mRNA_D-herbacea_F_contig104.456.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig104.456.1
Unique NamemRNA_D-herbacea_F_contig104.456.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: D7G169_ECTSI (Pyridoxal kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G169_ECTSI)

HSP 1 Score: 331 bits (848), Expect = 9.510e-110
Identity = 164/187 (87.70%), Postives = 174/187 (93.05%), Query Frame = 1 
Query:    1 MSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRL 561
            M+SGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDP+NSV FSNHTGYA FEGTVLQGEEL+ LL GLESN LL GYTH+LTGY+GSPSFL AV+DVHRRLK ANP +LFICDPVLGD+GRLYVPAEN  IYREEVLPLATMITPNQ+EAELLSGVTI TEEDAVRAC ALHARGP+TVVITSSRL
Sbjct:    1 MASGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGEELSRLLQGLESNNLLRGYTHVLTGYVGSPSFLHAVLDVHRRLKEANPALLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTILTEEDAVRACTALHARGPDTVVITSSRL 187
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: C1E6L1_MICCC (Pyridoxal kinase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E6L1_MICCC)

HSP 1 Score: 254 bits (648), Expect = 1.610e-81
Identity = 123/186 (66.13%), Postives = 151/186 (81.18%), Query Frame = 1 
Query:    4 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRL 561
            SS GR L+IQSHVV GYVGNKC+VFPLQL GFDVDPI SV FSNHTGY  ++G V+ GE+L  L+ GLE NGLL GYTH+LTGYIGS S LR V  + R+L+  NP ++++CDPVLGD GRLYVPAE  +IYREE++PLAT++TPNQ+EAELL+G+TI +EEDA+ AC +LH  GP +VV+TS  L
Sbjct:    5 SSTGRALTIQSHVVSGYVGNKCAVFPLQLHGFDVDPILSVQFSNHTGYGCWKGEVMTGEQLQSLVEGLEQNGLLEGYTHLLTGYIGSASMLRTVARLVRKLRTYNPNLVYVCDPVLGDNGRLYVPAELTTIYREEIVPLATLLTPNQFEAELLTGMTIGSEEDALAACASLHQAGPPSVVLTSLDL 190
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: A0A7S2SQK9_9STRA (Pyridoxal kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQK9_9STRA)

HSP 1 Score: 251 bits (641), Expect = 4.510e-80
Identity = 124/179 (69.27%), Postives = 145/179 (81.01%), Query Frame = 1 
Query:   16 RVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITS 552
            RVLSIQSHVV GYVGNK +VFPLQL GFDVD +NSV FSNHTGY TF G VL GE+L  L+ GL SNGLL GY+H+LTGYIGS SFLRAV  V+RRLK  NPG++++CDPVLGD G+LYVP E   IYREE+LPLAT++TPNQ+E E L G  + TEEDAV AC+ LH +GP+ VV+TS
Sbjct:   19 RVLSIQSHVVHGYVGNKSAVFPLQLHGFDVDFVNSVQFSNHTGYKTFTGEVLNGEQLEKLVEGLASNGLLEGYSHLLTGYIGSVSFLRAVCSVYRRLKEQNPGLVYVCDPVLGDNGKLYVPQELVQIYREEMLPLATILTPNQFECEQLLGQPMVTEEDAVFACLWLHRQGPQVVVVTS 197
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: A0A0A7ACX8_9CHLO (Pyridoxal kinase (Fragment) n=1 Tax=Micromonas sp. CCMP2099 TaxID=1442574 RepID=A0A0A7ACX8_9CHLO)

HSP 1 Score: 250 bits (638), Expect = 1.900e-79
Identity = 123/186 (66.13%), Postives = 150/186 (80.65%), Query Frame = 1 
Query:    4 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRL 561
            +S GR L+IQSHVV GYVGNKC+VFPLQL GFDVDPI SV FSNHTGY T+ G V+ G++L  ++ GLESNGLL GYTH+LTGYIGS S LR V  + R+LK+ NP ++++CDPVLGD G+LYVPAE   IYR+EV+PLATM+TPNQ+EAELL+G+TI TE DA+ AC  L A GP +VV+TS  L
