mRNA_D-herbacea_F_contig1028.376.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: Q2TUJ3_FUCVE (Uncharacterized protein orf379 n=2 Tax=Fucus TaxID=3011 RepID=Q2TUJ3_FUCVE) HSP 1 Score: 538 bits (1386), Expect = 1.120e-189 Identity = 267/300 (89.00%), Postives = 279/300 (93.00%), Query Frame = 2
Query: 245 LSQGLLSILILSFYFFFQENFLMHSRRPNKDIENFVDLYFQRHIRKRFEKDLLCCLVKAVNELVPQSVRRPVILRFQECYLNSVLEGTDSNCLKDLPGIKNLIYIKEFEFGIAEINKKLGIFERLFTIFEKKIYKSFNIYKKSLYIISLGLPISSFAVSGKFSYKGINYVNKKNIFYSNCSLINQKYLINQYSFKLKCFNCLYLLFFKDFQGFYFFWSHSSLDILLKGAFNNKRYKDFDYLFDFALEGLEEFNYRKTKIQAPGHHKSFHTINLKATSISVEVLKDLPTTLNNHFLRYSNK 1144
+ G + + +F FFQENFLMHSRRPNKDIENFVDLYFQRH+RKRFEKDLLCCLVKAVNELVPQSVRRPVILRFQECYLNSVLEGTDS+CLKDLPGIKNLIY KEF GI EINKK GIFERLFTIFEKKIYKSFNIYKKSLYII LGLPI SFAVSGKFSYK INYVNKKNIFY NCSLINQKYLI+QYSFKLKCFNCLYLLFFK FQGFYFFWSHS+LDILLKGA NNKRYKDFDYLFDFALEGLEEFNYRKTKIQAPGH+KS+HTINLK TSISV+VLKDLPTTLNNHFL+YSNK
Sbjct: 82 IKSGFIKHIDFNFLLFFQENFLMHSRRPNKDIENFVDLYFQRHVRKRFEKDLLCCLVKAVNELVPQSVRRPVILRFQECYLNSVLEGTDSDCLKDLPGIKNLIYKKEF--GITEINKKSGIFERLFTIFEKKIYKSFNIYKKSLYIIPLGLPIPSFAVSGKFSYKCINYVNKKNIFYYNCSLINQKYLIHQYSFKLKCFNCLYLLFFKGFQGFYFFWSHSNLDILLKGALNNKRYKDFDYLFDFALEGLEEFNYRKTKIQAPGHYKSYHTINLKVTSISVKVLKDLPTTLNNHFLKYSNK 379
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: A0A8F0FBL2_AKKLU (Uncharacterized protein n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0FBL2_AKKLU) HSP 1 Score: 109 bits (273), Expect = 3.760e-23 Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 1
Query: 1 VGDIKIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFL-LFFSRKFSY 312
+G K +++DL K SCP+FKKY +F+LWS+D EY+ +KYC FY+S YT+ FT+ F+L FS S L +LY SP IKFI+SGF K+IDF FL LF F Y
Sbjct: 1 MGKAKKHSENDLSKYYDSCPIFKKYCQFDLWSEDFCEYDNIKYCEFYISLYTYAFTRRFLLNNFSPSCLAVLYTSPFLIKFIRSGFFKYIDFNFLSLFHDNCFFY 105
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: A0A8F0FC42_9PHAE (Uncharacterized protein n=1 Tax=Ecklonia arborea TaxID=1849970 RepID=A0A8F0FC42_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.200e-22 Identity = 50/101 (49.50%), Postives = 71/101 (70.30%), Query Frame = 1
Query: 10 IKIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFLLFFSRKFSY 312
+K ++++DL+ + PVFKKY ++ LWS++ EY+ +KYC YLSKY F + +IL YFS FLLI Y+SP F+KFIKSGF K+I++ FLL F F +
Sbjct: 4 VKKYSEADLVDFYVGSPVFKKYSQYYLWSENFSEYHTIKYCEIYLSKYIFGCIQKYILEYFSEFFLLIFYNSPTFLKFIKSGFFKYINYHFLLLFQNNFFF 104
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: A0A8F0FC49_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FC49_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.830e-22 Identity = 54/94 (57.45%), Postives = 73/94 (77.66%), Query Frame = 1
Query: 13 KIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFLLFF 294
K +K++L+KL SCP+FKKY +FNLWS++ EY+++KYC YL +Y FT+ +L+ FS SFL +L+ SP F+KFIKSGFIK+IDF FLLFF
Sbjct: 5 KNHSKNELVKLYDSCPIFKKYCQFNLWSEEFGEYDKVKYCETYLYRYISTFTQEHLLQCFSPSFLAVLHTSPSFMKFIKSGFIKYIDFHFLLFF 98
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: A0A8F0K0W1_9PHAE (Uncharacterized protein n=1 Tax=Thalassiophyllum clathrus TaxID=112506 RepID=A0A8F0K0W1_9PHAE) HSP 1 Score: 105 bits (263), Expect = 9.760e-22 Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 13 KIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFLLFF-SRKFSY 312
KI++++DL + PVFKKY + NLWS + +EYN +KYC YLS+Y + +IL YFS SFLL LY+SP F+KFI+SGF K+I+ FLLFF S +F +
Sbjct: 5 KIYSETDLADFYVVSPVFKKYSQLNLWSDNFIEYNNIKYCEIYLSQYFLGCAQKYILEYFSESFLLTLYNSPKFVKFIRSGFFKYINRHFLLFFQSNRFFF 105
