mRNA_D-herbacea_F_contig1050.575.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1050.575.1
Unique NamemRNA_D-herbacea_F_contig1050.575.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A2D9I0C6_9PROT (ABC transporter ATP-binding protein n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9I0C6_9PROT)

HSP 1 Score: 505 bits (1300), Expect = 1.770e-180
Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 1
Query:    1 MTQPPETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
            MTQ PETTPKIRL DVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRR  AKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVA+IDHSGNPYVDQFITGSAEGPIKMELRKL
Sbjct:    1 MTQAPETTPKIRLTDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRGPAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVANIDHSGNPYVDQFITGSAEGPIKMELRKL 262          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A7Y0HDX7_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0HDX7_9PROT)

HSP 1 Score: 433 bits (1113), Expect = 5.180e-152
Identity = 218/255 (85.49%), Postives = 234/255 (91.76%), Query Frame = 1
Query:   22 TPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
            TPKIRL DVHKSFG K+IL+GF+LDVMPQESVVIIGGSGTGKSVMLKCILGL+ PEQGEIEIDGQP  HLS  DRE+VNA+IGMLFQNAALFDSLPVWENVAFGLIQGK M+R  A ++AIEKLAQVGL ADVG +SPA+LSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVID LIVKCVK+VGATAI+ITHDM SARRIADRMAMLYQGKVIW GPV  ID+SGN YVDQFI GSA+GPI+MEL KL
Sbjct:    6 TPKIRLKDVHKSFGPKQILRGFSLDVMPQESVVIIGGSGTGKSVMLKCILGLLSPEQGEIEIDGQPTVHLSNADREEVNAKIGMLFQNAALFDSLPVWENVAFGLIQGKRMKRKLAHDIAIEKLAQVGLGADVGKMSPADLSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDNLIVKCVKEVGATAISITHDMPSARRIADRMAMLYQGKVIWHGPVGQIDNSGNDYVDQFIHGSADGPIQMELLKL 260          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A8J7V1K3_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Marivibrio halodurans TaxID=2039722 RepID=A0A8J7V1K3_9PROT)

HSP 1 Score: 401 bits (1031), Expect = 1.710e-139
Identity = 203/262 (77.48%), Postives = 225/262 (85.88%), Query Frame = 1
Query:    1 MTQPPETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
            M+    T PKI+L  V K FG K +L G  L+V   ES+VIIGGSGTGKSVMLKCILGL+ P+ GEIEIDG+P+T LS  +RE VNARIGMLFQNAALFDSL VWENVAFGLIQGK M+R  AKE+AI KLA VGL ADVGALSPAELSGGMRKRVGLARAIAGDP+IIFFDEPTTGLDPIMGH+IDELIV CV+QVGATAI+ITHDMASARRIADRMAMLY+G++IW GP A ID SGN YVDQF+ G+AEGPI+MELRKL
Sbjct:    1 MSDATPTVPKIKLAGVEKHFGTKTVLNGVDLEVAQGESLVIIGGSGTGKSVMLKCILGLLTPDAGEIEIDGRPITRLSTAEREAVNARIGMLFQNAALFDSLSVWENVAFGLIQGKRMKRARAKEIAIRKLADVGLDADVGALSPAELSGGMRKRVGLARAIAGDPEIIFFDEPTTGLDPIMGHIIDELIVHCVRQVGATAISITHDMASARRIADRMAMLYRGEIIWSGPAASIDDSGNAYVDQFVHGAAEGPIRMELRKL 262          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A3S2Z9D8_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A3S2Z9D8_9PROT)

HSP 1 Score: 392 bits (1007), Expect = 7.190e-136
Identity = 195/252 (77.38%), Postives = 223/252 (88.49%), Query Frame = 1
Query:   22 TPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMEL 777
            TPKI++  V K+FGQK +L  F L+V+P+ESVVIIGGSG+GKSV LKC+LGL++P++G IEIDG  V  LS  DRE+VN+RIGMLFQNAALFDSLPVWENVAFGLIQGK M R+ AK++AI+KLAQVGL ADV  LSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGH+ID LIV+CV+ VGATA+TITHDM SARRI+DRMAMLY+GK IW GP A+ID+SGN YVDQFITGSAEGPI ME+
Sbjct:    6 TPKIKMTGVRKAFGQKVVLDSFDLEVLPRESVVIIGGSGSGKSVSLKCVLGLLQPDEGVIEIDGVDVGKLSHSDREEVNSRIGMLFQNAALFDSLPVWENVAFGLIQGKQMARNTAKDIAIDKLAQVGLGADVAVLSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHMIDNLIVECVRNVGATALTITHDMPSARRISDRMAMLYKGKNIWQGPTANIDNSGNDYVDQFITGSAEGPITMEV 257          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A3D9HVS6_9PROT (Phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HVS6_9PROT)

