mRNA_D-herbacea_F_contig1044.508.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: D7FWK7_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK7_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 3.570e-12 Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 3
Query: 39 MLFFIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGY-VGKMADFGHCRAFGE-EVVMGNPGFVAPEVLSNASTKAHPTMDVFSMAATFYRCCVKQDIAQFNMSLHEGLLTPIEKGRLAELEELAKSANVNQERLNFEIGATSRTLADGSFERTMLRPEKLNDAGLSPSCKDDLCARLPAYMANDPSRRPDM-------DSLCDFLLEI 653
++ ++ A GL HL G+SHNDVKPGN+LV F+ + G V K+ D G A G+ G G PE + + P+ DVF++A K + NM + + T +K ++++E ++A+V + +F T R D +L PE L D GL+ K+ + L ++ DP++RP M D + + LLEI
Sbjct: 546 LMRLLSDMARGLEHLGRH-GVSHNDVKPGNMLV-FQ--DSGVLVAKVTDLGCALAHGDMRRGQGTIGGQVPEGMMSREVACEPSQDVFALAHMVLLTLTKNEWKSSNMWFSQAVQTDGDKEIISKME--GRNASVASKH-HFMDEVTLRNQIDPRARAALLNPEHLYD-GLTDGVKEKVIILLAKALSPDPTKRPPMAEMLAELDDMNECLLEI 751
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: D7FWL9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL9_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 4.820e-12 Identity = 66/214 (30.84%), Postives = 102/214 (47.66%), Query Frame = 3
Query: 39 MLFFIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGY-VGKMADFGHCRAFGE-EVVMGNPGFVAPEVLSNASTKAHPTMDVFSMAATFYRCCVKQDIAQFNMSLHEGLLTPIEKGRLAELEELAKSANVNQERLNFEIGATSRTLADGSFERTMLRPEKLNDAGLSPSCKDDLCARLPAYMANDPSRRPDM-------DSLCDFLLEI 653
++ ++ A GL HL G+SHNDVKPGN+LV F+ + G V K+ D G A G+ G G PE + + P+ DVF++A K + NM + + T +K + +E A++A+V + +F T R D +L PE L D GL+ K+ + L ++ DP++RP M D + + LLEI
Sbjct: 551 LMRLLSDMARGLEHLGRH-GVSHNDVKPGNMLV-FQ--DSGVLVAKVTDLGCALAHGDMRRGQGTIGGQVPEGMMSREVACEPSQDVFALAHMVLLTLTKDEWKSSNMWFSQAVQTDGDKEIASTME--ARNASVASKH-HFMDEVTLRNQIDPRARAALLNPEHLYD-GLTDGVKEKVVILLAKALSPDPTKRPPMAEMLAELDDMNECLLEI 756
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: D7FZ99_ECTSI (Kinase, CAMK CAMKL n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ99_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 6.060e-12 Identity = 59/232 (25.43%), Postives = 104/232 (44.83%), Query Frame = 3
Query: 21 MWPLSSMLFFIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGYVGKMADFGHCRAFGEEVVMGNPGFVAPEVLS-------NASTKAHPTMDVFSMAATFYRCCVKQDIAQFNMSL---------HEGLLTPIEKGRLAELEELAKSANVNQER--------LNFEIGATSRTLADGSFERTMLRPEKLNDAGLSPSCKDDLCARLPAYMANDPSRRPDMDSLCDFL 644
M + + +AGAA GL +LH+ELG++H DVKP N L++ +G V K+ADFG + GE + + + APE ++ P++D FS+ + ++ ++F+ H + ++ + + A +++ER L+ + ++ G RT+L P K N +G ++ A L AN P RRP +D++ L
Sbjct: 523 MMSFADRMMMMAGAARGLDYLHSELGLTHGDVKPENCLLT-----KGLVIKLADFGLSGSSGEPICGLSKQYAAPEAVAVFLRREIPQRAMLQPSLDTFSLGVMMLQVLFVEEGSRFSGKALATHGFTPKHPSFHSAVQNAAYLKQKFEATGTGIDKERFEDASTVVLDLHVNYAAQPAKMGDLRRTILNPSKWNQSGELLFQEEVTQAFLSLLNAN-PLRRPSLDTVSRLL 748
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: A0A6H5LJC5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJC5_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 4.010e-10 Identity = 63/206 (30.58%), Postives = 97/206 (47.09%), Query Frame = 3
