mRNA_D-herbacea_F_contig106.612.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig106.612.1 vs. uniprot
Match: A0A6H5JLQ0_9PHAE (CS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ0_9PHAE) HSP 1 Score: 235 bits (599), Expect = 3.440e-73 Identity = 123/153 (80.39%), Postives = 130/153 (84.97%), Query Frame = 1
Query: 1 GPPPPPGADNRPKLRWDQNNEEVEIVVRVDPKVARSDVKVEVTSTMLKLSLRGQPVIAGHLFKTVDPEGCTWQIEDPGPGYPKEVMITLLKAEPTTRRENWWRAPLKGLENRGQPRPAPQPADPEMVRKAIEAIKAKTVAGAKPGVKLGAKPG 459
G PPP DNRPKLRWDQ+NEEVEI++RVDPKVARSDVKVEVT TMLKLSLR QPVIAG+LFK VDPEGCTWQI+DPGPG PKEV ITLLKAEP RE WWRAPLKGLE R RPAP+PADPEMVRKAIEAIKAK+ AG G KL AKPG
Sbjct: 170 GAPPPGAVDNRPKLRWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDDPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETR---RPAPKPADPEMVRKAIEAIKAKSAAGG--GTKLTAKPG 317
BLAST of mRNA_D-herbacea_F_contig106.612.1 vs. uniprot
Match: D8LBI6_ECTSI (CS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI6_ECTSI) HSP 1 Score: 177 bits (449), Expect = 9.720e-52 Identity = 94/128 (73.44%), Postives = 105/128 (82.03%), Query Frame = 1
Query: 88 DPKVARSDVKVEVTSTMLKLSLRGQPVIAGHLFKTVDPEGCTWQIEDPGPGYPKEVMITLLKAEPTTRRENWWRAPLKGLENRGQPRPAPQPADPEMVRKAIEAIKAKTVAGAKPGVKLGAKPGGAGQ 471
+P V+RSDVKVEVT +MLKLSLR QPVIAG+LFK VDPEGCTWQI++PGPG PKEV ITLLKAEP RE WWRAPLKGLE R RPAP+PADPEMVR+AIEA +K+ AG P KL AKPG AG+
Sbjct: 97 EPDVSRSDVKVEVTGSMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETR---RPAPKPADPEMVREAIEAFMSKSAAGGGP--KLTAKPGPAGR 219
BLAST of mRNA_D-herbacea_F_contig106.612.1 vs. uniprot
Match: A0A836CLZ7_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLZ7_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 8.900e-14 Identity = 42/95 (44.21%), Postives = 64/95 (67.37%), Query Frame = 1
Query: 40 LRWDQNNEEVEIVVRVDPKVARSDVKVEVTSTM-LKLSLRGQPVIAGHLFKTVDPEGCTWQIEDPGPGYPKEVMITLLKAEPTTRRENWWRAPLK 321
LRW Q+++EVEI + V ++ RSD+ +T T + ++++ + V++G L+K+VD EGC WQIED G + V I L K+EP+TR +WRA LK
Sbjct: 179 LRWTQSDDEVEIFLSVPKELGRSDIGFTLTGTSRITVTIKKEVVLSGELYKSVDREGCNWQIEDEGER--RVVWIQLTKSEPSTR-PGYWRALLK 270
BLAST of mRNA_D-herbacea_F_contig106.612.1 vs. uniprot
Match: A0A4P2TYN6_9TRYP (NudC2 protein (Fragment) n=2 Tax=Strigomonas galati TaxID=1003336 RepID=A0A4P2TYN6_9TRYP) HSP 1 Score: 56.2 bits (134), Expect = 1.210e-6 Identity = 32/92 (34.78%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 52 QNNEEVEIVVRVDPKVARSDVKVEVTSTMLKLSLRGQ-PVIAGHLFKTVDPEGCTWQIEDPGPGYPKEVMITLLKAEPTTRRENWWRAPLKG 324
Q +E+ IVV + P + V +T+T LK+ L+G+ P++ G+L+K + TW IED KE+ ITL+K + E WW ++G
Sbjct: 31 QTEKEINIVVPLTPGTTSKQLVVVITTTHLKVGLKGKDPILEGNLYKPIKASESTWTIEDK-----KELTITLVKTN--LKYEEWWPCVVEG 115
BLAST of mRNA_D-herbacea_F_contig106.612.1 vs. uniprot
Match: A0A7S0GY02_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GY02_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 4.160e-6 Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 37 KLRWDQNNEEVEIVVRVDPKVARSDVKVEVTSTMLKLSLRGQPVIAGHLFKTVDPEGCTWQIEDPGPGYPKEVMITLLKAEPTT 288
K W Q++++VE+ + VD KV DVKV++ S L +S+ +I+G LF V W + G G KE+ I + KA T
Sbjct: 94 KYSWKQSSDDVEVTIPVDSKVRSKDVKVDLKSKSLAISVNNNCLISGDLFSVVRASESNWSMSTEGNG--KEISIMMEKAAEKT 175
BLAST of mRNA_D-herbacea_F_contig106.612.1 vs. uniprot
Match: A0A7S0DAS9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DAS9_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 1.040e-5 Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 37 KLRWDQNNEEVEIVVRVDPKVARSDVKVEVTSTMLKLSLRGQPVIAGHLFKTVDPEGCTWQIEDPGPGYPKEVMITLLKAEPTT 288
K W Q++++VE+ + VD KV DVKV++ S L +S+ +I+G LF V W + G G KE+ I + KA T
Sbjct: 206 KYSWKQSSDDVEVTIPVDSKVRSKDVKVDLKSKSLAISVNNNCLISGDLFSVVRASESNWSMSTEGNG--KEISIMMEKAAEKT 287
BLAST of mRNA_D-herbacea_F_contig106.612.1 vs. uniprot
Match: A0A8C9TYK3_SCLFO (NudC domain containing 2 n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TYK3_SCLFO) HSP 1 Score: 52.8 bits (125), Expect = 2.010e-5 Identity = 37/95 (38.95%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 46 WDQNNEEVEIVVRVDPKVARSDVKVEVTSTMLKLSLRGQPVIAGHLFKTVDPEGCTWQIEDPGPGYPKEVMITLLKAEPTTRRE--NWWRAPLKG 324
W Q EEV + V V P A D+K + S ++LS++GQ +I G LF T + TW +ED K V I L+K T RE N W + L+G
Sbjct: 21 WYQTMEEVFVEVNVPPGTAARDIKCNLESRHIELSVKGQQLIKGKLFGTTVSDEGTWTLEDK-----KLVRIILMK----TNREAGNCWLSLLEG 106 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig106.612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig106.612.1 >prot_D-herbacea_F_contig106.612.1 ID=prot_D-herbacea_F_contig106.612.1|Name=mRNA_D-herbacea_F_contig106.612.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=187bp GPPPPPGADNRPKLRWDQNNEEVEIVVRVDPKVARSDVKVEVTSTMLKLSback to top mRNA from alignment at D-herbacea_F_contig106:207162..211353- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig106.612.1 ID=mRNA_D-herbacea_F_contig106.612.1|Name=mRNA_D-herbacea_F_contig106.612.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=4192bp|location=Sequence derived from alignment at D-herbacea_F_contig106:207162..211353- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig106:207162..211353- >mRNA_D-herbacea_F_contig106.612.1 ID=mRNA_D-herbacea_F_contig106.612.1|Name=mRNA_D-herbacea_F_contig106.612.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1122bp|location=Sequence derived from alignment at D-herbacea_F_contig106:207162..211353- (Desmarestia herbacea DmunF female)back to top |