mRNA_D-herbacea_F_contig105.541.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig105.541.1
Unique NamemRNA_D-herbacea_F_contig105.541.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: D8LSE6_ECTSI (NUOE homolog, NADH dehydrogenase (Ubiquinone) subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE6_ECTSI)

HSP 1 Score: 497 bits (1279), Expect = 6.990e-176
Identity = 242/281 (86.12%), Postives = 256/281 (91.10%), Query Frame = 2 
Query:    2 MALRTIGAAARGLSSRRTCPSRSMPLVVNASAVRKLHNTASACDEVHPLGQHRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKDLEKKVDPASVKEHMCY 844
            MALRTIGAA R L+SRR C  R+   V   SA R +H T SA DEVH LGQH+DTPDNNE TFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCM+CGSE+IKKTIMD+LGIKNGGTT DGMF+LLEVECLGACANAPMVQINDDYFECLTP+TMK+LL+ CK GE PEMGRWGSLPLNGQVSCEGP+GKTSL G PTGPGFMMRKDLE+KVDP SVK+HMCY
Sbjct:    1 MALRTIGAATRALASRRPCTVRAPATV---SAERNVHRTVSARDEVHQLGQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGGTTADGMFTLLEVECLGACANAPMVQINDDYFECLTPETMKELLEKCKNGETPEMGRWGSLPLNGQVSCEGPHGKTSLEGTPTGPGFMMRKDLEQKVDPKSVKDHMCY 278
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: A0A835YYT9_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT9_9STRA)

HSP 1 Score: 380 bits (977), Expect = 4.400e-130
Identity = 177/254 (69.69%), Postives = 212/254 (83.46%), Query Frame = 2 
Query:   83 VNASAVRKLHNTASACDEVHPLGQHRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKDLEKKVDPASVKEHMCY 844
            V   A R +H + S+    H LG+H+D P N   T F+F+DEN+  VEKI+AKYPANYRQA+ IPLLDLAQRQ+GGWLPLAAM KVA ++G   M++YEVATFYTMFNREKRG++FIQLCGTTPCM+CGS +IKKTI ++LGIK+G TT DG+F+LLEVECLG+CANAPM+Q+NDDY+ECLTP+TMK+L+  CK G  P MG+WGSLP+NGQVSCEGP+GKTSL+  P GPGFMMRKDLE KVDPASVK HM Y
Sbjct:   16 VGGQAARGIHASRSSLGG-HVLGKHKDAPGNTTDTHFEFSDENFELVEKILAKYPANYRQAAAIPLLDLAQRQNGGWLPLAAMNKVAAVIGVQPMRIYEVATFYTMFNREKRGQYFIQLCGTTPCMVCGSNDIKKTITEELGIKDGETTADGLFTLLEVECLGSCANAPMIQLNDDYYECLTPQTMKELIAACKAGNPPAMGKWGSLPMNGQVSCEGPHGKTSLTEPPPGPGFMMRKDLEPKVDPASVKAHMSY 268
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: A0A7S2FXN0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXN0_9STRA)

HSP 1 Score: 358 bits (918), Expect = 6.390e-121
Identity = 174/258 (67.44%), Postives = 203/258 (78.68%), Query Frame = 2 
Query:  101 RKLHNTASACDEVHPLGQHRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKDL----------EKKVDPASVKEHMCY 844
            R LH++ +A    H   QH+ T +NN  TFFDFT+ENY  VE ++ KYP NY+QA IIPLLDLAQRQ+GGWLPLAAM+ VAK+V    M+VYEVATFYTMFNREKRGK+FIQLCGTTPCM+CGSE+IK+TIMD+LGI +G TT DG+F+LLEVECLGACANAPM+Q+NDDY+ECLTPKTM +LL LCK G  PEMG+WGSLP+NGQVSCEGP GKTSL   P  P   +R D+          E  VDP SVKEHMCY
Sbjct:   26 RSLHSSRAAAGG-HATSQHQHTDENNSQTFFDFTEENYKLVENVLGKYPGNYKQAGIIPLLDLAQRQNGGWLPLAAMDCVAKVVEVPPMRVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKQTIMDELGIHDGETTDDGLFTLLEVECLGACANAPMIQMNDDYYECLTPKTMTELLKLCKDGSPPEMGKWGSLPMNGQVSCEGPQGKTSLFDGPPPPA-PLRTDMFGDPAWKPGAEGSVDPVSVKEHMCY 281
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: A0A7S4E2R0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2R0_9STRA)

HSP 1 Score: 357 bits (916), Expect = 2.660e-120
Identity = 173/252 (68.65%), Postives = 200/252 (79.37%), Query Frame = 2 
Query:   89 ASAVRKLHNTASACDEVHPLGQHRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKDLEKKVDPASVKEHMCY 844
            A+A+ +    A      HPL QH D PDN   T FDFT EN+ R E I+ KYPANYR + IIPLLDLAQRQHGGWLP+AAM+KVA +VG   M+VYEVATFYTMFNRE  GK+FIQLCGTTPCM+CGSE IKK I D LGI+ G TTKDG+F+L EVECLGACANAPMVQ+NDDY+ECLTPK++ +LL+ CK+GEK EMGRWGSLP+NGQVSCEGP GKTSL   P  P + MR+DL+ +VDPASVK HM Y
Sbjct:   52 AAALARRGPRARRLSNFHPLAQHVDRPDNKVETPFDFTPENHIRAEHILGKYPANYRASGIIPLLDLAQRQHGGWLPVAAMDKVAALVGVAPMRVYEVATFYTMFNREPVGKYFIQLCGTTPCMVCGSEAIKKAIEDHLGIQEGETTKDGLFTLREVECLGACANAPMVQMNDDYYECLTPKSVVELLEACKRGEKHEMGRWGSLPMNGQVSCEGPRGKTSLGNGPPAP-YAMREDLKGEVDPASVKAHMGY 302
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: A0A7S2MPT9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MPT9_9STRA)

