mRNA_D-herbacea_F_contig104.460.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig104.460.1
Unique NamemRNA_D-herbacea_F_contig104.460.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig104.460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig104contigD-herbacea_F_contig104:246095..249985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2069
Cds size2067
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927447.789549-CDS-D-herbacea_F_contig104:246094..2464331622927447.789549-CDS-D-herbacea_F_contig104:246094..246433Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 246095..246433 +
1690790176.4567444-CDS-D-herbacea_F_contig104:246094..2464331690790176.4567444-CDS-D-herbacea_F_contig104:246094..246433Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 246095..246433 +
1622927447.807324-CDS-D-herbacea_F_contig104:248257..2499851622927447.807324-CDS-D-herbacea_F_contig104:248257..249985Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 248258..249985 +
1690790176.474251-CDS-D-herbacea_F_contig104:248257..2499851690790176.474251-CDS-D-herbacea_F_contig104:248257..249985Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 248258..249985 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig104.460.1prot_D-herbacea_F_contig104.460.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig104 246095..249985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig104.460.1

>prot_D-herbacea_F_contig104.460.1 ID=prot_D-herbacea_F_contig104.460.1|Name=mRNA_D-herbacea_F_contig104.460.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=689bp
DGSVAELNVTTTPEEDAARRAADKKKAERRAAYRASKISSPKDKEAKKKA
KGVAAAATTATAGGSGDGGGSRKRSEERSEQRPCYLRITMRDQLPPGWET
TVRERAENDVDARGQGAFWYSFSKGGNTVRFRSLKDVENFVNSDHPDAAQ
HRNAARKRKYGGTALSPSPTATGRGPSTSLSPSSSHKAFSATGSLLPPGD
KGTDADKKKLPGKLKKKRKKMQIPGVQKFTKDGVRVYSKGGTSYVKIGDR
LQEGVALPHVEKGGKKGVARGGGGGGDGVSETGPYVKKKYTKKPGPKGAN
VGKEDGQERQKETSNTNKPKLKKKAAAVATETEGVKKHGKLPELKKHNTK
PGISKEILDCLPPGSGDDLDVIPAQFKKRKQKGEGTGAEGEPKKRRKKKL
KVAPAHTDPGAESVARLPPSSPPATALSPNASVLSDGGVSGEERKKKRGR
PLGSKNKKCKGDSVGGDGDGDDSSKSGQRPNKRPNTTSPKGRGGGAAGKE
KSVVKKVRSVEDSSVRRRESGAGLVLSTSEGKVMRAEGSGEGGKVISGVT
LSEALRKSCSEAIKRARGVVGAAVSMDSSPQTGDKAVEKKDEGQEVLKAT
GKDWSSPEKDKETPEEDKKETPEEENKKKTPGEGKKKKLLSAPQRRHSAG