HSP 1 Score: 376 bits (966), Expect = 1.550e-129
Identity = 184/260 (70.77%), Postives = 220/260 (84.62%), Query Frame = 1
Query:    4 TQPPETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRK 783
            T P + +PKI + +V K+FG K +L GF LDVMP ESVVIIGGSGTGKSV LKCILGL+ P+ GEI+IDGQP+  LSK DR+ VNA+IGMLFQNAALFDS+ VWENVAF L+QG+GM R  A+++A+EKL QVGL+A++G  +PA+LSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGH+ID+LIVKCV++VGATA+TITHDMASARRIADR+ MLY+GK IW   +  +D SGNPYV QF+ G AEGPI + + K
Sbjct:    6 TAPVQASPKIAMRNVKKAFGSKVVLDGFDLDVMPGESVVIIGGSGTGKSVSLKCILGLLNPDSGEIDIDGQPILGLSKQDRDAVNAKIGMLFQNAALFDSISVWENVAFTLVQGEGMARSKARDIAMEKLGQVGLSAEIGERNPAQLSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHIIDKLIVKCVREVGATALTITHDMASARRIADRVTMLYKGKNIWTDRIEKLDSSGNPYVHQFVNGLAEGPIDLPILK 265          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A6N7FC40_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FC40_9PROT)

HSP 1 Score: 371 bits (952), Expect = 1.630e-127
Identity = 185/255 (72.55%), Postives = 219/255 (85.88%), Query Frame = 1
Query:   16 ETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELR 780
            E  PKI +  +HKSFG K +L+G  LDV   ES+V+IGGSGTGKSV+LK ILGL++P++G I IDGQ V  + + +RE+VN + GMLFQ+AALFDSLPVWENVAFGLIQGKGM R AA+E+AIEKLA VGLTADVG LSPAELSGGMRKRVGLARAIA  P+I+FFDEPTTGLDPIMG VI++LIV CV+Q+GATA++ITHDMASAR+IADR+AM+Y G++IW GPVADID SGN YVDQFI G AEGPI+ME+R
Sbjct:    3 EAVPKISVRGLHKSFGPKHVLRGLDLDVGVGESLVVIGGSGTGKSVLLKNILGLLQPDRGSIRIDGQEVVGMPRAEREQVNRKFGMLFQSAALFDSLPVWENVAFGLIQGKGMDRKAARELAIEKLADVGLTADVGNLSPAELSGGMRKRVGLARAIATTPEILFFDEPTTGLDPIMGDVINDLIVHCVRQLGATALSITHDMASARKIADRIAMIYHGEIIWHGPVADIDSSGNDYVDQFIHGRAEGPIRMEVR 257          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: UPI00115C78BA (ATP-binding cassette domain-containing protein n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115C78BA)

HSP 1 Score: 368 bits (945), Expect = 2.110e-126
Identity = 188/262 (71.76%), Postives = 222/262 (84.73%), Query Frame = 1
Query:    1 MTQPPETTP-KIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRK 783
            M Q P++ P KI L D+HKSFG K +L G TLDV   ESVVIIGGSGTGKSVMLKCILGLM P++G I IDG+    + + DRE+V  + GMLFQ AALFDSLPVWENVAFGLIQG+ M+R+ AKE AIEK+AQVGL+ADV AL P+ELSGGM+KRVGLARAIA +P+IIFFDEPTTGLDPIM  VI++LIVKCVK +GATAI+ITHDMASAR+IADR+AMLY+G++IW GPV+ ID+SGN YVDQFI G AEGPI+ME+R+
Sbjct:    1 MNQIPKSAPAKIELNDLHKSFGPKTVLNGVTLDVARGESVVIIGGSGTGKSVMLKCILGLMRPDRGSIRIDGEETVGMGQRDRERVLRKFGMLFQGAALFDSLPVWENVAFGLIQGQKMKRNEAKERAIEKMAQVGLSADVAALFPSELSGGMQKRVGLARAIATEPEIIFFDEPTTGLDPIMADVINDLIVKCVKDLGATAISITHDMASARKIADRVAMLYKGELIWVGPVSQIDNSGNAYVDQFIHGRAEGPIRMEIRR 262          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A1G6W736_9PROT (Phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1G6W736_9PROT)