Sbjct:   72 TSTGRCLTIQSHVVSGYVGNKCAVFPLQLHGFDVDPILSVQFSNHTGYGTWRGDVMTGDQLQAIVEGLESNGLLDGYTHVLTGYIGSASMLRTVARLVRKLKMLNPQLVYVCDPVLGDNGKLYVPAELVGIYRDEVVPLATMLTPNQFEAELLTGMTISTENDALVACKQLLATGPTSVVLTSLDL 257
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: UPI00053F886A (pyridoxal kinase isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F886A)

HSP 1 Score: 248 bits (633), Expect = 9.890e-79
Identity = 122/188 (64.89%), Postives = 152/188 (80.85%), Query Frame = 1 
Query:    4 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRLGG 567
            S  GRVLSIQSH V+GYVGNK +VFPLQLLG+DVDPINSV FSNHTGY TF+G VL G+EL  L+ GLE+NGLL  YTH+LTGYIGS SFL  V++V  +L+  NPG+L++CDPV+GDEG+LYVP +  S+YRE+V+P+A+M+TPNQ+EAELL+G+ I +E+D   AC  LHA GP  VVITS  + G
Sbjct:   54 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPTFKGQVLNGKELWDLVEGLEANGLLF-YTHLLTGYIGSVSFLNNVLEVVTKLRSVNPGLLYVCDPVMGDEGKLYVPEDLVSVYREKVVPVASMLTPNQFEAELLTGLRIVSEQDGREACSKLHAAGPAKVVITSINIDG 240
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: A0A022PXU8_ERYGU (Pyridoxal kinase n=7 Tax=Lamiales TaxID=4143 RepID=A0A022PXU8_ERYGU)

HSP 1 Score: 244 bits (624), Expect = 6.500e-78
Identity = 120/188 (63.83%), Postives = 149/188 (79.26%), Query Frame = 1 
Query:    4 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRLGG 567
            S  GRVLSIQSH V+GYVGNK ++FPLQLLG+DVDPINSV FSNHTGY TF+G VL G++L  L+ GLE+N LL  YTH+LTGYIGS SFL  V+ V  +L+  NPG+ ++CDPVLGDEG+LYVP E  S+YRE+VLP+A+M+TPNQ+EAELL+G+ I +E+D   AC  LH+ GP  VVITS  + G
Sbjct:   13 SETGRVLSIQSHTVQGYVGNKSAIFPLQLLGYDVDPINSVQFSNHTGYPTFKGQVLNGDQLWELIEGLEANNLLF-YTHLLTGYIGSVSFLNTVLKVVDKLRSINPGLTYVCDPVLGDEGKLYVPRELVSVYREKVLPVASMLTPNQFEAELLTGLRIVSEQDGREACNTLHSAGPSKVVITSINIDG 199
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: A0A1D6MVV4_MAIZE (Pyridoxal kinase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6MVV4_MAIZE)

HSP 1 Score: 241 bits (614), Expect = 7.520e-78
Identity = 118/188 (62.77%), Postives = 149/188 (79.26%), Query Frame = 1 
Query:    4 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRLGG 567
            S  GRVLSIQSH V+GYVGNK +VFPLQLLGFDVDPINSV FSNHTGY TF G VL G++L  L+ GLE N LL  YTH+LTGYIGS SFL  V+ V  +L+  NP ++++CDPVLGDEG+LYVP E  S+Y+++V+P+A+M+TPNQ+E ELL+G+ I +EED + AC  LH+ GP+ VVITS+ + G
Sbjct:   13 SDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPTFRGQVLNGKQLWDLIEGLEENQLLH-YTHLLTGYIGSVSFLDTVLQVVEKLRSVNPDLVYVCDPVLGDEGKLYVPQELISVYQQKVVPVASMLTPNQFEVELLTGLRITSEEDGLTACNTLHSAGPQKVVITSALIEG 199
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: C1MUU3_MICPC (Pyridoxal kinase n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MUU3_MICPC)

HSP 1 Score: 244 bits (622), Expect = 7.680e-78
Identity = 117/186 (62.90%), Postives = 148/186 (79.57%), Query Frame = 1 
Query:    4 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRL 561
