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Homology
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: D8LKV4_ECTSI (Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV4_ECTSI) HSP 1 Score: 677 bits (1748), Expect = 5.130e-244 Identity = 338/399 (84.71%), Postives = 367/399 (91.98%), Query Frame = 1
Query: 1 GGSPVHRSEPTEGVTLRGRRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDSEDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQGLYVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDG---DYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDPDLEKDEEVVSRSQALEDALASLS 1188
GG PVHR E EGV LR RRNWRIF+AFAR+EYPECL IIEEQL ACNGLAEY I+VK I+RAQG+IQESL LFQAATCLNPQN +NLK+VGRCLFLLGKH AAL VY EAQ+IDSEDWEVWH+RGLCY+HLKQFERALEAF+QANSISRHDST+LHMGKV+RLQ KPAEAL VYEEALEFSPESPELLTTVGLLHLQQG+NQKAFECLGNALTHDPR+ KAILAAGSIIQDNQDMDVALVKYRVSAVQ Y+AAVACLKRALYLDPFEWIVAYNLGLVHL+TSQYASAFHHFSAAINLKPDFAAS+MYLAITLARL DFDNACSAY+KAL LDG DYLTHLNYAVTLLNNDEPERA EH+ SFKK+F+ALDPD E+D+EV++RSQAL ++L + S
Sbjct: 13 GGPPVHRPEAIEGVVLRERRNWRIFSAFARQEYPECLQIIEEQLRACNGLAEYAIHVKGQIVRAQGQIQESLVLFQAATCLNPQNPSNLKEVGRCLFLLGKHKAALDVYGEAQQIDSEDWEVWHSRGLCYMHLKQFERALEAFDQANSISRHDSTFLHMGKVYRLQDKPAEALTVYEEALEFSPESPELLTTVGLLHLQQGENQKAFECLGNALTHDPRNPKAILAAGSIIQDNQDMDVALVKYRVSAVQCKYIAAVACLKRALYLDPFEWIVAYNLGLVHLSTSQYASAFHHFSAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKALELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDTERDQEVLARSQALANSLGASS 411
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: A0A6T9B7X8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9B7X8_9EUKA) HSP 1 Score: 486 bits (1252), Expect = 1.090e-168 Identity = 243/400 (60.75%), Postives = 309/400 (77.25%), Query Frame = 1
Query: 37 GVTLRGRRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDSEDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDPDLEK-DEEVVSRSQALEDALA 1179
GVTLR R NW I + R++Y +CL IE L C GLAEYPIYVKALI R +G I ESL LFQAATCLNP N++NLKQVGR L+LLG+H AA+ VY+EA K+ SEDWE+WHN+GLC ++LKQ+E A+E ++AN I RHD+T++ +GKV+ LQ + A+ VY EA+EFSPE+PE+LTT+GLL+L+ G+N KAF+ LGN+LTHDP++ K ILAAGSIIQDN DMDVALVKYR++AVQ G+ +VAA+ACLKRALYLDPFEWI++YNLGLVHLNT QYASAFH+FS +INLKPDF +S+MYLAITL+RL DF+NA SAYEKA+ ++ D+L LNY V L N E ++A EHF +F++LF LD + + D EV+ + AL++ALA
Sbjct: 3 GVTLRERVNWLIHIQYVRQDYNDCLKTIEAHLAQCRGLAEYPIYVKALIKRQRGEINESLQLFQAATCLNPHNVSNLKQVGRSLYLLGRHKAAIDVYEEALKLGSEDWEIWHNKGLCCMYLKQYEAAIECLKRANLIQRHDATFMQLGKVYTLQEQYRNAIDVYLEAIEFSPENPEILTTIGLLYLRLGENLKAFDYLGNSLTHDPKNPKTILAAGSIIQDNSDMDVALVKYRIAAVQTPNSAQLWNNIGMCFFGKQRFVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSTSINLKPDFPSSYMYLAITLSRLEDFENAYSAYEKAIEMEEDHLFELNYTVALYINGEVDKAREHFATFERLFTKLDDESKNADPEVIEQRAALQEALA 402
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: A0A8J6CHX9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHX9_DIALT) HSP 1 Score: 485 bits (1249), Expect = 4.440e-168 Identity = 241/391 (61.64%), Postives = 303/391 (77.49%), Query Frame = 1
Query: 49 RGRRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDSEDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAV------------------QGLYVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDPDLEK-DEEVVSRSQAL 1164
R R NW I + ++ Y CLA+IEEQL NGL EYPIY+KALI R +G IQ+SL LFQAATCLNP N+ NLKQVGR L+LLGKH AAL VY EA +++ EDWEVWHN+GLC ++LKQ+E+A++ F+QAN+I +HD TY+ +GKV+ LQ A+ VY EAL+FSP++PE+LTTVGLL+L+ G+N +AF+ LGN+LTHDP++ K ILAAGSIIQD+ DMDVALVKYRV+AV + YVAA+ACLKRALYLDPFEWI++YNLGLVHLNT QYASAFH FS++INLKPDF +S+MYLAITL+RL DFDNACSAYEKA+ ++ D+L LN+A+TL NNDE E+A EHF F++L+ LD + + D EV + QAL
Sbjct: 16 RERVNWLIHVNYVQQNYDHCLALIEEQLKMHNGLCEYPIYIKALIKRQRGEIQDSLQLFQAATCLNPNNINNLKQVGRSLYLLGKHKAALDVYKEAMRLNEEDWEVWHNQGLCQMYLKQYEKAIDCFKQANAIQQHDVTYIQLGKVYTLQEDFRAAIEVYLEALDFSPDNPEMLTTVGLLYLRLGENYRAFDFLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALVKYRVAAVATPNSAQLWNNIGMCFFGKQRYVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHFFSSSINLKPDFPSSYMYLAITLSRLDDFDNACSAYEKAIEMEDDHLFELNFAITLYNNDEVEKAAEHFAKFEQLYAKLDDEAKSSDPEVAEQRQAL 406
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: A0A7S3GDF2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GDF2_9EUKA) HSP 1 Score: 484 bits (1247), Expect = 7.760e-168 Identity = 240/393 (61.07%), Postives = 307/393 (78.12%), Query Frame = 1
