mRNA_D-herbacea_F_contig102.334.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig102.334.1
Unique NamemRNA_D-herbacea_F_contig102.334.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: D7G657_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G657_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 3.750e-88
Identity = 169/243 (69.55%), Postives = 200/243 (82.30%), Query Frame = 1 
Query:  103 MGKKGGSGGGVNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEAKDLSGLKSVVKPKKKVDIPPWEAALVSSATSNKEKKRQEAAKRQAEADEARKAKGQRAAAESKALRDSGIQMVDDTEMEGSANPNRT-AEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIFEQ 828
            MGKKG +G GVNTKV AA EK+A          XXXXXXX  ++W++G+N+RGSKRED+AARKQ+EK +K+AAKKAL+  EA+ LSG KSVVK KKKVD+PPWEAAL+SS+ SNKEKKRQEAAKRQA+A+EARKAK +RA  E+KA+RDSGIQM DD+E+ GSANPNR  A+G    +WASGIDAAIG+LS+ G G   P + HPEKR+KAAL AYEE+ELPALKE KPGLKLRQYKQMIFEQ
Sbjct:    1 MGKKG-AGTGVNTKVQAAREKQAAVEGARAAKAXXXXXXXXXKEWSKGANQRGSKREDEAARKQEEKTSKLAAKKALQAEEAEQLSGFKSVVKTKKKVDVPPWEAALMSSSVSNKEKKRQEAAKRQAQAEEARKAKAERAEKEAKAMRDSGIQMGDDSELSGSANPNRKGADGGDGGDWASGIDAAIGSLSLEGAG---PAERHPEKRLKAALAAYEERELPALKEEKPGLKLRQYKQMIFEQ 239
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BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A6H5L325_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L325_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.150e-64
Identity = 138/211 (65.40%), Postives = 168/211 (79.62%), Query Frame = 1 
Query:  103 MGKKGGSGGGVNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEAKDLSGLKSVVKPKKKVDIPPWEAALVSSATSNKEKKRQEAAKRQAEADEARKAKGQRAAAESKALRDSGIQMVDDTEMEGSANPNRT-AEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKA 732
            MGKKG +G GVNTKV AA EK+A          XXXXXXX A++W++G+N+RGSKRED+AARKQ+EKA+KIAAKKAL+  EA+ LSG KSVV     VD+PPWEAAL+SS+ SNKEKKRQEAAKRQA+A+EARKAK +RA  E+KA+RDSGIQM DD+++ GSANPNR  A+G    +WASGIDAAIG+LS+ G G   P + HPEKR+KA
Sbjct:    1 MGKKG-AGTGVNTKVQAAREKQAAVEGARAAKAXXXXXXXXAKEWSKGANQRGSKREDEAARKQEEKASKIAAKKALQAEEAEQLSGFKSVV-----VDVPPWEAALMSSSVSNKEKKRQEAAKRQAQAEEARKAKAERAEKEAKAMRDSGIQMGDDSDLSGSANPNRKGADGGDGGDWASGIDAAIGSLSLEGAG---PAERHPEKRLKA 202
[Close]
BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A836C7X5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X5_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.480e-21
Identity = 87/233 (37.34%), Postives = 120/233 (51.50%), Query Frame = 1 
Query:  130 GVNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEAKDLSGLKSVVKPKKKVD-IPPWEAALVSSATSNKEKKRQEAAKRQAEADEARKAKGQRAAAESKALRDSGIQMVDDTEMEGSANPNRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIFE 825
            G+NTKVA+A EK+A                 EA +WA+G++ RG+ R                    L+  +   L+ +K   K K K   + PWEAAL   +T  K+ + Q   +R+AE    RKAK + A         +G  +VDD+E+    N NR     +  +WASG+D A+  LS+G +G G   D  PEKRMKAA   YEE  LP ++E KPGLKL QYKQ+IF+
Sbjct:    6 GINTKVASAKEKQAALDAQRDAAKAAEAERKEAAEWAKGADARGAGRAXXXXXXXXXXXXXXXXXXXLQAEDEAALAAVKPKGKAKAKAPALKPWEAALAEGSTGKKKTRFQLEQEREAE----RKAKEEAAVK-------AGEVVVDDSEI--MENTNRM----MGEQWASGLDGALQELSIG-KGPG--TDKFPEKRMKAAYRVYEEANLPVMREEKPGLKLSQYKQLIFK 218
