDGNGRTALHFASNSGSCEVLRFILGMEPAAAHVRDDNGATPLHLAASCHAPTAADAFEILVSEFSADVTTVDKSGVAPVHHAAAAGNVAAIQLCFDKGSSLDAKSGAGTPLXXXXXXXXXXXXXKLISLGADVEAVNDQGLTPIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHICADMELSEGVEALLETETGKTCAKLKDARGNLPMDLAAQAGAEAIVHLLHPHSFGDGDQVQPIQQVLATGKATAAAAPSSDEASKPTSDEQQGQSTVE-DDVMREADRSGWVENTEPAGSPEEKARAQALKDEGNAAFKAKDFTAASQMYTAAIKLDGADAVFWSNRSACWLELKQPRRALVDAIQCRSLRPDWAKACFRMASARLALDMYEDAALAAFEGLKMEQNNVPLKRLMNKAVELGRQ 524
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: A0A7S4D5D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5D3_HETAK) HSP 1 Score: 176 bits (447), Expect = 1.740e-46 Identity = 106/223 (47.53%), Postives = 142/223 (63.68%), Query Frame = 1
Query: 850 AVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEVGLEDVMARGKELSEEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGR 1518
A A+LAT +G+KCA D G PA +AA + +L LLP + LG + +E +M KE E + K A G E +T PA+ E A A K GN L +KD GA+A YT+AI LDGSDAAF SNRSA YM +++RAL AE+ R+L+PDWPKAC+R+A+AR+AL +YEDAA+AA++G++LD EN +LKSLL+KCV++GR
Sbjct: 8 ACAAVLATPMGKKCAARPDDRGLRPAEIAADNGFGELAAALLPDAGLGS-MTVEALMEAAKERERNAPPEPEDADEASK----AQEFGFSVE-STDPAKDQETATQAQAIKAEGNSLFVSKDYAGAIAKYTQAIELDGSDAAFWSNRSACYMETKQYQRALASAEMARQLRPDWPKACFRLAVARLALEQYEDAAMAAFDGLKLDEENGELKSLLRKCVRRGR 224
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: A0A836CAJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ6_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.930e-46 Identity = 110/231 (47.62%), Postives = 144/231 (62.34%), Query Frame = 1
Query: 850 AVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEVG-----LEDVMARGKELSEEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKD--ITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGRE 1521
AV+A+LAT++GRKCA L++ G P LAAM R LVE L P + G +E++MA G + EH AQE A A+ + P + E + AA A K GN AA + ALAAYT A+ LD ++ + SNRSAV+M++G+ AL DAEV RRLKPDWPKACYRMAIAR AL +E+AA++AWEGVQLDN N +LK +LQ+CV++GR+
Sbjct: 19 AVDALLATDVGRKCAALRNDAGMRPIDLAAMGRHRALVEKLHPVTTSNSGGGGSGETVEELMAAGLQRHREHVEAAEAQER-----EAARAEAAALKPTRFPEASTEAKRAAEATKTEGNAAFAAAPPRLAEALAAYTRAVELDANNHVYWSNRSAVHMALGDAAAALADAEVARRLKPDWPKACYRMAIAREALGMWEEAAVSAWEGVQLDNTNAELKKVLQRCVEEGRK 244
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: W7TSF6_9STRA (Ankyrin repeat family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF6_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.440e-46 Identity = 155/441 (35.15%), Postives = 206/441 (46.71%), Query Frame = 1
Query: 262 HPLTEAD---VLGSIRDGNGRTALHFAATGGSAGVVDAILDMAPSVIDSKDDHGLTPLALALITGC---------KEAAVRLASRGAD-----IGAADTQGVAPAHRAAGHGDLDALELLAGNGADFETQSGSGTXXXXXXXXXXXXXXXXXXXXXASPDPRNKQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLS-EAVEAILATEI-GRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEVGLEDVMARGKELS---EEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGR 1518
HP E D +L +DGNGRTALHFA G +V ILD+AP + +DD G TPL LA G K+ L RGAD + + G H AGH D++A+ L +G+D +G+GT D N QGL S + V+AILAT G CA + G+ P HLAA +A +D+VE LLP+SD+ V E++M+ G+ + EE +G L+ + G+ PA + E AL K NR A + AL Y E+I L+G D+A SNRS + +G E AL DAE R LKP WPKAC+RMA AR+AL RYEDAALAA+EG+QLD+ NQ L ++L+ ++ GR