Query: 43 TLRGRRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDSEDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDPDLEK-DEEVVSRSQAL 1164
TLR ++N I + R++Y +CL +IEEQL C GL EYPIYVKALI R +G+I ESL LFQAAT LNP N+ANLKQVGR L+LLGKH AA+ VY+EAQKI +DWE+WHN+GLC + LK+++ A+E+F ANSI RHD+TY+ +GKV+ LQ A+ VY EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGNALTHD ++ K ILAAGSIIQD+ DMDVAL+KYRV+A Q G+ YVAA+ACLK+ALYLDPFEWI++YNLGLVHLNT QYASAFH+FSA+INLKPDF +S+MYLAITL+RL DF+NACSAYEKA+ ++ DY+ LNY++TL NN + E+A +HF F++LFQ LD + + D +V+ + QAL
Sbjct: 10 TLREKKNALIHRLYIRQDYDDCLKVIEEQLKECKGLCEYPIYVKALIKRQRGQINESLQLFQAATVLNPHNVANLKQVGRSLYLLGKHKAAIDVYEEAQKIGIDDWEIWHNKGLCNMFLKKYKEAIESFRHANSIQRHDATYMQLGKVYTLQENYKAAIEVYLEALEFSPENPEILTTIGLLYLRLGENYRAFDFLGNALTHDAKNPKTILAAGSIIQDHSDMDVALIKYRVAATQTPNSAQLWNNIGMCFFGKQRYVAAIACLKKALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSASINLKPDFPSSYMYLAITLSRLDDFENACSAYEKAIEMESDYMFELNYSITLYNNGDVEKAKQHFVEFERLFQELDEETKNADPDVLEQRQAL 402
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: A0A6S9RQ16_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RQ16_CHRCT) HSP 1 Score: 478 bits (1230), Expect = 5.360e-165 Identity = 236/372 (63.44%), Postives = 292/372 (78.49%), Query Frame = 1
Query: 55 RRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDSEDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALD 1116
R NW I + R++Y ECL IE+ L G+ EY IYVKALI R +G IQESL LFQAATCLNP N++NLKQVGR L+LLG+H AA+ VYDEA++I EDWE+ HNRGLC+L+LKQ+E A AF++ANSI RHD+TY+ +GKV+ LQ A+ VY EALEFSPE+P+LLTT+GLLHL+ G+N KAF+ LGN+LTHDP++ K ILAAGSIIQD+ DMDVALVKYRV+AVQ G+ YVA++ACLKRALYLDPFEWI++YNLGLVHLNT QYASAFHHFS +INLK DFA+S+MYLAITL+RL D +NAC+AYEKA+ ++ D++ LNYA+TL NN+E ERA EHF F+++F LD
Sbjct: 18 RHNWHIHMLYVRQDYDECLKAIEKALKESKGMCEYAIYVKALIKRQRGEIQESLQLFQAATCLNPHNISNLKQVGRSLYLLGRHRAAIDVYDEAERIGIEDWEIKHNRGLCFLYLKQYEEAANAFKKANSIQRHDNTYVQLGKVYTLQEDYRAAIEVYMEALEFSPENPDLLTTLGLLHLRLGENFKAFDYLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRYVASIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHHFSTSINLKADFASSYMYLAITLSRLDDLENACAAYEKAIDMEEDHMFELNYAITLANNEELERAKEHFAQFERIFAKLD 389
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: A0A7S0X8L8_9CHLO (Hypothetical protein n=2 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X8L8_9CHLO) HSP 1 Score: 478 bits (1231), Expect = 1.400e-164 Identity = 236/396 (59.60%), Postives = 306/396 (77.27%), Query Frame = 1
Query: 49 RGRRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDSEDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDPDLE-KDEEVVSRSQALEDALA 1179
R RRN++I + R+++ +CL +IE L NG+ EYPIYVKALI R QG+IQESL LFQAAT LNP N+ANLKQVGR L+LLGKH AA+ VYDEAQ+I EDWE+WHN+GLCY++LK ++++++ F QAN + RHD+T+ MGKVF LQ +A+ VY EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGN+LTHDP++ K ILAAGSIIQD+ DMDVAL+KYR++AVQ G+ Y+A++ACLKRALYLDPFEWI++YNLGLVHLNT Q ASAFH FS++INLK DF +S+MYLAITLA+L D DNAC+AYEKA+G++ D+L HLNYAVTLLN+ + RA + F+KLF ALD + + D +++ + L ALA
Sbjct: 67 RERRNYQIHLLYVRQDFKDCLVLIETVLAEFNGMCEYPIYVKALIKRQQGQIQESLQLFQAATALNPHNVANLKQVGRSLYLLGKHKAAIDVYDEAQRIGVEDWEIWHNKGLCYMYLKDYDQSVDCFRQANEVQRHDTTFTQMGKVFTLQENYKQAIEVYLEALEFSPENPEVLTTIGLLYLRLGENYRAFDFLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALIKYRIAAVQTPNSAQLWNNIGMCFFGKQRYIASIACLKRALYLDPFEWIISYNLGLVHLNTGQCASAFHFFSSSINLKSDFPSSYMYLAITLAKLDDLDNACAAYEKAIGMESDHLFHLNYAVTLLNSGDETRAAQQLEEFEKLFGALDDETKGSDPDILLQRNLLTRALA 462
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: A0A067C533_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C533_SAPPC) HSP 1 Score: 473 bits (1216), Expect = 6.220e-163 Identity = 248/414 (59.90%), Postives = 310/414 (74.88%), Query Frame = 1
Query: 7 SPVHRSEPTEGVTLRGRRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDS-EDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDPDLEK-DEEVVSRSQALEDALASLS 1188
SP+ P +N+ I + R+EY ECL +IEE L +GL E+PIYVKALI++ GRIQESL LFQAATCLNP+N NLKQVGR L+LLGKH AA+ VY+E QK+ EDWEV HN GLCY++LK F+ A+EAF+ AN++ RHD+T+L +GKV L+ A+ VY EALEFSPESPELLTT+GLL+L+ G+N +AF+ LGN++THDPR+AK ILAAGSIIQD+ DMDVALVKYRV+AVQ G+ +VAAVA LKRALYLDPFEWI +YNLGLVHLNT QYASAFH+FSAAINLKPDF +S+MYLAITL RL DF+NACSAY+KA+ ++ D++ HLNYA+TL NNDE ERA F F+ +F+ LD D EV+ + QAL +AL++++