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BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A1W0A1D2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1D2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.620e-18
Identity = 95/237 (40.08%), Postives = 127/237 (53.59%), Query Frame = 1 
Query:  133 VNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKR--EDDAARKQDEKAAKIAAKKALEDAEAKDLSGLKSVVKPKKKVDIP-PWEAALVSSATSNKEKKRQEAAKRQAEADEARKAKGQRAAAESKALRDSG---IQMVDDTEMEGSANPNRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIFE 825
            VN+K AAANEKKA         XXXXX   EA DWAQGSN RGSKR  ED+  R+Q +  AK A  K L++A+   +SG+KS  K K + D+  PWE AL  +   + +  R            ++ A   R  AES   + +G   I   DD E+    N NR    +L    A+ ++ A+  LS   +G+    + HPE+R KAA  A+EE  +P LKE  PGLKL QYKQ + +
Sbjct:    7 VNSKAAAANEKKAVNEAEKSKKXXXXXEAAEAADWAQGSNARGSKRVQEDELRRQQAD--AKKAELKRLQEADEAVVSGVKSKTKTKAQKDMDKPWELALEPTGKKSNKGSR------------SKPASAPRVIAESVPAKPAGRHDIIFNDDIELH--ENKNRVVSDALE---ATTVEDALALLSTDDKGS----ERHPERRAKAAYKAFEEATMPQLKEDYPGLKLSQYKQRLSD 220
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BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A7S2JXS9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXS9_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.000e-16
Identity = 98/278 (35.25%), Postives = 125/278 (44.96%), Query Frame = 1 
Query:  127 GGVNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEAKDLSGLKSVVKP----------------KKKVDIPPWEAALVSSATSNKEKKRQEAAKRQAEADEARKAKGQR-------------------AAAESK------ALRDSGIQMVDD-----TEMEGSANPNRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIF 822
            GGVN KVA AN KKA                   ++W++G+N RG+ R +  A K +E+  K   K AL  AE  +L+G   V K                 KK  D+   E ALVS A                    A+KAK  +                   AA E +      A  ++ I  +DD     T  EG A   R A  ++A   ASGIDAA+G LSV    +GG  DAHPEKRMKAA L +EE+ LP +KE  PGL+L QYK+ IF
Sbjct:    6 GGVNEKVAKANAKKAANQAVKDAQAATQRENEARQEWSKGANNRGAARAEAEASKLEEQRRKREQKAALMAAEEAELAGASGVKKAVGSGQKAKAAGKKKSKKKDNDLSLLEDALVSGADKK-----------------AKKAKADKLXXXXXXXXXXXXXXXXXXAAQEGQYVDPLMANTNAMIGNMDDMDHPDTNGEG-ALVGRAANRAIAEMGASGIDAALGTLSV----SGGKPDAHPEKRMKAAYLEFEEKMLPIVKEEYPGLRLSQYKEKIF 261
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BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A1V9YGK1_9STRA (HMG box domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGK1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.420e-15
Identity = 82/237 (34.60%), Postives = 115/237 (48.52%), Query Frame = 1 
Query:  127 GGVNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEAKDLSGLKSVVKPKKKVDIP-PWEAALVSSATSNKEKKRQEAAKRQAEADEARKAKGQRAAAESKALRDSG---IQMVDDTEMEGSANPNRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIFE 825
            G +N+K AAANE+KA                  A +W+QG+++R SKR  +   K+ +  AK A  K L++AE   LSG+K+  K K + D+  PWE AL      N +  R            A+ A   R  AE    R +G   I   DD ++    N NR    +L    A+ ++ A+  LS   +G     + HPE+R KAA  A+EE  +P LK   PGLKL QYKQ + E
