mRNA_D-herbacea_F_contig104.455.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: D7G169_ECTSI (Pyridoxal kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G169_ECTSI) HSP 1 Score: 116 bits (290), Expect = 4.610e-27 Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 2
Query: 68 FTGTGDLAAALLLAWTHRLPGNLAGALERVAGSVRAVLTRTHHQGSTELLLVQSKADIERPPLDIRATTV 277
FTGTGDLAAALLLAWT RLPG+LAGALERVAG++RAVL RTH QGS ELLLVQSK DIERPPL++RAT +
Sbjct: 388 FTGTGDLAAALLLAWTRRLPGDLAGALERVAGTMRAVLRRTHAQGSGELLLVQSKEDIERPPLELRATVI 457
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: A0A7S0E9U4_9EUKA (Pyridoxal kinase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E9U4_9EUKA) HSP 1 Score: 86.3 bits (212), Expect = 1.520e-18 Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 2
Query: 2 ADPGSDEG-FDVYRMTFPRLPQQFTGTGDLAAALLLAWTHRLPG--NLAGALERVAGSVRAVLTRTHHQGSTELLLVQSKADIERPPLDIRA 268
A D+G +R+ PRL Q FTGTGDL AALLLAW+ RLPG NL LE+ +V+AVL RTH G EL LVQS+A++ P + +RA
Sbjct: 11 ASTRDDDGVLKQWRLRLPRLDQDFTGTGDLVAALLLAWSDRLPGAVNLPLVLEKAGATVQAVLQRTHASGRRELCLVQSQAELLEPQVRVRA 102
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: K8Z7D1_NANGC (Pyridoxal kinase (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z7D1_NANGC) HSP 1 Score: 76.3 bits (186), Expect = 9.840e-13 Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 2
Query: 29 DVYRMTFPRLPQQFTGTGDLAAALLLAWTHR-LPGNLAGALERVAGSVRAVLTRTHHQG--STELLLVQSKADIERPPLDIRA 268
D+ R+ PR+ +TGTGDL AALLLAW +R P L LE+ +V+A+L RT+ +G S EL LVQSK DIERP + + A
Sbjct: 291 DMCRLVVPRIAGAYTGTGDLTAALLLAWLYRDPPRGLPEVLEKAIATVQAILKRTYEEGGGSAELRLVQSKQDIERPRVQVTA 373
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: A0A4D9CWW5_9STRA (Pyridoxal kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWW5_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.280e-12 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 2
Query: 29 DVYRMTFPRLPQQFTGTGDLAAALLLAWTHR-LPGNLAGALERVAGSVRAVLTRTHHQGS--TELLLVQSKADIERPPLDIRA 268
D+ R+ PR+ +TGTGDL AALLLAW +R P L LE+ +V+A+L RT+ +G EL LVQSK DIERP +++ A
Sbjct: 211 DMCRLVVPRIAGAYTGTGDLTAALLLAWLYRDPPRGLPEVLEKAVATVQAILKRTYEEGGGDAELRLVQSKQDIERPRVEVTA 293
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: A0A024URU2_9STRA (Pyridoxal kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URU2_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.600e-12 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 2
Query: 29 DVYRMTFPRLPQQFTGTGDLAAALLLAWTHRLPGNLAGALERVAGSVRAVLTRTHHQGST--ELLLVQSKADIERPPLDIRATTVVTGH*HAVFVVVVADVMALLPYHTYHSSSIIDTLKCVFYCNIY 406
++Y+M PRLP ++GTGDL AALLLAW + P NL LE V +V+AV+ RT+ S EL L+QS+ DIE P + ++A + H ++ D L+P SSS++ L + + + +
Sbjct: 218 NMYKMEVPRLPAYYSGTGDLFAALLLAWLAKHPTNLKLVLETVVATVQAVMRRTNDAQSANRELKLIQSRRDIESPTIVLKAQLLAGPITHVIW-----DARHLVP----PSSSLLGALDMLAFSHCF 336
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: A0A7S4ES26_CHRCT (Pyridoxal kinase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ES26_CHRCT) HSP 1 Score: 72.0 bits (175), Expect = 1.730e-12 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 2
Query: 50 PRLPQQFTGTGDLAAALLLAWTHRLPG--NLAGALERVAGSVRAVLTRTHHQGSTELLLVQSKADIERPPLDIRA 268
PR+P +TGTGDL +ALLLAW RLP +A LE+V +++AVLTRT +E+ LVQS+ I P + IRA
Sbjct: 82 PRIPHDYTGTGDLTSALLLAWLRRLPEVEQMALVLEKVGATLQAVLTRTLQMDRSEICLVQSREQILEPTVTIRA 156