HSP 1 Score: 353 bits (906), Expect = 2.120e-119
Identity = 167/230 (72.61%), Postives = 193/230 (83.91%), Query Frame = 2 
Query:  155 HRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKDLEKKVDPASVKEHMCY 844
            H DTPDN   T FDFT ENY RV+ I+AK+PANY+QA IIPLLDLAQRQHGGWLP+AAM+KVA+IV  +  +VYEVA+FYTMFNR KRGK+F+QLCGTTPCM+CGSE+IKKTI D LGIKNG TTKDGMF+LLEVECLGACANAPM+Q+NDDY+ECLTPKT  +LL+ CK+GE P MG+WGSLP+NGQVSCEGP GKT+L  EP  P     +  + KVDP SVKEHM Y
Sbjct:   32 HLDTPDNTVETKFDFTIENYKRVDSILAKFPANYKQAGIIPLLDLAQRQHGGWLPVAAMDKVAQIVDTNPARVYEVASFYTMFNRTKRGKYFLQLCGTTPCMICGSEDIKKTIEDHLGIKNGETTKDGMFTLLEVECLGACANAPMIQMNDDYYECLTPKTTIELLEACKRGEPPAMGKWGSLPMNGQVSCEGPLGKTALFEEPVPPKVEEGRFKDGKVDPVSVKEHMAY 261
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: A0A7S1TPK0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPK0_9STRA)

HSP 1 Score: 350 bits (899), Expect = 2.280e-118
Identity = 169/244 (69.26%), Postives = 195/244 (79.92%), Query Frame = 2 
Query:  119 ASACDEVHPLGQHRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKD--LEKKVDPASVKEHMCY 844
            A A     P+GQHR T +NN+ T FDFTDENYARVE ++ KYP NY+Q+ IIPLLDLAQRQ+GGWLP+AAM+KVA I G   M+VYEVATFYTMFNRE  GK+FIQLCGTTPCM+CGSEEIKKTI +  G K G T+ DG+++L EVECLGACANAPM+Q+NDDY+ECLTP+T   LLD CK G+KP MG WGSLP+NGQVSCEGP GKT  +  P GPGF MR D  L+  VDPASVKEHM Y
Sbjct:   16 ARAMSGYKPIGQHRPTAENNDETVFDFTDENYARVEYVLGKYPENYKQSGIIPLLDLAQRQNGGWLPVAAMDKVASICGIDPMRVYEVATFYTMFNREPVGKYFIQLCGTTPCMVCGSEEIKKTIEEHTGCKEGTTSADGLWTLREVECLGACANAPMIQLNDDYYECLTPETTIALLDACKAGKKPPMGAWGSLPMNGQVSCEGPLGKTCNTEAPPGPGFGMRPDSELQGTVDPASVKEHMGY 259
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: A0A7S1DC55_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DC55_CYCTE)

HSP 1 Score: 347 bits (891), Expect = 5.680e-117
Identity = 166/231 (71.86%), Postives = 195/231 (84.42%), Query Frame = 2 
Query:  155 HRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSG-EPTGPGFMMRKDLEKKVDPASVKEHMCY 844
            H DT DN  A  FDFT+ENYARV+KI++KYPANY+QA IIPLLDLAQRQHGGWLP+AAM+KVA+IVG    +VYEVA+FYTMFNR K GKHFIQLCGTTPCM+CGSE+IK+TI   LGIKNG TTKDG+F+LLEVECLGACANAPMVQ+NDDY+ECLTP+T  +LL+ CK+GE P MG+WGSLP+NGQVSCEGP GKTSL+  EP  P     +  + +VDPASVK++M Y
Sbjct:   41 HIDTEDNTVAVKFDFTEENYARVDKILSKYPANYKQAGIIPLLDLAQRQHGGWLPVAAMDKVAQIVGAAPSRVYEVASFYTMFNRTKVGKHFIQLCGTTPCMICGSEDIKQTIEKHLGIKNGETTKDGLFTLLEVECLGACANAPMVQLNDDYYECLTPETTIELLEACKRGETPPMGKWGSLPMNGQVSCEGPKGKTSLTWKEPVAPTVDPNRFKDGEVDPASVKDNMAY 271
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: K0R6F7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6F7_THAOC)

HSP 1 Score: 344 bits (883), Expect = 1.270e-115
Identity = 171/261 (65.52%), Postives = 201/261 (77.01%), Query Frame = 2 
Query:   62 SRSMPLVVNASAVRKLHNTASACDEVHPLGQHRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKDLEKKVDPASVKEHMCY 844
            SR +P    A+A R+  +  SA         H +TPDN   T+FDFT+ENY  V KI++KYPANY+Q+ IIPLLDLAQRQHGGWLP+AAM+KVA IV     +VYEVA+FYTMFNR K GK+FIQLCGTTPCM+CGSE+IKKTI + LGIKNG TT+DGMF+LLEVECLGACANAPM+Q+NDDY+ECLTPKT  +LLD CK+GE P MG+WGSLP+NGQVSCEGP GKTSL   P  P     +  +  VDPASVK HM Y
Sbjct:   26 SRRLPTAAAATAGRQTRSMGSA------QSFHINTPDNTVETYFDFTEENYKLVNKILSKYPANYKQSGIIPLLDLAQRQHGGWLPVAAMDKVASIVEAAPSRVYEVASFYTMFNRTKVGKYFIQLCGTTPCMICGSEDIKKTIENHLGIKNGETTEDGMFTLLEVECLGACANAPMIQMNDDYYECLTPKTTIELLDACKRGEPPTMGKWGSLPMNGQVSCEGPLGKTSLWTVPDPPKVDPDRFKDGSVDPASVKVHMSY 280
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: A0A6S9HNE8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9HNE8_9STRA)

HSP 1 Score: 343 bits (881), Expect = 1.330e-115
Identity = 163/230 (70.87%), Postives = 190/230 (82.61%), Query Frame = 2 
Query:  155 HRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKDLEKKVDPASVKEHMCY 844
            H DTPDN   T FDFT ENY RV+ I++KYPANY+QA IIPLLDLAQRQHGGWLP+AAM+KVA+IV     +VYEVA+FYTMFNR K GK+F+QLCGTTPCM+CGSE+IK+TI   LGIKNG TTKDG+F+LLEVECLGACANAPM+Q+NDDY+ECLTPKT  +LL+ CK+G+ P MG+WGSLP+NGQVSCEGP GKTSL  EP  P     +  + KVDPASVK HM Y