Sbjct:    6 GNMNSKAAAANERKAANDAEKNKKKAAQAEAALAAEWSQGADQRSSKRAQEEEMKRQQADAKKAELKRLQEAEEAALSGIKAKGKSKAQKDMDKPWELALEPVGKKNNKGSR------------AKPASAPRVIAEPAPARPAGRHDIVFNDDLDLH--ENKNRATSDALE---ATTVEDALALLSTDDKGN----ERHPERRAKAAYKAFEEATMPELKADYPGLKLSQYKQRLSE 221
[Close]
BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A067CNC9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNC9_SAPPC)

HSP 1 Score: 82.0 bits (201), Expect = 7.490e-15
Identity = 90/237 (37.97%), Postives = 125/237 (52.74%), Query Frame = 1 
Query:  127 GGVNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEAKDLSGLKSVVKPKKKVDIP-PWEAALVSSATSNKEKKRQEAAKRQAEADEARKAKGQRAAAESKALRDSG---IQMVDDTEMEGSANPNRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIFE 825
            G +N+K AAANE+KA       XXXXXXXXXX   +WAQG++ RGSKR+ +   K+ +  AK A  K L++     LSG+K+  K K   D+  PWE AL  +   + +  R            A+ A   R  A+    R +G   I   DD ++    N NR A  +L    A+ ++ A+  LS   +G     + HPE+R KAA  A+EE  +P LKE  PGLKL QYKQ + +
Sbjct:    6 GNMNSKAAAANERKAANDAEKNXXXXXXXXXXXXAEWAQGADARGSKRQQEEELKRQQADAKKAELKRLQEXXXAALSGVKAKAKTKNMKDMDKPWELALEPTGKKSNKGSR------------AKPASAPRVVADPAPARPAGRHDIVFNDDIDLH--ENKNRHASDALE---ATSVEDALALLSTDDKGN----ERHPERRAKAAYKAFEEATMPQLKEDYPGLKLSQYKQRLSD 221
[Close]
BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A2D4CES5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CES5_PYTIN)

HSP 1 Score: 76.6 bits (187), Expect = 9.000e-13
Identity = 85/252 (33.73%), Postives = 118/252 (46.83%), Query Frame = 1 
Query:  115 GGSGGGVNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEAKDLSGL-------KSVVKPKKKVDIPPWEAALVSSATSNKEKKRQEAAKRQAEAD--------EARKAKGQRAAAESKALRDSGIQMVDDTEMEGSANPNRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIFE 825
            GG  GGVN+KV AAN KKA A               EA +W++G++ RGSKR ++               K ++  E   +S +       KS  K KK+++ P WE AL  +   N +  R       A A+        +A+K   +  AA+  A R  GI     TE     N NR A+       A  +DAA+  LS+  +     ++ HPE R KAA  A+EE  +P +KE  PGLKL QYKQ IF+
Sbjct:    2 GGKKGGVNSKVEAANAKKAAAQAVKDGKARAAAEAAEAAEWSKGADARGSKRREEXXXXXXXXXXXXXELKRIQALEEHAMSKVEDKNAIRKSKTKDKKELNKP-WEEALKPAVKKNNKGSRTTPTPPAAPANGKVTQAMIQAKKDAEEARAAKEAADRAKGISFATYTE-----NRNRAAD---VDGEARSLDAALDVLSMDDK----DLEKHPEXRAKAAYKAFEEAMMPQMKEDYPGLKLSQYKQRIFD 240
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BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A485LFC7_9STRA (Aste57867_20086 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFC7_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.610e-12
Identity = 82/237 (34.60%), Postives = 112/237 (47.26%), Query Frame = 1 
Query:  127 GGVNTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEAKDLSGLKSVVKPKKKVDIP-PWEAALVSSATS-NKEKKRQEAAKRQA--EADEARKAKGQRAAAESKALRDSGIQMVDDTEMEGSANPNRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIFE 825
            G  N+KV AAN +KA                  A +W+QG++ R +KR  D   K+ +  AK A  K L++ E   +SG+K+  K   + D+  PWEAAL   A   NK K     A ++    A  AR A       + ++  D+  Q           N NR    +L    AS ID A+  L V  +      + HPEKRMKAA  A+EE  +P LKE  PGLKL QYKQ + +