Sbjct: 9 SPLSARGPPRMEPPMTAKNYLIHKLYLRQEYTECLRLIEEMLKEHHGLCEFPIYVKALILQRNGRIQESLQLFQAATCLNPENKDNLKQVGRSLYLLGKHKAAIEVYEETQKLPGLEDWEVSHNIGLCYMYLKDFDHAIEAFQHANNVHRHDTTFLQLGKVHTLRDDFKAAINVYLEALEFSPESPELLTTIGLLYLRIGENFRAFDYLGNSMTHDPRNAKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVAAVASLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHYFSAAINLKPDFPSSYMYLAITLGRLDDFENACSAYDKAIEMEADHMFHLNYALTLFNNDELERAKVQFNKFEAIFETLDEATRSSDPEVMDQRQALLNALSTVN 422
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: A0A7S2C5V5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5V5_9STRA) HSP 1 Score: 472 bits (1215), Expect = 1.090e-162 Identity = 240/413 (58.11%), Postives = 308/413 (74.58%), Query Frame = 1
Query: 49 RGRRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDSE-----------------DWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ------------------GLYVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDP-DLEKDEEVVSRSQALEDALA 1179
R ++N I A + R E+ EC+ +IEEQL C EYP+YVKALI+R +G+IQESLTLFQ+ATCLNP N ANLKQVG +LLGKH A+ VY+EAQ+I E DWE+WHN+GLCY+H+KQ A+E+F++ANSI RHD+TY+ +GKV++LQ EAL VY++A++FSPE+PELLTTVGL+ L+ +N KAFE LGN+LTHDPR+AK ILAAGSIIQDNQ+MD AL+KYRV+AVQ + AAV+CLKRALYLDPFEWI+ YNLGLVHLNT QYASAFH+FSA+INLK DF AS+MYLAITLARL DF N+C+AYEKA+ ++ D++ HLNYA+TL N+ E ++A H FK+L+ L+ D+E D EV+++SQ L++AL+
Sbjct: 11 REKQNAFIHACYVRHEHDECMRVIEEQLSEC-AFCEYPLYVKALILRQRGKIQESLTLFQSATCLNPNNTANLKQVGHSYYLLGKHKQAIQVYEEAQRIGEENVRKRNEVGRQARLSADDWEIWHNKGLCYIHMKQLGLAIESFQRANSIQRHDATYMQLGKVYQLQENFEEALKVYQDAIDFSPENPELLTTVGLVWLRLQENPKAFEQLGNSLTHDPRNAKTILAAGSIIQDNQEMDTALIKYRVAAVQTPNSAQLWNNIGMCFFGKAFHTAAVSCLKRALYLDPFEWIICYNLGLVHLNTGQYASAFHYFSASINLKSDFPASYMYLAITLARLKDFPNSCTAYEKAISMEQDHMNHLNYAITLYNHGEVDKARTHHGIFKQLYAELNQEDVEHDYEVMAQSQGLQEALS 422
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: K3WTZ6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTZ6_GLOUD) HSP 1 Score: 469 bits (1208), Expect = 1.170e-161 Identity = 238/393 (60.56%), Postives = 307/393 (78.12%), Query Frame = 1
Query: 58 RNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQKIDS-EDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDPDLEK-DEEVVSRSQALEDAL 1176
RNW + + R E+ ECL ++E+ L GL+EYP+Y+KALI+R GRIQESL LFQAATCLNP N NLKQVGR L+LLGKHMAA+ VY+E + +DWE++H+ GLCY++LK++E+A++ F+ AN+I+RHD+T+L +GKV+ LQ A+AVY EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGN+LTHDPR+ K ILAAGSIIQD+ DMDVALVKYRV+AVQ G+ +VA+VACLKRALYLDPFEWI +YNLGLVHLNT QYASAFH FSAAINLKPDF +S+MYLAITL RL DF+NACSA+EKA+ ++ D+L HLNYA+TL NNDE ERA F F+++F+ALD + + D+EV+ + Q+L + L
Sbjct: 32 RNWYLHRLYLRSEFKECLRVVEDVLKTHQGLSEYPLYIKALILRHSGRIQESLQLFQAATCLNPDNKENLKQVGRSLYLLGKHMAAIEVYEEILTMGRVDDWEIYHSIGLCYMYLKEYEKAVDNFQHANTINRHDATFLQLGKVYTLQEDFKAAIAVYLEALEFSPENPEILTTLGLLYLRIGENFRAFDYLGNSLTHDPRNPKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVASVACLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHFFSAAINLKPDFPSSYMYLAITLGRLDDFENACSAFEKAIEMERDHLFHLNYAITLYNNDEMERAKVQFDRFEEIFEALDDETKNADQEVLEQRQSLLNVL 424
BLAST of mRNA_D-herbacea_F_contig102.354.1 vs. uniprot
Match: C1MJ52_MICPC (Bardet-biedl syndrome 4 n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MJ52_MICPC) HSP 1 Score: 470 bits (1209), Expect = 3.150e-161 Identity = 238/402 (59.20%), Postives = 305/402 (75.87%), Query Frame = 1
Query: 19 RSEPTEGVTLRGRRNWRIFAAFARKEYPECLAIIEEQLCACNGLAEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLGKHMAALGVYDEAQK-IDSEDWEVWHNRGLCYLHLKQFERALEAFEQANSISRHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINLKPDFAASFMYLAITLARLGDFDNACSAYEKALGLD-GDYLTHLNYAVTLLNNDEPERATEHFRSFKKLFQALDPDLEKDEEVVSRSQAL 1164
+++ R RRN+ I + R+E+ ECLA+IEE L GL EYPIYV+ALI R +G+I ESLTLFQAAT LNP N+ANLKQVGR L+LLG+H AA+ VYDEAQ + ++DWE+WHN+GLCY++LKQF+ ++E F+ AN I RHD+TY MGKV+ LQ K EA+ VY EALEFSPE+PE+LTT+GLL+L+ G++ +AF+ LGN+LTHDPRD KAILAAGSIIQDNQD+DVAL+KYRV+A Q G+ Y+AA+ACLKRALYLDPFEWI+AYNLGLVHLNT Q ASAFH FS++INLKPDF +++MYLA+TLA+L D DNAC+AYEKA+ +D GD+L HLNYA+TL E ER E F+ L++ LD + + ++ V + + L
Sbjct: 44 QAQKASKAIARERRNYHIHRLYVRQEHKECLAVIEEVLGEFGGLCEYPIYVRALIKRHEGKIAESLTLFQAATALNPHNVANLKQVGRSLYLLGRHRAAIDVYDEAQNAVGADDWEIWHNKGLCYMYLKQFDESVECFKGANDIQRHDTTYAQMGKVYALQEKYNEAVDVYLEALEFSPENPEVLTTIGLLYLRMGESFRAFDYLGNSLTHDPRDPKAILAAGSIIQDNQDVDVALIKYRVAATQTPNSAQLWNNIGMCFFGKRRYIAAIACLKRALYLDPFEWIIAYNLGLVHLNTGQAASAFHFFSSSINLKPDFPSAYMYLAVTLAKLDDHDNACAAYEKAIEMDPGDHLFHLNYALTLYVAGEKERCVERLEVFEGLWKGLDDETKNVDDEVPKMRGL 445
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 679.5 |
| Seed ortholog evalue | 9.6e-193 |
| Seed eggNOG ortholog | 2880.D8LKV4 |
