mRNA_D-herbacea_F_contig1028.380.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig1028.380.1
Unique NamemRNA_D-herbacea_F_contig1028.380.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: A0A2R4QQ86_9PHAE (Ribosomal protein S3 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ86_9PHAE)

HSP 1 Score: 533 bits (1372), Expect = 4.380e-191
Identity = 270/273 (98.90%), Postives = 271/273 (99.27%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWICN 819
            MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLI LVV+NKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYK IQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWICN
Sbjct:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLICLVVKNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKKIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWICN 273          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: A0A1L2F1J7_9PHAE (Ribosomal protein S3 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1J7_9PHAE)

HSP 1 Score: 435 bits (1119), Expect = 2.080e-152
Identity = 212/272 (77.94%), Postives = 242/272 (88.97%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWIC 816
            MAQKA+P  LRP N+FYQ Y+HW+EPRFYYILSTI+  I+SCCLGTTHY++DI +N+ +GS+II +N IHLHT+SKRR+KSRRYKENKL IKKQSWT+VA RLQ A KLIQ FTGTKKV ++VNRLKTYTRAVPK AR+QIAYY K+FHNLKYDYARYGIQL+SL+++ KAN  SLCRFIEQNVCSRQKRKRHYEFLRYLKQ F +LQKYK + GLKIQIKGRFTHKAKGRSR WKYQIGQMPLS+L++ I+A YKQTQTGYG VGLKIW C
Sbjct:    1 MAQKAHPTALRPKNTFYQGYTHWNEPRFYYILSTIHNFIQSCCLGTTHYLDDIQINRHIGSIIIAINLIHLHTKSKRRIKSRRYKENKLKIKKQSWTLVACRLQAATKLIQMFTGTKKVILKVNRLKTYTRAVPKPARRQIAYYAKSFHNLKYDYARYGIQLMSLLLKKKANTTSLCRFIEQNVCSRQKRKRHYEFLRYLKQGFDSLQKYKKLNGLKIQIKGRFTHKAKGRSRTWKYQIGQMPLSRLNATIKAEYKQTQTGYGSVGLKIWTC 272          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: A0A0G2RL18_TUROR (Ribosomal protein S3 n=1 Tax=Turbinaria ornata TaxID=86657 RepID=A0A0G2RL18_TUROR)

HSP 1 Score: 422 bits (1086), Expect = 2.200e-147
Identity = 204/272 (75.00%), Postives = 238/272 (87.50%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWIC 816
            MAQKA+P TLRP N+FY  ++HW+ PRFYYILS I+  I+SCCLGTTHY+N+I +NK +GS+II ++ IHLHTRSK+R+KSRRYKENKL IKK+SWT+VA RLQ A KLIQ FTGTKKV ++VNRLKTYTR+VPK  R+QIAYYTK+FHN KYDYARYGIQL+SLV++NKAN D LCRFIEQN+CSRQKRKRHYEFLRYLKQ   +LQKYK I GLK+QIKGRFTHKAKGRSR WKYQIGQMPLS+L++ I A Y+QTQTGYG VGLK+W C
