mRNA_D-herbacea_F_contig1023.374.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 461 bits (1186), Expect = 1.400e-137 Identity = 373/1185 (31.48%), Postives = 562/1185 (47.43%), Query Frame = 1
Query: 271 EEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAV--EQWGKPLFCPRRGLFSATGARRIARQETFLEANL--TGNGSVKIASGAALRAAASH----DVMEVHRMLAHPSEAITRKTAAMMGIETTGQWGACETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWMDGPKKTGSD----------------------------GTGSDD----RGKKPAGGDII------------------------------VERGTPQLNVQ----ELGQEQHEHEWQEAISELEG-----------ETQGT------------LSDHGEDTQERCSVSCRRLRRKKKTAWRMCYHMALQATL------------------------------DV-SEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVAR-PKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILN 3417
E+W +D+G FHM+ + A M + K S+ G + + G +E+ + + V + +V Y P L NL S E W L P + + G + L A+ G SV A + H DV E H + AH + + R TA +G E G+ C C KA + + ++T+ R+ K R FVD+GG +S+GG +Y +I DD TR + F+K KSDA A S +A S +E VR+DNGGEF GEF + I E TP +PQYNGVAER LGL+ E A+ I + L + +P+ +KLWA+AM +AC+ N + ++ + KSPYE+W+G+ P PF Y R R K+ PKGE C ++G R+ P VL R+ I E + V W P + G G R P G +++ V P+++V E G + E ET+ + L+D +E V R R + + + L AT+ DV SEP + +A S W A E+ G++ + + P VI + ++K K + GKI K K RLVA+GF Q GV Y E +SPT +AAS R+++A A + EL H+D EQAF+++++D E+++++P V RLNK++YGL QA R + + ++ IGFEQ+ +DPCV R ++ E +V +HVDDIL +A K+ + A LG K++G+ ++++GC R+RK ++ Q Y+ S+++RF++ + + IPA+ L+ D ++ E+E P+RE VG+LMW A+ TR DI+ AVRAVAR P +H KA KI YLL T + + + Y D+DF + RRSVSGA++ +A + W SR Q+ + TSEAEY+A+ + VK+ LF+ + +F+ PS++ ++V EDNEGAI LA N +S R+KHIDV+HH +R+ ++ + V +V S++QHAD+LTK L F H F L
Sbjct: 230 EDWYADTGTAFHMTDSLACMKDLKPCHK--SVNGIGGVSCEISFSGTLEL-VFVTADSEFSVELKNVLYSPNLGYNLFSPSAEFDGESWNG-LGGPDGVMTAFKGQVTFQNFDGMLIASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPSKLLPKGESCFYVGPSRDHPRDCHRVL-TRAGTIQETRDVTWEVLPSQLXXXXXXXXXXXXXXXXXXXXXXXXXEVWPLVGRGVAHTLLKREAVPPGTEVVEVESXXXXXXXXXXXXXXXXXXXXXXXXXSVSSPVPEIDVNSGEIETGDPGGDDEXXXXXXXXXXXXXXXXXXRPVETEASPPTGRRPRHVAELADFNTAARENDEVREGRTRAQTRAVNQQSVP-GLMATIGPISGTEVLYALLSEQRAGDETELPKELVQDVESEPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPAS-----LNNDD--RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHRDFALG 1398
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 454 bits (1167), Expect = 6.570e-136 Identity = 340/1053 (32.29%), Postives = 509/1053 (48.34%), Query Frame = 1
Query: 685 DVMEVHRMLAHPSEAITRKTAAMMGIETTGQWGACETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQW---------------MDGPKKTGSDGTGSDD--------------------RGKKPAG-----------GDIIVERGTPQLNVQELGQEQHEHEWQEAISEL----EGETQG-------TLSDHGEDTQERCSVSCRRL--------------------RRKKKTAWRMCYHMALQATLDVSEPRNRRQAM----------------------------ESHEWDE-----------------------------WRKAEETEMLGMVENCVYDQVAR-PKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVKKFCKHAKFILN 3417
D+ E H + AH E + R TA +G + G AC C KA R + +T++R+ K R FVD+GG +S+GG +Y +I DD TR + F++ KSDA +A + +A S +E VR+DNGGEF GEF + I E TP +PQYNGVAER LGL+ E A+ I + L + +P+ +KLWA+AM +AC+ N + ++ + SPYE+W+G+ P PF Y R R K+ PKGE C ++G R+ P VL R+ I E + V W ++ ++ G D SDD R P+G G + P + + + ++S +GE QG + D G D +E RR + A ++ A + +V E R R Q E DE W A E+ G++ + A+ P VI + ++K K + GKI K K RLVA+GF Q GV Y E +SPT +AAS R+++A A + EL H+D EQAF+++++D E+++++P G V RLNK++YGL QA R + + ++ IGFEQ+ +DPCV R ++ E +V +HVDDIL +A K+ + A LG K++G+ +++GC R+R+ ++ Q Y+ S+++RF+V + + IPA S ++ ++ E E P+RE VG+LMW A TRPDI+ AVRAVAR P +H KA KI YLL T + + Y D+DF + + RRSVSGA++++A + W S+ Q+ + TSEAEY+A+ + VK+ LF+ + +F+ PS + ++V EDNEGAI LA N +S R+KHIDV+HH +R+ ++ + V +V SE+QHAD+LTK L F H F L