| Preferred name | BBS4 |
| KEGG ko | ko:K11447,ko:K16531 |
| KEGG Pathway | ko05202,map05202 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000086,GO:0000226,GO:0000242,GO:0000278,GO:0000281,GO:0000288,GO:0000291,GO:0000785,GO:0000910,GO:0000956,GO:0001085,GO:0001103,GO:0001654,GO:0001708,GO:0001750,GO:0001754,GO:0001764,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001917,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003143,GO:0003352,GO:0003356,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005929,GO:0006139,GO:0006325,GO:0006401,GO:0006402,GO:0006464,GO:0006482,GO:0006725,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0008015,GO:0008064,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008214,GO:0008217,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009933,GO:0009934,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0012505,GO:0014020,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0016358,GO:0016462,GO:0016477,GO:0016569,GO:0016570,GO:0016577,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019216,GO:0019221,GO:0019222,GO:0019439,GO:0019538,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021915,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030534,GO:0030832,GO:0030833,GO:0030837,GO:0030900,GO:0031023,GO:0031090,GO:0031175,GO:0031253,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031514,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032231,GO:0032271,GO:0032272,GO:0032391,GO:0032400,GO:0032401,GO:0032402,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032535,GO:0032870,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034260,GO:0034451,GO:0034452,GO:0034453,GO:0034454,GO:0034464,GO:0034504,GO:0034613,GO:0034641,GO:0034655,GO:0034708,GO:0035050,GO:0035097,GO:0035148,GO:0035176,GO:0035239,GO:0035295,GO:0035327,GO:0035845,GO:0035869,GO:0036064,GO:0036211,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040018,GO:0042221,GO:0042461,GO:0042462,GO:0042592,GO:0042995,GO:0043005,GO:0043009,GO:0043014,GO:0043086,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043473,GO:0043928,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044320,GO:0044321,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044666,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045165,GO:0045185,GO:0045444,GO:0045494,GO:0045724,GO:0045776,GO:0045927,GO:0046483,GO:0046530,GO:0046548,GO:0046700,GO:0046907,GO:0048232,GO:0048468,GO:0048487,GO:0048507,GO:0048509,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050893,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051270,GO:0051276,GO:0051301,GO:0051302,GO:0051336,GO:0051346,GO:0051457,GO:0051492,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0055044,GO:0055087,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060324,GO:0060429,GO:0060491,GO:0060562,GO:0060606,GO:0060612,GO:0060613,GO:0060632,GO:0061371,GO:0061448,GO:0061512,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0070988,GO:0071310,GO:0071345,GO:0071495,GO:0071539,GO:0071557,GO:0071704,GO:0071840,GO:0071944,GO:0072175,GO:0072359,GO:0072393,GO:0072595,GO:0072698,GO:0080090,GO:0090066,GO:0090304,GO:0090596,GO:0097458,GO:0097499,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0098791,GO:0110020,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1901360,GO:1901361,GO:1901564,GO:1901575,GO:1902017,GO:1902019,GO:1902115,GO:1902117,GO:1902494,GO:1902855,GO:1902903,GO:1902904,GO:1903047,GO:1903546,GO:1905508,GO:1905515,GO:1990234,GO:2000145 |
| EggNOG free text desc. | cellular component assembly |
| EggNOG OGs | COG0457@1,KOG1124@2759 |
| Ec32 ortholog description | Bardet-Biedl syndrome 4 |
| Ec32 ortholog | Ec-11_005700.1 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03036 |
| Exons | 10 |
| Model size | 1191 |
| Cds size | 1191 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927433.9701207-CDS-D-herbacea_F_contig102:477767..477851 | 1622927433.9701207-CDS-D-herbacea_F_contig102:477767..477851 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 477768..477851 - |
| 1690790168.34878-CDS-D-herbacea_F_contig102:477767..477851 | 1690790168.34878-CDS-D-herbacea_F_contig102:477767..477851 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 477768..477851 - |