DVSKGKKGVSGERDPVRNRKGGRPSLPAPSLKNVSGGSK
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mRNA from alignment at D-herbacea_F_contig104:246095..249985+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig104.460.1 ID=mRNA_D-herbacea_F_contig104.460.1|Name=mRNA_D-herbacea_F_contig104.460.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3891bp|location=Sequence derived from alignment at D-herbacea_F_contig104:246095..249985+ (Desmarestia herbacea DmunF female)
GACGGTTCCGTCGCCGAGCTTAACGTGACCACGACCCCGGAGGAGGATGC
CGCTCGCCGGGCTGCGGATAAGAAAAAGGCCGAGAGGAGAGCGGCGTATA
GGGCCTCCAAGATCTCGTCGCCAAAGGACAAGGAAGCCAAGAAGAAGGCC
AAGGGGGTGGCCGCCGCCGCGACGACTGCGACTGCGGGTGGGAGTGGCGA
CGGTGGTGGATCTAGGAAACGTTCAGAAGAACGGTCCGAGCAAAGGCCGT
GTTACTTGCGGATTACCATGAGGGACCAACTCCCGCCCGGGTGGGAGACA
ACCGTGCGCGAGCGCGCTGAGAATGATGTGGATGCGAGGGTGAGTTGTTC
CCTCTCGGCGTAGTAACGAGAAGGGTGTCGTCCAGGGGGGGGGGGGGGGG
GGTACTCATTTGTTGCTGGCCTTATTCATTTGACCATTGACCACGCATCC
CTTTCGAGACGGGCACCGTTCCTACTCCTAGTGGATGTCTCCAACATTTG
GGCGCTCTTTACGCTTTTGCCGTATCTTACATACAAAATTTTTAGCTTAT
ATCTTATCCCCTTCCTGATTCGCCATTTGTGACCACCGTCTATCTCCTCG
GATAGCGATGGTTTTCTCGCGACTGTCTGGTGTACTGAAGTTATCCATGT
CACATTTGTCTATTTTCTTCATCCCCTCCTCCAACACGCCTCATTGTATA
GTACACACATTCTCCCACTATGTGAGTTCTACTCCCGTCGGGCTTCCCTC
AAGGGCACATATCTATGTATCTTCTTCCTCCTGCTTCCGAACACTGGTAT
ACCTCTTTCTTCTTTCTGGCAAGGCCAGATCTCGTATACGAAATTGCAGT
TGTAGAGTTTTCGCGTAGTCCATTGGCCCGTGTAAATACGTTTTCATACC
TATCTCTTCTCTTAACCTCGATATGCCGTTCCTCATTGTTTAGGGGGAGT
GGGTGGGAGGAGTACTCGTGACAGCGTATGCCATAGTCGTCTACGTATCA
AACATTGTCCTTGCTTCCCAACAATGCAGGAACAGAGCCATATGCTGAGT
TTTGGCCAGCGGCCAGGCTTCGTTTCACAAAGGATGATGCCAGCTGCTGG
CCGTGATGACCCTTTTGCCTTTTTGCTACGAACGCCAGACCGATTTTTTC
ATGTGTTTCGTTGGATATCACCCTGAATACCCAAGTCATACCACGTTTAG
CGGGGCGTGACTATTGTGCCATACGCCGAGGACCTCGAGGGGCTTAGATC
TCGTTGCGCGCATAATATGACAGCGCTCACCGGTGTGTAATCCAATACTG
CTGTCGATCTGCGGTTCAACGTCGCGGGATTATTCCTAGAATTTTCCCCT
CTGCGGTTGGAGCGGCGGCGGTGTCACTGCACCGCCATGCTCGACAAACA
CCATGCCGTGACTCGCTTGTACCTCGAAATACGAGGCAGTCGAAGCTGCA
AGTTGAACAGCCTCGTAGCGCTGTGCTGTAGCTGTCGGGTTCTAAGTAAC
TGTCGAGTCTTGACGTACGTATGATAACCCATGTTTGTATGTGTAACACC
CCTGCCCATTACGAGCAAGTTGTCCACGTTTTCCAATAGCAACGCAACAC
AATATGTATTAGAGGAGGGGCAGGAGTCCGATGCGTGTATATACGTACGC
TGTGCTGGTGAAACTTTTTTTTTTTTTTTTTTTCGTCCCATTTATTATCT
TCGCCCGAGTCTTACTCTAGCTCCATCTCTCTTCGTAACTCAGATCCGGG