Sbjct:    6 GNTNSKVEAANARKAVQEAEKGKKKAAQNEAATAAEWSQGADARSAKRAQDDELKRQQADAKKAELKRLQEEEEAAMSGIKAKAKTTAQKDLDKPWEAALAPVAKKGNKGKSAPPPAPKKVVEPAAPARPAGRHDIVFDERSDEDAFFQ-----------NKNRLQTDALE---ASSIDEALNMLGVNDK----DPERHPEKRMKAAYKAFEEVTMPQLKEDYPGLKLSQYKQRLSD 224
[Close]
BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Match: A0A024GR38_9STRA (PHD-type domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GR38_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 5.020e-12
Identity = 83/239 (34.73%), Postives = 112/239 (46.86%), Query Frame = 1 
Query:  136 NTKVAAANEKKAQAXXXXXXXXXXXXXXXEARDWAQGSNKRGSKREDDAARKQDEKAAKIAAKKALEDAEA----KDLSGLKSVVKPKKKVDIPPWEAALVSSATSNKEKKRQEAAKRQAEADEARKAKGQ---RAAAESKALRDSGIQMVDDTEM--EGSANPNRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYEEQELPALKEAKPGLKLRQYKQMIFE 825
            NTKV AAN +KA +                A +W++GSN R  KR                 KK LE  E     +D S ++ +   +KK  + PWE AL SSA  N +  R  +     + +E  K   Q   +AA E +A+  S     +D +   EG  NPNR  +     + A  IDAA+  LS+    A   +D HPE+R KAA  A+EE  LP LK   PGLKL QYKQ + +
Sbjct:    7 NTKVEAANARKASSKAVKDAQKAAKSEAETAEEWSKGSNSRAEKRXXXXXXXXXXXXXXXXEKKRLEALEEHSLEEDKSSIRKLKAKEKKEAVKPWEDALKSSAKRNNKGNRNPS-----QVNEPSKKMTQAMIQAALEKEAMTQSKQAGKNDIQFAKEGLINPNRQPK---TVDEARSIDAALDVLSISKNDA---IDRHPERRAKAAYKAFEEVTLPELKLEFPGLKLSQYKQKLSD 234
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig102.334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G657_ECTSI3.750e-8869.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L325_9PHAE1.150e-6465.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C7X5_9STRA4.480e-2137.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1W0A1D2_9STRA1.620e-1840.08Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2JXS9_9STRA7.000e-1635.25Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1V9YGK1_9STRA5.420e-1534.60HMG box domain-containing protein n=1 Tax=Achlya h... [more]
A0A067CNC9_SAPPC7.490e-1537.97Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A2D4CES5_PYTIN9.000e-1333.73Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A485LFC7_9STRA2.610e-1234.60Aste57867_20086 protein n=1 Tax=Aphanomyces stella... [more]
A0A024GR38_9STRA5.020e-1234.73PHD-type domain-containing protein n=2 Tax=Albugo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig102contigD-herbacea_F_contig102:27012..34303 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score277.7
Seed ortholog evalue5.8e-72
Seed eggNOG ortholog2880.D7G657
Preferred nameCCDC124
KEGG koko:K02357
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003712,GO:0003713,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010556,GO:0010557,GO:0010604,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032774,GO:0033554,GO:0034599,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0060255,GO:0065007,GO:0065008,GO:0070887,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:0098771,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2001141
EggNOG free text desc.cell division
EggNOG OGsKOG3223@1,KOG3223@2759
Ec32 ortholog descriptionProtein of unknown function DUF1014
Ec32 orthologEc-11_005260.1