Sbjct: 186 DINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDHPRDCHRVL-TRAGTIQETRDVTWEVLQSQLPPLQPSLPIEVAEEGGED---SDDNVETEVWPLVGRGVAHTLLKRDAVPSGARVEEVESVGAGSVGPSFSVPSSPAEPSSLANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPAARRPRHVAELADFNTASRENDEVREGRTRAQTRAVNQQSVPGLVASLGPISATELVYTLMSEQRAGDETELPKELVQDVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDFALG 1224
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM) HSP 1 Score: 454 bits (1168), Expect = 2.360e-135 Identity = 356/1158 (30.74%), Postives = 557/1158 (48.10%), Query Frame = 1
Query: 103 FEGKCFNCGKKGHRAVDCKSTKKKNEKPGAAVEKKEGVPEVRAAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLFCPRRGLFSATGARRIARQETFLEANLTGNGSVKIASGAALRAAASHDVMEVHRMLAHPS-EAITRKTAAMMGIETTGQWGA--CETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRTDNGGEFEGEFQRELDR----RSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQAVQWMDGPKKTGSDGTGSDDRGKKPAGGDIIVERGTPQLNVQELGQEQHEHEWQEAISELEGE------------TQGT-LSD----HGEDTQERC-----------------------------SVSCRRLRRKKKTAWRMCYHMALQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKI---PAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVKK 3387
F+GKCFNCG+ GH DC N A VG +RS W DSGAT HM+ R + YK + +ADG + V G G + + G ++M DV ++PGL R L+S + E+ G + ++ ++ IA + +A + K + A + H + H + +A+ + A G+ T C C + K P ++ + + Q DV GPMK S GG YV+ FVDD +++ V F+ KKS+ + + Y I+C+R+DNG EF +E+DR I H+ T P +PQ NGVAER + EKA ++ WA+A+ + + N+S TTST+ +P+EL F P +HLR FG+VGYA + K+ PK KC+F+G N + + V + RS + ER+ +DG ++ + +D + + +E+ +G + HE A+ E E + T G SD H E + R S R+ A + + A D + P +QAM+S+E +W KA +E+ +N + V R IG + ++ +K + G++ +YK RLVA+GF Q GV + E YSP + SIR++L+ AK DA+ AFL +D+ E++++E+P + +L+KAIYGL QA W+ IGF AD CV+ K + + V ++VDD++ AK +D L FK+K++G+ ++ +G I +R L Q Y++ + RF+ +++AK P SG+ L+K P E+E+M+ PYR +G L++ T TRPD+A V ++RF ENPG H KA +++ +YL TK++GI Y G + MEAYTD+D+G+ LD RRSVSG ++M+ + + S+ Q A ++EAEY+AL+ ++VL+ R + + + +VGA V+EDN+GAI LA+N + RTKH+D++HH +R+ + V YV +EDQ AD+LTK L K+
Sbjct: 226 FKGKCFNCGQVGHMKRDCPDPNAGNNDDDAVF--------------AVGKSRSAA---WLIDSGATAHMTPHRNDLFEYKDLDSDVEVTIADGKKIRVVGTGSVRL----TGIDGTRIKMIDVLFIPGLDRQLLSVSRLAER-GMIVEFQKKSCTIWNKSKAIALGKKVGKAYMLD--CEKDMAHYVEYAGVDSEWELWHARMGHLNKDALAKTQRATTGMPTLDHKSMTICGGCMKGKQTVAHFPSRSLSKTTKVLQLVHTDVMGPMKTKSKGGARYVLTFVDDYSKYIVAYFITKKSEVPVKFKTFMNLYENQWGERIKCLRSDNGTEF---VNKEMDRLCALNGIVHQKTVPYSPQQNGVAERMNRTIMEKARSML-----YYKGITTMWWAEAVSTSVYLINRS-TTSTHSSMTPHELAFRDKPRLDHLRVFGSVGYAHVDKAKRTKLEPKSFKCMFLGYAENSKGYRVYDLESNKVKVTRSLKLDERE----VDGIYESTPTESTTDIHSTEDVDEVVQLEQEQQSATQAPVGSVEDNHEEDAAMPEAESDDSMRHGLTTYRTTPGADFSDDLVFHPERERVRRPRDLILALEDEYKVNDEEDPNNDDHFWPPSPKRARVDEDGLLAEAVLAYAASVGDADDA-PTTYQQAMKSNEASKWIKAMNSELKAHADNGSWTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKIGFHSCGADQCVYVKGTK-DNYVYVCLYVDDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFN-QQDAKAVVNPCESGM-KLTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGIVYNGNNGKVAMEAYTDADWGSNLDDRRSVSGIMIMVGGAPVIFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRTMLKDLGHE-QVGATQVWEDNQGAIALASNAGYNARTKHVDIRHHFIRENVARDIILVGYVGTEDQLADMLTKALGTKR 1341