HSP 1 Score: 360 bits (924), Expect = 2.870e-123
Identity = 183/256 (71.48%), Postives = 214/256 (83.59%), Query Frame = 1
Query:   19 TTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
            T  KI+L DVHK FG K++LQG  L+V   +SVVIIGGSGTGKSVMLKCILG++ P+QGEI +DG+ VT  S   R+K  A+ GMLFQ AALFDSLPVWENVAFGLIQGKGM R  A+E+AIEKL +VGL ADVG LSPAELSGGM+KRVGLARAIA +P+IIFFDEPTTGLDPIM  VI++LIV+CVK +GAT ++ITHDMASAR+IADR+AMLY GK+IWDG   +ID SGN +VDQFI G A+GPI+MEL KL
Sbjct:    3 TDLKIQLKDVHKGFGPKKVLQGIDLEVPKGQSVVIIGGSGTGKSVMLKCILGILNPDQGEIFVDGEDVTKFSSRARKKTLAKFGMLFQGAALFDSLPVWENVAFGLIQGKGMNRKDAQEIAIEKLRRVGLGADVGNLSPAELSGGMQKRVGLARAIATEPEIIFFDEPTTGLDPIMADVINDLIVECVKDLGATTLSITHDMASARKIADRIAMLYHGKIIWDGAKDEIDSSGNDHVDQFIHGRAQGPIEMELLKL 258          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A8J7N600_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N600_9PROT)

HSP 1 Score: 359 bits (921), Expect = 7.930e-123
Identity = 181/252 (71.83%), Postives = 211/252 (83.73%), Query Frame = 1
Query:   25 PKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELR 780
            PKIRL  V K FG K +L G  L+V P ESV+IIGGSGTGKSV LKCILGL+EP+ G IEIDG+ VT L+  +RE+VNA+IGMLFQ AALFDSLPVWENVAFGLI+GKG  R +AK  A++ LAQVGLTADVG + PA+LSGGMRKRVGLARA+   P+I+FFDEPTTGLDPIMG VI+ELIVK V ++GATA+TITHDMASAR+I  R+AMLYQG+++W GPVADID SGN +VDQFI G AEGPIKM +R
Sbjct:    5 PKIRLGGVKKRFGDKVVLDGVDLEVAPGESVIIIGGSGTGKSVTLKCILGLLEPDAGRIEIDGEDVTKLAGRERERVNAKIGMLFQGAALFDSLPVWENVAFGLIEGKGADRKSAKAEALKALAQVGLTADVGEMWPADLSGGMRKRVGLARAVCARPEILFFDEPTTGLDPIMGDVINELIVKTVHEMGATALTITHDMASARKIGHRIAMLYQGRIVWAGPVADIDRSGNAFVDQFIHGRAEGPIKMAVR 256          
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: UPI0003663F0F (ATP-binding cassette domain-containing protein n=1 Tax=Kordiimonas gwangyangensis TaxID=288022 RepID=UPI0003663F0F)