Sbjct:   32 HLDTPDNTVETKFDFTIENYKRVDSILSKYPANYKQAGIIPLLDLAQRQHGGWLPVAAMDKVAQIVETDPARVYEVASFYTMFNRTKTGKYFLQLCGTTPCMICGSEDIKQTIESHLGIKNGETTKDGLFTLLEVECLGACANAPMIQMNDDYYECLTPKTTIELLEACKEGKPPVMGKWGSLPMNGQVSCEGPLGKTSLLSEPEPPKVEEGRFKDGKVDPASVKAHMAY 261
[Close]
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Match: A0A7S2WTS6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2WTS6_9STRA)

HSP 1 Score: 341 bits (874), Expect = 1.160e-114
Identity = 169/254 (66.54%), Postives = 194/254 (76.38%), Query Frame = 2 
Query:   62 SRSMPLVVNASAVRKLHNTASACDEVHPLGQHRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQHGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQINDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTSLSGEPTGPGFMMRKDLEKKVDPAS 823
            SR +P    +S  R +   AS          H +TPDN   T+FDFTDENY RV KI++KYPANY+Q+ IIPLLDLAQRQHGGWLP+AAM+KVA+IVG    +VYEVA+FYTMFNR K GK+FIQLCGTTPCM+CGSE+IKKTI   LGIKNG TTKDGMF+LLEVECLGACANAPM+Q+NDDY+ECLTPKT   LL+ CK G  P MG+WGSLP+NGQVSCEGP GKTSL   P  P     +  E KVDPAS
Sbjct:    9 SRRLPSAAASSQTRSMGTAASF---------HINTPDNTPETYFDFTDENYKRVNKILSKYPANYKQSGIIPLLDLAQRQHGGWLPVAAMDKVAEIVGAAPSRVYEVASFYTMFNRTKVGKYFIQLCGTTPCMICGSEDIKKTIEKHLGIKNGETTKDGMFTLLEVECLGACANAPMIQLNDDYYECLTPKTTVDLLEACKVGNPPAMGKWGSLPMNGQVSCEGPLGKTSLFEPPLPPKIDESRFSEGKVDPAS 253
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig105.541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE6_ECTSI6.990e-17686.12NUOE homolog, NADH dehydrogenase (Ubiquinone) subu... [more]
A0A835YYT9_9STRA4.400e-13069.69NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2FXN0_9STRA6.390e-12167.44Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4E2R0_9STRA2.660e-12068.65Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2MPT9_9STRA2.120e-11972.61Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1TPK0_9STRA2.280e-11869.26Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1DC55_CYCTE5.680e-11771.86Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
K0R6F7_THAOC1.270e-11565.52Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6S9HNE8_9STRA1.330e-11570.87Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2WTS6_9STRA1.160e-11466.54Hypothetical protein (Fragment) n=2 Tax=Ochrophyta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig105contigD-herbacea_F_contig105:370563..383759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score502.7
Seed ortholog evalue1.1e-139
Seed eggNOG ortholog2880.D8LSE6
Preferred nameNdufv2
KEGG rclassRC00061
KEGG koko:K03347,ko:K03943,ko:K10609
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko03420,ko04110,ko04111,ko04114,ko04120,ko04141,ko04310,ko04340,ko04341,ko04350,ko04710,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,ko05168,ko05200,map00190,map01100,map03420,map04110,map04111,map04114,map04120,map04141,map04310,map04340,map04341,map04350,map04710,map04714,map04723,map04932,map05010,map05012,map05016,map05168,map05200
KEGG ModuleM00143,M00379,M00380,M00381,M00382,M00385,M00386,M00387,M00407,M00411
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008137,GO:0008150,GO:0008152,GO:0008270,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0046872,GO:0046914,GO:0050136,GO:0050896,GO:0055086,GO:0055114,GO:0070469,GO:0071704,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.NADH dehydrogenase (quinone) activity
EggNOG OGsCOG1905@1,KOG3196@2759
Ec32 ortholog descriptionNUOE homolog, NADH dehydrogenase (ubiquinone) subunit
Ec32 orthologEc-21_003400.1
EC1.6.5.3,1.6.99.3
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400,ko04121,ko04147
Exons6
Model size989
Cds size846
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig105.541.1prot_D-herbacea_F_contig105.541.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig105 370564..383617 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927463.2145398-UTR-D-herbacea_F_contig105:370562..3705631622927463.2145398-UTR-D-herbacea_F_contig105:370562..370563Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig105 370563..370563 +
