mRNA_D-herbacea_F_contig105.557.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: D7G3C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C5_ECTSI) HSP 1 Score: 233 bits (594), Expect = 1.010e-71 Identity = 110/155 (70.97%), Postives = 136/155 (87.74%), Query Frame = 1
Query: 637 GKGESAQNRALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVPEGEQVLTNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGP 1101
GKGES +NRAL VVYLLPMLDG++CG ++F +P LG++V+ VLAPALA+WDNVPF+PLVMFI+L +S RRQ+TSRF+RFN+QQAILVDI T++LGLLG+A GY+ PEGEQ +TNFAFYCL+ AV YAVAET RG+ AN+IPLISA AE+Q+GP
Sbjct: 9 GKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGP 163
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A6H5LCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCJ5_9PHAE) HSP 1 Score: 231 bits (588), Expect = 7.500e-69 Identity = 109/154 (70.78%), Postives = 135/154 (87.66%), Query Frame = 1
Query: 640 KGESAQNRALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVPEGEQVLTNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGP 1101
KGES +NRAL VVYLLPMLDG++CG ++F +P LG++V+ VLAPALA+WDNVPF+PLVMFI+L +S RRQ+TSRF+RFN+QQAILVDI T++LGLLG+A GY+ PEGEQ +TNFAFYCL+ AV YAVAET RG+ AN+IPLISA AE+Q+GP
Sbjct: 151 KGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQIPLISAAAEIQLGP 304
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A835YUZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ7_9STRA) HSP 1 Score: 139 bits (350), Expect = 6.460e-35 Identity = 69/147 (46.94%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 661 RALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVPEGEQVLTNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGP 1101
R LA Y+LP+LDG+ G N++ +P +G VY VL PALA+W+ VPFL +F+ T +AR SR VRF++QQAIL+DI I+LGLL + + P G V FY LI+AV Y++ ++G+ NEIP+IS A+ QIGP
Sbjct: 76 RLLACFPYILPVLDGVGSGRNVYAAVPAVGEAVYGVLGPALAIWNGVPFLGFGVFLAFTFAARNTELSRLVRFSLQQAILIDIALIVLGLLENVTKAVAPGGADVFATLQFYILISAVAYSLVSNLQGKEPNEIPIISEAAQRQIGP 222
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A7S0I0B2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I0B2_9EUKA) HSP 1 Score: 114 bits (285), Expect = 1.260e-25 Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = 1
Query: 658 NRALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVP-EGEQVLTNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGP 1101
+RA AA VYL P+ DGI G+ LF +P GA+ +L A A +D++PF L+ FI L+ +R SRF+RFN+QQAIL+DI II G VG +VP E +QVL+N FY ++ A+GY+ +G+T +++P++S A IGP
Sbjct: 81 DRAFAAAVYLFPITDGIFFGKFLFTSVPVFGALCLPILQ-ASAAFDSIPFSGLIFFIGLSSMSRNPGLSRFLRFNLQQAILLDIAFIIPNFFGG-VGQMVPIEVQQVLSNTVFYSMVLAIGYSWFSIAQGKTPDQVPVVSEAANQAIGP 227
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A7S2CM34_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CM34_9EUKA) HSP 1 Score: 112 bits (279), Expect = 2.690e-25 Identity = 62/152 (40.79%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 652 AQNRALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVPEGEQVL-TNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGPL 1104
A +RA++A VY+LP+LDG G N++ P +G+ Y +L P + + NVPF L++FI L+ R++ SR+VRFNIQQA+L DI II + G A G + P Q + +NF +Y ++ V Y+ + +G++ + +P+IS A +QIGPL
Sbjct: 33 AADRAVSAAVYILPILDGFVFGSNIYATFPLVGSAAYKLL-PLVNTFQNVPFAGLILFIGLSTFTRKEGLSRYVRFNIQQALLTDIALIIPTVFGGA-GRMFPLELQAMGSNFVWYAMVTIVCYSWVQIAQGKSPDGVPVISEAAAIQIGPL 182
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A7S4ES88_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ES88_CHRCT) HSP 1 Score: 110 bits (276), Expect = 1.920e-24 Identity = 61/150 (40.67%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 652 AQNRALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVPEGEQVLTNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGP 1101
A R LA + Y+LP +DG G +++ +P +GA+ P +A ++++PF LV FI +++ R N SRFVRFNIQQA+L+DI I+ GL G E + + TNF FY + VGYA+ +G+ +++PL+S A MQIGP
Sbjct: 72 ALERVLATLPYVLPAIDGFAYGLYVYQNVPPIGAIAGAAF-PFVASFESIPFGGLVFFIGMSLFTRNPNLSRFVRFNIQQALLLDIALIVPGLFGPLTKTFPVELQILGTNFIFYAWVLVVGYALFSNAQGKAPDQVPLLSDAASMQIGP 220
