mRNA_D-herbacea_F_contig1050.575.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A2D9I0C6_9PROT (ABC transporter ATP-binding protein n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9I0C6_9PROT) HSP 1 Score: 505 bits (1300), Expect = 1.770e-180 Identity = 257/262 (98.09%), Postives = 258/262 (98.47%), Query Frame = 1
Query: 1 MTQPPETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
MTQ PETTPKIRL DVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRR AKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVA+IDHSGNPYVDQFITGSAEGPIKMELRKL
Sbjct: 1 MTQAPETTPKIRLTDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRGPAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVANIDHSGNPYVDQFITGSAEGPIKMELRKL 262
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A7Y0HDX7_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0HDX7_9PROT) HSP 1 Score: 433 bits (1113), Expect = 5.180e-152 Identity = 218/255 (85.49%), Postives = 234/255 (91.76%), Query Frame = 1
Query: 22 TPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
TPKIRL DVHKSFG K+IL+GF+LDVMPQESVVIIGGSGTGKSVMLKCILGL+ PEQGEIEIDGQP HLS DRE+VNA+IGMLFQNAALFDSLPVWENVAFGLIQGK M+R A ++AIEKLAQVGL ADVG +SPA+LSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVID LIVKCVK+VGATAI+ITHDM SARRIADRMAMLYQGKVIW GPV ID+SGN YVDQFI GSA+GPI+MEL KL
Sbjct: 6 TPKIRLKDVHKSFGPKQILRGFSLDVMPQESVVIIGGSGTGKSVMLKCILGLLSPEQGEIEIDGQPTVHLSNADREEVNAKIGMLFQNAALFDSLPVWENVAFGLIQGKRMKRKLAHDIAIEKLAQVGLGADVGKMSPADLSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDNLIVKCVKEVGATAISITHDMPSARRIADRMAMLYQGKVIWHGPVGQIDNSGNDYVDQFIHGSADGPIQMELLKL 260
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A8J7V1K3_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Marivibrio halodurans TaxID=2039722 RepID=A0A8J7V1K3_9PROT) HSP 1 Score: 401 bits (1031), Expect = 1.710e-139 Identity = 203/262 (77.48%), Postives = 225/262 (85.88%), Query Frame = 1
Query: 1 MTQPPETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
M+ T PKI+L V K FG K +L G L+V ES+VIIGGSGTGKSVMLKCILGL+ P+ GEIEIDG+P+T LS +RE VNARIGMLFQNAALFDSL VWENVAFGLIQGK M+R AKE+AI KLA VGL ADVGALSPAELSGGMRKRVGLARAIAGDP+IIFFDEPTTGLDPIMGH+IDELIV CV+QVGATAI+ITHDMASARRIADRMAMLY+G++IW GP A ID SGN YVDQF+ G+AEGPI+MELRKL
Sbjct: 1 MSDATPTVPKIKLAGVEKHFGTKTVLNGVDLEVAQGESLVIIGGSGTGKSVMLKCILGLLTPDAGEIEIDGRPITRLSTAEREAVNARIGMLFQNAALFDSLSVWENVAFGLIQGKRMKRARAKEIAIRKLADVGLDADVGALSPAELSGGMRKRVGLARAIAGDPEIIFFDEPTTGLDPIMGHIIDELIVHCVRQVGATAISITHDMASARRIADRMAMLYRGEIIWSGPAASIDDSGNAYVDQFVHGAAEGPIRMELRKL 262
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A3S2Z9D8_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A3S2Z9D8_9PROT) HSP 1 Score: 392 bits (1007), Expect = 7.190e-136 Identity = 195/252 (77.38%), Postives = 223/252 (88.49%), Query Frame = 1
Query: 22 TPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMEL 777
TPKI++ V K+FGQK +L F L+V+P+ESVVIIGGSG+GKSV LKC+LGL++P++G IEIDG V LS DRE+VN+RIGMLFQNAALFDSLPVWENVAFGLIQGK M R+ AK++AI+KLAQVGL ADV LSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGH+ID LIV+CV+ VGATA+TITHDM SARRI+DRMAMLY+GK IW GP A+ID+SGN YVDQFITGSAEGPI ME+
Sbjct: 6 TPKIKMTGVRKAFGQKVVLDSFDLEVLPRESVVIIGGSGSGKSVSLKCVLGLLQPDEGVIEIDGVDVGKLSHSDREEVNSRIGMLFQNAALFDSLPVWENVAFGLIQGKQMARNTAKDIAIDKLAQVGLGADVAVLSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHMIDNLIVECVRNVGATALTITHDMPSARRISDRMAMLYKGKNIWQGPTANIDNSGNDYVDQFITGSAEGPITMEV 257