GTCACATAGTAGGCGCTCCTCCCTCCTTCCCACTATGGTACGTGCCTACA
ATTTTATCGCGAGAAGAGTGCAGCACTTTCTTCCCTCGTTGACTTTCATC
GAATTGTGCTTACTCACGCTCTTCTTGCGTTTTCCGCGACGGAAAATGAC
ACAGAAAACTGCCACCGGGAATCGAACCCCCAACTTCTGCCAACAGAGGA
AATACCCTAGCCATTAGACCACTGGGCCACCCCCACAAAACTGCATATGT
AAAATCCGTTTTTGTCTTTTTCATTGTGGCGTGGTTCATACACAGGAGAC
AGCTACATGGCCCCGGAGTCTAGCCGCTGCTTCTTATCCCCCCCCGCACT
CCCGAAGCCCCCAACGGCAAGCTTATTATTTTCTCCCCGCGTTTGCGCGT
TTGACTCATCTAGGGACAAGGAGCTTTTTGGTACTCTTTCTCGAAAGGCG
GAAACACCGTACGATTCAGATCCCTCAAGGACGTGGAGAATTTCGTGAAC
TCGGACCATCCAGACGCCGCGCAGCATCGAAATGCGGCACGAAAGAGAAA
ATACGGAGGTACAGCACTGTCGCCGTCACCAACAGCAACGGGCAGAGGAC
CATCAACATCGCTGTCGCCATCGTCGTCGCACAAAGCTTTTTCGGCGACG
GGCTCCTTATTGCCTCCTGGAGACAAGGGTACGGACGCAGACAAAAAGAA
GTTGCCGGGCAAGCTCAAGAAAAAGCGGAAAAAAATGCAGATCCCCGGCG
TGCAGAAGTTCACGAAGGACGGGGTAAGGGTTTATTCCAAAGGAGGGACG
TCGTACGTGAAGATAGGGGACAGGCTGCAGGAGGGTGTGGCGCTGCCTCA
TGTCGAAAAGGGAGGGAAGAAGGGTGTTGCCCGTGGTGGTGGTGGTGGTG
GTGATGGCGTGTCGGAGACGGGTCCTTACGTGAAGAAGAAGTATACCAAG
AAGCCCGGGCCGAAGGGAGCAAACGTTGGGAAGGAGGATGGCCAGGAACG
GCAGAAGGAGACATCGAACACCAACAAACCCAAGCTGAAAAAGAAGGCGG
CCGCCGTCGCGACGGAGACCGAGGGCGTGAAGAAGCACGGCAAGCTACCA
GAGCTAAAAAAACACAACACCAAGCCTGGAATATCGAAGGAAATACTAGA
CTGCCTGCCCCCCGGGAGCGGAGACGACTTGGACGTGATCCCGGCGCAAT
TCAAGAAGCGGAAGCAGAAAGGGGAGGGGACGGGGGCGGAGGGGGAACCC
AAGAAGCGCCGGAAGAAAAAGTTGAAAGTGGCGCCCGCACACACTGACCC
TGGCGCGGAATCGGTGGCGAGGTTGCCGCCATCATCCCCTCCCGCGACGG
CGTTATCGCCAAATGCCTCCGTTTTATCGGACGGCGGTGTGTCGGGAGAG
GAGCGTAAGAAAAAGCGAGGACGCCCTCTAGGCTCGAAAAACAAGAAATG
CAAGGGGGATAGCGTCGGCGGTGACGGTGATGGCGACGACTCCTCAAAAT
CTGGACAGAGGCCTAACAAACGTCCCAACACTACGTCTCCCAAAGGCCGA
GGGGGGGGGGCTGCCGGGAAGGAAAAGAGCGTCGTTAAGAAGGTCCGGAG
CGTGGAGGACAGCAGTGTTCGGAGGCGGGAATCTGGGGCGGGGTTGGTGC
TGTCGACCAGCGAGGGTAAGGTGATGCGTGCGGAAGGTAGCGGGGAAGGT
GGAAAGGTGATCAGCGGCGTGACCCTCAGTGAGGCCCTCCGAAAGTCGTG
TTCAGAAGCGATTAAGAGGGCCCGTGGCGTGGTGGGCGCGGCTGTGTCGA
TGGACTCGTCTCCTCAGACGGGTGACAAGGCGGTAGAGAAGAAGGACGAG
GGTCAGGAGGTCTTAAAGGCGACTGGGAAGGATTGGTCTTCGCCAGAGAA
GGACAAGGAGACGCCAGAGGAGGACAAGAAGGAGACACCAGAGGAGGAAA
ATAAGAAGAAGACGCCAGGGGAGGGAAAGAAGAAGAAACTGTTGTCGGCA
CCGCAGCGCCGACACTCTGCTGGAGACGTGAGCAAAGGCAAGAAAGGTGT
CAGTGGTGAGCGGGATCCGGTTCGAAACCGCAAGGGGGGGAGACCGTCTC
TGCCGGCTCCATCTCTCAAGAACGTATCCGGCGGCAGCAAG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig104:246095..249985+