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A7S2MZG4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MZG4_9EUKA) HSP 1 Score: 107 bits (268), Expect = 1.530e-23 Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = 1
Query: 649 SAQNRALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVPEGEQVL-TNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGPL 1104
+A R AA YL P+ DG G +++ +P LGA+ Y V APA+ +++VPFL L+ FI + +R SRFVRFN+QQA+L+DI II G +GSA + P QVL +N F ++ VGYA +G+ +++P++S A IGP+
Sbjct: 51 AAVERVAAAAAYLFPITDGFGFGGYIYQNVPPLGALAYQV-APAINAFNSVPFLGLIFFIAFSSFSRNTGLSRFVRFNLQQALLLDIALIIPGFVGSA-SQMFPVDLQVLGSNTVFEAMLLVVGYAWFSIAQGKVPDQVPVLSNAAFQSIGPM 201
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A7S4N5C0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N5C0_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.710e-23 Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 1
Query: 655 QNRALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAV-GYLVPEGEQV-LTNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGP 1101
Q+R + + YLLP+ DG G+ +F P L AV +AP D+VPFL L++F++L++ R + +R VRFN QQAILVDI I L+GS + G +P +NF +Y + A VGY+V +RG+ ++IP IS AEM +GP
Sbjct: 95 QDRIKSCIPYLLPLADGHHFGKYIFLNFPALRAVDEVTIAPLAHFLDSVPFLSLIVFLVLSLGTRNSDMARGVRFNAQQAILVDIALIFPELIGSGMDGVAMPTVLMASASNFVWYFMTACVGYSVVNNLRGKKPDQIPFISNAAEMAVGP 245
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A7S2ZG79_9RHOD (Tic20 family protein Ycf60 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZG79_9RHOD) HSP 1 Score: 105 bits (263), Expect = 8.380e-23 Identity = 61/156 (39.10%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 637 GKGESAQNRALAAVVYLLPMLDGIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFI-LLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVPEGEQVLTNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGP 1101
GK E ++R + + Y LP+LD ++ G LF+ P +V LAP A++ +PFL L +F + + R N +RF+R+N QQAI++D+ II L G A + + N FY ++AAVGYAV E +RG N+IPL+S + QIGP
Sbjct: 50 GKPEG-KDRFFSILPYFLPLLDSLQYGSYLFQKFPVFKELVLYPLAPFYAIYRGIPFLDLAIFFGVFFLVVRNTNINRFIRYNAQQAIMLDLILIIPALFGGAAAQMPRFIAETGANTVFYSILAAVGYAVIENIRGELPNKIPLVSESVDSQIGP 204
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Match: A0A7S3AEW9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AEW9_9EUKA) HSP 1 Score: 103 bits (258), Expect = 2.440e-22 Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = 1
Query: 703 GIECGENLFRVMPELGAVVYTVLAPALAVWDNVPFLPLVMFILLTISARRQNTSRFVRFNIQQAILVDIGTIILGLLGSAVGYLVPEGEQVL-TNFAFYCLIAAVGYAVAETVRGRTANEIPLISAVAEMQIGP 1101
G G +++ +P +G V YT L P + + +VPF V+FI L+ R N SRFVRFNIQQAIL+DI II G+L A G + PE V+ +NF FY + VGY+V V+G+T +++P++S A MQIGP
Sbjct: 52 GFPYGAYIYQSVPPVGEVAYTFL-PFVNAFQSVPFAGFVLFIGLSTFTRNMNLSRFVRFNIQQAILLDILIIIPGILSGATG-MFPEVLNVMGSNFVFYVMALVVGYSVFSNVQGKTPDQVPILSEAAGMQIGP 183 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig105.557.1 >prot_D-herbacea_F_contig105.557.1 ID=prot_D-herbacea_F_contig105.557.1|Name=mRNA_D-herbacea_F_contig105.557.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=296bp MRPNAPAAAAIAAAAVVHLVAHGVGSVNAFCVAYRPLASSVRTAGAPQAMback to top mRNA from alignment at D-herbacea_F_contig105:747462..751614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig105.557.1 ID=mRNA_D-herbacea_F_contig105.557.1|Name=mRNA_D-herbacea_F_contig105.557.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=4153bp|location=Sequence derived from alignment at D-herbacea_F_contig105:747462..751614+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig105:747462..751614+ >mRNA_D-herbacea_F_contig105.557.1 ID=mRNA_D-herbacea_F_contig105.557.1|Name=mRNA_D-herbacea_F_contig105.557.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1776bp|location=Sequence derived from alignment at D-herbacea_F_contig105:747462..751614+ (Desmarestia herbacea DmunF female)back to top |