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A3D9HVS6_9PROT (Phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HVS6_9PROT) HSP 1 Score: 376 bits (966), Expect = 1.550e-129 Identity = 184/260 (70.77%), Postives = 220/260 (84.62%), Query Frame = 1
Query: 4 TQPPETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRK 783
T P + +PKI + +V K+FG K +L GF LDVMP ESVVIIGGSGTGKSV LKCILGL+ P+ GEI+IDGQP+ LSK DR+ VNA+IGMLFQNAALFDS+ VWENVAF L+QG+GM R A+++A+EKL QVGL+A++G +PA+LSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGH+ID+LIVKCV++VGATA+TITHDMASARRIADR+ MLY+GK IW + +D SGNPYV QF+ G AEGPI + + K
Sbjct: 6 TAPVQASPKIAMRNVKKAFGSKVVLDGFDLDVMPGESVVIIGGSGTGKSVSLKCILGLLNPDSGEIDIDGQPILGLSKQDRDAVNAKIGMLFQNAALFDSISVWENVAFTLVQGEGMARSKARDIAMEKLGQVGLSAEIGERNPAQLSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHIIDKLIVKCVREVGATALTITHDMASARRIADRVTMLYKGKNIWTDRIEKLDSSGNPYVHQFVNGLAEGPIDLPILK 265
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A6N7FC40_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FC40_9PROT) HSP 1 Score: 371 bits (952), Expect = 1.630e-127 Identity = 185/255 (72.55%), Postives = 219/255 (85.88%), Query Frame = 1
Query: 16 ETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELR 780
E PKI + +HKSFG K +L+G LDV ES+V+IGGSGTGKSV+LK ILGL++P++G I IDGQ V + + +RE+VN + GMLFQ+AALFDSLPVWENVAFGLIQGKGM R AA+E+AIEKLA VGLTADVG LSPAELSGGMRKRVGLARAIA P+I+FFDEPTTGLDPIMG VI++LIV CV+Q+GATA++ITHDMASAR+IADR+AM+Y G++IW GPVADID SGN YVDQFI G AEGPI+ME+R
Sbjct: 3 EAVPKISVRGLHKSFGPKHVLRGLDLDVGVGESLVVIGGSGTGKSVLLKNILGLLQPDRGSIRIDGQEVVGMPRAEREQVNRKFGMLFQSAALFDSLPVWENVAFGLIQGKGMDRKAARELAIEKLADVGLTADVGNLSPAELSGGMRKRVGLARAIATTPEILFFDEPTTGLDPIMGDVINDLIVHCVRQLGATALSITHDMASARKIADRIAMIYHGEIIWHGPVADIDSSGNDYVDQFIHGRAEGPIRMEVR 257
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: UPI00115C78BA (ATP-binding cassette domain-containing protein n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115C78BA) HSP 1 Score: 368 bits (945), Expect = 2.110e-126 Identity = 188/262 (71.76%), Postives = 222/262 (84.73%), Query Frame = 1
Query: 1 MTQPPETTP-KIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRK 783
M Q P++ P KI L D+HKSFG K +L G TLDV ESVVIIGGSGTGKSVMLKCILGLM P++G I IDG+ + + DRE+V + GMLFQ AALFDSLPVWENVAFGLIQG+ M+R+ AKE AIEK+AQVGL+ADV AL P+ELSGGM+KRVGLARAIA +P+IIFFDEPTTGLDPIM VI++LIVKCVK +GATAI+ITHDMASAR+IADR+AMLY+G++IW GPV+ ID+SGN YVDQFI G AEGPI+ME+R+
Sbjct: 1 MNQIPKSAPAKIELNDLHKSFGPKTVLNGVTLDVARGESVVIIGGSGTGKSVMLKCILGLMRPDRGSIRIDGEETVGMGQRDRERVLRKFGMLFQGAALFDSLPVWENVAFGLIQGQKMKRNEAKERAIEKMAQVGLSADVAALFPSELSGGMQKRVGLARAIATEPEIIFFDEPTTGLDPIMADVINDLIVKCVKDLGATAISITHDMASARKIADRVAMLYKGELIWVGPVSQIDNSGNAYVDQFIHGRAEGPIRMEIRR 262
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A1G6W736_9PROT (Phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1G6W736_9PROT) HSP 1 Score: 360 bits (924), Expect = 2.870e-123 Identity = 183/256 (71.48%), Postives = 214/256 (83.59%), Query Frame = 1
Query: 19 TTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
T KI+L DVHK FG K++LQG L+V +SVVIIGGSGTGKSVMLKCILG++ P+QGEI +DG+ VT S R+K A+ GMLFQ AALFDSLPVWENVAFGLIQGKGM R A+E+AIEKL +VGL ADVG LSPAELSGGM+KRVGLARAIA +P+IIFFDEPTTGLDPIM VI++LIV+CVK +GAT ++ITHDMASAR+IADR+AMLY GK+IWDG +ID SGN +VDQFI G A+GPI+MEL KL