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 451 bits (1161), Expect = 2.130e-134 Identity = 355/1150 (30.87%), Postives = 568/1150 (49.39%), Query Frame = 1
Query: 76 GKNRRPSNKFEGKCFNCGKKGHRAVDCKSTKKKNEKPGAAV--EKKEGVPEVRAAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVST-----VKAVEQW-GKPLFCPRRGLFSATGARRIARQETFLEANLTGNGSVKIASGAALRAAASHDVMEV---HRMLAHPSEAITRKTAAMMGIETTGQWGA-CETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREH---KMAPKGEKCVFMGIPRNFPTGTVSVLL--------VRSRNIV-ERQAVQWMDGPKKTGSDGT----GSDDRGKKPAGGDIIVERGTPQLNVQELGQEQHEHEWQEAISELEGETQGTLSDHGEDTQERCSVSCRRLR-RKKKTAWRMCYHMALQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQ--EFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVV---DGEAEMVVV-VHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVP--TLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVKKFCKHAK 3405
GK+ RP F G C C ++GH A DC KN+K V E++E V EV A+ T+ D W DSGAT HM+ + + NY + + + D T+ G G + D T+ + + +V Y+P L +NL+S + A+ Q+ G R ATG + ++ + G + +A R A ++ H + S+ I A M G+ + CE+C K R PK T RAS + DV GPM S G + Y V F+DD +++ V F+K K + V+ Y+ ++ +R+DNGGE+ + F+ L I H+ T P P+ NG AER L E A +M +P+E WA+A+ A N+S T S N +P+E F + P ++L+ FG V Y + +H K+ K KC+F+G +P GT L +RSR+++ E ++ + + S+ +D P G + ++ +NV EQ+ E L+ E + ED R + + R R+ + Y A T D++EPRN +A + +W+KA ++E ++EN ++ V P DK ++G++ ++K K DG +EK+K RLVAQG+ Q EG+ Y E +SP SIR LLA A D E+ D AFL+ D+ +EIY++ PE ++ E P V +L K++YGL Q+ RCWN+ + + G++Q AD C++ K V +G+ V++ +HVDDIL + D ++ +G KFK++D+G+ + +G I R+R +R L Q Y+E ++KRF+++ K P G LS + P N E Y++ +G L + T TRPD+A AV ++++ P H K V +I +Y+ T ++GIT+ + + Y+D+D+ +TRRS SG + ++ ISW S+ Q + ++EAEY+AL+ ++ ++LR++ E + + V + EDN+ AI+L+ N RTKHIDV H VR+ + + V Y R+++ AD+LTK L + F K K
Sbjct: 236 GKSERP---FHGLCHFCHERGHFARDCPKKNPKNKKFANVVKGEQQEDVHEVTNQEALF-TSNDDSNCGWIIDSGATQHMTSEKNRLVNYVEFKQPCKVNLGDDRTIFAFGKGTYNLVADLGNGRTQNIALKEVLYLPDLKKNLLSVQVMGKLGALIQFDGVQCKIERNSKLLATGE---LHGKLYMLKIIPGVEYINVA-----REAPDKNLWHCRFGHLGMNGISKLINENMAEGMNCSDHGKESSLCESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVH--IPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNV-----EQNPQPILENNVPLQ-ENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADDLTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHE--------YQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTV-MCEDNQAAIQLSRNPKFHNRTKHIDVAFHFVREKVQDKSIDVVYCRTDEMLADILTKGLPRQTFEKLRK 1345
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 442 bits (1138), Expect = 2.760e-131 Identity = 349/1155 (30.22%), Postives = 573/1155 (49.61%), Query Frame = 1
Query: 31 ALSASRGTITANRENGK-NRRPSNKFEGKCFNCGKKGHRAVDCK-----STKKKNEKPGAAVEKKEGVPEVRAAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFG--RIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLFCPRRGLFSATGARRIARQETFLEANLTGN-GSVKIASGAALRAAASHDVMEV------HRMLAHPSEAITRKTAAMMGIETTGQWGA-CETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHK-MAPKGEKCVFMGIPRNFPTGTVSVLLV--RSRNIVERQAVQWMDGPKKTGSDGTGSDDRGKKPAGGDIIVERGTPQLNVQELGQEQHEHEWQEAISELEGETQGTLSDHGEDTQERC-----SVSCRRLRRKKKTAWRMCYHMALQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEF--QEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVV---DGEAEMVVV-VHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASG--VPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVKKF 3390