1690790184.2331002-UTR-D-herbacea_F_contig105:370562..3705631690790184.2331002-UTR-D-herbacea_F_contig105:370562..370563Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig105 370563..370563 +
1622927463.2953749-UTR-D-herbacea_F_contig105:383617..3837591622927463.2953749-UTR-D-herbacea_F_contig105:383617..383759Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig105 383618..383759 +
1690790184.3194087-UTR-D-herbacea_F_contig105:383617..3837591690790184.3194087-UTR-D-herbacea_F_contig105:383617..383759Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig105 383618..383759 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927463.2263837-CDS-D-herbacea_F_contig105:370563..3707161622927463.2263837-CDS-D-herbacea_F_contig105:370563..370716Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 370564..370716 +
1690790184.2466035-CDS-D-herbacea_F_contig105:370563..3707161690790184.2466035-CDS-D-herbacea_F_contig105:370563..370716Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 370564..370716 +
1622927463.239861-CDS-D-herbacea_F_contig105:373632..3737791622927463.239861-CDS-D-herbacea_F_contig105:373632..373779Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 373633..373779 +
1690790184.2634737-CDS-D-herbacea_F_contig105:373632..3737791690790184.2634737-CDS-D-herbacea_F_contig105:373632..373779Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 373633..373779 +
1622927463.249991-CDS-D-herbacea_F_contig105:374871..3750911622927463.249991-CDS-D-herbacea_F_contig105:374871..375091Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 374872..375091 +
1690790184.2736099-CDS-D-herbacea_F_contig105:374871..3750911690790184.2736099-CDS-D-herbacea_F_contig105:374871..375091Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 374872..375091 +
1622927463.2595444-CDS-D-herbacea_F_contig105:379241..3793181622927463.2595444-CDS-D-herbacea_F_contig105:379241..379318Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 379242..379318 +
1690790184.2869678-CDS-D-herbacea_F_contig105:379241..3793181690790184.2869678-CDS-D-herbacea_F_contig105:379241..379318Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 379242..379318 +
1622927463.2688253-CDS-D-herbacea_F_contig105:379760..3798931622927463.2688253-CDS-D-herbacea_F_contig105:379760..379893Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 379761..379893 +
1690790184.2988865-CDS-D-herbacea_F_contig105:379760..3798931690790184.2988865-CDS-D-herbacea_F_contig105:379760..379893Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 379761..379893 +
1622927463.2825565-CDS-D-herbacea_F_contig105:383501..3836171622927463.2825565-CDS-D-herbacea_F_contig105:383501..383617Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 383502..383617 +
1690790184.3092935-CDS-D-herbacea_F_contig105:383501..3836171690790184.3092935-CDS-D-herbacea_F_contig105:383501..383617Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig105 383502..383617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig105.541.1

>prot_D-herbacea_F_contig105.541.1 ID=prot_D-herbacea_F_contig105.541.1|Name=mRNA_D-herbacea_F_contig105.541.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=282bp
MALRTIGAAARGLSSRRTCPSRSMPLVVNASAVRKLHNTASACDEVHPLG
QHRDTPDNNEATFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQ
HGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTT
PCMMCGSEEIKKTIMDDLGIKNGGTTKDGMFSLLEVECLGACANAPMVQI
NDDYFECLTPKTMKQLLDLCKKGEKPEMGRWGSLPLNGQVSCEGPNGKTS
LSGEPTGPGFMMRKDLEKKVDPASVKEHMCY*
back to top

mRNA from alignment at D-herbacea_F_contig105:370563..383759+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig105.541.1 ID=mRNA_D-herbacea_F_contig105.541.1|Name=mRNA_D-herbacea_F_contig105.541.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=13197bp|location=Sequence derived from alignment at D-herbacea_F_contig105:370563..383759+ (Desmarestia herbacea DmunF female)