Query: 63 AHGLRHLHTELGISHNDVKPGNILVSFEGPEEGY-VGKMADFGHCRAFGE-EVVMGNPGFVAPEVLSNASTKAHPTMDVFSMAATFYRCCVKQDIAQFNMSLHEGLLTPIEKGRLAELEELAKSANVNQERLNFEIGATSRTLADGSFERTMLRPEKLNDAGLSPSCKDDLCARLPAYMANDPSRRPDM-------DSLCDFLLEI 653
A GL HL G+SHNDVKP N+LV F+ + G V K+ D G A G+ G G PE + + P+ DVF++A K + NM + + T +K ++++E A++A+V + F T R D +L P+ L D L+ K+ + L ++ DP++RP M D + + LLEI
Sbjct: 2 ARGLEHLGRH-GVSHNDVKPRNMLV-FQ--DSGVLVAKVTDLGCALAHGDMRRGQGTIGGQVPEGMMSREVACEPSQDVFALAHMILLTLTKNEWKSSNMWFSKAVQTDGDKEIISKME--ARNASVASKH-RFMDEVTLRNQIDPRARAALLNPDHLYDV-LTDDVKEKVIILLAKALSPDPTKRPPMAEMLAELDDMNECLLEI 199
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: D7G6N6_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N6_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 9.020e-10 Identity = 49/198 (24.75%), Postives = 89/198 (44.95%), Query Frame = 3
Query: 21 MWPLSSMLFFIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGYVGKMADFGHCRAFGEEVVMGNPGFVAPEVLS-------NASTKAHPTMDVFSMAATFYRCCVKQDIAQFNMSL---------HEGLLTPIEKGRLAELEELAKSANVNQER--------LNFEIGATSRTLADGSFERTMLRPEKLNDAG 542
M + + +AGAA GL +LH+ELG++H DVKP N L++ +G V K+ADFG + GE + + + APE ++ P++D FS+ + ++ ++F+ H + ++ + + A +++ER L+ + ++ G RT+L P K N +G
Sbjct: 325 MMSFADRMMMMAGAARGLDYLHSELGLTHGDVKPENCLLT-----KGLVIKLADFGLSGSSGEPICGLSKQYAAPEAVAVFLRREIPQRAMLQPSLDTFSLGVMMLQVLFVEEGSRFSGKALATHGFTPKHPSFHSAVQNAAYLKQKFEATGTGIDKERFEDASTVVLDLHVNYAAQPAKMGDLRRTILNPSKWNQSG 517
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: A0A7Y1Y4W2_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Akkermansiaceae bacterium TaxID=2562705 RepID=A0A7Y1Y4W2_9BACT) HSP 1 Score: 67.4 bits (163), Expect = 2.580e-9 Identity = 42/96 (43.75%), Postives = 55/96 (57.29%), Query Frame = 3
Query: 42 LFFIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGYVGKMADFGHCRAFGEE---VVMGNPGFVAPEVLSNASTKAHPTMDVFSMAATFYR 320
L + G A GL H H E GI H D+KP NIL+S + V K+ DFG A + +VMG PGFVAPEVL++ A P DVF++ A ++
Sbjct: 127 LEIVQGIASGLGHAH-EAGIVHRDIKPANILISTD-----LVPKLGDFGLAVASDDVASGMVMGTPGFVAPEVLNDPEA-ASPASDVFALGALLHQ 215
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: A0A368T0D9_9ACTN (Non-specific serine/threonine protein kinase n=2 Tax=Marinitenerispora sediminis TaxID=1931232 RepID=A0A368T0D9_9ACTN) HSP 1 Score: 66.6 bits (161), Expect = 4.610e-9 Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 3
Query: 33 SSMLFFIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGYVGKMADFGHCRAFG----EEVVMGNPGFVAPEVLSNASTKAHPTMDVFS 299
+++L F AG A L +H G+ H D+KPGN+++S EGP ++ DFG RA G E V G PG++APE L A+ A P DVF+
Sbjct: 129 AALLSFAAGTAEALAAIHAA-GVLHRDIKPGNVMLSAEGP------RVLDFGIARAAGDDEAEHAVYGTPGWIAPERLDGAA--ATPRSDVFA 212