| 1622927433.9868557-CDS-D-herbacea_F_contig102:479346..479463 | 1622927433.9868557-CDS-D-herbacea_F_contig102:479346..479463 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 479347..479463 - |
| 1690790168.3681173-CDS-D-herbacea_F_contig102:479346..479463 | 1690790168.3681173-CDS-D-herbacea_F_contig102:479346..479463 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 479347..479463 - |
| 1622927434.0033333-CDS-D-herbacea_F_contig102:479680..479786 | 1622927434.0033333-CDS-D-herbacea_F_contig102:479680..479786 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 479681..479786 - |
| 1690790168.3861382-CDS-D-herbacea_F_contig102:479680..479786 | 1690790168.3861382-CDS-D-herbacea_F_contig102:479680..479786 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 479681..479786 - |
| 1622927434.014882-CDS-D-herbacea_F_contig102:480290..480424 | 1622927434.014882-CDS-D-herbacea_F_contig102:480290..480424 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 480291..480424 - |
| 1690790168.400729-CDS-D-herbacea_F_contig102:480290..480424 | 1690790168.400729-CDS-D-herbacea_F_contig102:480290..480424 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 480291..480424 - |
| 1622927434.0259445-CDS-D-herbacea_F_contig102:482637..482704 | 1622927434.0259445-CDS-D-herbacea_F_contig102:482637..482704 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 482638..482704 - |
| 1690790168.4117122-CDS-D-herbacea_F_contig102:482637..482704 | 1690790168.4117122-CDS-D-herbacea_F_contig102:482637..482704 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 482638..482704 - |
| 1622927434.0370865-CDS-D-herbacea_F_contig102:483380..483532 | 1622927434.0370865-CDS-D-herbacea_F_contig102:483380..483532 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 483381..483532 - |
| 1690790168.4214363-CDS-D-herbacea_F_contig102:483380..483532 | 1690790168.4214363-CDS-D-herbacea_F_contig102:483380..483532 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 483381..483532 - |
| 1622927434.0498562-CDS-D-herbacea_F_contig102:484037..484085 | 1622927434.0498562-CDS-D-herbacea_F_contig102:484037..484085 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 484038..484085 - |
| 1690790168.4302824-CDS-D-herbacea_F_contig102:484037..484085 | 1690790168.4302824-CDS-D-herbacea_F_contig102:484037..484085 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 484038..484085 - |
| 1622927434.065313-CDS-D-herbacea_F_contig102:484623..484764 | 1622927434.065313-CDS-D-herbacea_F_contig102:484623..484764 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 484624..484764 - |
| 1690790168.4405637-CDS-D-herbacea_F_contig102:484623..484764 | 1690790168.4405637-CDS-D-herbacea_F_contig102:484623..484764 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 484624..484764 - |
| 1622927434.080183-CDS-D-herbacea_F_contig102:486454..486621 | 1622927434.080183-CDS-D-herbacea_F_contig102:486454..486621 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 486455..486621 - |
| 1690790168.4584472-CDS-D-herbacea_F_contig102:486454..486621 | 1690790168.4584472-CDS-D-herbacea_F_contig102:486454..486621 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 486455..486621 - |
| 1622927434.0942745-CDS-D-herbacea_F_contig102:487024..487199 | 1622927434.0942745-CDS-D-herbacea_F_contig102:487024..487199 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 487025..487199 - |
| 1690790168.4709432-CDS-D-herbacea_F_contig102:487024..487199 | 1690790168.4709432-CDS-D-herbacea_F_contig102:487024..487199 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig102 487025..487199 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig102.354.1 >prot_D-herbacea_F_contig102.354.1 ID=prot_D-herbacea_F_contig102.354.1|Name=mRNA_D-herbacea_F_contig102.354.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=397bp
GGSPVHRSEPTEGVTLRGRRNWRIFAAFARKEYPECLAIIEEQLCACNGL AEYPIYVKALIMRAQGRIQESLTLFQAATCLNPQNLANLKQVGRCLFLLG KHMAALGVYDEAQKIDSEDWEVWHNRGLCYLHLKQFERALEAFEQANSIS RHDSTYLHMGKVFRLQGKPAEALAVYEEALEFSPESPELLTTVGLLHLQQ GDNQKAFECLGNALTHDPRDAKAILAAGSIIQDNQDMDVALVKYRVSAVQ GLYVAAVACLKRALYLDPFEWIVAYNLGLVHLNTSQYASAFHHFSAAINL KPDFAASFMYLAITLARLGDFDNACSAYEKALGLDGDYLTHLNYAVTLLN NDEPERATEHFRSFKKLFQALDPDLEKDEEVVSRSQALEDALASLS* back to topmRNA from alignment at D-herbacea_F_contig102:477768..487199- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig102.354.1 ID=mRNA_D-herbacea_F_contig102.354.1|Name=mRNA_D-herbacea_F_contig102.354.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=9432bp|location=Sequence derived from alignment at D-herbacea_F_contig102:477768..487199- (Desmarestia herbacea DmunF female) GGCGGTTCGCCTGTCCACAGGTCTGAACCGACGGAGGGGGTAACGCTACG