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: A0A8F0K048_9PHAE (Uncharacterized protein n=1 Tax=Arthrothamnus bifidus TaxID=169778 RepID=A0A8F0K048_9PHAE) HSP 1 Score: 102 bits (253), Expect = 1.830e-20 Identity = 51/102 (50.00%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 13 KIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFLLFFSRKFSYAF 318
K ++++DL L PVFKKY + +LWS++ EY LKYC YLS+Y F T+ +IL YFS+SFL+IL +SP F+KFIKSGF K+I++ FL+ F + F
Sbjct: 5 KRYSEADLADLYSVSPVFKKYSQLHLWSENFSEYYNLKYCEVYLSQYVFGCTQKYILEYFSKSFLVILQNSPNFLKFIKSGFFKYINYHFLILFQNNCFFCF 106
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: A0A8E8PFW5_ALAES (Uncharacterized protein n=3 Tax=Alaria TaxID=2888 RepID=A0A8E8PFW5_ALAES) HSP 1 Score: 102 bits (254), Expect = 5.780e-20 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 13 KIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFLLFF-SRKFSYA 315
K ++++DL PVFKKY +FNLWS++ EYN +KYC Y SKY F T+ ++L FS SFLL L++SP F+KFIKSGF K+I+F FL+ F S +F +
Sbjct: 5 KRYSETDLADFYSVSPVFKKYSQFNLWSENFSEYNNIKYCEIYFSKYFFGLTQKYLLENFSESFLLTLHNSPKFLKFIKSGFFKYINFHFLVLFQSNRFFFC 106
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: UPI001D0F9E08 (hypothetical protein n=1 Tax=Alaria marginata TaxID=98221 RepID=UPI001D0F9E08) HSP 1 Score: 102 bits (254), Expect = 5.780e-20 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 13 KIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFLLFF-SRKFSYA 315
K ++++DL PVFKKY +FNLWS++ EYN +KYC Y SKY F T+ ++L FS SFLL L++SP F+KFIKSGF K+I+F FL+ F S +F +
Sbjct: 5 KRYSETDLFDFHSVSPVFKKYSQFNLWSENFSEYNNIKYCEIYFSKYFFGLTQKYLLENFSESFLLTLHNSPKFLKFIKSGFFKYINFHFLVLFQSNRFFFG 106
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: A0A8F0FCX5_9PHAE (Uncharacterized protein n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0FCX5_9PHAE) HSP 1 Score: 102 bits (254), Expect = 5.890e-20 Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 10 IKIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFLLFF 294
+K +++DL+K SCP+FKKY +F+LWS+D EY +KYC YLS YT+ F + + +FS S L +LY SP F+KF++SGF K++D+ FLL F
Sbjct: 4 VKKHSENDLVKYYESCPIFKKYCQFDLWSEDFCEYENIKYCETYLSLYTYAFIQRLLFDHFSPSCLAVLYTSPYFVKFVRSGFFKYVDYHFLLSF 98
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Match: A0A8F0FCL0_9PHAE (Uncharacterized protein n=1 Tax=Laminaria ephemera TaxID=309364 RepID=A0A8F0FCL0_9PHAE) HSP 1 Score: 101 bits (251), Expect = 9.210e-20 Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 13 KIFNKSDLIKLCISCPVFKKYYRFNLWSKDCVEYNQLKYCSFYLSKYTFNFTKNFILRYFSRSFLLILYDSPIFIKFIKSGFIKHIDFKFLLFFSRK 303
K ++++DL PVFK+Y +FNLWS++ EY+ +KYC YLS+Y F + L +FS SFLL LY+SP F+KFIKSGF K+ID FLLFF
Sbjct: 5 KRYSETDLADFYTVSPVFKRYSQFNLWSENFSEYHNIKYCEIYLSQYIFGYXXXXXLEHFSESFLLTLYNSPKFLKFIKSGFFKYIDLHFLLFFQNN 101 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1028.376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1028.376.1 >prot_D-herbacea_F_contig1028.376.1 ID=prot_D-herbacea_F_contig1028.376.1|Name=mRNA_D-herbacea_F_contig1028.376.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=279bp MHSRRPNKDIENFVDLYFQRHIRKRFEKDLLCCLVKAVNELVPQSVRRPVback to top mRNA from alignment at D-herbacea_F_contig1028:74612..75758- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1028.376.1 ID=mRNA_D-herbacea_F_contig1028.376.1|Name=mRNA_D-herbacea_F_contig1028.376.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1147bp|location=Sequence derived from alignment at D-herbacea_F_contig1028:74612..75758- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1028:74612..75758- >mRNA_D-herbacea_F_contig1028.376.1 ID=mRNA_D-herbacea_F_contig1028.376.1|Name=mRNA_D-herbacea_F_contig1028.376.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1674bp|location=Sequence derived from alignment at D-herbacea_F_contig1028:74612..75758- (Desmarestia herbacea DmunF female)back to top |