A +ASR + NG N+ F+GKC NC ++GH A DC S +K K A +K+ + A+ T+ W DSGAT HM+ ++ +S+Y + + + D ++ G G RI DL G + + + DV Y+P L +NL+S V+A+ + G + F G + + G +KI + A +++ H + + ++ + + M G+ + CE C K R P +RA+ + DV GPM +S+GG+ Y V F+DD TR+ V F+K K + A V S++ +RTDNGGE+ EF+ L + I H+ T P P NGV+ER L E +M + + WA+A+ A + N+S TTS E +PYE F + P ++LR FG +A ++ K K K VF+G +P GT L +R + + + +++G DG GK I V+ PQ+ +Q++ E + E + E + + G +E ++ +R RR CY +A T D++EP + ++A EW++A ++E +++N ++ V PK K ++G++ ++K K DG +E++K RLVAQG+ Q +G+ Y E +SP SIR LLA A D E+ D + AFL+ ++DE I+++ PE + QE P V +LN++IYGL QA RCWN+ + + G+ ++ ADPC++ K + +G+ + V++ ++VDDIL + + + + L ++F+++DMG+ Y +G + RNR+ R L +Q Y+E ++KRF ++ K P G +LS+ D P + E Y+ A+G L + TRPD+A AV ++++ PG H + V ++ +Y+ T G+T+ G + Y D+D+G ++TRRS SG V + ISW S+ Q + T+EAEY+AL+ ++ ++LR++ + V + +FEDN+GAI+L+ N RTKHIDV H +R+ + V V Y R+E+ AD++TK L F
Sbjct: 202 AFAASRVWNKKGQHNGNWNKEKKRVFKGKCHNCQERGHYARDCPKRNADSANRKESKGSARCAEKDDGDFITEDEALF-TSDLLHNSGWIIDSGATQHMTFDKSNLSDYVEFKQPCIVNLGDNRSILAYGKGTYRIVADL---GDHVQNISLRDVLYLPDLEKNLLS-VRAMVKLGANVR------FEGEGCEITRNSKLLAVGKMQGKLYMLKIVTVDHANIAKEDLNLKLWHYRYGHLGMDNVNKLMKGEMVQGMDCVMDGESDSVCEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKE-ITPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCS----GKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRAPSRFDDKCY-VADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDILWFSNNTEMLKKEKEALAKRFQVEDMGEVSYVLGMSVKRNREARTLTINQPKYLEGVLKRFGMQECKAVSTPLEPGRKFESLSENDTPIDVRE--------YQMAIGCLTYATNATRPDLAAAVGILSKYMARPGKDHWQGVKRVLRYVKGTLHSGLTFTAHGNNPVLYGYADADWGGDVETRRSTSGYVFQIQNNTISWCSKRQASVSRSTTEAEYIALSTACQEAVWLRRLLSDIGLKQDVPST-IFEDNQGAIELSKNPKFHNRTKHIDVSFHFIREQVNRNIVCVKYGRTENMLADVMTKALPKVSF 1321
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: Q572I3_PHYIN (Putative polyprotein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=Q572I3_PHYIN) HSP 1 Score: 441 bits (1133), Expect = 1.940e-130 Identity = 367/1167 (31.45%), Postives = 559/1167 (47.90%), Query Frame = 1
Query: 103 FEGKCFNCGKKGHRAVDCKSTKKKNEKPGAAVEKKEGVPEVRAAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLF----CPRRGLFSATGARRIARQETFLEANLTGNGSVKIASGAALRAAASHDVMEV-HRMLAHPS-EAITRKTAAMMGIE--TTGQWGACETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRTDNGGEFEGEFQRELDRRS-ITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQAVQWMDGPKK------------------TGSDGTGSDDR----GKKPAGG----DIIVERGT----------PQLNVQELG----QEQHEHEWQEAIS-ELEGETQGT----LSDHGEDTQ-ERCSVSCRRLRRKKKTAWRMCYHMALQATLDVS----EPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITY--GGQGCG---LCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVK 3384