            SS GR L+IQSHVV GYVGNKC+VFPLQL GFDVDPI SV FSNHTGY +++G V+ G++L  L+ GLE+NGLL GYTH+LTGYIGS S LR V  + R+L+  NP ++++CDPVLGD G++YVPA    IYR+E++PLAT++ PNQ+EAELL+G  I +E+DA+ AC ALHA GP  VV+TS  L
Sbjct:    5 SSTGRALTIQSHVVSGYVGNKCAVFPLQLHGFDVDPILSVQFSNHTGYGSWKGEVMTGDQLWSLVEGLETNGLLKGYTHLLTGYIGSASMLRTVARLVRKLRQHNPDLVYVCDPVLGDNGKMYVPAPLVGIYRDEIVPLATLVVPNQFEAELLTGSPIASEDDAIAACAALHAMGPPNVVLTSVDL 190
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: PDXK_ARATH (Pyridoxal kinase n=32 Tax=Brassicaceae TaxID=3700 RepID=PDXK_ARATH)

HSP 1 Score: 244 bits (623), Expect = 9.210e-78
Identity = 119/188 (63.30%), Postives = 149/188 (79.26%), Query Frame = 1 
Query:    4 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRLGG 567
            S  GRVLSIQSH V+GYVGNK +VFPLQLLG+DVDPINSV FSNHTGY TF+G VL G++L  L+ GLE+N LL  YTH+LTGYIGS SFL  +++V  +L+  NP + ++CDPV+GDEG+LYVP E   +YRE+V+PLA+M+TPNQ+EAE L+G+ I++EED   AC  LHA GP  VVITS  +GG
Sbjct:   13 SDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANDLLF-YTHVLTGYIGSVSFLDTILEVINKLRSVNPNLTYVCDPVMGDEGKLYVPEELVHVYREKVVPLASMLTPNQFEAEKLTGLRINSEEDGREACAILHAAGPSKVVITSITIGG 199
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BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Match: A0A7R9Y7X1_MICPS (Pyridoxal kinase n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y7X1_MICPS)

HSP 1 Score: 244 bits (622), Expect = 1.120e-77
Identity = 117/186 (62.90%), Postives = 148/186 (79.57%), Query Frame = 1 
Query:    4 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYATFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHRRLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYEAELLSGVTIHTEEDAVRACMALHARGPETVVITSSRL 561
            SS GR L+IQSHVV GYVGNKC+VFPLQL GFDVDPI SV FSNHTGY +++G V+ G++L  L+ GLE+NGLL GYTH+LTGYIGS S LR V  + R+L+  NP ++++CDPVLGD G++YVPA    IYR+E++PLAT++ PNQ+EAELL+G  I +E+DA+ AC ALHA GP  VV+TS  L
Sbjct:   67 SSTGRALTIQSHVVSGYVGNKCAVFPLQLHGFDVDPILSVQFSNHTGYGSWKGEVMTGDQLWSLVEGLETNGLLKGYTHLLTGYIGSASMLRTVARLVRKLRQHNPDLVYVCDPVLGDNGKMYVPAPLVGIYRDEIVPLATLVVPNQFEAELLTGSPIASEDDAIAACAALHAMGPPNVVLTSVDL 252
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig104.456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G169_ECTSI9.510e-11087.70Pyridoxal kinase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
C1E6L1_MICCC1.610e-8166.13Pyridoxal kinase n=1 Tax=Micromonas commoda (strai... [more]
A0A7S2SQK9_9STRA4.510e-8069.27Pyridoxal kinase n=1 Tax=Rhizochromulina marina Ta... [more]
A0A0A7ACX8_9CHLO1.900e-7966.13Pyridoxal kinase (Fragment) n=1 Tax=Micromonas sp.... [more]
UPI00053F886A9.890e-7964.89pyridoxal kinase isoform X1 n=2 Tax=Beta vulgaris ... [more]
A0A022PXU8_ERYGU6.500e-7863.83Pyridoxal kinase n=7 Tax=Lamiales TaxID=4143 RepID... [more]
A0A1D6MVV4_MAIZE7.520e-7862.77Pyridoxal kinase n=1 Tax=Zea mays TaxID=4577 RepID... [more]