Sbjct: 59 HPDLEDDSAAILRQYKDGNGRTALHFACHAGQVEMVRHILDLAPEGVSWEDDKGDTPLILAAAGGGDGNTSRVSRKDLLEVLLDRGADPNHGPVKDDEHDGARALHHVAGHDDVEAVRTLLRHGSDVNAAAGTGTPLHWASAEGAKASLEALIETGGDVDAVNDQGLSPIILAAAHGCGGCVALLAKGGADVGFILSGAGLTALHMMAEYGSLDGVQAILATGAPGVACAVQESENGK-PIHLAAWAAHKDVVETLLPYSDVKETV--EELMSWGRARAAAYEEEKGRSSDHTMLQPEQDSRHSSGVH---LPPPAASAADVETALRLKETANRHYVAGEYGQALPLYDESIGLNGRDSALWSNRSGCLLKLGRPEDALRDAETARALKPGWPKACFRMAEARLALKRYEDAALAAYEGIQLDSGNQALHNILKTAIELGR 493
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: A0A7S4C7I0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C7I0_9EUGL) HSP 1 Score: 181 bits (458), Expect = 2.020e-45 Identity = 163/467 (34.90%), Postives = 228/467 (48.82%), Query Frame = 1
Query: 121 LSKEEKLDVANKAREEVKKLLSVAKEGSVTGVTSFVKEYVAKHSQPGHPLTEADVLGSIRDGNGRTALHFAATGGSAGVVDAILDMAPSVIDSKDDHGLTPLALALITGCKEAAVRLASRGADIGAADTQGVAPAHRAAGHGDLDALELLAGNGADFETQSGSGTXXXXXXXXXXXXXXXXXXXXXASPDPRNKQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEAVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEVGLEDVMARGKELSEEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGRE 1521
++K++ + A A E V + + G V GV K Y+ Q E +L +DG+ RTALHFAA G VV +L ++ + +S DD G TPL LA+ G + L G ++ AA+ GV H+AAG G++ LE L + D E +S +GT XXXXXXXXXXXXXXXXXXX + N QGL + AV+ I+ + G+KCA LK+ +P AA +LVE LLP S+ V E ++ G + H E + ++ + ++ A+ K RGN KD A + +AIS DGS+A F SNRS ++ MG + AL DA R LKPDWPK +R A A MA+ YEDAA AAW+G++LD +NQ++ +LL+K V+KG+E
Sbjct: 8 MTKKKDAETATAALEAVANFMKDCRFGDVEGV----KRYLEAAQQSDEANIEESLL-ETKDGHDRTALHFAAFEGQVEVVKYLLSISSRIKESVDDEGNTPLILAVEGGRTKVVQMLLEAGCNVNAANKTGVQAVHQAAGKGEVSILEALKQHNTDLEPKSKAGTPLXXXXXXXXXXXXXXXXXXXXXXNATNSQGLPPVVLAAASASDRIVQHMVTRGADVGMVLSGNVTVLHMCAEMGCAAAVKEIMKKDQGQKCALLKNDEKLLPVQCAATHNHDELVEFLLPFSNCNMTV--EQLLEEG---AVRHANEQKQKDAAQAEKRAKXXXXXXXXXXXXXXXXQADKDRAIELKNRGNEHFRKKDFVKAWEYFNQAISADGSEATFFSNRSVCHLEMGLAKLALADANKARHLKPDWPKVHFRRAAALMAMELYEDAANAAWDGLRLDEDNQEIANLLKKAVEKGKE 464
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: A0A7S0SRZ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRZ6_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.590e-37 Identity = 131/430 (30.47%), Postives = 194/430 (45.12%), Query Frame = 1
Query: 262 HPLTEADVLGSIRDGNGRTALHFAATGGSAGVVDAILDMAPSV---IDSKDDHGLTPLALALITGCKEAAVRLASRGADIGAADTQGVAPAHRAAGHGDLDALELLAGNGADFETQSGSGTXXXXXXXXXXXXXXXXXXXXXA-SPDPRNKQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEAVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEVGLED--VMARGKELSEEHEGELRAQETLK----KSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGRE 1521
H T D++ + G+T LH AA G +V ILD ++ I+ +D++G+TPL A I+ + L S A + + G H A+ G LD L+LL +G D +S +G P+ + GL + AV I+ + G CA L+ G +P HLAAMS +++E+L+P + + + ++ V K L E GE R K KSS + E N P + + EA K GN + + A+ YT+ I LD ++ SNRSA Y+ + +++ +L DAE+CRRL P WPK CYR+A AR AL YEDAA+AA+EG++LDN N++LK ++Q VK GRE
