mRNA_D-herbacea_F_contig1028.382.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: A0A2R4QQ51_9PHAE (Uncharacterized protein n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ51_9PHAE) HSP 1 Score: 210 bits (534), Expect = 3.290e-68 Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFKVKLLHNKT 357
MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL IIMIMYSKLQDLKEDILDLSSKM+CIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFK KLLHNKT
Sbjct: 2 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPLYLMPPKQCIGCPIIMIMYSKLQDLKEDILDLSSKMDCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFKFKLLHNKT 132
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: E6ZER5_ECTSI (Conserved hypothetical mitochondrial protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZER5_ECTSI) HSP 1 Score: 115 bits (287), Expect = 1.140e-30 Identity = 62/125 (49.60%), Postives = 92/125 (73.60%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFKVK 339
M+TPRK++LRKKR F+ ++TFA+FNASNLKTSKI +I+L K+ KLYF+PL +I+I+Y++L+D++++I ++SK++CIGVSI+ KWY K FE +KNL K L+L L ++K
Sbjct: 1 MFTPRKRHLRKKRFFLSKQKTFALFNASNLKTSKITEIRLFLKNAKLYFIPLYLNPPKLGLGYPLIIIIYNELKDMQKNIPIIASKVDCIGVSIEKKWYPIKNFENTNLKNLDKKILSLFLLQIK 125
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: A0A5K1KEM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A5K1KEM9_ECTSI) HSP 1 Score: 112 bits (281), Expect = 9.290e-30 Identity = 60/124 (48.39%), Postives = 90/124 (72.58%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFKV 336
M+TPRK++LRKKR F+ ++TFA+FNASNLKTSKI +I+L K+ KLYF+PL +I+++Y+KL++++++I ++SK++CIGVSI+ KWY K FE +K L K L LLL ++
Sbjct: 1 MFTPRKRHLRKKRFFLSKQKTFALFNASNLKTSKITEIRLSLKNAKLYFIPLYLNPPKLGTGYPLIIVIYNKLENMQKNIPTIASKIDCIGVSIEKKWYPIKIFENNNLKKLDKKILGLLLLQI 124
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: F8UWL7_9PHAE (Uncharacterized protein ORF130 n=19 Tax=Saccharina TaxID=309357 RepID=F8UWL7_9PHAE) HSP 1 Score: 110 bits (275), Expect = 8.000e-29 Identity = 59/123 (47.97%), Postives = 87/123 (70.73%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFK 333
M+TPRK++LRKKR F+ ++TFA+FN SNLK+S+I KI++ K+ KLY VPL I+MI+Y LQDL++++ +++SK++C+G+SI KWYS K+ EK + L K L+LLL K
Sbjct: 1 MFTPRKRHLRKKRFFLPEQRTFALFNGSNLKSSQISKIRVSLKNAKLYSVPLYLNPPKLGIGCPIVMIIYETLQDLQDNVPEIASKLDCLGISIDKKWYSIKFLEKSNTETLKKKALSLLLIK 123
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: A0A0G2RKW4_TUROR (Uncharacterized protein n=1 Tax=Turbinaria ornata TaxID=86657 RepID=A0A0G2RKW4_TUROR) HSP 1 Score: 109 bits (273), Expect = 1.560e-28 Identity = 60/121 (49.59%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLL 327
M T RKKYLRKKR F+ + TF +FNASNLKTSKI+K+K G++YFVPL +++ +Y L+D++ +I D++++++C+GVSI+ KWYS KY +K KI L KTLALLL
Sbjct: 1 MSTARKKYLRKKRLFLSKQVTFVLFNASNLKTSKIKKVKTSLIGGRIYFVPLYLTPPKIAVGCPVLIAVYDSLKDMQNNIADITAQIDCLGVSIEKKWYSIKYLKKSKILGLEKKTLALLL 121
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: D0IPU2_SACAN (Uncharacterized protein ORF130 n=6 Tax=Laminariaceae TaxID=33636 RepID=D0IPU2_SACAN) HSP 1 Score: 108 bits (271), Expect = 3.230e-28 Identity = 59/123 (47.97%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFK 333
M+TPRK++LRKKR F+ ++TFA+FN SNLK+S+I KI++ ++ KLY VPL IIMI+Y LQDL++++ +++SK++C+G+SI KWYS K+ EK L K L+LLL K
Sbjct: 1 MFTPRKRHLRKKRFFLPEQRTFALFNGSNLKSSQISKIRISLQNAKLYSVPLYLNPPKLGIGCPIIMIIYETLQDLQDNVPEIASKLDCLGISIDKKWYSIKFLEKSNTATLKKKALSLLLIK 123