F+GKCFNC + H DC + KK ++ A VG RS W DSGAT HM+ R + Y+ G ++ +ADG L V G G +++ G K +RM DV ++PGL R L+S K E+ F C G +A + + + L+ V+ A E+ H + H + +A+T+ + +GI G C C + K P ++ R + + DV GPM+ S GG YV+ FVDD +RF V F+K KS+ + L A Y T ++C+R+DNG EF + EL +R+ I H+ + P +PQ NGV+ER + EKA ++ + WA+A+ A + N+S TS N +PYEL F P HLR FG+ GYA V K+ PK KC F+G N + V + RS + ER+ D +G + T + D ++PA D+ +ER P+LN +L Q HE + E E T+ L +G+D ER S +R + + L + P +A+ S+E EWR+A ++E+ N + V R IG + ++ +K ++G++ +YK RLVAQGF Q G+ + E YSP + SIR +LA + DA+ AFL + + +Y+++P + G L KAIYGL QA WN GF+ AD CV+ K A + V ++VDD++ AK + + L FK+K++G+A++ +G I +R+ L Q Y++ +V+RF+ + K + P A+ + LSK P +E+ EM PYR +G LM+ T TRPDIA V +ARF E+PG H KA +++ QYL T+ GI Y G G G + EA+TD+D+G+ +D RRSVSG ++M+ + + S+ Q A ++EAEY+AL+ ++VL+ R + + M +VGA V+EDN+GAI LA+N RTKH+D++HH +R+ + ++VAY+ ++ Q AD+LTK L K
Sbjct: 208 FKGKCFNCDQVSHMKRDCPAAKKSSQDD---------------AVFAVGGERSAG---WLIDSGATSHMTPHRNDLFGYEALDSGINVTIADGKKLRVAGTGTVKL----TGLDGKRIRMVDVLHIPGLDRRLLSVGKLAERGMSVAFQRSSCVIWGRNAAIASGKKVGKAFLLDCQQEEAHFVQYAG--------PDSEWELWHARMGHLNKDALTKTQRSTIGIPHVKNGNETLCGGCMKGKQTVTTFPSRSLTRTTRVLELVHTDVMGPMRTISKGGAKYVLTFVDDYSRFVVAYFMKSKSEVGSKLKEFKALYETQWGERLKCLRSDNGTEFVNKTVLELCKRNGIVHQRSVPYSPQQNGVSERMNRTIMEKARSMLH-----YKSMSTQWWAEAVSTAVYLINRSTNTS-NSDVTPYELSFQVKPRMEHLRVFGSQGYAHVNDVIRTKLEPKSFKCTFLGYAENVKGYRVYDMDASKVKVTRSVKLDEREVGGIYDTQSPASGTVIHVTRNDDTIVPISGVERTPAQDEPMEEAEEPAQDIEMDDLELERNAEIQQLPAPEEPRLNGLDLATFHSQPPSFHEDRMVFHPETERSTRPREPLLLLGNGDDEDVERGSDGPSSPKRTRIDEDGLLAEAVLAYAASIGGVPDTPNTYAEAIASNEAGEWRRAMQSELNSHSRNGTWTLVPRGTTTRSIGCRWVFTKKRDENGRVIRYKARLVAQGFKQKFGIDFFETYSPVANMNSIRAVLAVCVTCGYIMEQLDADTAFLNSCLVNLVYMDVPLGLENAEGMKCNLLKAIYGLKQAASAWNKTIHRVFLQNGFKCCGADQCVYVKR-SKNAFVYVCLYVDDMIIAAKTRDEIREVKNALKSAFKMKELGEAKFILGMEIDHDRECGTLMIKQTRYIDDIVERFNQRNAKMVEYPCAANL-KLSKMMSPTTEKERAEMWSRPYRSLIGCLMYITTCTRPDIAYVVTQLARFLEDPGTQHWKAAIRVLQYLKSTRHHGIVYKSGTSGFGTQAVKAEAFTDADWGSNIDDRRSVSGVMVMIGNAPVVFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRAMLKDMGHE-QVGATQVWEDNQGAIALASNAGYHARTKHVDIRHHFIRENVERSTIKVAYIDTKQQLADMLTKALGTK 1335
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: A0A6G0QQ26_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ26_9STRA) HSP 1 Score: 425 bits (1092), Expect = 1.280e-128 Identity = 308/893 (34.49%), Postives = 469/893 (52.52%), Query Frame = 1
Query: 829 PKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILM--EELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQAV-QWMDGPKKTGSDGTGSDDRGKKPAGGDIIVERGTPQLNVQELGQEQHEHEWQEAISELEGETQGTLSD--HGEDTQERCSVSCRRLRRKKKTAWRMCYHMALQATLDVSE-----------------PRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPE---EFQEFPGAVGR------LNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVK 3384
P+KT + A V DV GPM+ + GG Y V F+DD +R V F+KKK++ AD I+ +R+DNGGE+ G F+ L ++ I HE T P TPQ NG+AER L E A ++ E +D +K WA+A+ + + N+ +T K+PYE+ + K P +L+ FGA+GY + K+ K KC F+G R F T V +VR+ +E + +M + G D G +D A + T + E+ QHE AI + T S H E+T + R+ + +A QA + S+ P+ +A + DEW+KA +E+ ++ N + V +P + IG + ++ K + G++ +YK RLVA+G+ Q G++Y E YSP SIR +LA +A+ E+ D + AFL ++EEIY+E+ E E E A G L +++YGL QA R WN + ++GFE A DPCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++KDMG A + +G I N + R L Q Y ES++K+ + K P GV L+KADEPQ E+K +MK PYR VG+LM+ + TRPDI+ AV ++RF ENPG H A +K+ +YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML + W S Q+ A ++EAEY+AL++ VK+ +++R++ + + +VGA ++EDN+GA+ LA N TKHID+++H +RD + + V++ YV +++Q AD +TK L K