Sbjct:    1 MAQKAHPTTLRPKNTFYLGHTHWNNPRFYYILSRIHNFIQSCCLGTTHYLNNIKINKHMGSIIITIDLIHLHTRSKKRIKSRRYKENKLKIKKKSWTLVASRLQTATKLIQAFTGTKKVILKVNRLKTYTRSVPKPTRRQIAYYTKSFHNFKYDYARYGIQLMSLVLKNKANTDCLCRFIEQNICSRQKRKRHYEFLRYLKQGLHSLQKYKKINGLKLQIKGRFTHKAKGRSRTWKYQIGQMPLSQLNTAIAAEYRQTQTGYGSVGLKVWTC 272          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: A0A1S5QKP2_9PHAE (Ribosomal protein S3 n=6 Tax=Sargassaceae TaxID=3014 RepID=A0A1S5QKP2_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 6.970e-144
Identity = 202/272 (74.26%), Postives = 232/272 (85.29%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWIC 816
            MAQKA+P TLRP N+FYQ Y+HW+EPRFYYILS I   +ESCCLGTTHY++DI +N+   +VII ++ IHLH RSK+R+KSRRYKENKL IKK+SWT++A RLQ A KLIQ FTG KK  I+VNRLK YTR+VPK  R++IAYYTK+FHNLKYDYARYGIQL+SL+++NKAN   LCRFIEQNVCSRQKRKRHYEFLRYLKQ   +LQKYK I GLKIQIKGRFTHKAKGRSR WKYQIGQMPLS+L++ I A YKQTQTGYG VGLK W C
Sbjct:    1 MAQKAHPTTLRPQNTFYQGYTHWNEPRFYYILSRIRHFMESCCLGTTHYLHDIQINRHTAAVIITIDLIHLHIRSKKRIKSRRYKENKLKIKKKSWTLIASRLQAAAKLIQVFTGAKKTIIKVNRLKMYTRSVPKPVRREIAYYTKSFHNLKYDYARYGIQLMSLIIKNKANITCLCRFIEQNVCSRQKRKRHYEFLRYLKQGLHSLQKYKKINGLKIQIKGRFTHKAKGRSRTWKYQIGQMPLSRLNTTITAEYKQTQTGYGSVGLKAWTC 272          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: A0A068LGB9_9PHAE (Ribosomal protein S3 n=5 Tax=Sargassum horneri TaxID=74089 RepID=A0A068LGB9_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 2.830e-143
Identity = 204/270 (75.56%), Postives = 231/270 (85.56%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIW 810
            MAQKANPITLRP N+FYQ Y+HW+EPRFYY+LS +  LIESCCL TTHY+ +I +NK   + II V+ IH HTRSKRR+KSRRYKENKL IKK SWT++A RLQ A KLIQ FTGTKK+ ++VNRLKTYTR+VPK  R++IAYYTK+FHN KYDYARYGIQL+SL+++NKA+   LCRFIEQNVCSRQKRKRHYEFLRYLKQ  Q+LQKYK I GLKIQIKGRFTHKAKGRSR WKYQIGQMPLS+L S I A YKQTQTGYG VGLK W
Sbjct:    1 MAQKANPITLRPHNTFYQGYTHWNEPRFYYMLSRVRHLIESCCLDTTHYLRNIQINKHAVATIITVDLIHTHTRSKRRIKSRRYKENKLRIKKNSWTLIASRLQAATKLIQIFTGTKKIILQVNRLKTYTRSVPKSVRREIAYYTKSFHNSKYDYARYGIQLMSLILKNKADTSCLCRFIEQNVCSRQKRKRHYEFLRYLKQGLQSLQKYKKINGLKIQIKGRFTHKAKGRSRTWKYQIGQMPLSRLDSIINAEYKQTQTGYGSVGLKAW 270          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: A0A4D6E526_9PHAE (Ribosomal protein S3 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E526_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 3.520e-142
Identity = 199/273 (72.89%), Postives = 240/273 (87.91%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWICN 819
            MAQKA+P  LRP N+ YQ  +HWDEPRFY+IL+TI KLIESC LGTTHY++ I +N+ LG + I++N IHLH RSKRRLKSRRYKENK+  KKQSWTIVA RLQ AI+LIQ FTGTKKVT+RVNRLKTYTR+VPK AR+Q+AY+TK+F+++KYDYARYGIQL+ L+++NKAN  SL RF+ QN+CSRQ+RKRHY+FL Y+KQ FQ+LQ+YK IQGLKIQIKGRFTHKAKGRSR+WKYQ+GQMP+S+L+  I+A Y+QTQTGYG VGLKIWICN