CATGGCGTTGCGCACGATAGGAGCGGCGGCACGGGGCCTGTCTTCGAGAA
GAACATGCCCTTCTCGGTCTATGCCGTTGGTGGTGAACGCTAGTGCTGTG
AGAAAACTCCACAACACCGCTTCTGCGTGCGACGAAGTGCACCCATTGGG
ACAGGTGAAGGATTTTGGCAACTCGCAGAGAGAGAGAGAGAGAGAGGGAG
AGAGATGCGTGTTGTTTGTTGTGCGTTAGCTTTGATTATTGTTGCCACAA
CGAACAAGGACAGTATACATTATGTTAGACGTCTAATACTTTATCGTATG
CGTTTACTGAGCCTTAGCATTGTCACGTCCCTACATAGCACTAGATGTCG
TGCGCTGTGGTTTGCGGTCATCTGGTTTGGTGGTGGTAACGGCTCCCACC
GCAGAGCTAATTTATACGTACAGCTCTATGCTTGTTCCTGTGCCGCCGCC
TTTGCCTTACAGAGTAACAGGTATACCATAGAGGCGAGTACGAGTACCGT
AATACTTGTGTAATTGTATACTTGTTGGAGTCGAAGTTCGCTGCTGACCT
GCAGGGTTGGATGTTGGATGTGCCAGGAGCCGTCTTTGCCACTGTTTCCC
AATCTGGCCGCATCAGTGCAATACTTAGAAATTCACTGTCCCCACGATAG
CATAGCTCGGCACAACGTGTGTTTTGCCGCAAAATAGTGTTGTGCGCTCT
GCTGCGGGTTGGGGCTACCCACATCCAACAGGCGCCGCAGCATGGATGTG
ATATGTTTGTGCATGATAATCACCTCTTGCCATGCAGGGCAGAGGTGTAG
GGCATTTTTGCGAAAGGCACATGGCAAGAAACAAGAAACCTGTGTGTAGG
TAACGCACAACACTACATATCACACAGTAGTTGCTCTGCGAGATAGATGC
CGCTACGGACTGAGGCTTGCTAAGGGTACGCCTTGTATGAATAAAGCTTA
TTAAAGGAAACCGTGGAAGTTTGTGAGGTCATTTTGTCATTGGTCCTTTT
TTACCAGGGCTTTATACTCGGGTCCCGTCCCGTACGATTTTTTTTGGACA
CGTGTCCTGTTCCGTCCCATACAAATCCCAAAGTCGCGTCCCGTCCCGTA
GTGCACCTTCAGAACGGGACCGCGCCCCGTCCCGTCCCGTACGAACTCTC
GAAAGTCCCGTCCCAACGGGACTTCTCACAGGATATACCGTACAATATCC
CACGGGAATTCCCTACGGGACTGTGCTAGGACACTGTTTTCGAGTTATTG
TGGAACGACCCCCTTGCAATATCAGTAACGTGGATACTATGTGCCTACCA
TAGACGGCTCGGGAAAGACCTGGTGATTTTCGATTACTTTGGTGGCTTTG
GTTGGTGGTTCCTTTTTTCACTGCGTTGCCCGCGGGTCGTCATTCTGACA
GCACTTCAGACGGCAGTAGTAGTTGTGTTGTTCTCTTTGTTTTGCTTTTA
TTTCTCGACAACCGTGCTTCGTATACGGTGCAGGCAGCACTTCAGACAGC
AACTGCTGTAGCCAGCAGCCACGAATTGGTTAGTAGTGGGAACGGGGGGA
GAACACAGTAGTGGATGTCGTAGTCGAATGGATACCTGTGGTAGTGTTAG
TAGTTCAGTTTACACACCGCCCAGTGTGAGTTGGAGTACCTATTTGGTCC
TGTGTACCCCTTCTTTTTGCTTTAATCTGTGTTTTCCAGATCTCCTTACA
TAGGGCTCAGCACTTTTGTGACCACGGGCTAGATCTTGGACGATGAGCTA
ATGTGATGAAATCAACAACAACTGTTTTCGAGTTAAAAAGGGCGTTCTGA
ATCTCACAGAACCTTCTGCATGCATTGTGCTCTATACATGTTTAGGACCT
GTCTATACCATGCGTCATCACGCTCATTGTGACAACGACAGTAGTGAGTA
GTACTACAGTAGTGCATGAAGCCTGGTTATCCTCAAGACCACGACTTCTA
CGCAGACCGCCCGCGCACCCTGATACCATACCAACCAAATCAATTGGGGA
GGGCAGTGCTAGCTTAACCTGTAACCTGTCAGGTTGCAATACGTATCGTT
AGAGTAACATAGTGCTAGCGGGGTAAATGGAATGCCCCGTGCGGCACCGG
CGAGAGCTTGGCTGAGAGTATTGCTTGATGCATTATACGCGGTGTGCAGG
GAGTTGCGTTAACCGTGTAGTAGTAGTAGGATTACGACTACCACTGCTAT
TGCCCCGTATACAGCACGCAGCATGCTTGTTTGTTTTTCGGTGCGGTTTT
TGTTCCCTCCCACCGATTTTACTTGTCAGTTCGGCTCACAGGTTCTGTCG
TTAATGCACTTTCTGAGGAAGATGTTGTCACGAGTGTGCTCCATTCCTTT
CTCGGTACTTTACTTGGAATTTTATGGCGCACAGGGTTGGGCATTTCCAT
AGTTCGTCGAGTTTGCAATTTTACCATCGGAGTTATCTTAGCAGCTTCAT
ACGTCGTAACCGGATACTATATAATACTGTATATGGCCGATTAGCACTCC
TGTTATAGAACACAGCGTTGCTTTTTACAGCACGAGAGCCTCGTAGGCCG
TAAGCTCTGAAGATAGCCGCTCGGAGAGACAAGGTTGAACGTCGCCCCCT
CAGGGTTAGTGTAAGACTTGCCGAAGCTCACCCACTAAAAAAAATAATAC
TATTGTAGTACGCTTTGCCCGCTGTACTCAGTCAAGTTGCGGTCCTCCCT
ATCCGTTCGGGCGCTGGCAACGGCGGCCCCGCGCCAGGGGTAGTATAGAT
TGGTGCGTTTGGGGAGGCCAGGGCTGCTATTTTTTGCCGGTGGAAGACCT
TGAACAATGTAACACAGATATATACCACTTTTGCCTGAAACGCGCAGAGG
AAGCATACATACCTGTATAGTTGGACAGTAAACACGAGCGAGCTCACCCT
AACTCTTGATGCCACTGATTTTGCCTGTGCTTGAGGACATGCTTGCGCTC
GTGATCTTATTATTCACGGTGTGAATCCTCAAGTATTACCCCGCCATAGC
CTGGCGTTACGTTTGGTGCTTCGCTCGACCGTTTTTGTTAACCATATTCG
TTGTTCGTTTTTTTCTGCAGCACCGCGACACCCCCGACAACAACGAGGCG
ACGTTCTTCGACTTTACCGACGAAAACTACGCCCGAGTGGAGAAGATCAT
GGCTAAGTACCCCGCGAACTACCGCCAAGCTTCCATCATTCCCCTCCTAG
ACCTGGCGCAGAGGCAGGCGAGAAAGAAATAAAATAATAAGTAGAGCTGC
CGGCGCTTTTATATAGACACCAAGCAGCATTTTGCGCCCTTATCGTCGAC
AGGGTCTTACGAGTTTTTTTTTACTTGGTTTTAGTATGGTGTGGTCGTTA
GGTGAGGGTTAGGGTTAGTTATAGAAAACGTTCTGAACTGCTGAACAGCC
CACATCGGCACTATTATATTACCAGTAGGCGCCACGGCGTTGCCCGTGCA
ATGTGTGTTTGAAGGGTGAGTGACACCCTACCCCAACCCAACCAAACGCA
ACCCAACCCAACCCAACCCAACCCAACTCCAACCTTTTGAGTGTTTGATG
GCAGGCTGATTTTTTGTTGTTTGTGAGAGCTGTGACGTCGAAGAACAAAA
GGCAACGGAGGGACGACGACAAATCACTTGATTTAAAGTACCGATTTTCG
ACGAACCTTACGGTATTTAAGTAATATGGATTATAATATAACGAGCATCC
TCGAGATCCATCCTGTCGATAGGTGTGGAAAGAAAGGGGGTTCCTGCTAG