CGGAAGGCGGAACTGGCGTATCTTTGCCGCCTTTGCTAGGAAGGAGTATC
CGGAATGTCTGGCGATAATTGAAGAGCAGCTGTGTGCTTGCAATGGTCTG
GCGGAGTACCCTATTTATGTTAAAGGTCGGTTGTCAGTATGAATAGTGTG
TTGCATGCACTTTGAGCTTCTACGGAATTTAGACAAGCAGAATAAAGCAC
CCAAGGATCCAAAACTGAACGGTTGTACCATATGCCCACCTACCTCGTGT
TGTTGTTGCTGCTGCTACTGATATTGTTGTTTTTGTTTTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTCTTCTTCTCATTTAACCGTTTT
TGCTACCCGCGACCGCCAGCACACCCAGGGAGATCCAAGTTCCATGCTAG
GTTCTTCGTACATTATTGTAGCATAAACACAACACAACCCTATCGCATCG
GGTTCACCTTGCCGCTTAAATGTCATTTGACAAGACGCTTGTCTCTTTTC
ACGTTTGTTCCGCTACGGATCTTCGCAGCTCTGATCATGCGAGCACAGGG
CCGAATACAGGAATCGTTGACGCTATTTCAGGCAGCAACATGCCTTAATC
CGCAGAACCTCGCCAACCTGAAGCAAGTGGGGAGGTGCCTCTTTCTATTG
GGAAAGCATATGGCGGCTCTTGGCGTCTATGATGAGGCGCAGAAGGTGTC
ATGTGGATTGGCACTCTTGTGAGGATGACGAGTGCCCCCGTTACTGTAGA
ACTTTCACGGCGCAGGCAGAACGAGATTCACAGAAGTCCGGTACTCGTAT
GGTTATTATGTCAGCGGCATCGTACCATGGCGTGTTTTTCAGAGTCTTTT
TGCGTGTGCTGCCAAAAGCGGATATTACGATTTTCTGCGCGTGAGTAGAA
CTACGAGGTAACCGTTGACGCTGGCAATGATAAATACGGCAATAAACACG
TCACACTACAAAAAGACACTCGTACTATGTAAGTATAAACTGGACAAAGA
CAGCGTTTCGCAGCCAGGGCGTGCTGCTTCTTCGCCTCTAGCCATTCACG
AAGAAATATCGACCACAGTACGAAAACCTCTGCGTTGCTTCATTTTGGCC
GCGGTGGGATATGAGTGCGACTATCGATACTTCTTGTCGAACAAACATTA
CCAAAAGTTCAGCACAGTGTACTACTGTAGAGGCATTTTAGAGCTCAACG
GTATGCCTTCTGCCAAAACAGTCCCATTCGTGGCCGACACCCCGGTCACA
CTATTTTGCTGCTAATATCCCCATCGGGAGGCCCCGTACCGGCAAACAGT
TTCCCCACCCGTGTTCCGACGGCATCATTTGCATTTTTGTAATAGACAGA
CTGCAACCAATGCCCACGCACGATGACCAACATTCCAGTTCACCGAGGTT
CGGAGTTTCGGATTATAGTAGAAGATACATATTTCTTTGTCGTCTTCTTC
CGTCGCGGAAAAGTGCGCGGGCGTGAGGTAGCAGACCCTGATGAAAAACA
GGAGGCTACCAAAAGTGTTGAATCCGTACACGATTAAAATCCACGACATG
AGACTGGGGAAGACACCACAAATACCGGAGACCACAACCTGTTCAGATAG
CTACGTAGGGGGGGCGTGATAATCGTGATGAAAAACAGGGAGGCCAAGCG
CATGGATTGTTTTCCTAGACATATTGGTTGTTGCCTTTCTTGCTCACCGA
GCTACCCTGCTGAGCTGTACTGCAAGCGCGAATCTGGGGGCAACGAACAC
GGCCCAACGTTATAGTATAACCCTAACTCTCACTTCACCATCACTGCTGA
AAGGGTCGCATGCTACGGTATATGCCATGGCATGCCGTGGGGGGAAGCAC
AATCCTGACAGTAGAAAACAAGGCAGCGCGGCCCGTGTATTGCTGGTTCT
GGCTCGATGTGGGCACTGGTTGGGGTTGGAAGTTTGGTTTTCAGATGTGG
TTGGGTTGAGTGCCCCGTGCTCAATACTGGTCCCAGTGTCGAGCTTGCCG
TATATCATATACTTCGAAGTAAAGGATAAAGCACTACGAGGCAAATAAGT
GGTGTGCCATTGGAGAACGCGTAGCGAAAGAATCGTGTTTGGGGCCCCAG
ACGACGGTCGTTGGTCACATCAAGGTAACATCACGATCGAATCGCTGACT
ATCGACAAGGATCTGCTGGTGTCGAGAGTATTCCATTGAGCCCAGGCGAC
ACGCGAAGATCGCTCTACGTAGTTGTTGCGTGAATCTGGGTAGGGCTTGT
TTTCGTCAGAACAGAAGAGGGGCATGGTTTCGGCACCACATATCAGCACA
GCAACGGAGAAAGTCTCGGCACCTCGGCAACTTTCATTGTCACACACTTT
TTATTTCCCTCTCGCGCGTCGTCCCATGTGGAAAGATCGACTCGGAGGAC
TGGGAGGTTTGGCACAACAGAGGACTGTGCTATCTTCACCTCAAGCAGTT
TGAGCGAGCGCTGGAAGCCTTCGAGCAGGCCAACTCCATCAGCAGGCATG
ACTCCACCTACCTGCACATGGGAAAGGTCAGCCCCCACTATTCATTATGA
TACTCCAAAATATTGATGACCGGTTGAGGAACCGTACTCGGGGATTTCTG
CTCTGTACCTCGAGGTTTGATAATGCAACAGTAGTTCATAATGCGTCGGC
TGTGTGCAATGTTGAAGGCCAAAAGCCTCATCTATAAGCGCGAATTCGGC
ACGTCGAAGAAGACGTCTCATGGAGCGTACCTTTGGGATGTCATCATTGA
TGGAACGTCCGCAACAACAAACAATCTTCTCGCAGGACGTACACACAGTC
CAAGAATTTATCGAGCAACCCACGTTGGTAGCACCGCCACTTCGGCAGCG
CGGAGTATTATAGCACAGATAAAATACCTTCTTCGAAGTATTGTCACTAT
GATACAGTAGGCTGCAGTACTCGCCGGAGCATGATTTCAGACGATGTGTG
GACAATCCAATACTTATGATTGATTGCCAAAATCGTACTCGCGCGGTAGT
GCGCTGACCGCAAGCTTGTGCTTTCCCCGTTTTCTTTTGTTTCGTCTGGT
ATTAAAATTAGTAGGTGTTCCGACTGCAGGGCAAGCCGGCGGAAGCTCTG
GCGGTGTACGAGGTGAGGTTACACCGATTTGCGGGGCTCACCACTGCTGC
ACGGCAGGCGTTGATGGAGACGTTACCGCGCACGGTCCTACTTTGCCGTA
ACCTAGGCTACATAGGAGCTGGTGAATTTACACTCAAGCATAGGTTGAAA
TCTTCCTCGCCCCCAAAGAGAGATGCAACTGCACTGTCACAGTAGCATAC
CTAAGCTGCCTGCCATTAGATTGCACTCTGCTACAATACTTAATGTAGAT
CTGGTGCATGCTAGTACGAGGCCACATGGGCAATACTGTGCCACGATGAA
TTTAATATTGGCAGGGAAAATGCAGTGCCGCGGCTTGTGGTAGTTTCGCT
TTTAACAAAAGAATAACATTTTTTCACGCTTCCATACTTTCCGTCTACCG
GCGATTTCTGTGCGGTCACGCCAGCCTTACTGCGAATACCCTACGTGGTA
CGCTTCTTTCTTTAGTTAGTTTTTGTCTGTGATCCTGACGGTACGACAAT
GTTACCGCGACTTGCAGGAGGCACTTGAATTTTCACCGGAGAGCCCGGAG
CTTCTGACCACCGTCGGATTGCTTCACCTGCAGCAGGGGGACAACCAGAA
AGCTTTCGAGTGCCTAGGGAACGCCCTCACCCATGATCCTAGGGACGCAA
AAGCGATCCTCGCCGCGGGGTGAGAGACACAACACGGAGGGAACGTATAC