>mRNA_D-herbacea_F_contig104.460.1 ID=mRNA_D-herbacea_F_contig104.460.1|Name=mRNA_D-herbacea_F_contig104.460.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=4134bp|location=Sequence derived from alignment at D-herbacea_F_contig104:246095..249985+ (Desmarestia herbacea DmunF female)
GACGGTTCCGTCGCCGAGCTTAACGTGACCACGACCCCGGAGGAGGATGC
CGCTCGCCGGGCTGCGGATAAGAAAAAGGCCGAGAGGAGAGCGGCGTATA
GGGCCTCCAAGATCTCGTCGCCAAAGGACAAGGAAGCCAAGAAGAAGGCC
AAGGGGGTGGCCGCCGCCGCGACGACTGCGACTGCGGGTGGGAGTGGCGA
CGGTGGTGGATCTAGGAAACGTTCAGAAGAACGGTCCGAGCAAAGGCCGT
GTTACTTGCGGATTACCATGAGGGACCAACTCCCGCCCGGGTGGGAGACA
ACCGTGCGCGAGCGCGCTGAGAATGATGTGGATGCGAGGGACGGTTCCGT
CGCCGAGCTTAACGTGACCACGACCCCGGAGGAGGATGCCGCTCGCCGGG
CTGCGGATAAGAAAAAGGCCGAGAGGAGAGCGGCGTATAGGGCCTCCAAG
ATCTCGTCGCCAAAGGACAAGGAAGCCAAGAAGAAGGCCAAGGGGGTGGC
CGCCGCCGCGACGACTGCGACTGCGGGTGGGAGTGGCGACGGTGGTGGAT
CTAGGAAACGTTCAGAAGAACGGTCCGAGCAAAGGCCGTGTTACTTGCGG
ATTACCATGAGGGACCAACTCCCGCCCGGGTGGGAGACAACCGTGCGCGA
GCGCGCTGAGAATGATGTGGATGCGAGGGGACAAGGAGCTTTTTGGTACT
CTTTCTCGAAAGGCGGAAACACCGTACGATTCAGATCCCTCAAGGACGTG
GAGAATTTCGTGAACTCGGACCATCCAGACGCCGCGCAGCATCGAAATGC
GGCACGAAAGAGAAAATACGGAGGTACAGCACTGTCGCCGTCACCAACAG
CAACGGGCAGAGGACCATCAACATCGCTGTCGCCATCGTCGTCGCACAAA
GCTTTTTCGGCGACGGGCTCCTTATTGCCTCCTGGAGACAAGGGTACGGA
CGCAGACAAAAAGAAGTTGCCGGGCAAGCTCAAGAAAAAGCGGAAAAAAA
TGCAGATCCCCGGCGTGCAGAAGTTCACGAAGGACGGGGTAAGGGTTTAT
TCCAAAGGAGGGACGTCGTACGTGAAGATAGGGGACAGGCTGCAGGAGGG
TGTGGCGCTGCCTCATGTCGAAAAGGGAGGGAAGAAGGGTGTTGCCCGTG
GTGGTGGTGGTGGTGGTGATGGCGTGTCGGAGACGGGTCCTTACGTGAAG
AAGAAGTATACCAAGAAGCCCGGGCCGAAGGGAGCAAACGTTGGGAAGGA
GGATGGCCAGGAACGGCAGAAGGAGACATCGAACACCAACAAACCCAAGC
TGAAAAAGAAGGCGGCCGCCGTCGCGACGGAGACCGAGGGCGTGAAGAAG
CACGGCAAGCTACCAGAGCTAAAAAAACACAACACCAAGCCTGGAATATC
GAAGGAAATACTAGACTGCCTGCCCCCCGGGAGCGGAGACGACTTGGACG
TGATCCCGGCGCAATTCAAGAAGCGGAAGCAGAAAGGGGAGGGGACGGGG
GCGGAGGGGGAACCCAAGAAGCGCCGGAAGAAAAAGTTGAAAGTGGCGCC
CGCACACACTGACCCTGGCGCGGAATCGGTGGCGAGGTTGCCGCCATCAT
CCCCTCCCGCGACGGCGTTATCGCCAAATGCCTCCGTTTTATCGGACGGC
GGTGTGTCGGGAGAGGAGCGTAAGAAAAAGCGAGGACGCCCTCTAGGCTC
GAAAAACAAGAAATGCAAGGGGGATAGCGTCGGCGGTGACGGTGATGGCG
ACGACTCCTCAAAATCTGGACAGAGGCCTAACAAACGTCCCAACACTACG
TCTCCCAAAGGCCGAGGGGGGGGGGCTGCCGGGAAGGAAAAGAGCGTCGT
TAAGAAGGTCCGGAGCGTGGAGGACAGCAGTGTTCGGAGGCGGGAATCTG
GGGCGGGGTTGGTGCTGTCGACCAGCGAGGGTAAGGTGATGCGTGCGGAA