C1MUU3_MICPC7.680e-7862.90Pyridoxal kinase n=1 Tax=Micromonas pusilla (strai... [more]
PDXK_ARATH9.210e-7863.30Pyridoxal kinase n=32 Tax=Brassicaceae TaxID=3700 ... [more]
A0A7R9Y7X1_MICPS1.120e-7762.90Pyridoxal kinase n=1 Tax=Micromonas pusilla TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig104contigD-herbacea_F_contig104:207347..213738 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score334.3
Seed ortholog evalue3.9e-89
Seed eggNOG ortholog2880.D7G169
Preferred namePDXK
KEGG rclassRC00002,RC00017
KEGG koko:K00868,ko:K02145
KEGG TC3.A.2.2
KEGG ReactionR00174,R01909,R02493
KEGG Pathwayko00190,ko00750,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map00750,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000278,GO:0000281,GO:0000282,GO:0000287,GO:0000910,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006970,GO:0006972,GO:0007049,GO:0007154,GO:0007163,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008283,GO:0008478,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009267,GO:0009314,GO:0009443,GO:0009605,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009888,GO:0009987,GO:0009991,GO:0010015,GO:0010033,GO:0010053,GO:0010054,GO:0010165,GO:0010212,GO:0010243,GO:0010941,GO:0012505,GO:0014070,GO:0014075,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017085,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019842,GO:0019954,GO:0022402,GO:0022622,GO:0030010,GO:0030141,GO:0030154,GO:0030170,GO:0030554,GO:0030587,GO:0030955,GO:0031152,GO:0031402,GO:0031403,GO:0031410,GO:0031420,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032094,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032570,GO:0032940,GO:0033554,GO:0033993,GO:0034284,GO:0034641,GO:0034774,GO:0035580,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042364,GO:0042493,GO:0042538,GO:0042581,GO:0042594,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043094,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0045055,GO:0045321,GO:0046184,GO:0046483,GO:0046872,GO:0046903,GO:0046914,GO:0046983,GO:0048037,GO:0048364,GO:0048519,GO:0048523,GO:0048545,GO:0048731,GO:0048856,GO:0048869,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051301,GO:0051703,GO:0051704,GO:0051716,GO:0060205,GO:0060548,GO:0061640,GO:0065007,GO:0070013,GO:0070279,GO:0070280,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0090702,GO:0097159,GO:0097367,GO:0097708,GO:0098630,GO:0098743,GO:0099120,GO:0099402,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901654,GO:1901698,GO:1901700,GO:1901701,GO:1903047,GO:1905392
EggNOG free text desc.pyridoxal 5'-phosphate salvage
EggNOG OGsCOG2240@1,KOG2599@2759
Ec32 ortholog descriptionPyridoxamine kinase
Ec32 orthologEc-02_001230.1
EC2.7.1.35,3.6.3.14
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size621
Cds size621