CCTTTGTGTCGCGGCACCCCCTGCAGTGGCTCGGAAGTGTGTGTGTGTGT
GTGTGTGTGTTTTTAATAGAAGAATCATTGCAGACTCTTTGAGTACGCTG
CCATATGTCGGAGGGTAGAAATGATATTTTAGTGTAAAAGACAACATCAA
CAACAACAACAACAGCAGCAACTCGTCGTAGCGCTTACCCCCCCCCCAAA
GCACATATCTCAAGCCCCATGTGACATAGAGAAGTTTTGGTACTCTCGAA
AATCGCGAGAAAACGATCGCCATCCTAGGAGATAGATGGTGGCCACCAAA
GACGAAACAGGAAGGGGATAAGATACGTAAAAGTTTTTTTTTGTAAGATA
TGGCAAAAATGTAGGGAGCACTGCCCAAATGTTAAGAGTGTCTCTCTATT
AGGAGTAGGAAAGGTGCTCCGTCTCGAAATAGATGCGTGGTCAATGGTCT
TGTGACTCAAGCCAAGCTTCAAATAAGTACGCCCCCCCCCCGCCCCCTGC
CGCCGCCCACGGTCGGCCCTGGTTGTTTGCTCTGTTTCCATCGCCCGTTC
GTCCTGCAGCACGGTGGCTGGCTGCCCTTGGCGGCGATGGAGAAGGTCGC
CAAGATCGTGGGACAGCACGAGATGAAGGTGTATGAGGTGGCGACGTTCT
ACACCATGTTCAACCGCGAGAAGAGGGGCAAGCATTTCATCCAGCTCTGC
GGCACGACCCCGTGCATGATGTGCGGGTCGGAGGAGATCAAGAAGACCAT
CATGGACGACCTTGGCATCAAGAACGGTGGTGAGTATCATTTGTCGTTTG
GGTGGCCGTTATAACGGGGTATATTAGTAGCAATAAAAGAAAAGAAAACA
ACACGTCAGTTTTAAACAGGGCAACATGCAGCAACGCGGGCATATCAAAA
CACGCCAAAACGACTCGTGTCGGTATTAAAACAGTTTCTGCGGATGTAAA
TTGTCTTTTTGAAGTGTCGCGAGGAATGTACGTTTCTGGTTTGTCTCTCC
TCCTAACAGTGGCGCTGTCGCCGTCCAGTAGCCTTCGCAGGAGAAATATG
AAGTAAAACATATAGGATTCACCATAGGTTTGGGGGAATATACTGTGGTC
AGTCTTTTGGTTAAATCCTGCGACTCCATTGGTCAACATGACGCCCACAT
CACGAGACTGTGAGGTTGGGGTTACTGTTAGGGTTAGTATTCTCCCAAAC
CAAGTGTCAACATGAAATCCACGATTCTTCCCAAAATGATTTATGTTGCA
TTGTATTCCCCCAAACCTATACTTAGTCCTATACTTCGAAGTATGTTTAC
TTAATCTAGCTGCGAAGGCAGTCCTCGCTATCTGTCATTCGCTGAGTTTC
TTGTGTTTGCGGTATCATGGTTACACGGTCGACAAAACCGCGCTCCTTTA
AGCGGCAATAAGGCCTACTTCCACTGTATCATCAAGTGTCACACGTATCA
CGCATTTTCCCCACCCACCATAAACCTTCAAAGATCCTTCATGCTCCAGT
ATTATTAATACGACAGTAATGATTACTCGTTGGTGAAAACATTCACTCTG
ATATGGTATCCATGTAAACGAACAACCTTGTCTACCACCAAGACTGAGTA
CGTTTATAGCTATAGCCGCCCAGGGGTGAAGGAAGTCTTACCTTGTACGG
CTGTACGTGAGAAAGAGTTGTTAGTTTTTCTGATGCCTGGTGCTGGGTTT
GCCGAATATCGGTGTGTGTGTGTGCTTAAAGGTGACAAGGGAGTGTTAGT
GTTGGCTAAGAATTTAACGAGCTCGTCAAACGGTACGGTATCACTTCCTG
CGCGAGTTGATAGGTAAAGTGGGGGGGGTTGGGTATATATCGGTGAAGCA
TCTCTGTACAGTACAGAGGACCAACATTATCACGGAGACTATTACAAGTA
CTGCTGTACGAGATGCGGCAGAGAGAGTTAAGAACCATCTCGATTTTATT
CTCGGCGTAGAGCTCTACCAGAAGAGTTCGTGATGGTATGATGATACATG
ATAGCAGTATTACGTGTTTTTTTTTTTTGTTTTTTCCGGTTTACTCTGTT
CGCTCTGATCTCTCTTCAGCTCCATCTCTCTGCGTGACTTGAATCTCGCA
TAGCAGGCACTCCTTTCCCCTCCCCATTGCGGTACGTGCCTGTATTTTTA
TCGCGAGAAGGATGCAGCGCTTTCTTCCCTCGTCGTCTCGCGTGGAAAGT
ACAGTAGTATGGCAGTTGTTCATGCTTATTGAGGCTTGTTATAATAGTTG
ATGCAGGGCTAGGGAGGGTGTTCCTTTGTGGCCTCTTTTTGGGCTCAGTA
GTGTAGCAATATATGGCAGCAGTATTGTGTTCTACAACAGGGTTAGATCA
GCACAAGTATTAAGCTCGCCCCTATAAAAACAGTGGAGGTGAGCGTGAGC
TTTTACTTTTTTTCACCCATCCGCCGGAGAAAAAAAAAAAGAAGAGGAAA
GTCACAGTAGTTTGTAGCGTGCTAGACGCAGAATGTTATGATGTTTAGGA
TAACGAGGAATGGACTTACTTAGGGTTGTGGGAACTGCTGCGACAACGGT
TCCTCGGATGATTGTTGTTGTGGTTGTTGTGGTGGTGGTGGAACCCGGTT
GCTGCACAGCACGAGGGCTTCGCACCGCCTGCTCACTCTACCTTTGCCCC
TAGCAATCGCCCACCTATTTCCTCTTCTTTTTGGGGCGTGATCATCCTCC
AAGCGCGCACCGCCAACCTTGGTGGTGCAGGTGCCGATGTTTCTCGCGGG
GAACCTGGCCGGATGGTTTTGCGCCTTGGTCACATACCGCACAAGCTGGT
ATGCGGGGCAGTCGTCGTCGTCCTACTCTAGGAACACCCTGAGCCTCATC
ATGTGTTATACCTTTGCCGTCCGCGCGAAGAGGGCCATGATGCTTGCCGT
GTCCATTCCGTCCTCCGCGAAGAGCCTTAGCAGCTTCTCCCAGTAGGTGT
GTGATGTCCTGGCTGCGAGGCCGTCCGGGATCATCGTCTCGTTGGTCTCC
CTTTATGGGGGTCAACGGCAGCGAAGACGATCGCGACATTCGCGCTCGGT
TGATGAATATCGCGATCGTTTTCGTCTCCGTTATCCCTCTTGAAGAGAGA
CCAACGGGACGATGACCCGGCATGGCCTCGGAGCGAGGACGTACCACACC
TTCAGGGAGAAGCTGTTAAAGGCTTTTCGCGGAGGACGGGATGGACGGAC
GCGGCGAGGCTCACGGTGTTCCCCGAATGGGGCGACGACTGCCCCGCTGT
CAAGGCGTCGGGTCGTTCTGCGCGTGAGTCGCGTACTGCACCAGCCTGGT
GGTGACGAACGCCAGCGTCCCCCCGAACGGAGATGCTGGCGTTCGTTTGT
ATCGGGCTGGTGCAGTACGCGACCCAGGCGCAGAAAGACTCGACGAGGTT
CCCGGTCGCGAACATGCTCTGCAGCTGCGCCCCGGTTGTTAGCGGCGCAA
GCGTAGAGGATGAAAGCGCCGAGAAAAAAACCAAGACCGGTACTCGCTTG
AGAATGCTAGGGGCAAAGGTGGAGTGAGCAGGGCGGCGGGGCGGATCTCT
CCTGGTGTACAGCAGTAGTCGTGTTGTATAAAAAACAACAATCACCCGAG
GAACCGTTCTAGCAACCTTTCGCAGAACTCAGAGTACATTCCTCGTATTA
CTGTGTAACATTCTCCGTCGTTGATACTTCTATATTGTAACTGGTTGTTT
GTTGCTACGTTGTTCCGAGAGACAAGCCAAAACGAACACCCTGCCTGGCG
CTGTGTGGCGCTGTACCAACTCAGGACTGATTATTAGTGTAGCTCGGTGG
AAGTGCTGTGCTTGTTAGCTAAACTAAATATATTTAACGGGCTCGAGACC