GGTAGCGGGGAAGGTGGAAAGGTGATCAGCGGCGTGACCCTCAGTGAGGC
CCTCCGAAAGTCGTGTTCAGAAGCGATTAAGAGGGCCCGTGGCGTGGTGG
GCGCGGCTGTGTCGATGGACTCGTCTCCTCAGACGGGTGACAAGGCGGTA
GAGAAGAAGGACGAGGGTCAGGAGGTCTTAAAGGCGACTGGGAAGGATTG
GTCTTCGCCAGAGAAGGACAAGGAGACGCCAGAGGAGGACAAGAAGGAGA
CACCAGAGGAGGAAAATAAGAAGAAGACGCCAGGGGAGGGAAAGAAGAAG
AAACTGTTGTCGGCACCGCAGCGCCGACACTCTGCTGGAGACGTGAGCAA
AGGCAAGAAAGGTGTCAGTGGTGAGCGGGATCCGGTTCGAAACCGCAAGG
GGGGGAGACCGTCTCTGCCGGCTCCATCTCTCAAGAACGTATCCGGCGGC
AGCAAGGGACAAGGAGCTTTTTGGTACTCTTTCTCGAAAGGCGGAAACAC
CGTACGATTCAGATCCCTCAAGGACGTGGAGAATTTCGTGAACTCGGACC
ATCCAGACGCCGCGCAGCATCGAAATGCGGCACGAAAGAGAAAATACGGA
GGTACAGCACTGTCGCCGTCACCAACAGCAACGGGCAGAGGACCATCAAC
ATCGCTGTCGCCATCGTCGTCGCACAAAGCTTTTTCGGCGACGGGCTCCT
TATTGCCTCCTGGAGACAAGGGTACGGACGCAGACAAAAAGAAGTTGCCG
GGCAAGCTCAAGAAAAAGCGGAAAAAAATGCAGATCCCCGGCGTGCAGAA
GTTCACGAAGGACGGGGTAAGGGTTTATTCCAAAGGAGGGACGTCGTACG
TGAAGATAGGGGACAGGCTGCAGGAGGGTGTGGCGCTGCCTCATGTCGAA
AAGGGAGGGAAGAAGGGTGTTGCCCGTGGTGGTGGTGGTGGTGGTGATGG
CGTGTCGGAGACGGGTCCTTACGTGAAGAAGAAGTATACCAAGAAGCCCG
GGCCGAAGGGAGCAAACGTTGGGAAGGAGGATGGCCAGGAACGGCAGAAG
GAGACATCGAACACCAACAAACCCAAGCTGAAAAAGAAGGCGGCCGCCGT
CGCGACGGAGACCGAGGGCGTGAAGAAGCACGGCAAGCTACCAGAGCTAA
AAAAACACAACACCAAGCCTGGAATATCGAAGGAAATACTAGACTGCCTG
CCCCCCGGGAGCGGAGACGACTTGGACGTGATCCCGGCGCAATTCAAGAA
GCGGAAGCAGAAAGGGGAGGGGACGGGGGCGGAGGGGGAACCCAAGAAGC
GCCGGAAGAAAAAGTTGAAAGTGGCGCCCGCACACACTGACCCTGGCGCG
GAATCGGTGGCGAGGTTGCCGCCATCATCCCCTCCCGCGACGGCGTTATC
GCCAAATGCCTCCGTTTTATCGGACGGCGGTGTGTCGGGAGAGGAGCGTA
AGAAAAAGCGAGGACGCCCTCTAGGCTCGAAAAACAAGAAATGCAAGGGG
GATAGCGTCGGCGGTGACGGTGATGGCGACGACTCCTCAAAATCTGGACA
GAGGCCTAACAAACGTCCCAACACTACGTCTCCCAAAGGCCGAGGGGGGG
GGGCTGCCGGGAAGGAAAAGAGCGTCGTTAAGAAGGTCCGGAGCGTGGAG
GACAGCAGTGTTCGGAGGCGGGAATCTGGGGCGGGGTTGGTGCTGTCGAC
CAGCGAGGGTAAGGTGATGCGTGCGGAAGGTAGCGGGGAAGGTGGAAAGG
TGATCAGCGGCGTGACCCTCAGTGAGGCCCTCCGAAAGTCGTGTTCAGAA
GCGATTAAGAGGGCCCGTGGCGTGGTGGGCGCGGCTGTGTCGATGGACTC
GTCTCCTCAGACGGGTGACAAGGCGGTAGAGAAGAAGGACGAGGGTCAGG
AGGTCTTAAAGGCGACTGGGAAGGATTGGTCTTCGCCAGAGAAGGACAAG
GAGACGCCAGAGGAGGACAAGAAGGAGACACCAGAGGAGGAAAATAAGAA
GAAGACGCCAGGGGAGGGAAAGAAGAAGAAACTGTTGTCGGCACCGCAGC
GCCGACACTCTGCTGGAGACGTGAGCAAAGGCAAGAAAGGTGTCAGTGGT
GAGCGGGATCCGGTTCGAAACCGCAAGGGGGGGAGACCGTCTCTGCCGGC
TCCATCTCTCAAGAACGTATCCGGCGGCAGCAAG
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