Sbjct: 10 PEKTVKSAGVL-DLIHSDVMGPMQTKTPGGCTYAVTFIDDFSRHVTVYFMKKKAEVLEKFKKFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIRHEKTVPYTPQQNGLAERMNRSLVEMARCMLYHEGID-------KKWWAEAVNTSAWIINR--IPNTVAVKTPYEIVYQKKPQLKNLKVFGALGYEHIPDEKRRKLDAKAFKCRFLGYEDGVKGYRVFNVATGQVKIVRTVKFMETTSTGDFMT--EVEGDDKDGDEDVAAPHATAPSHGQTQTLTIFNDEVVPLQHEVTTDTAIVPAPSHSMITRSRTRHIEETTDPKEAEGRKKQIVAPSAIGTKRQKVNQARVKPSDELLAIEEGQLMAATEEVPKTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKDRLVAKGYSQRHGINYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYNMERRTLGISQKAYTESIIKKVGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRYHFIRDKAVSNEVKLEYVDTKNQLADFMTKGLSSK 886
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 434 bits (1115), Expect = 6.900e-128 Identity = 354/1163 (30.44%), Postives = 575/1163 (49.44%), Query Frame = 1
Query: 94 SNKFEG-KCFNCGKKGHRAVDCKSTKKKNEKPGAAVEKKEGVPEVRAAAAMVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADG-NTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLFCPRRGLFSATGARRI-ARQETFLEANLTGN-GSVKIASGAALRAAASHDVMEV--HRMLAHPS-EAITR-KTAAMMGIETTGQWG---ACETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIPRNFPT----GTVSVLLVRSRNIV----ERQAVQWMDGPKKTGS------DGTGSDDRGKKP------------AGGDIIVERGTPQLNVQELGQEQHEHE------------WQEAISELEGETQGTLSD--HGEDTQER---CSVSCRRLRRKKKTAWRMCYHMALQATL-DVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMV-VVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGVPT---LSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQV-QEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVKKFCK 3396
S+K +G +C+ C GH A C + + +K + E ++ + S K EW DSG + H++ + N + S +I A+ + + G +++ + G T+ + + +V YVP L NL+S + V++ +F ++GAR A + A L + + ++S +A A E+ HR +AH + +T+ K + G+ + + CETC K+ R P +E ++S D+ GP++ SL G+ Y++ F+DD + F+ KKS +S I +RTDNGGEF + L I H+ + P TP+ NG AER + EK L+ + I K WA+A AC + N+S T T +P ++W GK PT H+R FG+ YA S K+ PK C+ +G N V + SR+++ E+ + + +K G D D +P GG+ G ++ E E +Q + +T D + + Q+R RR +R K+ ++ ++ +L + +P + + D W++A + E +EN ++ V P K+ + +K +++ K GKI K+K RLV +G Q +G+ + E +SP +SIR LLA AA +D ++ DA AFL+ D+ EEIY+ PE +QE G V RL K++YGL QA R WN K + IG Q+K DPC++ K + +MV V V VDD+L + DK ++L + FK+ D+G+A++ +G I+R+R+ +++ DQ Y+++++ RF + E PAA+ + LSK +P +P+E+++M+ PY+EAVG+L++ + + RPDIA AV V+RF NPGPAH AV +I +Y+ T DW + Y G + Y DSDF + +D R+SV+G V ++ G++SW ++ Q TA T+EAEY+AL+ ++ L+LR + +E + PS R+ + +F DN+GA+ LA N RTKHIDV+HH +R+ + ++ YV + D AD LTK L KF K
Sbjct: 212 SSKSKGPRCYECNGYGHVAKSCAN---RGDKQQVSRNSYVATNEQQSLFTALSAHTSANKTEWYFDSGCSAHLTKDKNAFVN-ETTSATMNISTANRKDIMQTSSIGDVKLPVSVYGSTSD-ITVRNVYYVPDLCVNLLSVSQIVKKGNTVVF-------DSSGARVFDANNDVLASATLENDLFRLDLSSQSAFLANCDAPKEEILWHRRMAHVNLPHLTKLKNGLVHGMNFSNKAPKEFVCETCAVSKSHRLPFPP-SESKSSGILDLIHSDLVGPLE-KSLAGSQYMLTFLDDYSHMAFCYFLAKKSQVYETFVSFKQFVENQTSKKIRILRTDNGGEFCSNNMSKFLSVSGIQHQTSVPHTPEQNGKAERLNRTILEKVRCLLNDSQLPI-----KFWAEAANTACYLMNRSPTKCTEA--TPLQIWTGKKPTVKHVRVFGSKTYAHIPSANRKKLDPKSRICILVGYSANCKAYRLYDPVKKEIFVSRDVIFSEHEKGSSLLSEFERKHGDVHPLFDDQVSEDGEAAEPELMATPDGATGVVGGEAGPRDGNFSSSINETRNSDVTGESTDPNAXXXXXXYQSMSDDCSDQTDDEFDDPTYRVNPQQRSFDAVTEPRRGQRVKRPPEKLKDYVTYAMSLSEPDDPTTVEEIKTRSDRDLWKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQE-SGKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYK--SSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGM--ENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKSSE-ITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERI-PLRIFVDNQGALNLAQNGSYQSRTKHIDVRHHFLREKISEKLIKPTYVPTSDMVADSLTKSLCPVKFIK 1346