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig104.456.1prot_D-herbacea_F_contig104.456.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig104 207347..213738 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927449.139622-CDS-D-herbacea_F_contig104:207346..2074431622927449.139622-CDS-D-herbacea_F_contig104:207346..207443Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 207347..207443 -
1690790176.965155-CDS-D-herbacea_F_contig104:207346..2074431690790176.965155-CDS-D-herbacea_F_contig104:207346..207443Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 207347..207443 -
1622927449.1517625-CDS-D-herbacea_F_contig104:209143..2093221622927449.1517625-CDS-D-herbacea_F_contig104:209143..209322Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 209144..209322 -
1690790176.9776876-CDS-D-herbacea_F_contig104:209143..2093221690790176.9776876-CDS-D-herbacea_F_contig104:209143..209322Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 209144..209322 -
1622927449.1898174-CDS-D-herbacea_F_contig104:210120..2102161622927449.1898174-CDS-D-herbacea_F_contig104:210120..210216Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 210121..210216 -
1690790176.9850926-CDS-D-herbacea_F_contig104:210120..2102161690790176.9850926-CDS-D-herbacea_F_contig104:210120..210216Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 210121..210216 -
1622927449.2848396-CDS-D-herbacea_F_contig104:211213..2113201622927449.2848396-CDS-D-herbacea_F_contig104:211213..211320Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 211214..211320 -
1690790176.9924712-CDS-D-herbacea_F_contig104:211213..2113201690790176.9924712-CDS-D-herbacea_F_contig104:211213..211320Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 211214..211320 -
1622927449.2959852-CDS-D-herbacea_F_contig104:212973..2130891622927449.2959852-CDS-D-herbacea_F_contig104:212973..213089Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 212974..213089 -
1690790177.000162-CDS-D-herbacea_F_contig104:212973..2130891690790177.000162-CDS-D-herbacea_F_contig104:212973..213089Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 212974..213089 -
1622927449.3093114-CDS-D-herbacea_F_contig104:213712..2137381622927449.3093114-CDS-D-herbacea_F_contig104:213712..213738Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 213713..213738 -
1690790177.0080757-CDS-D-herbacea_F_contig104:213712..2137381690790177.0080757-CDS-D-herbacea_F_contig104:213712..213738Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig104 213713..213738 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig104.456.1

>prot_D-herbacea_F_contig104.456.1 ID=prot_D-herbacea_F_contig104.456.1|Name=mRNA_D-herbacea_F_contig104.456.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=207bp
MSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPINSVHFSNHTGYA
TFEGTVLQGEELTHLLHGLESNGLLGGYTHMLTGYIGSPSFLRAVIDVHR
RLKIANPGMLFICDPVLGDEGRLYVPAENASIYREEVLPLATMITPNQYE
AELLSGVTIHTEEDAVRACMALHARGPETVVITSSRLGGGAIGATGRVAG
ANGDRDD