CAGCCAAACAAAAATCTGTTTTCTTTTTCTTTCAATACTGTACGAGTATT
ACTGTATACTCGTAGTCGTAATGGAAAATACTAGGATGAGAGAACAGCGT
TGGAGGGGGGAGTAGCTCTCCCCGAAGAGAAAGCGTCTGGCCTTGAGCCC
CATGAATGACATTTGTTAAGAAACACAGCAGTTCACTGTGCTACTGTTGG
TGGTCAGCGCTGACTATCGTATTTGTGAAGAAGCGCAGCGCTCCACTACT
GTGCTACTGTTTATAGTCAGCCCTGACTATCTAGTAGCACAACAGTAATG
GAGGTGCTGTGCTTCTTAACACAGTAACCGTCTACCACAGCAACAGTGCC
CCCTTGTCTTAGCACAGTAGTGATCATAGCCGTCGTTGTATTGCTGTACT
TATGCTTTGCTCGAGGGGACCAACAGTTTGTAAATCTCGCGTGGCTGAGG
ACCGCGCAACAGCTGAAAAACGCACAGACAGGAAGACACAGCATGCGCAC
AACAGGAGGGTCAGCATAGAAAAAAACGTACAGCCAGCTGCAGCCGTCGC
TGCGGCGGGTGCAAAAAACGTGCGAACGATACAACACGCCACCTTGACGA
TGCGTTTTGTTACTGTCTCCGCTGCCTTCAACCTGTGTACTCGGCCGTTC
TTGCCATGCTCATTCTATGCTCTGAGGACTTTGGCGAGGAGCGGAACGTG
CGCGCATGTCTGTGGCACGGGCTGGAATGCTTGCCCGAAACGAAAAAAAT
GACCATCCCCTGTTTGTCTTGTCCTTAACATAGCGGCACCGTGACAAATA
TATATTAGACTATATAATATTTCCTTTGCCATCCGACAATGTGTAGATTA
CTTTACCTTTTACCATCCTACCATCAATAAGGGCAAAGGAAAATCAATAC
TCATCTAAGTTTCAATTTCTTTTATGACATATGCTTGCCCATCAGTAGAC
TACGATATATTGTATGATGTGGTCACTCCGTCAGGTCAAATTTGTATTGG
TATTATTATAGCGTGGAACAAGCTCTAAGAAAGTGTTTTCACGTACCGCA
CACGTCTCTCTATGTCTTGGAATCGTCAGGCACAACGAAGGACGGCATGT
TCTCTCTCTTGGAGGTGGAGTGCCTCGGGGCTTGCGCGAACGCGCCGATG
GTGCAGGTGAGAGGGCGGGTGGGTAAGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGTACTCATTTGTTGCTTGCCTTTGTCATTTCACCGTTTGACCACG
CATCCCTTTCGAGACGGAGCACCCTTTCTACTCCTAATAGAGACGCCCCC
AACATTTGGGTGTCATATCTTGTCAAAGAAATCGTTTTGGCTTGTCTTAT
CCCGTTCCTGTTTCGCCCTTTTGTGGCCACCATTTATCTCCTAGGATAGC
GATCGTTTTCTCGCTATTATCTATTGTACCAAGCTTCTCCATGGGAAGGG
GGGGGATCAACCATTGTACCCACAGGAGGCGTGTTTTGCCTTTTGAACGT
TCTTTTGCCGTCTCGTCCCCCCTCCTTTTTTTTTATGGCATAGTTATACG
GTAATAGAAATACAATTTTTGCCTTCTTTTTTTTTTTTTTTTTGGCAGAT
CAACGACGACTACTTCGAGTGCCTCACCCCGAAGACGATGAAGCAATTGC
TGGACTTGTGCAAGAAGGGCGAGAAGCCGGAGATGGGTCGGTGGGGTAGC
CTGCCGCTCAACGGACAAGTCAGCTGCGAGGGTGAGAGAGAGAGAGAAAC
CCACGTGCACACGGTCTTATATTTTTATTTTTTGCTGGTTTGGTGGGGTT
CTCGCTCCACCAAGTGCCGCGTTGCTGTTTTTCTGGGTGGGTGCGTCACA
CACGGGTGGGGCGCACGTGAGCTCATGCTGCTTCTTGTCGTGGACCTTTT
TCGTAGAACTGTCTGCATGAGAGCGCGTGCGTCAGTTGGTTCAAAAATGT
CATGAATTGCGGAAACATGCGGGCTCGCCAGTTCTGACGATGGTCGCGAG
CATTGTACAGACGGAGTTATACTTTGGGGAGCCATTTCAATGCGCCCTGC
CACTCTGATAGAAATTATAAGCCCCGTTTGAACTCTATATTATAGACCTA
TACGAGGTATAGGATGATCCCAAATGGATGTCGACCAGGATTCGACGTCT
ATATGACCGGGATTTTCGATCTCTGCTCCCTCAAAGCCCGGCACAACCAT
TGTTGGTTTTGTTGTCCGCAACTGCACAACAAATAAAAAACAAAAGCCGA
AAGCAGCCGAAAGATTTATTGGTTGCTTCGTTTTTTGTTGTTTTTGGAAG
AAAACGACGTCACACCGCTGATTATTTGTAAATAAATAGTGAAGCCGTCG
CTTCGTTTTTTGTTTGCTGCGTTTTTGGTTTTATTTGTTGCTTCAACACA
ATTAAATACTGATACTATCACATGATACATGATACCTGATACTATCAATA
GATCTTCTACTAACTACTGCTGTTACTACTACCACTACCACTACAGTATA
TATTACTGTCCTGTGCTACTGTGATACTACTATTATACTACTACTGTACT
GTACTGTTGTACTTTTTAACGTACAGTAGTATCTGTATCTATCTGTCACT
CTACTACCTCTGTTGTTGTTGATGCTGTGTGCTGTACTACTCCTACTGTT
GTTGTTCGAGCGCGCTCTTTGTTTGATGTCTGCGTTGCAAACAAACTACC
AGAAGCTTTTTAGTAATTATGTTTTTTACTAGAATCGCTCCATTATTTGC
TGTTGTCACAGTCCACGAGAGAGCGCCCGACGGCACAGCATTTTCCGATT
TCCCCATCGGCCACTCCGAAACATTTGCCCATATTTCTCATTGGTTCCGC
CTGGACATTTACATCTCCGATACGAGTATGATACCTATAATGAACCTTTG
AGAGCTCTGTTGCCCACATGGACACCCACCGTCAGTCGCAGAAACCTTGT
ATTTTTATAGATGATTGGTGTCAACCCCTTTCACAATAATGGCGCCTATA
AACTACCCTTTTCACAATACCCTGTCTAGCCTGGGAGTGTGTCAGTCACA
GCCGACGATGTTTTTTGCAATTTAAAGGGGAGTGACGCTATCTATATGGT
CTATGTGATTGTAGGTTGTCGTCAACCATTGTAGGAAGTTCGGGGTTCGA
TTCCCAGTGAAAAAAAAATGACACTTTTATGGGCGACCTTCCGTCGCGGA
AAGCGCGAGAAGAGCGTAAGTAAGCACAATTCAGTGACATTCGACGAGAG
AAGAAAGTGCTGCACCCTTTTCTCGATAAATATACCTGGTAGGCACGTAC
CGTAGTGGGGAGGGGGAAGGAGCGTCTGCTACATGACCCCGGGTCTGAGT
TACGAACAGAGATACGGAGCTGGAGAAGGAATAGGGCGAAGATAATGAAT
GGGATGGGGAAAAAAACTGTCCGTGTCGAACGTGGACCACCCCGAGTGTT
AAGGTCATTGGATACACGTGGGCATATATACCAGGTAGTATACATGCCCC
CTTGTATTATTATTTTTGCTTACAAAGAAATCAGCCGTGACGTTCCAAAC
TGGTTCGGAGGCCAGGGGATAATCGCCATTATATTATACGAGTTTCGCCT
ACCATTTTGGGGATGTCGTCAGCATGTCTCCTATATGGGCGCTTGGGTTT
CGTCTCGCCTCTAATAATATTGAAAACACGTTTTACCTACGGGCACACGT
ATTTTTCCTTACTCTTTTAGCACGATCTTCCTGCCCTAACTGACATTTTG
CCTTGAGGGTTTTCCTTCACACCCTTGGCATGCGCCCTTAAATCCTGCGA