Sbjct:    1 MAQKAHPTILRPRNNLYQGCTHWDEPRFYFILTTIKKLIESCFLGTTHYLDKIKINRHLGLIFIEINIIHLHFRSKRRLKSRRYKENKIINKKQSWTIVACRLQTAIELIQKFTGTKKVTLRVNRLKTYTRSVPKPARRQMAYFTKSFNHIKYDYARYGIQLMYLLIKNKANTSSLTRFLIQNICSRQRRKRHYQFLAYIKQGFQSLQEYKKIQGLKIQIKGRFTHKAKGRSRIWKYQMGQMPISQLNKTIKAEYEQTQTGYGSVGLKIWICN 273          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: W5RGE7_COSCS (Ribosomal protein S3 n=50 Tax=Phaeophyceae TaxID=2870 RepID=W5RGE7_COSCS)

HSP 1 Score: 409 bits (1050), Expect = 7.390e-142
Identity = 198/273 (72.53%), Postives = 240/273 (87.91%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWICN 819
            MAQKA+P  LRP N+ YQ  +HWDEPRFY+ILSTI KL+ESCCLGTTHY++ I VN+ LG ++I+ N IHLH RSKRRLKSRRYKEN++  KKQSWT+VA RLQ A+KLIQ FTGTKKVT+R+NRLKTYTR+VPK AR+Q+AY+TK+F++++YDYARYG+QL+ L+++ KA+A SL RF+ QN+CSRQ+RKRHY+FL Y+KQ FQALQ+YK IQGLKIQIKGRFTHKAKGRSRVWKYQ+GQMP+S+L+  IQA Y QTQTGYG VGLKIWICN
Sbjct:    1 MAQKAHPTILRPGNNLYQGCTHWDEPRFYFILSTIKKLMESCCLGTTHYLDKIQVNRHLGLILIEANLIHLHFRSKRRLKSRRYKENQVKSKKQSWTVVACRLQSALKLIQKFTGTKKVTLRINRLKTYTRSVPKPARRQMAYFTKSFNHIRYDYARYGMQLMYLLIKKKASAASLTRFLTQNICSRQRRKRHYQFLAYIKQGFQALQQYKEIQGLKIQIKGRFTHKAKGRSRVWKYQMGQMPISQLNKSIQADYAQTQTGYGSVGLKIWICN 273          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: A0A0U1WNM7_SARFS (Ribosomal protein S3 n=12 Tax=Sargassum TaxID=3015 RepID=A0A0U1WNM7_SARFS)

HSP 1 Score: 406 bits (1043), Expect = 9.220e-141
Identity = 202/272 (74.26%), Postives = 229/272 (84.19%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWIC 816
            MAQKA+P TLRP N+FYQ Y+HW+EPRFYYILS I   IESCCLGTTHY++ I +NK     II V+ IHLH RSKRR+KSRRYKENKL  KK+SWT+VA RLQ A KLIQ FTGTKK+ ++VNRLKTY R+VPK  R++IAYYTK+FHN KYDYARYGIQL+SL+++NKAN   LCRFIEQNVCSRQKRKRHYEFLRYLKQ  Q+LQ++K I GLKIQIKGRFTHKAKGRSR WK QIGQMPLSKL++ I A YKQTQTGYG VGLK W C
Sbjct:    1 MAQKAHPTTLRPQNTFYQGYTHWNEPRFYYILSKIRYFIESCCLGTTHYLHGIQINKHAAVTIIAVDLIHLHMRSKRRIKSRRYKENKLKTKKKSWTLVASRLQTATKLIQVFTGTKKIILKVNRLKTYIRSVPKPVRREIAYYTKSFHNSKYDYARYGIQLMSLILKNKANIACLCRFIEQNVCSRQKRKRHYEFLRYLKQGLQSLQRHKKINGLKIQIKGRFTHKAKGRSRTWKCQIGQMPLSKLNATINAEYKQTQTGYGSVGLKAWTC 272          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: A0A8F0FD58_9PHAE (Ribosomal protein S3 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0FD58_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 4.760e-140
Identity = 193/273 (70.70%), Postives = 242/273 (88.64%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWICN 819