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012,ko03029
Exons4
Model size830
Cds size828
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig102.334.1prot_D-herbacea_F_contig102.334.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig102 27012..34303 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927431.1955194-CDS-D-herbacea_F_contig102:27011..273891622927431.1955194-CDS-D-herbacea_F_contig102:27011..27389Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig102 27012..27389 +
1690790166.4895134-CDS-D-herbacea_F_contig102:27011..273891690790166.4895134-CDS-D-herbacea_F_contig102:27011..27389Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig102 27012..27389 +
1622927431.2054658-CDS-D-herbacea_F_contig102:30340..304661622927431.2054658-CDS-D-herbacea_F_contig102:30340..30466Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig102 30341..30466 +
1690790166.5012739-CDS-D-herbacea_F_contig102:30340..304661690790166.5012739-CDS-D-herbacea_F_contig102:30340..30466Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig102 30341..30466 +
1622927431.2199388-CDS-D-herbacea_F_contig102:31684..319121622927431.2199388-CDS-D-herbacea_F_contig102:31684..31912Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig102 31685..31912 +
1690790166.5083988-CDS-D-herbacea_F_contig102:31684..319121690790166.5083988-CDS-D-herbacea_F_contig102:31684..31912Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig102 31685..31912 +
1622927431.2297492-CDS-D-herbacea_F_contig102:34207..343031622927431.2297492-CDS-D-herbacea_F_contig102:34207..34303Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig102 34208..34303 +
1690790166.5209522-CDS-D-herbacea_F_contig102:34207..343031690790166.5209522-CDS-D-herbacea_F_contig102:34207..34303Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig102 34208..34303 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig102.334.1

>prot_D-herbacea_F_contig102.334.1 ID=prot_D-herbacea_F_contig102.334.1|Name=mRNA_D-herbacea_F_contig102.334.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=276bp
PPPELRISSVITTDDLCNPTTAKLISIVRQHCTIMGKKGGSGGGVNTKVA
AANEKKAQAAGAKAAKAAAAQEAAEARDWAQGSNKRGSKREDDAARKQDE
KAAKIAAKKALEDAEAKDLSGLKSVVKPKKKVDIPPWEAALVSSATSNKE
KKRQEAAKRQAEADEARKAKGQRAAAESKALRDSGIQMVDDTEMEGSANP
NRTAEGSLAREWASGIDAAIGNLSVGGRGAGGPVDAHPEKRMKAALLAYE
EQELPALKEAKPGLKLRQYKQMIFEQ
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mRNA from alignment at D-herbacea_F_contig102:27012..34303+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig102.334.1 ID=mRNA_D-herbacea_F_contig102.334.1|Name=mRNA_D-herbacea_F_contig102.334.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=7292bp|location=Sequence derived from alignment at D-herbacea_F_contig102:27012..34303+ (Desmarestia herbacea DmunF female)
CCTCCCCCAGAACTGAGAATCTCCAGCGTCATCACAACAGATGATCTTTG
CAATCCGACCACTGCCAAGCTGATAAGTATTGTGCGACAGCATTGTACCA
TCATGGGAAAGAAAGGGGGTAGCGGTGGTGGAGTGAACACCAAGGTCGCG
GCCGCCAACGAAAAAAAGGCTCAGGCAGCAGGCGCGAAAGCGGCGAAGGC
GGCAGCCGCCCAGGAAGCGGCTGAGGCGCGAGACTGGGCGCAAGGATCCA
ACAAAAGGGGGTCTAAGAGAGAGGACGATGCCGCTCGCAAGCAAGACGAA