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mRNA from alignment at D-herbacea_F_contig104:207347..213738-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig104.456.1 ID=mRNA_D-herbacea_F_contig104.456.1|Name=mRNA_D-herbacea_F_contig104.456.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6392bp|location=Sequence derived from alignment at D-herbacea_F_contig104:207347..213738- (Desmarestia herbacea DmunF female)
ATGAGCTCAGGAGGGAGGGTGCTGAGGTAAGAGAATTGTTTATTTTAGGA
ACTGCCTGTCTGCTTGGGGACTACACCACTGGTTTCTGTGCCAAGGGAGT
GTTTTTTTTTGTGTCGAAGTTTCGTTTCGTACGCATTTACACTTTTTTTT
TTTTTTTGTGTTTTATGCCTTGGGGCCGTTCTGTACTCTGTGCTGTGAGT
GCTTGCTGTTGGTGCTTGGCATGGGTGATGGTGTGACGGTACTTGAGCTC
CGTTCGTGCAAAGCTGGTCTGTTGCGTTGTTTGGGCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCCCTCGTTGCCGTGCTGTG
CTTGCCTGAGAACGTCTGCTTTTTGTGGAGGCATACCTACCTCTGTGCGA
AGTGTTGTAGGGTTGGCGACAAATGTCCTGGCTGCTGCTGTGTACACGTG
CCGATAGTTCTTCGCAAGGTGTATCGCACCATAGGCGTTGCATGCGGTGG
CGCACTTTCCGTGTCTGCTGCTTCATTCCCCGACTCATGCGTTGGATCAC
CGGCTAATGTTTTTATTCCCTCCCGATACCTTCTTCCGTCCGTCCGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTGATACAACAGT
ATTCAGTCCCACGTCGTGCGCGGGTACGTAGGCAACAAGTGCTCGGTCTT
CCCCCTGCAGCTCCTCGGTTTCGACGTCGACCCCATCAACTCTGTGCATT
TCTCCAACCACACAGGTCTGGAGCCGCCTTTAGCGCTTTTGTACCCTGGA
TCTTGAGGATGTTCGCTTTATTATATCATTAGTAACAGCGTGGGCTGTGT
CAGAAGTTTGGAAAATTCTACCACCCGAACCCTACGTAGCCAAACACACC
ATGATACTCGTACTGTACAATTAATTATAGATAATAGAGACTTAAAGCCT
CTGTAAGGTTCCTGTAAAGTTCTGTCCCACAACAACGCTAAACCTACTGC
AGGTCGGTCACCAACCAGCCAGCTAGCCAGCCAGCCGCCCAGTCCGTTGT
AGGACCTGTTTGGTGTCCTCGTGCTTCGCTGCCTAATCATGGTGTGACGC
ATCGGCGCATTTTCCCCTCCCGGATTGTCCTCGTGTTTTGGAGTCTTGAG
GCCCAAAACCCAAAAACCCGAAACCTATCTCTTCGCGGGGAGATCATTCA
TGCCGTATGATATGTCCGTTTGTATACGCAGAATACAGAGAGAGCGAAGC
ATTTATACATAATACTCCGGGCTCAACCCCAGAGAAAAATACCTGGGTAT
GCATGGTATGGTAGCAGAACTGAACTACCAGTAATACTCCGAAGTACAGG
TTTTCAGAGCTACACTGGACGCGATCCAGCCTTTGGATGGACGCGGCGGG
CGGGGGAGGTACAGCCGCGGTCGGCGCTGAGTTTACCGCTTTACTACGGT
GGACGACGGCGAATAACTTGGCTGTTCTGTCCCCCCCTTCGTCGTGCGTT
ACTACTGTAAACACGCACACGCCGGAGCATGATCTCTTAGCGTGTAGAAA
GCCGATACATATGTACTTACGTCTACTGGTATCTATTTTATTTGTTTCCA
TGTGCGTCTGATCGTGCACGTCCGATCCACTAGGAAGAGGCTTTTGCTTC
AGTTTTCTGGCGAAAAAGTCCGGCGAAAAAAAAGCCTCGCCTCTCTCGAA
AATTTTCGCCTCATCATAAAGTACTGTATTCCAGTATATAACAACCAGCG
GTACAGCAGTAGTACTTCAGGATTTGCGCAGCATTGCGCGGGGCGAACGT
CGCAAGACATTATTATAGCAAAGTGTCGCGTTTGTGTGTCCCGGTTTTTG
GGGACCCACCGGTGCGGACGAGGACTAGACGGAACCTTACGCCATGCCAT
GGGCGCCATGCCTATGATATCATAGCATGCAACACGTAGTTTTTTTGTAT
GCTCGCAGAAGCATTGGGTTGTAGGGTGTAACGAATGCAATAGTACTACT
ACTGTACCATGTACTTGGCATGTAATATATGGTAGTATCACGCCTCTCGG
CACACGTTGTATCGTGTCGTGTCGTTTCGTTTCGTTCCGTTGTTTTTTTC
TTACGGCTTTGCTGGCGTTGTAATATCTTTGGGCCGATCTCGAATCCGAA
CCTGTTGTGAGTTTTGAGCAGGGTCAGGGCTTTCGTTGGCCGAATCTTTA
GGATGTTTGTTTTATTAGATGTATGATGTATGATTAGTATCAACGTGGGC
CGTTCAGCAGTTCGGAAAATTCTGCCCCTAACCCCCTAAACTGCACCCTA
ACGAACACACTGTACTAATAGAGTCAAAACATCTATAAAGTTCCTGTAAA
AATCAGTCCTACAACCATTGTTGCTAAACCTACTGCCTGTTTTCGTGTGT
TGGATTTTGGTCGGGCAGGTTATGCGACGTTTGAGGGAACCGTGCTGCAG