            MAQKA+P  LRPT   YQ  +HWDE RFYYI+STI+KL+ESCCLGTTHY++ I +N+ LG V+I+ + IHLH RSKRRL+SRRYKENKL IKKQSWT+VA RL  A++LIQ FTGTKKVT+++NRLK YTR+VPK AR+Q+AY+ K+F++++YDYARYG+QL+ L+V+NKA+A SL RF++QN+CSRQ+RKRHY+FL YLKQ FQALQ+Y++IQGLKIQIKGRFTHKAKGRSRVWKYQ+GQMP+S+L+  IQA+Y+QTQTGYG VG+K+WICN
Sbjct:    1 MAQKAHPTILRPTGGIYQGCTHWDEARFYYIVSTIHKLLESCCLGTTHYLDKIQINRHLGLVLIEADLIHLHFRSKRRLRSRRYKENKLKIKKQSWTLVACRLHSAVQLIQKFTGTKKVTLKINRLKAYTRSVPKPARRQMAYFAKSFNHIRYDYARYGMQLMYLLVRNKASALSLSRFLKQNICSRQRRKRHYQFLGYLKQGFQALQEYRSIQGLKIQIKGRFTHKAKGRSRVWKYQMGQMPISQLNKTIQAKYEQTQTGYGSVGIKVWICN 273          
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Match: Q2TUF7_9PHAE (Ribosomal protein S3 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUF7_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 1.020e-137
Identity = 195/273 (71.43%), Postives = 237/273 (86.81%), Query Frame = 1
Query:    1 MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYINDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVAYRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHNLKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYLKQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSKIQARYKQTQTGYGGVGLKIWICN 819
            MAQKA+P ++RP +S YQ  +HWDE RFYYILST++KLIESCCLGTTHY++ I +N+  G ++++ N IH+H+RSKR LKSRRYKENK  IKK+SWT+VA RL +A++LIQNFTGTKKVTIR+NRLKTYTR++PK ARKQ+AYY ++ H  KYDYAR G+QL+SLV++NKA+A SL RFI QN+ SRQ+RKRHYEFL YLKQ+F ALQKYK IQG+KIQIKGRFTHKAKGRS+VWKYQ+GQMPLS++S  IQA Y QTQTGYG VGLK+WICN
Sbjct:    1 MAQKAHPNSIRPLDSPYQGCTHWDEARFYYILSTVHKLIESCCLGTTHYLDKIKINRQHGLILVEANLIHVHSRSKRHLKSRRYKENKGEIKKESWTLVACRLHRAVELIQNFTGTKKVTIRINRLKTYTRSIPKSARKQMAYYARSAHQAKYDYARTGMQLLSLVIKNKASATSLSRFIIQNISSRQRRKRHYEFLGYLKQAFTALQKYKKIQGVKIQIKGRFTHKAKGRSKVWKYQMGQMPLSQISMPIQAEYMQTQTGYGSVGLKVWICN 273          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1028.380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ86_9PHAE4.380e-19198.90Ribosomal protein S3 n=3 Tax=Fucus TaxID=3011 RepI... [more]
A0A1L2F1J7_9PHAE2.080e-15277.94Ribosomal protein S3 n=1 Tax=Coccophora langsdorfi... [more]
A0A0G2RL18_TUROR2.200e-14775.00Ribosomal protein S3 n=1 Tax=Turbinaria ornata Tax... [more]
A0A1S5QKP2_9PHAE6.970e-14474.26Ribosomal protein S3 n=6 Tax=Sargassaceae TaxID=30... [more]
A0A068LGB9_9PHAE2.830e-14375.56Ribosomal protein S3 n=5 Tax=Sargassum horneri Tax... [more]
A0A4D6E526_9PHAE3.520e-14272.89Ribosomal protein S3 n=2 Tax=Laminariaceae TaxID=3... [more]