AAAGCGGCCAAGATTGCGGCGAAGAAGGCACTGGAGGATGCCGAGGCGAA
GGATCTCTCGGGCCTCAAGTCTGTCGTGGTGAGGAAAAGCATCGTGACAG
CAGACCAAGAGTACTAAGACTAGACTTTGTATCGATGTAGCAGTTCGATG
TTGCATTCATTCTCTGTGCATGCCCACAACAACAAACAGTAGGTATCTAG
TCCAAGTAGGCCTACAGCTCGGGTCATGGTTGCGAGACGCAAGTTTGGCA
GTTTGGCAGACTGCAGATTTCTTGGACGTTTGTGCCACACTATCCGTTGC
ACTCTACTTGAGCACCACTACTGCGAGTACTACAAGACTGTGCTTTTTTA
TTTTAGAGCTTTTATTGTGTGTTACGCTGTTACGGTTGCGCCGCGTTTTT
GGGTTCATCAATGCAATGCATCAATGCATCCACGCGACCGATGTATCACA
CAGTAGTAGTAGTAGTAGTAGTAATAGTGAGGCTGACGATTATCCCCTGG
GGCCCCCGAGCCAGTTTGGAACGTCACGGCTGATGTATACTTAAGCAAAA
ATAACCAATGCCATGTTTTTTTTGCGCTTTGTACGAGTACCTGCTGTGTT
GAATGATGAGTGATGCCTTTTTGAATACTCTGGAGCTACATATTGCAAAT
GTGCATTACTATCATTGTTGTCTGTTGTGGACCAGTCGCGCATCCAGCAC
TCCTCCACACAACCACAAGTAACCGATACCCTTTCGCTCCACTAAATACA
ACAAAAGGTCCAGTCGGCCATCGGGAATTTATATGCAGTATGCACAACAG
AGAACAGAACACTACTACTGTTGTTATACACTCAAGAGCTCAGAACCACG
CGGTACGTTCCTTGTGTTCCGTGTGACCTTCCGTGTATTCTCAAGAACTA
AAACGCCGCTATTCTAGAAAACCTGCTCATCTTTATTTTCCTTACGATAT
CAGCTACCCAAAATAAAAATATTACAACTGCCATACACATGGGAGAGGGG
GAACGCTCTACCTGTGTACAATTTTGAGCGGTTTCAATCGAAAACAGAAA
GCGCCTACGTACCAGTACATCATTTAGTAATACGATCAGGTATAGTACGA
CGAAGGGCCCCGCTGTTTGTTCCAAGGGACGCCTTCCCCCCCCACACACA
CCCCCAAAATGAGGGtTTGGGGGGGGGCGGGGGGGGGGGGGGGTCATGCA
GCAATTAACCCCGGGGTTTGTACGGCATGATGTAGTACAGCGGGGTACTC
GTGCATGCCTGGTGCAGAGAGAGCAGGAGATCCAGCAAAAGGGGCAGAAA
ATAATAGTTTGGTGGGAACGGGATTTGCATCTTCTCTGTACAATATGCAT
GCACCCCAATTGTCACTCTCACACCGCGTTCCGTGCTGTTCCATCGGAGG
ATGAGAGCGCGCTTTGCCGCATCGATGATCCATTAACTACATCGAAAGCA
ACTGTTGTTAGTAATACAGTAACATAACTGTCGTTAAAAGGCAGGCAAAA
AAAATACCTCGCTTCGCTCGGCATTTTTCGGCTCTGCAAGAGACTAACTA
ACCCGTTAACGGTCGCGCCCGCCCCCTCCGTGGTGTAGTCGTTATCGACG
CATGTGTGGCATGTACACGTATTTCCGTCTCACTATGTTATACCACGTAG
TATACACTGGTTACTAGTTCTACCGGTACTATCATATCATCATGTTATAC
ACAACCTGGTATACTACTGACTGTGTAGAGTTATGTGCATTAAATACGCA
TCGATAGTGCAGTGTTTTAGAGCTGTCGAAGTAGGGCTATCGATATCTAG
CTGTCAAATGGCGGCTTGTGGGCTCCGTGCTGTGCTGCCATTGCTGCCAT
TGTTGGTCAAATTTATTGCGCAGGAGAACACGCTGCGTGGTGTGGTGTGT
TTGTTGTATGCGGTGGGGAAGCAGGAAACATGCCGATAAAATACATTGTG
TCCTCTCGCACGAACGGCACCCTTTGAATTATTGTGCGCTCTTTTGGACA
GAAACAAGAGAACACACACACGAAAAAACTCCGGCTGTTTTGGAGGGCTC
TGTGTATTTTGTTTTGCGCATCTTCGGACAAAAACAAAGAAGAAAAAACA
CACGAAACTCCGTTTTTTCTCGGTCGCGGGGCCGTAGACCCGGGCCCGCA
TCTTGCAGATCCCCAATGCCACACGTCGATGCCACCGCGATGGACCCCAC
CTCCCCCAAAATACGCCATGATGCTTTATTTTGGTGCACTTGTTGTTAGT
GAAGGATCTCAGACTGCCGCACTCTCGGGACTCGGGGGCAATGCTGTAGT
CTACTGTATCCTGGTAGGTAAGGTGTATTATACAGTATCGGTCCGCGAGT
ATAAAACAGCTATTATTTGATAGTAATGGTAGGTAGTAGCTATTTCGAGT
GAGTTAAGGCTCAAAAAAACGTACTGAGACTCCAACGCGTTGAGCTTAGG
CTCTTTTAGGCTATTGTTTAGGATTGTTTAGGCTGGCGCTCCCCGCTGAG
CGCACACAGTTTATTGCGCACATTTCCTTAAAACACGGTCCAAGAAAACT
TTAAAAAAAAAAACGAGATGGGGATGATTTACTGGGTTTTGTTTCTTACT
CGCTGGACGATACTGTTTGTACCTTGAAGTATACTGTTTGTGGACTTTAT
CGACGACAGATTAGACAACAGAGCAACCTTGACTCCCCTGCTTCGGCCGT
GACACGCACCACCGCCCAGCAGTATTAACACACCTATCATGTCGACCGGG
TATTTCGGGGGGTTGATGCGCCCCTCTGTTGCTATTGTGTAATTCGTTAG
GTTTGGGTTCCAGGGTTTTAGTTGAATACTTCGTATTAGAAAGGAAAATT
GGTCCAAACTGCTCGACAGCCTGCATATGGTACGTTGGTGAGCTTAGCAT
AAAAAAAAACAACATACATACTACAGATCCGGTCGATAGTTGTGTAAAGG
GGTCGTTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGTGGCCGTGA