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: A0A024UU18_9STRA (Pyridoxal kinase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU18_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.750e-12 Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 2
Query: 29 DVYRMTFPRLPQQFTGTGDLAAALLLAWTHRLPGNLAGALERVAGSVRAVLTRTHHQGST--ELLLVQSKADIERPPLDIRA 268
++Y+M PRLP ++GTGDL AALLLAW + P NL LE V +V+AV+ RT+ S EL L+QS+ DIE P + ++A
Sbjct: 218 NMYKMEVPRLPAYYSGTGDLFAALLLAWLAKHPTNLKLVLETVVATVQAVMRRTNDAQSANRELKLIQSRRDIESPTIVLKA 299
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: A0A7S1VZ37_9STRA (Pyridoxal kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VZ37_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 6.180e-12 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 2
Query: 17 DEGFDVYRMTFPRLPQQFTGTGDLAAALLLAWTHRLPGNLAGALERVAGSVRAVLTRTHHQG-----STELLLVQSKADIERPPLDIRA 268
+ G +V+ + P L QFTGTGDL AALLL W+ + G+L +E+V G++ +V+ RT S EL LVQSK DIERPP+ +A
Sbjct: 230 NSGNEVWCINSPILSGQFTGTGDLFAALLLGWSTKDSGDLPSTMEKVVGTMYSVIKRTAESSGDTVASRELKLVQSKEDIERPPMLFKA 318
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: A0A485KG95_9STRA (Pyridoxal kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG95_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.410e-11 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 2
Query: 35 YRMTFPRLPQQFTGTGDLAAALLLAWTHRLPGNLAGALERVAGSVRAVLTRTHHQGST--ELLLVQSKADIERPPLDIR 265
Y+M PRL ++GTGDL AALLLAW + P NL LE + +++AV+ RT+ S EL LVQS+ DIE P + IR
Sbjct: 271 YKMEIPRLQAYYSGTGDLFAALLLAWLTKYPYNLKHVLENIVATIQAVMKRTNDAQSANRELRLVQSRRDIESPTIAIR 349
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Match: A0A1S3KHS9_LINUN (Pyridoxal kinase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KHS9_LINUN) HSP 1 Score: 71.2 bits (173), Expect = 2.640e-11 Identity = 42/91 (46.15%), Postives = 52/91 (57.14%), Query Frame = 2
Query: 38 RMTFPRLPQQFTGTGDLAAALLLAWTHRLPGNLAGALERVAGSVRAVLTRT-----------HHQ--GSTELLLVQSKADIERPPLDIRAT 271
R+ P+LP FTGTGDL AALLLAW + GNL A E+ +++ +L RT +H G EL L+QSK DIE P L I AT
Sbjct: 211 RLEIPKLPANFTGTGDLFAALLLAWMDKHAGNLKLACEKTISTIQVILKRTLKVAQELAGPGNHPSPGQLELRLIQSKRDIENPELCIEAT 301 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig104.455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig104.455.1 >prot_D-herbacea_F_contig104.455.1 ID=prot_D-herbacea_F_contig104.455.1|Name=mRNA_D-herbacea_F_contig104.455.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=84bp MTFPRLPQQFTGTGDLAAALLLAWTHRLPGNLAGALERVAGSVRAVLTRTback to top mRNA from alignment at D-herbacea_F_contig104:203219..206593- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig104.455.1 ID=mRNA_D-herbacea_F_contig104.455.1|Name=mRNA_D-herbacea_F_contig104.455.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3375bp|location=Sequence derived from alignment at D-herbacea_F_contig104:203219..206593- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig104:203219..206593- >mRNA_D-herbacea_F_contig104.455.1 ID=mRNA_D-herbacea_F_contig104.455.1|Name=mRNA_D-herbacea_F_contig104.455.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=504bp|location=Sequence derived from alignment at D-herbacea_F_contig104:203219..206593- (Desmarestia herbacea DmunF female)back to top |