GGAGAGGAGCTGACCCATCTTTTGCACGGCCTAGAATCGAATGGCCTTCT
CGGCGGCTACACGCATATGCTCACGGTATGTACGGCCGATGCTCGGTTCA
CACACGTGTTTATGACTACTACTTATGTCATATTTGGCGCTTTTAGAAGC
TCTAGAGGCTATAGGACTATATAATAGTGTGAAGAGCGTACTCGTAGAGC
TCTAGAACTCTCGATAGACTCCCTATGTATAGTCGTTTTTGAAGAGCTGT
AGCTCGATACTTCTCTAGGTCATTTGACTGCGTACGCCGTTTTTGAAGAG
CTGTAGCTCGATACTTCTCTAAGTCTTTTGACTGCATACACCGTTTTTGA
AGAGCTGTAGCTCTTTACCCCTCTAAATCGTTAGACTGCATCCGTCGTAT
GATATGCATGCGGATATAACGTACACTGTTGGTTCTTGTGAACCGGTGAA
CGTGGGTCCCTGTGGAAGTTGGCCTCATGAGGTCGTATGAGGTTCCCGTG
CAGCTTGATGCGTCCACGGTCGATCTTCCAACTTGCGAGAGCCAAATGGG
TGCGTATCGGACGATATGCTCCCACTGTAACAGCGCGTGCGAGAGATAAC
GAGAGAGAGAGGATAGAGGAGAGAGAGGAGAGAGGTTTGTGCCAGTGAAA
CGACGCAACATGAAGGCTCTCTGCCGTTCTCCTTGGCAGCACGCCTGGAG
GAACACAGCGCGCAGTATCTTTGTCGCTCACAAAACAGTTCTCTAGTCCG
GTGCTTAATGTTTTGACATCGATCGAAATAATGTGAAGACGTGTCGTCAC
CCTCGTCCCAATTTCAACGAGCAGCATCGCGCTTGATGATGCAGCTCATA
TAATGCGTAACCAACCACGCTTGACGCGAGGAACATCTTGTGCTAACCCC
CCCCCCCCCCCCTCCCCGTCCATCCTGGCCGGTGAAACCCGACGTGCACT
GTCCCGGCATTATAGGGATGGGAGGGTCTATGGTCTTACGACTACGGCCA
TTCATGAAATGAGTATACCCCCTCCTCCCGCTCACCCGTCCGTGTTGCGG
TGCTCTGATGTTCTGCCTTCAGGGGTACATCGGCTCTCCTTCCTTTCTGC
GTGCGGTAATAGATGTCCACCGAAGGCTCAAAATTGCCAACCCGGGCATG
CTCTTCATCTGCGACCCGGTCAGTGCCCGCCTGTGCATGCCATACAAAAT
CCCGTGTGTATATGCGGAGGAGCCCCCATTTCACCTTGTTTCGACAGGAT
GGGTAGGATGTTCTTCGTCTTATTGTTACTAATAGTACCAACGCGGGCTG
TTGAGCAGTTCGGTATTTTGTTTTTTAGCACTATCCCTATCCCTATCGAC
CGCACTATAATACCGGCGAGTAAAAATGTCCCTAAATATCGTATCGAACA
AGGTGTAAGGTCTAAGGACCGCTGTATATGCGTGTCTGCGCTAGAATGCA
ACTCGGATAGATTGCATCGCGTAGACAATATTTGAAGGACGTCCGAGTAG
GGCGCGCACGTGTGTTGCTATGATAGGGGTTGTGATTGTAAGCCGGGGCG
GGGGCTTGCTCTCGTAGTAACGTCGTTGATAGGCACTACTGTCCATTGAC
TTTGCACCCCTTCAGTGCCGGGACATGGTAGTATTACAGCGGAGGGTTTG
TCGTCCGTCACAAATGAGTCGCGCCCACTAGGGTATGGTCAGCGCTGACT
GTTGTAGTTCAAGGGTTGCGACTAGCACAGCTAAGACGTTGTCTGTTCCC
TGGAGTGCGTTTTTGAAGCATTTGCTTGGTACTTTTTACGCAAGAGCGGG
TAGATCGCACGATTGACATGTAGTAGACACGGACGTTGCTTAGAAGCGAG
GGGCCTATTTTCTCTCTGTGGTTTGGAAGGCATGCCATCATGGAGGTGCT
GACCCTCCGTGCCTCTGCTTTTTTTTTTCTCCTTTTCGGCGACATTTTCT
ATTCGTGATGCTGCAGGTGTTGGGGGACGAGGGAAGGTTGTACGTGCCCG
CGGAGAACGCGAGCATTTACCGTGAGGAGGTGCTGCCACTTGCGACGATG
ATCACGCCGAACCAATACGAGGCGGAGCTGCTGTCTGGGGTGACGATTCA
CACCGAAGAAGATGCGGTTCGCGCCTGCATGGCCCTGCACGCGAGGCAAG
ACAAATTGTTTTTTCGAGAGTGAACACGTCGGACCGTTCCGATGACTTTG
TTTGGAGTAGTACCATAGCCACTGAGCTGTTGAGTCGGCGCTGACTAAAT
AGCTCAGTGGTTGTTGTTGTCGGAATGAAATGGAATGTACGTTGACTTTA
CAACTGCACACTGGTATGCCTTTTGTGTTACATACGGGTACGTCAACTAT
TTTTGTGTGCCGACTACTATGCATATAATATCAGTTTAGGGATACTACAT
GTGTAGTCTATATAGTACGTAAATCTTTGTTACGTTTTTGTGGCTGGTGT
TGTACAGCTGTTGGGCCCGAAGGTCGAGGTTGATCCGGCAGCAATTTTGT
ACATTGGCATGCAACGGCGTTTTACTCTGTCCGAGGGAAGAAGGGAAGAC
ACCTGTGACCACGGGTTGGTCAGACAGGCGCGCTGAGCGATGAGTGGAAG
GTTTCCTGCGATCTATGGACTGGGAAGTCGAAGTGATGGATAGTATATAT
GTATTGTGTCATGATGGGTTTGCCTTTTTTGGAGGTTGCAGAACCTCACC
ATCTCCCGGTTCCCCGTTGCTGGTTGGCGATACTGAATAGTGGAAAACCC
AGGGCGTGCGTTCAATCTATCAAGTATTTTTTTATCCGTCACTTTTGACT