W5RGE7_COSCS7.390e-14272.53Ribosomal protein S3 n=50 Tax=Phaeophyceae TaxID=2... [more]
A0A0U1WNM7_SARFS9.220e-14174.26Ribosomal protein S3 n=12 Tax=Sargassum TaxID=3015... [more]
A0A8F0FD58_9PHAE4.760e-14070.70Ribosomal protein S3 n=2 Tax=Laminariales TaxID=28... [more]
Q2TUF7_9PHAE1.020e-13771.43Ribosomal protein S3 n=2 Tax=Desmarestia TaxID=313... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1028contigD-herbacea_F_contig1028:78629..79450 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size822
Cds size822
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927436.7873952-CDS-D-herbacea_F_contig1028:78628..794501622927436.7873952-CDS-D-herbacea_F_contig1028:78628..79450Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1028 78629..79450 +
1690790170.150316-CDS-D-herbacea_F_contig1028:78628..794501690790170.150316-CDS-D-herbacea_F_contig1028:78628..79450Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig1028 78629..79450 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1028.380.1prot_D-herbacea_F_contig1028.380.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig1028 78629..79450 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig1028.380.1

>prot_D-herbacea_F_contig1028.380.1 ID=prot_D-herbacea_F_contig1028.380.1|Name=mRNA_D-herbacea_F_contig1028.380.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=274bp
MAQKANPITLRPTNSFYQSYSHWDEPRFYYILSTINKLIESCCLGTTHYI
NDITVNKFLGSVIIKVNFIHLHTRSKRRLKSRRYKENKLTIKKQSWTIVA
YRLQKAIKLIQNFTGTKKVTIRVNRLKTYTRAVPKYARKQIAYYTKNFHN
LKYDYARYGIQLISLVVQNKANADSLCRFIEQNVCSRQKRKRHYEFLRYL
KQSFQALQKYKTIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSK
IQARYKQTQTGYGGVGLKIWICN*
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mRNA from alignment at D-herbacea_F_contig1028:78629..79450+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig1028.380.1 ID=mRNA_D-herbacea_F_contig1028.380.1|Name=mRNA_D-herbacea_F_contig1028.380.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=822bp|location=Sequence derived from alignment at D-herbacea_F_contig1028:78629..79450+ (Desmarestia herbacea DmunF female)
ATGGCCCAAAAAGCTAATCCTATTACTTTGCGTCCGACCAACTCTTTTTA TCAAAGTTACAGTCATTGGGACGAACCCAGATTTTATTACATATTATCTA CTATTAATAAACTAATTGAATCATGCTGTTTAGGCACTACACATTATATA AATGATATAACTGTAAATAAATTCTTAGGATCCGTAATTATAAAAGTTAA CTTTATTCACCTGCACACAAGATCAAAACGACGTTTAAAATCAAGACGCT ATAAAGAAAACAAATTAACTATAAAAAAACAATCTTGGACAATAGTAGCC TACAGGCTACAAAAAGCTATTAAATTAATTCAAAATTTCACAGGAACGAA AAAAGTAACAATCAGAGTTAATCGACTAAAAACTTACACTAGAGCTGTTC