Sbjct: 8 HHTTINDIINEFQS-EGKTLLHLAAGSGHVSIVQYILDNCENINNLINKQDNNGMTPLINATISESHDIMKLLLSHNALVNIPNKDGATAIHFASSDGSLDRLQLLIKSGGDLTIKSSAGNALHWASGKGRHDIVKYLLDNNVVDPNELSGSGLPPVIMAAVAHSEECVCLLLEANVNVGFILSGNLTLLHICAENGMKNAVALIIKSIDGINCANLETIDGNLPIHLAAMSKYEEIIEILIPVTSVINDKYIDSSTVDIINKLLIE---GEERLHHWHKNNNNKSSXXXXXNNISE--NIKPIDEETKAEAEKY-KQSGNTYYSNRQYNEAIKEYTKGIELDQTNQVLWSNRSASYLQIKDYQNSLKDAEICRRLDPTWPKGCYRLAAARFALELYEDAAVAAYEGLKLDNNNKELKKIIQDAVKLGRE 430
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: I1PRM6_ORYGL (Uncharacterized protein n=5 Tax=Oryza TaxID=4527 RepID=I1PRM6_ORYGL) HSP 1 Score: 154 bits (388), Expect = 2.660e-36 Identity = 166/463 (35.85%), Postives = 226/463 (48.81%), Query Frame = 1
Query: 157 AREEVKKLLSVAKEGSVTGVTSFVKEYVAKHSQPGHPLTEADVLGSIRDGNGRTALHFAATGGSAGVVDAILDMAPSVIDSKDDHGLTPLALALITGCKEAAVRLASRGADIGAADTQGVAPAHRAAGHGDLDALELLAGNGADFETQSGSGTXXXXXXXXXXXXXXXXXXXXXASPDPRNKQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEAVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEV---GLEDVMARGKELSEEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGRENVHGV 1536
AR +V+ L A+ G + + K+ A + G + A V +++D N RTALHFAA G V ++ +D KDD G TPL A + L GAD A + G P H AAG G+LD ++L G D E++S +G XXXXXXXXXXXXXXXXXXX A P+ N G+ XXXXXXXXXXXX C D G P +AA+ R++VELLLP + P V ++ ++ K + E+ + + + + P + E +E +L AK RG+ KD A+ AYT+AI L+ +DA SNRS ++ G+ ERAL DA CR L+PDW KACYR A L R+E+AA A +EGVQL+ EN +L S ++ V+ GR+ HG
Sbjct: 10 ARSKVQAFLEAARAGDLDSL----KKLAAALDEEGKGV--AAVAAAVKDANKRTALHFAAREGRTHVCHFLISDLALPVDPKDDDGETPLIHATRQAHLQTVTYLLHHGADPSVASSLGATPLHHAAGIGNLDLMKLFLSKGVDVESESDAGXXXXXXXXXXXXXXXXXXXXHDAKPNTENXXGITPLLSAVAAGSLPCLDILIQAGADPNIRAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXAC----DDDGLKPIQVAALRNNREVVELLLPLTSPIPGVLSWSIDGIIENTKSVEEKAQVKEATTQKADRLQIPQLVEVSSE-----------AKERSLEAKSRGDDAFRNKDYLVAVDAYTQAIELNPNDATLHSNRSLCWLRAGQAERALEDARACRALRPDWAKACYREGAALRLLQRFEEAANAFYEGVQLEPENGELVSAFREAVEAGRK-FHGT 450
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: A0A0E0PGC9_ORYRU (DUF1664 domain-containing protein n=3 Tax=Oryza TaxID=4527 RepID=A0A0E0PGC9_ORYRU) HSP 1 Score: 154 bits (388), Expect = 1.900e-34 Identity = 165/463 (35.64%), Postives = 225/463 (48.60%), Query Frame = 1
Query: 157 AREEVKKLLSVAKEGSVTGVTSFVKEYVAKHSQPGHPLTEADVLGSIRDGNGRTALHFAATGGSAGVVDAILDMAPSVIDSKDDHGLTPLALALITGCKEAAVRLASRGADIGAADTQGVAPAHRAAGHGDLDALELLAGNGADFETQSGSGTXXXXXXXXXXXXXXXXXXXXXASPDPRNKQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEAVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEVG---LEDVMARGKELSEEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAETPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGRENVHGV 1536
AR +V+ L A+ G + + K+ A + G + A V +++D N RTALHFAA G V ++ +D KDD G TPL A + L GAD A + G P H AAG G+LD ++L G D E++S +G XXXXXXXXXXXXXXXXXX A P+ N G+ XXXXXXXXXXXX C D G P +AA+ R++VELLLP + P V ++ ++ K + E+ + + + + P + E +E +L AK RG+ KD A+ AYT+AI L+ +DA SNRS ++ G+ ERAL DA CR L+PDW KACYR A L R+E+AA A +EGVQL+ EN +L S ++ V+ GR+ HG