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: Q2TUF9_9PHAE (Uncharacterized protein orf143 n=1 Tax=Desmarestia viridis TaxID=62313 RepID=Q2TUF9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 3.300e-28 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLF---KVKLLHNKT 357
M+TPRK++LRKKR F+ N+QTFA+ N SNLK SK+ KIKL K+GKLY VPL +IM++Y +++L+++I +S +++C+G+SI KWY + E K NL KTLALLL K+K+ +N +
Sbjct: 1 MFTPRKRHLRKKRFFLPNQQTFALLNGSNLKASKLSKIKLSLKNGKLYSVPLYLSPPKIGAGCPLIMVVYENVEELQKNIAKISVEIDCLGISIDKKWYPINFLENGKTNNLYQKTLALLLVQSSKIKITYNSS 134
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: A0A8F0K1C4_9PHAE (Uncharacterized protein n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0K1C4_9PHAE) HSP 1 Score: 108 bits (269), Expect = 8.380e-28 Identity = 60/130 (46.15%), Postives = 88/130 (67.69%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFKVKLLHNK 354
M+TPRK++LRKKR F+ ++TFA+FN SNLKTS+I KI+LL ++ KLYFVPL +IMI+Y + DL+ +I ++ +++C+G+SI+ KWY +K K L+ KTL+LLL K + NK
Sbjct: 1 MFTPRKRHLRKKRFFLPKQRTFALFNGSNLKTSQISKIRLLLQNAKLYFVPLYLNPPKQSLGCPLIMIIYETMHDLQTNIPKIALQLDCLGISIERKWYPFNLLKKSNSKTLNKKTLSLLLIKYNTIKNK 130
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: A0A068LGL3_9PHAE (Uncharacterized protein n=2 Tax=Sargassum horneri TaxID=74089 RepID=A0A068LGL3_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.270e-27 Identity = 56/124 (45.16%), Postives = 87/124 (70.16%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLLFKV 336
M T RKK+LRKKR F+ ++ FA+ NASNLKTSKI+KIK+ + G+++FVPL +++++Y L+D++ +I +++ +NC+G+SI+ KWYS KY ++ KI L +TLALLL K+
Sbjct: 1 MPTTRKKHLRKKRLFISKQENFALLNASNLKTSKIKKIKMSLRGGRIFFVPLYLAPPKIATGCPVLILVYDNLKDMRNNIANIARLVNCLGISIEKKWYSIKYLKESKILGLEKRTLALLLLKL 124
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Match: A0A8F0FC24_AKKLU (Uncharacterized protein n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0FC24_AKKLU) HSP 1 Score: 107 bits (267), Expect = 1.270e-27 Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 1 MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPL------------IIMIMYSKLQDLKEDILDLSSKMNCIGVSIQNKWYSTKYFEKKKIKNLSIKTLALLL 327
M TPRK++LRKKR F+ + TFA+FNASNLK SK+ KI+L +GKLY VPL +IMI+Y L+DL++++ + +S+++C+GVSI+ KWYS+ +FE + NL KTL LLL
Sbjct: 1 MSTPRKRHLRKKRFFLPKQHTFALFNASNLKASKVAKIRLSLTNGKLYSVPLYLTPPKLGAGCPLIMIIYDTLEDLQKNLTETASQIDCLGVSIEKKWYSSDFFEGGRTTNLEKKTLGLLL 121 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1028.382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1028.382.1 >prot_D-herbacea_F_contig1028.382.1 ID=prot_D-herbacea_F_contig1028.382.1|Name=mRNA_D-herbacea_F_contig1028.382.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=120bp MYTPRKKYLRKKRAFVYNEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVback to top mRNA from alignment at D-herbacea_F_contig1028:79870..80229+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1028.382.1 ID=mRNA_D-herbacea_F_contig1028.382.1|Name=mRNA_D-herbacea_F_contig1028.382.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=360bp|location=Sequence derived from alignment at D-herbacea_F_contig1028:79870..80229+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1028:79870..80229+ >mRNA_D-herbacea_F_contig1028.382.1 ID=mRNA_D-herbacea_F_contig1028.382.1|Name=mRNA_D-herbacea_F_contig1028.382.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=720bp|location=Sequence derived from alignment at D-herbacea_F_contig1028:79870..80229+ (Desmarestia herbacea DmunF female)back to top |