CAAAATATGCACGAAAACAAATAGCTTACTATACAAAAAATTTTCACAAT TTAAAATATGACTACGCTAGATACGGTATACAATTAATATCCTTGGTAGT CCAAAATAAGGCTAACGCCGATAGCTTATGCAGATTTATTGAACAAAATG TTTGTTCTCGACAAAAACGTAAAAGACATTACGAATTTTTAAGATATTTA AAGCAAAGCTTTCAAGCCCTTCAAAAATATAAAACAATTCAAGGTTTAAA AATTCAAATAAAGGGTAGATTTACCCATAAAGCTAAAGGACGAAGTAGGG TTTGGAAATATCAAATCGGGCAAATGCCACTGAGCAAATTGAGCTCGAAG ATACAAGCGAGATATAAGCAAACCCAAACCGGGTACGGCGGAGTAGGGTT AAAAATTTGGATCTGTAATTAA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig1028:78629..79450+

>mRNA_D-herbacea_F_contig1028.380.1 ID=mRNA_D-herbacea_F_contig1028.380.1|Name=mRNA_D-herbacea_F_contig1028.380.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1644bp|location=Sequence derived from alignment at D-herbacea_F_contig1028:78629..79450+ (Desmarestia herbacea DmunF female)
ATGGCCCAAAAAGCTAATCCTATTACTTTGCGTCCGACCAACTCTTTTTA
TCAAAGTTACAGTCATTGGGACGAACCCAGATTTTATTACATATTATCTA
CTATTAATAAACTAATTGAATCATGCTGTTTAGGCACTACACATTATATA
AATGATATAACTGTAAATAAATTCTTAGGATCCGTAATTATAAAAGTTAA
CTTTATTCACCTGCACACAAGATCAAAACGACGTTTAAAATCAAGACGCT
ATAAAGAAAACAAATTAACTATAAAAAAACAATCTTGGACAATAGTAGCC
TACAGGCTACAAAAAGCTATTAAATTAATTCAAAATTTCACAGGAACGAA
AAAAGTAACAATCAGAGTTAATCGACTAAAAACTTACACTAGAGCTGTTC
CAAAATATGCACGAAAACAAATAGCTTACTATACAAAAAATTTTCACAAT
TTAAAATATGACTACGCTAGATACGGTATACAATTAATATCCTTGGTAGT
CCAAAATAAGGCTAACGCCGATAGCTTATGCAGATTTATTGAACAAAATG
TTTGTTCTCGACAAAAACGTAAAAGACATTACGAATTTTTAAGATATTTA
AAGCAAAGCTTTCAAGCCCTTCAAAAATATAAAACAATTCAAGGTTTAAA
AATTCAAATAAAGGGTAGATTTACCCATAAAGCTAAAGGACGAAGTAGGG
TTTGGAAATATCAAATCGGGCAAATGCCACTGAGCAAATTGAGCTCGAAG
ATACAAGCGAGATATAAGCAAACCCAAACCGGGTACGGCGGAGTAGGGTT
AAAAATTTGGATCTGTAATTAAATGGCCCAAAAAGCTAATCCTATTACTT
TGCGTCCGACCAACTCTTTTTATCAAAGTTACAGTCATTGGGACGAACCC
AGATTTTATTACATATTATCTACTATTAATAAACTAATTGAATCATGCTG
TTTAGGCACTACACATTATATAAATGATATAACTGTAAATAAATTCTTAG
GATCCGTAATTATAAAAGTTAACTTTATTCACCTGCACACAAGATCAAAA
CGACGTTTAAAATCAAGACGCTATAAAGAAAACAAATTAACTATAAAAAA
ACAATCTTGGACAATAGTAGCCTACAGGCTACAAAAAGCTATTAAATTAA
TTCAAAATTTCACAGGAACGAAAAAAGTAACAATCAGAGTTAATCGACTA
AAAACTTACACTAGAGCTGTTCCAAAATATGCACGAAAACAAATAGCTTA
CTATACAAAAAATTTTCACAATTTAAAATATGACTACGCTAGATACGGTA
TACAATTAATATCCTTGGTAGTCCAAAATAAGGCTAACGCCGATAGCTTA
TGCAGATTTATTGAACAAAATGTTTGTTCTCGACAAAAACGTAAAAGACA
TTACGAATTTTTAAGATATTTAAAGCAAAGCTTTCAAGCCCTTCAAAAAT
ATAAAACAATTCAAGGTTTAAAAATTCAAATAAAGGGTAGATTTACCCAT
AAAGCTAAAGGACGAAGTAGGGTTTGGAAATATCAAATCGGGCAAATGCC
ACTGAGCAAATTGAGCTCGAAGATACAAGCGAGATATAAGCAAACCCAAA
CCGGGTACGGCGGAGTAGGGTTAAAAATTTGGATCTGTAATTAA
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