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: A0A7Z0TJJ7_9ACTN (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Streptomyces sp. UH6 TaxID=2748379 RepID=A0A7Z0TJJ7_9ACTN) HSP 1 Score: 65.5 bits (158), Expect = 5.680e-9 Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query: 54 AGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGYVGKMADFGHCRAF--------GEEVVMGNPGFVAPEVLSNASTKAHPTMDVFSMA-ATFYRCC 326
AG A L+ +H E G+ H DVKPGN+L+S EGP ++ DFG RA G V+G+P F+APE +S+ S P DVFS+A A Y C
Sbjct: 132 AGLAEALQAVHAE-GLVHRDVKPGNVLLSAEGP------RVIDFGISRALNSAATRITGTGTVIGSPAFMAPEQISS-SHDTGPEADVFSLAGALVYAAC 223
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: UPI001F1A2D4E (serine/threonine protein kinase n=1 Tax=Spiractinospora alimapuensis TaxID=2820884 RepID=UPI001F1A2D4E) HSP 1 Score: 65.9 bits (159), Expect = 7.820e-9 Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 3
Query: 39 MLFFIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGYVGKMADFGHCRAFG----EEVVMGNPGFVAPEVLSNASTKAHPTMDVFSMAA 308
++ F AG A + LH G+ H D+KPGN+++S GP K+ DFG R+ EEV+ G PG++APE L A ++ P DVF+ AA
Sbjct: 123 LVLFAAGTAEAIAALHAR-GVIHQDIKPGNVILSPNGP------KVLDFGIARSVHDTGREEVIAGTPGYLAPERLDGA--RSTPAADVFAWAA 207
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Match: A0A1V3BZY8_9ACTN (Non-specific serine/threonine protein kinase n=3 Tax=Nocardiopsis TaxID=2013 RepID=A0A1V3BZY8_9ACTN) HSP 1 Score: 64.7 bits (156), Expect = 2.030e-8 Identity = 57/179 (31.84%), Postives = 76/179 (42.46%), Query Frame = 3
Query: 48 FIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEGYVGKMADFGHCRAFGEEVVMGNPGFVAPEVLSNASTKAHPTMDVFSMAATFYRCCVKQDIAQFNMSLHEGLLTPIEKGRLAELEELAKSANVNQERLNFEIGATSRTLADGSFERTMLRPEKLNDAGLSPSCKDDLCARLP 584
F AG A GL LH GI+H DVKPGN+++S +GP+ G G RA G PG+VAPE + AS A P DVF+ A +D P G EL + + + E + ++ RTL +G+ D G PS D + A LP
Sbjct: 135 FAAGTAEGLAALHAA-GIAHRDVKPGNVILSPDGPKIVDFGIATTIGARRATDRGASYGTPGWVAPERYAGAS--AAPAADVFAWGALVALAATGRD--------------PFGHGTPEELRRRVSAGDHDVEGVPEDL----RTLVEGALS---------TDPGRRPSAVDLMRALLP 283 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1044.508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1044.508.1 >prot_D-herbacea_F_contig1044.508.1 ID=prot_D-herbacea_F_contig1044.508.1|Name=mRNA_D-herbacea_F_contig1044.508.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=229bp MCTSMWPLSSMLFFIAGAAHGLRHLHTELGISHNDVKPGNILVSFEGPEEback to top mRNA from alignment at D-herbacea_F_contig1044:4962..9419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1044.508.1 ID=mRNA_D-herbacea_F_contig1044.508.1|Name=mRNA_D-herbacea_F_contig1044.508.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=4458bp|location=Sequence derived from alignment at D-herbacea_F_contig1044:4962..9419+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1044:4962..9419+ >mRNA_D-herbacea_F_contig1044.508.1 ID=mRNA_D-herbacea_F_contig1044.508.1|Name=mRNA_D-herbacea_F_contig1044.508.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1374bp|location=Sequence derived from alignment at D-herbacea_F_contig1044:4962..9419+ (Desmarestia herbacea DmunF female)back to top |