GCCTGTCGGGCAGTATTATAGGCGTTTCTACCTAGTCTTATCTACTAAGC
GCAGCTAGCCAATGTTCCACGGCATCCGATAGCAGTACTTGTACAGCAGC
AGCAGAACCATCATACGTTATTTCGTTTTTTTTTTTGGGTGTTTTCATAT
GATAGTGGTGGGCCAACAGCCACTAGTCACGACGTTTGCCCACTTTTTTT
TTGCCAGCGCAGGCGCTCTGCCGGTCACAATAGCCAGCCCTCTCTGCTTA
TGCATCCACCCCTCCTTTATAGTGTGCAACAACGCGTGTTGTCTTCATGG
TCGTCTATAGCTGTTGATGAAGCTGTGCAATACGTATTATTCATTTCCGA
TGTATCGTGCCAGATTTCTTTCCTACGTGGTGAGTGTCCCCAACAACTGT
CTCTCTCAACGGCCCCGCTCTCCACACGCCACGCCATCTATCTGTATCTG
CTCTCCTGCTTCGGGTCAGTGTAAAACAAACGTACTGGACAATGATGAGT
AGGAGGTATAGGAGCCGATTACTACTGCTGTTGTAGAGCGTGCAAAAAAC
GGTAGAATACACGAACTCTGGCTCTTGTGGTGGACCATTCTCTTTTTTTT
AGCGTATCTTGGGGCAGAAACAAGAGAAAACACCCGAATCTCCGCGGCTC
TTCTCGGCGGGCATCTCGATGCCACCACGATGCCGCCTGTCTGTGTCCAT
ACGCGATATTGGAACACTCGCTATTAGTATGAAATCGGGATATGGTGCCC
TGTGAGCCATTTGGGACAGTCGTATACTTCAAAGTATAGGTGTAAACTCG
TACTGCTATTTACAACTTTATTTATTTTTTCCCGGGCGAGCGCGTATCGT
CCCTCAGGTATGCGGACTGTAATATTCCCGCCGGATGCTTTTTGTTGTTG
TTGTTGTTGCTATGAAGGTATGATGTCGTCTCCCTCGGATGTGAACACTA
TTTTCTTATCGTTGTTTTTGTAAAAAAACTTATGAAAAGTATCCTCCAGC
GTGTTTAATCTTTTTGCATACGTGCACGATTTACACTCATAATATTGTGT
ATGTATCTGACCTGTTTTGATATTTTATCGGTTCCAAGAGTTAGCTTTTT
TGCGTGAGATTTGCGTCGCTGTTTTTTTTTTTTCTTCACTGCTGCACTGC
TCGTCGTTTCTCGCATACTTGATGCCTGTCCGTGCGCAATGTCTGGCTTT
CTTGTTTTGCTACGGGGACGCACACACACACGTGCGCGCACGAATCGGGT
TATTATCAGCACACGCCTCGTTCTTGGCGCTTATTTTTATTTACTCTATT
TCTCGTTCTTGACAACGCACGTGGAAATCAAAATGCGCTATATGATGTGT
GTACCCTGGCAGGGTAAGAGTAGAGGGCAGAGGAGGAGCTAGCTTTTGCT
GTGTCTCCCATCCCGTTTTCTTTTGAAGGTGCGCTTGACTGGCGCCCACC
AAAACTTTATGGTCCGTTTGTACACTGCACTGTTCGTTTCGGGGTTTCTT
AGGTAACATTTTTTTCTTGTGTGTGTTTTGGCGGCGCAGGCCCGAACGGC
AAGACGTCTCTCAGCGGAGAACCGACGGGACCGGGGTTCATGATGCGGAA
GGACCTCGAGAAAAAGGTCGACCCGGCTTCGGTGAAGGAGCACATGTGCT
ACTGATGAGGGGCTATCATTACGATGGTGTTATCGTAGAAGCACCGTCGC
CGTGGCTGCTGGGGAGCATATAGTCTATTGTTATGTTATCGATCGCGATC
GAGAAGAGGAACGCCGTGTTTTTTTCTTGACTGCATACAGAATGTTG
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig105:370563..383759+

>mRNA_D-herbacea_F_contig105.541.1 ID=mRNA_D-herbacea_F_contig105.541.1|Name=mRNA_D-herbacea_F_contig105.541.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1692bp|location=Sequence derived from alignment at D-herbacea_F_contig105:370563..383759+ (Desmarestia herbacea DmunF female)
ATGGCGTTGCGCACGATAGGAGCGGCGGCACGGGGCCTGTCTTCGAGAAG
AACATGCCCTTCTCGGTCTATGCCGTTGGTGGTGAACGCTAGTGCTGTGA
GAAAACTCCACAACACCGCTTCTGCGTGCGACGAAGTGCACCCATTGGGA
CAGATGGCGTTGCGCACGATAGGAGCGGCGGCACGGGGCCTGTCTTCGAG
AAGAACATGCCCTTCTCGGTCTATGCCGTTGGTGGTGAACGCTAGTGCTG
TGAGAAAACTCCACAACACCGCTTCTGCGTGCGACGAAGTGCACCCATTG
GGACAGCACCGCGACACCCCCGACAACAACGAGGCGACGTTCTTCGACTT
TACCGACGAAAACTACGCCCGAGTGGAGAAGATCATGGCTAAGTACCCCG
CGAACTACCGCCAAGCTTCCATCATTCCCCTCCTAGACCTGGCGCAGAGG
CAGCACCGCGACACCCCCGACAACAACGAGGCGACGTTCTTCGACTTTAC
CGACGAAAACTACGCCCGAGTGGAGAAGATCATGGCTAAGTACCCCGCGA
ACTACCGCCAAGCTTCCATCATTCCCCTCCTAGACCTGGCGCAGAGGCAG
CACGGTGGCTGGCTGCCCTTGGCGGCGATGGAGAAGGTCGCCAAGATCGT
GGGACAGCACGAGATGAAGGTGTATGAGGTGGCGACGTTCTACACCATGT
TCAACCGCGAGAAGAGGGGCAAGCATTTCATCCAGCTCTGCGGCACGACC
CCGTGCATGATGTGCGGGTCGGAGGAGATCAAGAAGACCATCATGGACGA
CCTTGGCATCAAGAACGGTGCACGGTGGCTGGCTGCCCTTGGCGGCGATG
GAGAAGGTCGCCAAGATCGTGGGACAGCACGAGATGAAGGTGTATGAGGT
GGCGACGTTCTACACCATGTTCAACCGCGAGAAGAGGGGCAAGCATTTCA
TCCAGCTCTGCGGCACGACCCCGTGCATGATGTGCGGGTCGGAGGAGATC
AAGAAGACCATCATGGACGACCTTGGCATCAAGAACGGTGGCACAACGAA
GGACGGCATGTTCTCTCTCTTGGAGGTGGAGTGCCTCGGGGCTTGCGCGA
ACGCGCCGATGGTGCAGGCACAACGAAGGACGGCATGTTCTCTCTCTTGG
AGGTGGAGTGCCTCGGGGCTTGCGCGAACGCGCCGATGGTGCAGATCAAC
GACGACTACTTCGAGTGCCTCACCCCGAAGACGATGAAGCAATTGCTGGA
CTTGTGCAAGAAGGGCGAGAAGCCGGAGATGGGTCGGTGGGGTAGCCTGC
CGCTCAACGGACAAGTCAGCTGCGAGGATCAACGACGACTACTTCGAGTG
CCTCACCCCGAAGACGATGAAGCAATTGCTGGACTTGTGCAAGAAGGGCG
AGAAGCCGGAGATGGGTCGGTGGGGTAGCCTGCCGCTCAACGGACAAGTC
AGCTGCGAGGGCCCGAACGGCAAGACGTCTCTCAGCGGAGAACCGACGGG
ACCGGGGTTCATGATGCGGAAGGACCTCGAGAAAAAGGTCGACCCGGCTT
CGGTGAAGGAGCACATGTGCTACTGAGCCCGAACGGCAAGACGTCTCTCA
GCGGAGAACCGACGGGACCGGGGTTCATGATGCGGAAGGACCTCGAGAAA
AAGGTCGACCCGGCTTCGGTGAAGGAGCACATGTGCTACTGA
back to top