HSP 1 Score: 358 bits (920), Expect = 1.170e-122
Identity = 179/256 (69.92%), Postives = 214/256 (83.59%), Query Frame = 1
Query:   19 TTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
            +TP I+L +VHK FG K++L+G  L V   ES+VIIGGSGTGKSVMLKCILGL+EP  G I +DG+ VTHL    R++V  + GMLFQ AALFDSLPVWENVAFGLIQGKGM +  A+E+A EKL +VGL+ DVG LSPAELSGGM+KRVGLARAIA +P+IIFFDEPTTGLDPIM  VI++LIV+CVK +GAT ++ITHDMASAR+IADR+AMLYQG++IW+G  A++D SGN YVDQFI G A GPI+MELRKL
Sbjct:    3 STPMIQLENVHKHFGPKQVLRGIDLSVAKGESMVIIGGSGTGKSVMLKCILGLLEPTTGTIHVDGEDVTHLRGRARKEVLTKFGMLFQGAALFDSLPVWENVAFGLIQGKGMNKKDAREIATEKLRRVGLSPDVGLLSPAELSGGMQKRVGLARAIASEPEIIFFDEPTTGLDPIMADVINDLIVECVKDLGATTLSITHDMASARKIADRIAMLYQGEIIWEGAKAEVDTSGNDYVDQFIHGRAHGPIQMELRKL 258          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D9I0C6_9PROT1.770e-18098.09ABC transporter ATP-binding protein n=2 Tax=Rhodos... [more]
A0A7Y0HDX7_9PROT5.180e-15285.49ATP-binding cassette domain-containing protein n=1... [more]
A0A8J7V1K3_9PROT1.710e-13977.48ATP-binding cassette domain-containing protein n=1... [more]
A0A3S2Z9D8_9PROT7.190e-13677.38ATP-binding cassette domain-containing protein n=1... [more]
A0A3D9HVS6_9PROT1.550e-12970.77Phospholipid/cholesterol/gamma-HCH transport syste... [more]
A0A6N7FC40_9PROT1.630e-12772.55ATP-binding cassette domain-containing protein n=1... [more]
UPI00115C78BA2.110e-12671.76ATP-binding cassette domain-containing protein n=1... [more]
A0A1G6W736_9PROT2.870e-12371.48Phospholipid/cholesterol/gamma-HCH transport syste... [more]
A0A8J7N600_9PROT7.930e-12371.83ATP-binding cassette domain-containing protein n=1... [more]
UPI0003663F0F1.170e-12269.92ATP-binding cassette domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1050contigD-herbacea_F_contig1050:19869..20657 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score360.1
Seed ortholog evalue8.5e-97
Seed eggNOG ortholog1122137.AQXF01000002_gene91
Preferred namemkl
KEGG koko:K02065
KEGG TC3.A.1.27
KEGG Pathwayko02010,map02010
KEGG ModuleM00210,M00669,M00670
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ABC transporter
EggNOG OGs1MUSD@1224,2TR2I@28211,COG1127@1,COG1127@2
COG Functional cat.Q
Best tax levelAlphaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000
Exons1
Model size789
Cds size789
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927467.216764-CDS-D-herbacea_F_contig1050:19868..206571622927467.216764-CDS-D-herbacea_F_contig1050:19868..20657Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1050 19869..20657 -
1690790186.6079843-CDS-D-herbacea_F_contig1050:19868..206571690790186.6079843-CDS-D-herbacea_F_contig1050:19868..20657Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1050 19869..20657 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1050.575.1prot_D-herbacea_F_contig1050.575.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1050 19869..20657 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1050.575.1

>prot_D-herbacea_F_contig1050.575.1 ID=prot_D-herbacea_F_contig1050.575.1|Name=mRNA_D-herbacea_F_contig1050.575.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=263bp
MTQPPETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKS
VMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFD
SLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSG
GMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGAT
AITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGS
AEGPIKMELRKL*
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mRNA from alignment at D-herbacea_F_contig1050:19869..20657-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1050.575.1 ID=mRNA_D-herbacea_F_contig1050.575.1|Name=mRNA_D-herbacea_F_contig1050.575.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=789bp|location=Sequence derived from alignment at D-herbacea_F_contig1050:19869..20657- (Desmarestia herbacea DmunF female)
ATGACCCAGCCCCCTGAAACCACCCCGAAGATCCGATTGATCGATGTGCA TAAAAGCTTTGGGCAGAAGCGCATCCTGCAGGGATTCACACTGGATGTGA TGCCCCAGGAATCGGTTGTGATCATTGGCGGGTCCGGGACGGGCAAGTCG GTCATGCTGAAATGCATCCTGGGCCTGATGGAACCTGAACAGGGGGAAAT AGAAATCGATGGCCAGCCCGTCACCCACCTGTCCAAAGGGGACCGGGAAA AGGTCAATGCCAGGATTGGCATGCTGTTCCAGAATGCCGCCCTGTTTGAC AGCCTGCCGGTCTGGGAAAATGTTGCCTTTGGCCTGATCCAGGGTAAAGG CATGCGGCGGGACGCAGCAAAAGAGGTTGCGATTGAAAAGCTGGCCCAGG TGGGGCTGACCGCCGATGTCGGGGCCCTGTCCCCGGCGGAACTGTCAGGC GGCATGCGCAAGCGCGTCGGCCTGGCGCGCGCCATTGCGGGTGACCCCGA CATCATCTTCTTTGACGAGCCGACGACAGGCCTGGACCCGATCATGGGCC ATGTGATTGACGAATTGATCGTGAAATGCGTGAAACAGGTTGGCGCGACG GCGATCACCATCACCCATGATATGGCCAGCGCCAGGCGCATCGCGGACCG CATGGCGATGCTGTACCAGGGCAAGGTGATCTGGGACGGACCGGTCGCGG ATATCGACCATTCCGGCAATCCCTATGTCGATCAATTCATCACCGGCAGC GCCGAAGGCCCGATCAAGATGGAATTGCGGAAACTCTGA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1050:19869..20657-