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA) HSP 1 Score: 420 bits (1080), Expect = 1.180e-126 Identity = 305/897 (34.00%), Postives = 471/897 (52.51%), Query Frame = 1
Query: 829 PKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLSIECVRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILM--EELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYAR-QSVREHKMAPKGEKCVFMGIP------RNFPTGTVSVLLVRSRNIVERQAV-QWMDGPKKTGSDGTGSDDRGKKPAGGDIIVERGTPQLNVQELGQEQHEHEWQEAI-----------------------SELEGETQGTLSDHGEDTQERCSVSCRRLRRKKKTAWRMCYHMALQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEF---------PGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVK 3384
P+KT + A V DV GPM+ + G Y V F+DD +R V F+KKK++ AD I+ +R+DNGGE+ G F+ L ++ I HE T TPQ NG+AER L E A ++ E +D +K WA+A+ + + N+ T T K+PYE+ + K P +L+ FGA GY + K+ K KC F+G R T V +VR+ +E + +M ++ D + P+ G T + E+ QHE + AI E EG + ++ T+ R VS R++ + + + AT +V P+ +A + DEW+KA +E+ ++ N + V +P + IG + ++ K + G++ +YK RLVA+G+ Q G+ Y E YSP SIR +L +A+ E+ D + AFL ++ EIY+E+PEE +E V L +++YGL QA R WN ++ ++GFE A ADPCV+ + +GE E +V ++VDD+L ++ A + A + +KF++KDMG A + +G I + + R L Q Y ES++K+F + K P GV L+KADEPQ E+K +MK+ PYR VG+LM+ A TRPDI+ AV ++RF ENPG H A +K+ +YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LML + + W S Q+ A ++EAEY+AL++ VK+ +++R++ + + +VGA ++EDN+GA+ LA N RTKHID+++H VR+ + + V++ YV +++Q AD +TK L K
Sbjct: 34 PEKTVKSAGVL-DLIHSDVMGPMQTKTPGDCTYAVTFIDDFSRHVTVYFMKKKAEVLEKFKMFKADMENATGRKIKRLRSDNGGEYTGRLFKEYLSKQGIRHEKTVTYTPQQNGLAERMNRSLVEMARCMLYHEGID-------KKWWAEAVNTSAWIINRIPNTVTV--KTPYEIVYQKKPQLKNLKVFGAHGYGHIPDEKRRKLDAKAFKCRFLGYEDGVKGYRILNVATGQVKIVRTVKFMETTSTGDFMTEVERDDKDEDVAAPHATAPSRGQTQ----TITIFKDEVVPLQHEVTTETAIVPAPSHSTITRSRTRYIEATTDPEEAEGRKKQIVAPSAIGTK-RQKVSQARVKPSDELL-AIEGGQLMAATEEV--PKTYAEATTRQDQDEWKKAIASELESLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLEKCSAEGMEIEQCDVDTAFLYEKLEAEIYMELPEELRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFVREKAVSNEVKLEYVDTKNQLADFMTKGLSSK 908
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 424 bits (1091), Expect = 6.100e-125 Identity = 347/1145 (30.31%), Postives = 544/1145 (47.51%), Query Frame = 1
Query: 112 KCFNCGKKGHRAVDCKSTKKKNE---KPGAA-VEKKEGVPEVRAAAAM-VGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLFCPRRGLFSATGAR-RIARQETFLEANLTGNGSVKIASGAALRAAASHDVMEV-HRMLAH---PSEAITRKTAAMMGI-----ETTGQWGACETCFQVKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLV----------ADYITPQKLSIECVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVINVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKS-PTANHLRPFGAVGYAR--QSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQA-VQWMDG--------PKKTGSDGTGSDDRGKKPAGGDIIVERGTPQLNVQELGQEQHEHEWQEAISELEGETQGTLSDHGEDTQERCSVSCRRLRRKKKTAWRMCYHMALQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEF--QEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEQAKADPCVFRKVV---DGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGVPTLSKADEPQNPEEKEEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKDWGITYGGQGCG-LCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTAAGTSEAEYVALAEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVKKFCK 3396