Sbjct: 3 TDLKIQLKDVHKGFGPKKVLQGIDLEVPKGQSVVIIGGSGTGKSVMLKCILGILNPDQGEIFVDGEDVTKFSSRARKKTLAKFGMLFQGAALFDSLPVWENVAFGLIQGKGMNRKDAQEIAIEKLRRVGLGADVGNLSPAELSGGMQKRVGLARAIATEPEIIFFDEPTTGLDPIMADVINDLIVECVKDLGATTLSITHDMASARKIADRIAMLYHGKIIWDGAKDEIDSSGNDHVDQFIHGRAQGPIEMELLKL 258
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: A0A8J7N600_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N600_9PROT) HSP 1 Score: 359 bits (921), Expect = 7.930e-123 Identity = 181/252 (71.83%), Postives = 211/252 (83.73%), Query Frame = 1
Query: 25 PKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELR 780
PKIRL V K FG K +L G L+V P ESV+IIGGSGTGKSV LKCILGL+EP+ G IEIDG+ VT L+ +RE+VNA+IGMLFQ AALFDSLPVWENVAFGLI+GKG R +AK A++ LAQVGLTADVG + PA+LSGGMRKRVGLARA+ P+I+FFDEPTTGLDPIMG VI+ELIVK V ++GATA+TITHDMASAR+I R+AMLYQG+++W GPVADID SGN +VDQFI G AEGPIKM +R
Sbjct: 5 PKIRLGGVKKRFGDKVVLDGVDLEVAPGESVIIIGGSGTGKSVTLKCILGLLEPDAGRIEIDGEDVTKLAGRERERVNAKIGMLFQGAALFDSLPVWENVAFGLIEGKGADRKSAKAEALKALAQVGLTADVGEMWPADLSGGMRKRVGLARAVCARPEILFFDEPTTGLDPIMGDVINELIVKTVHEMGATALTITHDMASARKIGHRIAMLYQGRIVWAGPVADIDRSGNAFVDQFIHGRAEGPIKMAVR 256
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Match: UPI0003663F0F (ATP-binding cassette domain-containing protein n=1 Tax=Kordiimonas gwangyangensis TaxID=288022 RepID=UPI0003663F0F) HSP 1 Score: 358 bits (920), Expect = 1.170e-122 Identity = 179/256 (69.92%), Postives = 214/256 (83.59%), Query Frame = 1
Query: 19 TTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSVMLKCILGLMEPEQGEIEIDGQPVTHLSKGDREKVNARIGMLFQNAALFDSLPVWENVAFGLIQGKGMRRDAAKEVAIEKLAQVGLTADVGALSPAELSGGMRKRVGLARAIAGDPDIIFFDEPTTGLDPIMGHVIDELIVKCVKQVGATAITITHDMASARRIADRMAMLYQGKVIWDGPVADIDHSGNPYVDQFITGSAEGPIKMELRKL 786
+TP I+L +VHK FG K++L+G L V ES+VIIGGSGTGKSVMLKCILGL+EP G I +DG+ VTHL R++V + GMLFQ AALFDSLPVWENVAFGLIQGKGM + A+E+A EKL +VGL+ DVG LSPAELSGGM+KRVGLARAIA +P+IIFFDEPTTGLDPIM VI++LIV+CVK +GAT ++ITHDMASAR+IADR+AMLYQG++IW+G A++D SGN YVDQFI G A GPI+MELRKL
Sbjct: 3 STPMIQLENVHKHFGPKQVLRGIDLSVAKGESMVIIGGSGTGKSVMLKCILGLLEPTTGTIHVDGEDVTHLRGRARKEVLTKFGMLFQGAALFDSLPVWENVAFGLIQGKGMNKKDAREIATEKLRRVGLSPDVGLLSPAELSGGMQKRVGLARAIASEPEIIFFDEPTTGLDPIMADVINDLIVECVKDLGATTLSITHDMASARKIADRIAMLYQGEIIWEGAKAEVDTSGNDYVDQFIHGRAHGPIQMELRKL 258 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1050.575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1050.575.1 >prot_D-herbacea_F_contig1050.575.1 ID=prot_D-herbacea_F_contig1050.575.1|Name=mRNA_D-herbacea_F_contig1050.575.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=263bp MTQPPETTPKIRLIDVHKSFGQKRILQGFTLDVMPQESVVIIGGSGTGKSback to top mRNA from alignment at D-herbacea_F_contig1050:19869..20657- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1050.575.1 ID=mRNA_D-herbacea_F_contig1050.575.1|Name=mRNA_D-herbacea_F_contig1050.575.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=789bp|location=Sequence derived from alignment at D-herbacea_F_contig1050:19869..20657- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1050:19869..20657- >mRNA_D-herbacea_F_contig1050.575.1 ID=mRNA_D-herbacea_F_contig1050.575.1|Name=mRNA_D-herbacea_F_contig1050.575.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1578bp|location=Sequence derived from alignment at D-herbacea_F_contig1050:19869..20657- (Desmarestia herbacea DmunF female)back to top |