>mRNA_D-herbacea_F_contig1050.575.1 ID=mRNA_D-herbacea_F_contig1050.575.1|Name=mRNA_D-herbacea_F_contig1050.575.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1578bp|location=Sequence derived from alignment at D-herbacea_F_contig1050:19869..20657- (Desmarestia herbacea DmunF female)
ATGACCCAGCCCCCTGAAACCACCCCGAAGATCCGATTGATCGATGTGCA
TAAAAGCTTTGGGCAGAAGCGCATCCTGCAGGGATTCACACTGGATGTGA
TGCCCCAGGAATCGGTTGTGATCATTGGCGGGTCCGGGACGGGCAAGTCG
GTCATGCTGAAATGCATCCTGGGCCTGATGGAACCTGAACAGGGGGAAAT
AGAAATCGATGGCCAGCCCGTCACCCACCTGTCCAAAGGGGACCGGGAAA
AGGTCAATGCCAGGATTGGCATGCTGTTCCAGAATGCCGCCCTGTTTGAC
AGCCTGCCGGTCTGGGAAAATGTTGCCTTTGGCCTGATCCAGGGTAAAGG
CATGCGGCGGGACGCAGCAAAAGAGGTTGCGATTGAAAAGCTGGCCCAGG
TGGGGCTGACCGCCGATGTCGGGGCCCTGTCCCCGGCGGAACTGTCAGGC
GGCATGCGCAAGCGCGTCGGCCTGGCGCGCGCCATTGCGGGTGACCCCGA
CATCATCTTCTTTGACGAGCCGACGACAGGCCTGGACCCGATCATGGGCC
ATGTGATTGACGAATTGATCGTGAAATGCGTGAAACAGGTTGGCGCGACG
GCGATCACCATCACCCATGATATGGCCAGCGCCAGGCGCATCGCGGACCG
CATGGCGATGCTGTACCAGGGCAAGGTGATCTGGGACGGACCGGTCGCGG
ATATCGACCATTCCGGCAATCCCTATGTCGATCAATTCATCACCGGCAGC
GCCGAAGGCCCGATCAAGATGGAATTGCGGAAACTCTGAATGACCCAGCC
CCCTGAAACCACCCCGAAGATCCGATTGATCGATGTGCATAAAAGCTTTG
GGCAGAAGCGCATCCTGCAGGGATTCACACTGGATGTGATGCCCCAGGAA
TCGGTTGTGATCATTGGCGGGTCCGGGACGGGCAAGTCGGTCATGCTGAA
ATGCATCCTGGGCCTGATGGAACCTGAACAGGGGGAAATAGAAATCGATG
GCCAGCCCGTCACCCACCTGTCCAAAGGGGACCGGGAAAAGGTCAATGCC
AGGATTGGCATGCTGTTCCAGAATGCCGCCCTGTTTGACAGCCTGCCGGT
CTGGGAAAATGTTGCCTTTGGCCTGATCCAGGGTAAAGGCATGCGGCGGG
ACGCAGCAAAAGAGGTTGCGATTGAAAAGCTGGCCCAGGTGGGGCTGACC
GCCGATGTCGGGGCCCTGTCCCCGGCGGAACTGTCAGGCGGCATGCGCAA
GCGCGTCGGCCTGGCGCGCGCCATTGCGGGTGACCCCGACATCATCTTCT
TTGACGAGCCGACGACAGGCCTGGACCCGATCATGGGCCATGTGATTGAC
GAATTGATCGTGAAATGCGTGAAACAGGTTGGCGCGACGGCGATCACCAT
CACCCATGATATGGCCAGCGCCAGGCGCATCGCGGACCGCATGGCGATGC
TGTACCAGGGCAAGGTGATCTGGGACGGACCGGTCGCGGATATCGACCAT
TCCGGCAATCCCTATGTCGATCAATTCATCACCGGCAGCGCCGAAGGCCC
GATCAAGATGGAATTGCGGAAACTCTGA
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