TTTCCCCGCTCAGTCTGCAGGAGGATATCGCCCAACGCGGCGGTGTGGGT
AAAGCCCTGGTCACAGGTGCCTTACCATTCCTCCCCCTCTTCCCCCTGGT
AAACAGGAAGGGGATAAGATGAGCACAAGTTTTGTATGTAAAATATGGCA
AAACACTTAAAAGAGAGATGTCTCCATTAGGAGTAGGAACGGTGCTCCGT
CTCGAAAGGGATGCGTGGTCAATGGTCAAATTATTAAGGCAAGTCACAAA
TGAGTGCCCCCCCCCCCCCCCCAATGGTCAAATTACTAAGGCAAGTAACA
AATGCGTACCCCCCCCCCAATGGTCAAATTACTAAGGCAATTAGCAAATG
AATCCCCCTCCCCCCTTCCCCCGTGGTACTCGCCTTGGTTTTATCGCGAA
CAGGGTTTGACGTTTCCATGGCTCGTCGGCTATTGCCATCGTATTGTACT
TACTCGCGCTCTCGCTCTTTCCGCGAGGGAAGACGATACAGAAAAAAATG
TGCACCGTACCAGGATTCGAACCCTCGAATTACCGCCAACGGGGGCGGCA
GCTGACCATGAGACCATACGTATGCACGATATACACGCAAGACTGGAAAT
CAAACCGTCCCGCATGTTGGAAGATACCGTCATACTGCTGCTTTAACTAG
GTTCTGGCGCGGTAGTATAAATGTATGTGTTAATTTAATACCTACTTATA
GACAGACTCTGTCGTATTTGTGTTGGTATACGAAAAAATCGCCTAATTTT
TGATATCCTGCATATACACGAGGTCCCTCTGTTGTTGTTTCTTTTTTCAA
CTAACGCTTTTTTTAACCCTGAAGTCATGCTACTGTAGAGGGGGGCATTT
TTGGACCTGGATTTCATAGGCTCAGGGCCACTCGCGAGAGTGACTATCCC
GTATCTATGCGGTCGTCAACGTGTGGGCAATTTCCTTTCGCGATGTGAAC
CACCATATTATTGTTCAGTGCGCTGGGCGAACAAAATGTTTAAAAACTCT
TTGTTGTTGTTGTTGTTGTTGTCTCCAACCGACTATGCTACGCAGGGGAC
CAGAGACGGTAGTGATCACCAGCAGCCGACTTGGCGGCGGCGCAATTGGG
GCGACGGGGAGAGTAGCAGGGGCCAACGGAGACAGGGACGAC
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Coding sequence (CDS) from alignment at D-herbacea_F_contig104:207347..213738-

>mRNA_D-herbacea_F_contig104.456.1 ID=mRNA_D-herbacea_F_contig104.456.1|Name=mRNA_D-herbacea_F_contig104.456.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1242bp|location=Sequence derived from alignment at D-herbacea_F_contig104:207347..213738- (Desmarestia herbacea DmunF female)
ATGAGCTCAGGAGGGAGGGTGCTGAGATGAGCTCAGGAGGGAGGGTGCTG
AGTATTCAGTCCCACGTCGTGCGCGGGTACGTAGGCAACAAGTGCTCGGT
CTTCCCCCTGCAGCTCCTCGGTTTCGACGTCGACCCCATCAACTCTGTGC
ATTTCTCCAACCACACAGTATTCAGTCCCACGTCGTGCGCGGGTACGTAG
GCAACAAGTGCTCGGTCTTCCCCCTGCAGCTCCTCGGTTTCGACGTCGAC
CCCATCAACTCTGTGCATTTCTCCAACCACACAGGTTATGCGACGTTTGA
GGGAACCGTGCTGCAGGGAGAGGAGCTGACCCATCTTTTGCACGGCCTAG
AATCGAATGGCCTTCTCGGCGGCTACACGCATATGCTCACGGTTATGCGA
CGTTTGAGGGAACCGTGCTGCAGGGAGAGGAGCTGACCCATCTTTTGCAC
GGCCTAGAATCGAATGGCCTTCTCGGCGGCTACACGCATATGCTCACGGG
GTACATCGGCTCTCCTTCCTTTCTGCGTGCGGTAATAGATGTCCACCGAA
GGCTCAAAATTGCCAACCCGGGCATGCTCTTCATCTGCGACCCGGGGTAC
ATCGGCTCTCCTTCCTTTCTGCGTGCGGTAATAGATGTCCACCGAAGGCT
CAAAATTGCCAACCCGGGCATGCTCTTCATCTGCGACCCGGTGTTGGGGG
ACGAGGGAAGGTTGTACGTGCCCGCGGAGAACGCGAGCATTTACCGTGAG
GAGGTGCTGCCACTTGCGACGATGATCACGCCGAACCAATACGAGGCGGA
GCTGCTGTCTGGGGTGACGATTCACACCGAAGAAGATGCGGTTCGCGCCT
GCATGGCCCTGCACGCGAGGTGTTGGGGGACGAGGGAAGGTTGTACGTGC
CCGCGGAGAACGCGAGCATTTACCGTGAGGAGGTGCTGCCACTTGCGACG
ATGATCACGCCGAACCAATACGAGGCGGAGCTGCTGTCTGGGGTGACGAT
TCACACCGAAGAAGATGCGGTTCGCGCCTGCATGGCCCTGCACGCGAGGG
GACCAGAGACGGTAGTGATCACCAGCAGCCGACTTGGCGGCGGCGCAATT
GGGGCGACGGGGAGAGTAGCAGGGGCCAACGGAGACAGGGACGACGGGAC
CAGAGACGGTAGTGATCACCAGCAGCCGACTTGGCGGCGGCGCAATTGGG
GCGACGGGGAGAGTAGCAGGGGCCAACGGAGACAGGGACGAC
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