CTGTCATTTGTTGTGATGCTGGCACACAGAAACCGAAGAAGAAGGTGGAC
ATACCGCCGTGGGAGGCAGCCCTGGTATCTTCGGCTACGTCGAACAAGGA
GAAGAAGAGGCAAGAGGCGGCGAAACGACAAGCGGAGGCGGACGAGGCCC
GTAAGGTGTGTGGCGTTGTTCTGTTGCTTGCCTTAAGTCATTTGACCATT
GACCACGCATCCCTTTTTTCTTTGGGGGGGGGGGGGGGGGGTACTCATTT
CATGCATGGCCGTGGTTGTATGACCGTAGACCCCCTCGCATCCCTACAAT
GCCGGGACAAAGCACGTCGGGTTTTCACCGACCATGCAGATATCGCGCGC
ACCAAGCGCGAAGCACCGTGATGTGTGAGGCGATTCGCATGAAGGGTGAG
CTGCATCTTACAAAGAACTACTTGTGACGCGGACTTTGGCACCTTGTGCG
TACTTTCTTGCATATGGATGACAGCTTCGAATTAGTTAATTTGTTTTCTG
GTGTGGCCTCTTCCAGAGAAAGCAATGGGTATACTATGTAACTGCCTCGT
GGGTGCCTTACCATATACCTGGTACGCGCTTCGTGATACCATCCCACTTG
CGCGGAGTTGAGATTCTCCACCCCGCACAATATTGTCTAGCTCGACAACC
AGCCACGGTAACCACCAAACGAAATGAAACGGCGCCGTGGTTGTCTAGCT
CACGTAGCGAGTGGCGTGTTTTACAGCGTTGTTGCCAACCGATACCTCCC
CCAAACGAGGAGGGGGGGGGGTAGTCGATGCTTTATCGCGGAAGTCAAAG
TCATCCACTTCACGCTGGTGTTTTCATATTTCCGGTCCGAGAGCGATGCA
TTTGACATTCGTAGACAAGATGGCATCGTGTGCCACGCCCAGACTCGTGC
GCCGTCGATGTCCTGACATACCGTGACTGTCGGTACACCGTCGGTACCTT
TCGAGGTTCCGTCGGTTACGAGGCAATGGTACCCGTGTAAAGTAGTGGTA
GCACGGCCGAAAGGCTAGTTGGGGCAAGGCAAGGTAAGGCAAGGTAAGGC
AAGGCAAGGCAAGGCAGTATGTTCATGGCTACATAGCCTACCCCCACTCC
CCCTATCCATCTTTCCCCACCCACAAGTGGAGGATACGTAATACGCAATA
CGCTTTGGTACACTTCGGTGGTAAAAAGTTTATTATGTGTGTGTGTGTGT
TTTGTGTGTGTTGTGTTACAGTACTCTCTGTTTTTTTTTTTTCTCTCTTT
GAGGTTTTTCCTTTTTCTCATATAGTTTTGGCAATAAACTTAATACTTTC
AGGTATAAAACAAATTGCACCATTTGAATGCCATAATAACGCACAAAAAA
CAACATAACAACACATGCGACAGGCGAAGGGCCAACGAGCGGCGGCGGAG
TCCAAGGCCCTCCGAGACTCGGGCATCCAGATGGTGGACGACACGGAGAT
GGAGGGAAGCGCGAACCCCAACAGGACCGCGGAAGGGTCGCTCGCGAGGG
AATGGGCGAGCGGCATCGACGCCGCCATTGGCAACCTCAGCGTGGGTGGC
CGCGGCGCTGGTGGGCCGGTCGATGCGCACCCGGAAAAGCGAATGAAAGC
GGTGAGTGGAGCATTTGCGAAGAACTGCTGGGATTTGGAGGGGGGAAGGG
GTAGTACTTATTTCATGCATGGCCGTCGTCGTATGACCATCGATCCTCGC
ATCCCTACAATGCCGGGACGGAGAACATCGGGTTTACACCGACCAGGTAG
AGGAAGAGGGATGCTCGTTTACTGCTTTTGACTTAAGTCATTTGACCATT
GACCACGCATCTCTTTCGAGACGGAGCACCACCGTTCCTACTCCTAATCA
GAGACGCCTCCAACATTTGGGCGCTCTTTTTACGTTTTTGCCCTAGCTTA
ACATAAAAAATGTTTTACCGCGATTTTGGGATAGAGGAGAAATCTTGGAT
GGAGGCAGCTCGTAGAGGGGGGTGGCGTACTACCGTAGAGGAAGGAGCCA
CTAGGTATATGGCCGACTGGTTCGCAGCTAACAGCCGCGAGACACGCGAA
CGACGCGCGCGTGAACTGTTCGCTGTGTTGCCGTCCGCCTCCTAAGACGC
ACTAAGCACCCGCCCCCTTGTGAAACACGTACCCAATATTTAATTGTCTT
CGCTGTGTTCGTGTTTGCTTGTTTTCTGTAGTTCGTGTTTTTCTGTTCTC
TTGGCCCTTATGCTTTTTTCCCAGACACGGACAAGATGGAATCGGTGGGA
GGGGGTGGATTGCAATCCGTAGTACCTGTCCAGTGTCTTGGTTTTATTTG
TGCTCTGGTTGTGTTTCGGTTTTGTTCGTTTTACTCGTTTTTATTTTTAT
TTTTGTTGTGTATCCCTGTTCTCTTAGCCACTGTTATCTCCCAAGTCTTG
GATGATATTAAATCAGTGGGGGTAGATTGAGTCTGTTTGTGGAGAGGGGC
AGGTGGGGTCGGTTTTATTCGGTAAAGAAAAGGTGCCTACCTTTGTGACC
ACGGGTCCGCGCGATCAGGCTAATGTGACGGAAAATCAATAAATAAATAA
AATACTTATCGTATTCCCTTCCTTGTGTGTGGCCGCCATCTATCTTCTAG
GATAGCGATCGTTTTTCTCCCGATTTTGTAGGCTGCTGCCAAACTTCTCG
GGGGGGGGGGGCAATGCAGGCATATGGTGTGTATGGTGTCCATGGCGGGA
AGACGCGGGAGTAGCAGCGGCGCCAGCGTGTGTATGTATGTTTGTCGTTG
TTGTTGTTGCTGCTGCTGTTGTTGTTGTTGCCCCATAGCGAGAGAATAGT
ACGAACCCTTGTTTTAGTTTCGAACCCGGGGTCACGACTCACGACAGAGA
CAAACACAATCATAACACGTGTCTCCTCCACCGCCACCACCTACTCTCAG
GCCTGCCTTGGACTTTGTATCGCGCTCTGGCTTGCGCGCTCACCCCTCCC
CCTTTTGGTCTGCTCGTGGACGTGGGACACATTTATTTTATAGCATCACG
CCCCGAAAATATTGAAGGGTGGGTGGACGGGAGAGTATTTGAGGGCTCTT