Sbjct: 404 ARSKVQAFLEAARAGDLDSL----KKLAAALDEEGKGV--AAVAAAVKDANKRTALHFAAREGRTHVCHFLISDLALPVDPKDDDGETPLIHATRQAHLQTVTYLLHHGADPSVASSLGATPLHHAAGIGNLDLMKLFLSKGVDVESESDAGXXXXXXXXXXXXXXXXXXXQHDAKPNTENXDGITPLLSAVAAGSLPCLDILIQAGAHPNIRAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXAC----DDDGLKPIQVAALRNNREVVELLLPLTSPIPGVSSWSIDGIIEYTKSVEEKAQVKEATTQKADRLQVPQLVEVSSE-----------AKERSLEAKSRGDDAFRNKDYLVAVDAYTQAIELNPNDATLHSNRSLCWLRAGQAERALEDARACRALRPDWAKACYREGAALRLLQRFEEAANAFYEGVQLEPENGELVSAFREAVEAGRK-FHGT 844
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Match: C5YXY8_SORBI (Uncharacterized protein n=7 Tax=Andropogoneae TaxID=147429 RepID=C5YXY8_SORBI) HSP 1 Score: 148 bits (373), Expect = 2.390e-34 Identity = 184/461 (39.91%), Postives = 234/461 (50.76%), Query Frame = 1
Query: 157 AREEVKKLLSVAKEGSVTGVTSFVKEYVAKHSQPGHPLTEADVLGSIRDGNGRTALHFAATGGSAGVVDAILDMAPSVIDSKDDHGLTPLALALITGCKEAAVRLASRGADIGAADTQGVAPAHRAAGHGDLDALELLAGNGADFETQSGSGTXXXXXXXXXXXXXXXXXXXXXASPDPRNKQGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEAVEAILATEIGRKCACLKDAYGRVPAHLAAMSARRDLVELLLPHSDLGPEVGLEDVMARGKELSEEHEGELRAQETLKKSSTPATAQGLGEEGNTSPAE-TPEQREAALAAKVRGNRLLAAKDITGALAAYTEAISLDGSDAAFRSNRSAVYMSMGEHERALLDAEVCRRLKPDWPKACYRMAIARMALHRYEDAALAAWEGVQLDNENQDLKSLLQKCVKKGRENVHGV 1536
AR +V+ L A+ G + + S V V G A V ++RD N RTALHFAA G A V + ++ +D KDD G TPL A G + A L GAD A G H AAG G+ + ++LL G D E++S +GT XXXXXXXXXXXXXXXXX XXXXXXXXXXX XXXXXXXXXXXXXX C D P +AA R+ VELLLP + P V +V +++ + GE S A L + G T E +PE ++ +L AK RG+ KD A+ AYT+A LD +DA SNRS ++ G+ ERAL DA+ CR L+PDW KACYR A L R+EDAA A +EGVQLD EN++L S ++ ++ GR+ HGV
Sbjct: 14 ARSKVQAFLEAARAGDLQSLKSLVA--VLDEDGTG----AASVASAVRDANKRTALHFAAREGRADVCEFLIGELGLPVDPKDDDGETPLIHATRQGHLDTAKYLLDHGADPSVATNLGATALHHAAGIGNTELMKLLLSKGVDVESESDAGTPLVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPCLEVLIKAGANPNVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIC----DDDELKPVQVAAWRNNREAVELLLPLTSPIPGVSNWNVDGIIEQMLPKEYGEK---------SQSKEAASL-KSGRTQTVEVSPEAKKRSLEAKSRGDDAFRRKDYLVAVDAYTQATELDPTDATVLSNRSLCWLRAGQAERALEDAKACRALRPDWAKACYREGAAHRLLQRFEDAANAFYEGVQLDPENKELVSAFREAIEAGRK-FHGV 453 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig106.627.1 >prot_D-herbacea_F_contig106.627.1 ID=prot_D-herbacea_F_contig106.627.1|Name=mRNA_D-herbacea_F_contig106.627.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=480bp MPSATLSKEEKLDVANKAREEVKKLLSVAKEGSVTGVTSFVKEYVAKHSQback to top mRNA from alignment at D-herbacea_F_contig106:554255..564602- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig106.627.1 ID=mRNA_D-herbacea_F_contig106.627.1|Name=mRNA_D-herbacea_F_contig106.627.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=10348bp|location=Sequence derived from alignment at D-herbacea_F_contig106:554255..564602- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig106:554255..564602- >mRNA_D-herbacea_F_contig106.627.1 ID=mRNA_D-herbacea_F_contig106.627.1|Name=mRNA_D-herbacea_F_contig106.627.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2880bp|location=Sequence derived from alignment at D-herbacea_F_contig106:554255..564602- (Desmarestia herbacea DmunF female)back to top |