KC C K GH A +C KKKN+ K G A + K E V +V+A + + + ++ E E W DSGAT HM+ + + NY ++ +AD + L G G + + + K+V + DV +VP + L S E+ F S G R + ++ L T N G A+ D +++ H+ H + + K + G+ ET + CE C K R PKK+ + DV GPM S+GG+ Y V F+DD +R+ V +K KS+ A V + + +I+ +R+DNGGE+ EF R I+ E T P +PQ NGVAER L E A ++ I K WA+A+ AC V N+S T E +PYE+W K P ++L+ FG Y + R+ K K C+F+G P N + T + R VE+ ++ DG P+ T D D+ + R +LNV L GE W A A +D EP +A+ S + W+ A + E ++EN + V P DK ++G+K ++K K G DGKI++ K RLVAQG+ Q G+ Y + ++P SIR +LA D EL D + AFL D++E+I+++ PE F ++ P +L K+IYGL Q+ RCWN K + + GF + ADPC++ K + D ++V V+VDD+L + + +LG++F+++D + + +G + R+RK R L DQ+ ++ S++ RF++ E K P A+ + K ++ + EE +K+ Y+ A+G L + + TRPDI+ AV +++ PG H V ++ +YL T D+G+ Y G G + + + D+D+ +DTR+S SG V + +SW S+ Q + A +EAEYVAL++ ++V++LR + + M+ + +FEDN+GAI+LA N+ RTKHID+K H VRDA + + + Y +++ ADLLTK L +F K
Sbjct: 212 KCHYCKKTGHFAREC--YKKKNDLKRKEGQAKLAKDEAVSDVQANSELALKSSNRIEDENWWIDSGATQHMTPQKESIENYVAFKEPITVRLADESILYSYGKGDVHLTVKDTTEKVKIV-LKDVLFVPKIQNKLFSLPAVTEKGYIVDFQGDSCGISIEGKRYSVGKKHGKLYKLNTINSDQTCYIGNAM------DEIDLWHQRYGHLGYDNLKLLNKKEMVNGLNFELKETVNR--NCEGCAMGKQHRQPFPKKSTNTTKGLLELIHSDVCGPMDVPSVGGSRYFVTFIDDYSRYTTVYMMKHKSEVLAKFTEFVNLVENRTGLKVKRLNVENQAIQRLRSDNGGEYTSTEFTSFCTDRGISREPTIPYSPQQNGVAERMNRTLLETARSMLHHAQKPI-----KFWAEAISTACYVRNRSPTAFLKE-TTPYEIWHRKKKPDVSNLKVFGCKSYVHVPDTKRKGKFDKKSISCIFVGYPSNENGFKFYDPQTRKMFRSRDVTFVEKDFDIEKFDGTNSNFEFFPESTEPDEP-EDNXXXXXNARPVRTRRPPERLNV------------------LTGE------------------------------WWNLIDAASIAIVDEEEPTTIEEALSSPNAELWKDAIQNEYDSLIENETWKLVEMPPDKNLVGSKWVFKHKRGADGKIQRCKARLVAQGYSQKSGIDYNDVFAPVAKYNSIRSVLAITNELDLELHQMDVKTAFLNGDLEEDIFMKQPEGFINRDNPNMACKLQKSIYGLKQSARCWNEKMDEFLKESGFTRNDADPCIYHKQITKGDKSFTLIVAVYVDDLLIACNNIQILREQKQKLGERFEMEDKSEVHFILGMQVKRDRKNRRLTIDQNAFLSSVLNRFNMN-ECK-PVATPLEPSMKFEKLADDEEI--VKLKDYQSAIGCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFE-QTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEK 1285 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1023.374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1023.374.1 >prot_D-herbacea_F_contig1023.374.1 ID=prot_D-herbacea_F_contig1023.374.1|Name=mRNA_D-herbacea_F_contig1023.374.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=1142bp RLLRQQQDSKALSASRGTITANRENGKNRRPSNKFEGKCFNCGKKGHRAVback to top mRNA from alignment at D-herbacea_F_contig1023:51223..55058- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1023.374.1 ID=mRNA_D-herbacea_F_contig1023.374.1|Name=mRNA_D-herbacea_F_contig1023.374.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3836bp|location=Sequence derived from alignment at D-herbacea_F_contig1023:51223..55058- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1023:51223..55058- >mRNA_D-herbacea_F_contig1023.374.1 ID=mRNA_D-herbacea_F_contig1023.374.1|Name=mRNA_D-herbacea_F_contig1023.374.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=6852bp|location=Sequence derived from alignment at D-herbacea_F_contig1023:51223..55058- (Desmarestia herbacea DmunF female)back to top |