TTTGAGAGCTGTTGTACGTATATCACGGCTTTACAGTTGGAGCTTCTGCA
ATATATACTGTAGCTAAATGTAGCGGTTTTGGTGTCTTGTGTATCTAGAT
CGGCAAGGTGTAGAGCTGTATGACATATTACGACTGGCGTTCTCCCAGAG
GCTTTTTGGGGGCGGGAGGTTCTTGCGAGAAGCGGTTGTTTGTATTTTAA
GACACCTGACGGCGAGAGTGCATCGTGGTCGCATGCCCTATCTGTGTTGA
CTTATAAGGTCGAAATGATTGTGATCGCGCGGCGGAATTGACGCTTTCCT
TTGTGCGACCGTGAATCCTGTAGACTGTATCATTAGGCTCGCTCGTGCTG
CGAATACAACATTTCGGGATTCGTTCATCATGCGTTTGTGCATGCATGCA
TGCATGCATAGCTTGCTTGGTTGCTTGCTGAGCACATGCTAGATTGTAGA
TCCGAGCAGCCCTACTAGACTACACCTACATGTTCAATTGCAAAAAACGA
AATAGCAGCCAGGAGGGGACGTTCCAAACTGGCGGCGCAGGATTGAGGGT
GCTTGTTTTGTACTCCGCGTTGACTATCGATAGATATTATGTGTGTGATG
CGTTATTTTATTTTATTTTGTGAACATAGTCTCGATAAACTACTGTACTA
TGATACAGCTTATAGTCTCTATTCAGTAGCTGTACACTTTGTACTTGAAG
GTAGTACTGTAGTTTTAGTGTGCCGTTTTTTTTGTTTTGCTGCTCATTTT
TCTCGATTCTATCTAGGTTTTCCATACGGATATAATATCGATATTTGCAT
TGGCGTCTGTTTTGTGTGTTGCATGTGTGTGTGTGTGTGTGTTCAGGCGC
TTTTGGCGTACGAGGAACAAGAGCTGCCAGCCCTGAAGGAGGCGAAGCCG
GGATTGAAGCTGCGGCAATACAAGCAGATGATTTTCGAACAG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig102:27012..34303+

>mRNA_D-herbacea_F_contig102.334.1 ID=mRNA_D-herbacea_F_contig102.334.1|Name=mRNA_D-herbacea_F_contig102.334.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1656bp|location=Sequence derived from alignment at D-herbacea_F_contig102:27012..34303+ (Desmarestia herbacea DmunF female)
CCTCCCCCAGAACTGAGAATCTCCAGCGTCATCACAACAGATGATCTTTG
CAATCCGACCACTGCCAAGCTGATAAGTATTGTGCGACAGCATTGTACCA
TCATGGGAAAGAAAGGGGGTAGCGGTGGTGGAGTGAACACCAAGGTCGCG
GCCGCCAACGAAAAAAAGGCTCAGGCAGCAGGCGCGAAAGCGGCGAAGGC
GGCAGCCGCCCAGGAAGCGGCTGAGGCGCGAGACTGGGCGCAAGGATCCA
ACAAAAGGGGGTCTAAGAGAGAGGACGATGCCGCTCGCAAGCAAGACGAA
AAAGCGGCCAAGATTGCGGCGAAGAAGGCACTGGAGGATGCCGAGGCGAA
GGATCTCTCGGGCCTCAAGTCTGTCGTGCCTCCCCCAGAACTGAGAATCT
CCAGCGTCATCACAACAGATGATCTTTGCAATCCGACCACTGCCAAGCTG
ATAAGTATTGTGCGACAGCATTGTACCATCATGGGAAAGAAAGGGGGTAG
CGGTGGTGGAGTGAACACCAAGGTCGCGGCCGCCAACGAAAAAAAGGCTC
AGGCAGCAGGCGCGAAAGCGGCGAAGGCGGCAGCCGCCCAGGAAGCGGCT
GAGGCGCGAGACTGGGCGCAAGGATCCAACAAAAGGGGGTCTAAGAGAGA
GGACGATGCCGCTCGCAAGCAAGACGAAAAAGCGGCCAAGATTGCGGCGA
AGAAGGCACTGGAGGATGCCGAGGCGAAGGATCTCTCGGGCCTCAAGTCT
GTCGTGAAACCGAAGAAGAAGGTGGACATACCGCCGTGGGAGGCAGCCCT
GGTATCTTCGGCTACGTCGAACAAGGAGAAGAAGAGGCAAGAGGCGGCGA
AACGACAAGCGGAGGCGGACGAGGCCCGTAAGAAACCGAAGAAGAAGGTG
GACATACCGCCGTGGGAGGCAGCCCTGGTATCTTCGGCTACGTCGAACAA
GGAGAAGAAGAGGCAAGAGGCGGCGAAACGACAAGCGGAGGCGGACGAGG
CCCGTAAGGCGAAGGGCCAACGAGCGGCGGCGGAGTCCAAGGCCCTCCGA
GACTCGGGCATCCAGATGGTGGACGACACGGAGATGGAGGGAAGCGCGAA
CCCCAACAGGACCGCGGAAGGGTCGCTCGCGAGGGAATGGGCGAGCGGCA
TCGACGCCGCCATTGGCAACCTCAGCGTGGGTGGCCGCGGCGCTGGTGGG
CCGGTCGATGCGCACCCGGAAAAGCGAATGAAAGCGGCGAAGGGCCAACG
AGCGGCGGCGGAGTCCAAGGCCCTCCGAGACTCGGGCATCCAGATGGTGG
ACGACACGGAGATGGAGGGAAGCGCGAACCCCAACAGGACCGCGGAAGGG
TCGCTCGCGAGGGAATGGGCGAGCGGCATCGACGCCGCCATTGGCAACCT
CAGCGTGGGTGGCCGCGGCGCTGGTGGGCCGGTCGATGCGCACCCGGAAA
AGCGAATGAAAGCGGCGCTTTTGGCGTACGAGGAACAAGAGCTGCCAGCC
CTGAAGGAGGCGAAGCCGGGATTGAAGCTGCGGCAATACAAGCAGATGAT
TTTCGAACAGGCGCTTTTGGCGTACGAGGAACAAGAGCTGCCAGCCCTGA
AGGAGGCGAAGCCGGGATTGAAGCTGCGGCAATACAAGCAGATGATTTTC
GAACAG
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