CAGGGGGGGGCGGGGGGAGTAGCGGGCGACGAACGAGGGGGGGGGGGGTA
TTGTCGTCTATTTTTCTAACCTCAGCTTTAAGATCAGGCCATCAAATACG
CCACCGATGGAGGGATGGTGGCTATAGTCCCATACGGCCGGAAATGGGAG
AGGGCACAATCCCAACGCTATCGTGCTGTGCATTTTCGGTTGGGGGCTAA
GCTAACGGCGATGCCTTGCAGCGCACGGCTACCTGGCATACAGCACATAC
TTTAGCAAAGTGATGGGACAAATCGTGTCCTAGCGAACAATCTCGGCCGC
CATATATCGTCATCAACGCACCTCTGGGTGTGCTGAACAGCCATGTTGAA
AACGACACAGTGCTGTGCTGTCCCCCTCCCGAATGTCATCGCTTGTTGTA
GTCTTGTTTTTGATGGAGCATGGGTGCTCGGGTGCGATAGTAGCAAAACA
TGGAGGTGTACCGCTGTGAATGTTGTTGCAGTTTGGGTTGGCCATGCGAA
CCCATCATCACGTTACCTGGATGGAGGGCGATGCGGATCTACACATTATC
GAACGAGGGGACTAAAATATCACGCTCATACGATCTCGTCCCCTTTTTTG
TTGGTGTGTATCAACGTTTTCTTTGACATTGCTGGCTTTCGGCAGCTCCA
TCATCCAGGACAATCAAGACATGGACGTGGCATTGGTCAAGTACAGGGTG
TCAGCCGTTCAGGTAAGTGTGGTGGCAGTTCCAACGTGTATATTCCTAAC
TATTAATAGTATAGCTGCAACAGTACCTTACGAATGTTTGGCAATGGAGT
GCCCAAAATACTGCAAGGGGACTGGCGAAGACAACATGCTTGTAACAAGG
TATGATAGAGCTTTAGCCGAATTGGCTGTGTATTTTTGGCGAAGTTAAAA
CCCGATTGAAAGACCAGCATATTCATTTTTCGAAGACTTGCGCTAGTGCA
GAGATTGTCACGTATATCATACCAGTCCTAGTTGTAGAACGTATTCCATG
AGAACCTCACCCCGGACACTCCAAATATATTTGTGGAGAGTATCCGATAG
CAGGACAACTCCTTGGGAGGCTAAAATGATAGTCACACGACGACGTCTCT
AGGTTGAGCAGAGCTCGGTACGATGAACTTTAGCCTGTCGTAGGTGATGA
TTTGGTCCGTTGCGGGATCAACAACCACTGCCTATTTTGTGCACAGTAGT
GAAAGCACGATTTGTGATGTCAGTACGCTTGTGACGTTTTATGCCAAGAC
ATGCTTGATAGAAAATAGACCTATGAGAGCACCCGCGAGGTTTCATAGAG
GGGGGGGGGTACTCATTTGTTGCTTGCCTTAGTCATTTGACCATTGACTA
CGCATCCCTTTCGAGACGGACCACCGTTCCTACCCCTACTAGACACTTCC
AACGTTTGGGCGCTCTTTACGTTTTGGTCATATCTTACACAAATTTGTTT
TTGCTTATCTCATCCGCTTCTTCCTTGGGGGGGGGGGGGGGGGGGTACTC
ATTTCATGTATGACCGTAGTCATATGACCATAGACCCTCGCATCCCTACA
ATGCCGGGACGGAGCCCGTCGGGTTTTCACCGACCAGGCAGACATCGCGT
GCACCGAGCGCGAAGCGCCGTGAGGTGTTCGGCGATTCGCATGAAGGGTG
AGCTGCATCCTACTAAGAACCACTTGTGAGGCGGACTTTCTTTCATATGG
ATGACAGCTTCGAGTGAACAGTTTGTTTTCTGGTGTGGCCACTTCCAGAG
ACAACCATGGGTATACTATATAACTGCCTCGTGGGTGTCTTACCATATGT
ATATTACGTGATATTATCCCACTTGCGCGGAGTTCAGGTTCTCCAACCCG
CACAATATGATCTAACTCGACAGCCAGTCATGGTATCCCCCAAAACAACA
CAGAAAAAAAACGGTACCGTGATTGTCTAGCTCACGTAGCGAGTGGCGTG
TTTTACAGCGTCGTTGCCAACCGACGCCAACAATTTCATGGGGGGCTTCC
TTGGGGGGGGGGGGCATAAATACACTACCTTTCCAGGGACAGCTAGGCTG
CCCGCTTTTGTTCAATGATGCTGTTTCGTGATAAAATTTCTGTAGTACGG
TATCATGATTCGAGCTGGGTCCAGACGTTGGGGAGGTAACCTCCAGACTG
GATATATCGAACAATCATAACGTTGAGTGTACTTGTGCTTTACGTACTAG
TGTATGGAAGCAATCTTTCTTTAAGCGCAATAGTCTCCTACGTTGTTCGT
TGACCGTGCGCTACGCGGGGGCCTGAATATTATCGCCTCGTACAGGGTTC
GATACCGAGCGAGGTGACCGGGCCAACGTCATTTACATGTTATTTAAAGG
CGCATATGCTGGTGCTATGCGACGTCGCAACCACGCGTATCTCGTTCGGA
CGACCGGTCACGCTGTGCCACCTCTACGGGGTCGGACGCGCGTGTGCCTG
ACCAACCGACACCCTCCAGTTTCCTTCTCTCTCTTGATGCTTGTGTCTCT
TCTTTTGTCCGTTCAGACCCCCAACTCAGCGCAACTTTGGAACAACATCG
GGATGTGTCTGTTCGGAAAGGTGACTACCAAGCGAGGCATCGTCCCTGAA
AGCTGTGTGTGCGGGTATGCATAGTTGTATTGTGTGAGACCGTGCAGATG
GATGAAGGCGCCGTGAGAGCATTACGGTTGGTTTGGCTAAATTCACCAAG
TTGTTAGACACAAACATGTAAACCAAGTTATACTTGTTTGTTCGCTCGAA
CTTGGTTGCGCGTGTGCGGCAGCAATATCTACAGCCTCGAAATATTTTCC
CATTTCTCCAATCGTCCACACCCCCTAGGAAATGCCAACCGACCAATCCG
CCACTTAGTCAGTCATGTCTCCAAAAAACGCTAAATCGGCTCCGCCATGA
ATCGTGTATTCGACCAATCCGCCAGGGTTTGTACGTGGCGGCGGTGGCGT
GCCTGAAGCGGGCTCTGTACCTAGACCCGTTCGAGTGGATCGTGGCCTAC
AACCTGGGCCTGGTGCACCTCAACACGTCACAATACGCCTCTGCGTTTCA
TCACTTCAGGTGTCTTTTGCTTTTTTTGTCATTCAACCCAGGTTACTGTA
TCATACCCTGTCATAGGGTAATATTATAGCTCTACAGTATTTACGCAACG
AATGTACGTTAGGGATTGCTCGAAAAAAAGCTGCAGTAATCGCCACATGC
ACACGTTCACGGTAATTGGTATGTTTCTGTGATTTAGCTCGGTGTCTATC
GACGCTGTACAGCACGAGCTTCTCGCCTTTCCCCCCACTACACTTGATAC
GTGTTGGTTGTCCTGTGACGAAAAAAATCAGTATTCACGCGGGCACTCTT
GCTCCACATACAATAAATGGAGGCACTCGGGATCCCGCAGTCGCGGACAC
CGCTTCCTCGATTTCCCATTTCGCCAGGTTAACCCACTTCGCCAGTTCAA
CCCCCACCCTCCCCCCCACCCCCCCCTCCCTTGTCTGTTGTAAACATGAA
TCTTTTGGATCTTGATCGTTTCGGTGTTCTACCACAATACACACATGGTC
CTGTTTCCCCCAGCGCGGCCATCAACCTCAAGCCGGATTTTGCGGCGTCT
TTCATGTACCTGGCGATAACCCTGGCCAGACTGGGGGACTTCGATAACGC
CTGCAGCGCCTACGAAAAGGTCAAGAGCCTTCGTTAGTTTTTGTGGTACA
GTACCTCACAAATGACGCATTTTAGCATTAGTTACTATAGTTGCCGCCGC
GTGTTGACAATGTATAGTATTCTACCACTGATTTCGAGGAGTGCGTAGAG
GAGCTTCGCGTACGTAGCCCGAGTACTTTTTTGTAAATATTTATCTTGTG
TTCGTTTTCCGTGGATGGACTTTGCGTGTGTTACAGGCGCTCGGTCTCGA
TGGGGACTACTTGACGCACTTGAACTACGCCGTGACCCTTCTCAACAACG
ACGAGCCGGAGAGGGCAACAGAGCACTTCCGTTCGTTCAAGAAGCTCTTC
CAGGTATAAGACGAGTAGAGCTATAGCATTCATGAGGATGTCTACATGGA
ACTGGCAAAAAGAAAAACAGTGCTATACAGCAGTAGGAGATTCTACGGCA
AGGAAGATTGATATTCATCACCGTGCGCTTTCGATCGAAGCACTACGAGA
CTGGAGACGTTTGGTTTACTCTTTCGAAATAGACTGCCGATCAGTGAGTA
ACATGCTGGAAGTGTACTGTTACACTGTGAACGAGAATTCTGCCATGACT
TTGATCTCTATTGCCGTGTAGATAGGGCAGGGCCTCGGAACACTTCAATT
CCCACCAAAAAACCCTCTACAAAAATAGGGGGACGTCGCACATGACATAA
TAATGGATATTCGCTGATACACTGGGTTGTTGGAACGCGCTCTTGTGGAT
ATACTTCGAAGTATGCATACATTTCGTATCGCCCAGCGGATCGATACTAC
CTACTGGTACCGGAGTATGTTTACAGAGCAGCTCCATCAGGAGTATATAC
GAGCAAAATATGCTGCAAGTTCGATACGTAACCTGACCTGTGTGCACGCT
ATGTGTGTGACGGGGAGTTGTCTACAGCGTTTCAATGCGGAGATTGCCAA
CCCTCGCGTTACTTTGGGTATATATTGCTACTACGCCTCCTGAATATACT
TTTATGTTTTGGCCTTCTGGGATACCCAATAAAGTCATGGCAAAATCAGG
TTTCGCGTCACAACATGCAGGGAGCGATATCGATGAACAGTAGTCTGGTA
TCATCGTTGTGACATGCACTCTGGGTCGTCGTCTATCATCCCGCCTCAGC
GTATGATTTCGTCCCGTCAGTAAAGGGAATAGAGGTCGTTCGGTCCATAA
CTATCATACGAAGTACGAGTGTACGCCATATATTATCGTGAGTACATTGT
CCTGCCCTTACCCGTGATATCCATCCAATAGATCCATGGCAGTAGTCAGT
ATTGCATAACAACAACGGTTGGTCGCTATCATAGCGGCCGGTTGAACCAA
CCGTTGTGATAGCCCAACCTGGCCTAGCGAAAATCCGCACACAGTTTCGC
CGCAACGCAACACTACTGCTGTAGGAATGCGGAGACCAACAACGGTCAAT
GATTACGATATGACATTCATTTTCATGAGTGCAATGGTTGACGCTCTCCC
CCCCCCCCTACGGGATGTGTTGGAGAGGAGGACATGGGAAAGTTTGGTAC
AGTCGCGAGAAAACGGTCGATATCCTAGGAGATGGGTGGTGGCCACAAAA
CGAGAAACAGGAAGGGGATAAGACAAGCAAACGTTTTTCAGGTATTATAT
GGAAAAAACGTAAAGAGCGCCGAAATGTTGGAAGTGTCTCTGTTGGGAGT
AGGAACGGTGTGCTTCGTCTCGAAAGGGATGCGTGGTCAATGATCAAATG
ACTAAGGCAAGCAACAAATGAGTACACCCCCCGCCCGCCCTTCCCTGCCC
CCTTTTTGTCTCGTTGTATTGTCTAAACATTTTGTTGACCTCCGGCAGGC
ACTCGACCCCGACTTGGAGAAGGACGAGGAAGTGGTATCGCGCAGCCAGG
CTCTTGAGGACGCTCTCGCGAGTTTATCTTGA back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig102:477768..487199- >mRNA_D-herbacea_F_contig102.354.1 ID=mRNA_D-herbacea_F_contig102.354.1|Name=mRNA_D-herbacea_F_contig102.354.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2382bp|location=Sequence derived from alignment at D-herbacea_F_contig102:477768..487199- (Desmarestia herbacea DmunF female) GGCGGTTCGCCTGTCCACAGGTCTGAACCGACGGAGGGGGTAACGCTACG CGGAAGGCGGAACTGGCGTATCTTTGCCGCCTTTGCTAGGAAGGAGTATC CGGAATGTCTGGCGATAATTGAAGAGCAGCTGTGTGCTTGCAATGGTCTG GCGGAGTACCCTATTTATGTTAAAGGGCGGTTCGCCTGTCCACAGGTCTG AACCGACGGAGGGGGTAACGCTACGCGGAAGGCGGAACTGGCGTATCTTT GCCGCCTTTGCTAGGAAGGAGTATCCGGAATGTCTGGCGATAATTGAAGA GCAGCTGTGTGCTTGCAATGGTCTGGCGGAGTACCCTATTTATGTTAAAG CTCTGATCATGCGAGCACAGGGCCGAATACAGGAATCGTTGACGCTATTT CAGGCAGCAACATGCCTTAATCCGCAGAACCTCGCCAACCTGAAGCAAGT GGGGAGGTGCCTCTTTCTATTGGGAAAGCATATGGCGGCTCTTGGCGTCT ATGATGAGGCGCAGAAGCTCTGATCATGCGAGCACAGGGCCGAATACAGG AATCGTTGACGCTATTTCAGGCAGCAACATGCCTTAATCCGCAGAACCTC GCCAACCTGAAGCAAGTGGGGAGGTGCCTCTTTCTATTGGGAAAGCATAT GGCGGCTCTTGGCGTCTATGATGAGGCGCAGAAGATCGACTCGGAGGACT GGGAGGTTTGGCACAACAGAGGACTGTGCTATCTTCACCTCAAGCAGTTT GAGCGAGCGCTGGAAGCCTTCGAGCAGGCCAACTCCATCAGCAGGCATGA CTCCACCTACCTGCACATGGGAAAGATCGACTCGGAGGACTGGGAGGTTT GGCACAACAGAGGACTGTGCTATCTTCACCTCAAGCAGTTTGAGCGAGCG CTGGAAGCCTTCGAGCAGGCCAACTCCATCAGCAGGCATGACTCCACCTA CCTGCACATGGGAAAGGTGTTCCGACTGCAGGGCAAGCCGGCGGAAGCTC TGGCGGTGTACGAGGTGTTCCGACTGCAGGGCAAGCCGGCGGAAGCTCTG GCGGTGTACGAGGAGGCACTTGAATTTTCACCGGAGAGCCCGGAGCTTCT GACCACCGTCGGATTGCTTCACCTGCAGCAGGGGGACAACCAGAAAGCTT TCGAGTGCCTAGGGAACGCCCTCACCCATGATCCTAGGGACGCAAAAGCG ATCCTCGCCGCGGGGAGGCACTTGAATTTTCACCGGAGAGCCCGGAGCTT CTGACCACCGTCGGATTGCTTCACCTGCAGCAGGGGGACAACCAGAAAGC TTTCGAGTGCCTAGGGAACGCCCTCACCCATGATCCTAGGGACGCAAAAG CGATCCTCGCCGCGGGCTCCATCATCCAGGACAATCAAGACATGGACGTG GCATTGGTCAAGTACAGGGTGTCAGCCGTTCAGCTCCATCATCCAGGACA ATCAAGACATGGACGTGGCATTGGTCAAGTACAGGGTGTCAGCCGTTCAG GGTTTGTACGTGGCGGCGGTGGCGTGCCTGAAGCGGGCTCTGTACCTAGA CCCGTTCGAGTGGATCGTGGCCTACAACCTGGGCCTGGTGCACCTCAACA CGTCACAATACGCCTCTGCGTTTCATCACTTCAGGGTTTGTACGTGGCGG CGGTGGCGTGCCTGAAGCGGGCTCTGTACCTAGACCCGTTCGAGTGGATC GTGGCCTACAACCTGGGCCTGGTGCACCTCAACACGTCACAATACGCCTC TGCGTTTCATCACTTCAGCGCGGCCATCAACCTCAAGCCGGATTTTGCGG CGTCTTTCATGTACCTGGCGATAACCCTGGCCAGACTGGGGGACTTCGAT AACGCCTGCAGCGCCTACGAAAAGCGCGGCCATCAACCTCAAGCCGGATT TTGCGGCGTCTTTCATGTACCTGGCGATAACCCTGGCCAGACTGGGGGAC TTCGATAACGCCTGCAGCGCCTACGAAAAGGCGCTCGGTCTCGATGGGGA CTACTTGACGCACTTGAACTACGCCGTGACCCTTCTCAACAACGACGAGC CGGAGAGGGCAACAGAGCACTTCCGTTCGTTCAAGAAGCTCTTCCAGGCG CTCGGTCTCGATGGGGACTACTTGACGCACTTGAACTACGCCGTGACCCT TCTCAACAACGACGAGCCGGAGAGGGCAACAGAGCACTTCCGTTCGTTCA AGAAGCTCTTCCAGGCACTCGACCCCGACTTGGAGAAGGACGAGGAAGTG GTATCGCGCAGCCAGGCTCTTGAGGACGCTCTCGCGAGTTTATCTTGAGC ACTCGACCCCGACTTGGAGAAGGACGAGGAAGTGGTATCGCGCAGCCAGG CTCTTGAGGACGCTCTCGCGAGTTTATCTTGA back to top
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