mRNA_D-herbacea_F_contig101.319.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: D7FUW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW4_ECTSI) HSP 1 Score: 286 bits (732), Expect = 2.060e-91 Identity = 168/252 (66.67%), Postives = 190/252 (75.40%), Query Frame = 1
Query: 61 MKPTAVLSCGLVLATARLASAFLAPTAGAIARQQRQLQHATASSQALQAN-----RSQVPHMSARDGGAE---AGRRGGTGLFLEGVKTAVASAAIGIALAAPMLSLPSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSFFKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
MK T +L C + L A SAF+APT I +Q A+ + Q + R+ P MS GG E +G GT F GVK A+ SAAIG+ LA PMLSLP A A DKR +GEISASGLVFKDKLNVEAFSDPK+KGVTLYLSDF+RPVADKL+NGD+FSDPSSA++ CVRSGPM V DGI+TSKEGEEL KED+SFFKSIVVRRLYDKEANN+VYVSYSSKLDT SDGNKSRFKSSLCALH+E
Sbjct: 1 MKWTNILPCVVGLCPA---SAFVAPTL--IVKQGTSRVRASGACVGRQHDPSSSLRNSAPTMSMSRGGEEGEQSGAASGTTRFARGVKAALTSAAIGLTLAGPMLSLPGTASAGDKRTVGEISASGLVFKDKLNVEAFSDPKVKGVTLYLSDFARPVADKLMNGDIFSDPSSAALFCVRSGPMEVKDGISTSKEGEELFKEDRSFFKSIVVRRLYDKEANNIVYVSYSSKLDTGSDGNKSRFKSSLCALHIE 247
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A7S2RD44_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD44_9STRA) HSP 1 Score: 174 bits (442), Expect = 9.720e-49 Identity = 99/165 (60.00%), Postives = 121/165 (73.33%), Query Frame = 1
Query: 310 ASAAIGIALAAPMLSL---PSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
ASA +G ALAA L L PS A A +K IGE+ SG VFKD L+V +F+DPK+ GVT+Y+SDFS+ + D+L GD FSDPS+AS+TCVR GP+ + I+ SK GEE+ E +S FKS+ VRRLYD E NNVVYVSYS K+ N D NKSRFKSSLCALH+E
Sbjct: 26 ASAVMGTALAAQSLMLLLHPSPAFAGEK--IGEVPTSGFVFKDTLDVSSFADPKVSGVTIYVSDFSKAITDRL-QGDFFSDPSTASITCVRDGPVRLTGSIDKSKAGEEIFSEARSLLFKSVKVRRLYDAEKNNVVYVSYSQKVVNNDDSNKSRFKSSLCALHLE 187
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A6V1LIM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LIM7_HETAK) HSP 1 Score: 172 bits (437), Expect = 5.820e-48 Identity = 96/164 (58.54%), Postives = 118/164 (71.95%), Query Frame = 1
Query: 304 AVASAAIGIALAAPMLSLPSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
A A+AA+ AL ++ P A R + EI ASGLVFKD LNVEAF+DPK++GVTLYLSDF+RP+ ++L D FSDPSSAS+TC R+GPM + D I +GE++ E KS FKSI V+R+YD + N VVYVSYS KL + D NKSRFKSSLCALHVE
Sbjct: 44 ATAAAALAAALLTAGIAAPPALAA---RTVAEIPASGLVFKDTLNVEAFADPKVEGVTLYLSDFTRPITERLQK-DFFSDPSSASVTCARTGPMRLADNIERGPKGEDVFSEAKSLLFKSIKVKRVYDADTNTVVYVSYSDKLIKSDDDNKSRFKSSLCALHVE 203
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A7S3H326_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H326_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.990e-47 Identity = 78/139 (56.12%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 379 DKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
DKR++GEI ASG++FKD +NVE F DPK++GV +YLSDFSR VAD++ GD FSDP +A + CVRSGP+ V + KEGE++ E +S FK++ V+R+YD E NVVYV ++ + DTN D NKSRFKS +CA+HV+
Sbjct: 2 DKRLVGEIPASGMIFKDTINVEEFDDPKVQGVNIYLSDFSRSVADRISKGDFFSDPGAAGLACVRSGPVKVAADLQPRKEGEDVFTESRSILFKTLKVKRVYDAEGKNVVYVVFTDRFDTNDDKNKSRFKSQICAIHVD 140
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A7S2LDB5_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LDB5_9DINO) HSP 1 Score: 169 bits (428), Expect = 7.080e-47 Identity = 86/176 (48.86%), Postives = 121/176 (68.75%), Query Frame = 1
Query: 268 GGTGLFLEGVKTAVASAAIGIALAAPMLSLPSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
GG G L G A +AA +A A P A A DKR++GEI A+GL+FKD +NVE F DPK+KGV LY+SDFS+ + D+L GD FSDP S+ ++CV++GP++V + KEGE++ E +S FK++ V+R+YD EA NVVYV ++ +LD + D NK+RF+S +CALH +
Sbjct: 3 GGQGAGLGGGVRAAFAAACLLAAAVAGTVAPEAASAGDKRVVGEIPANGLIFKDTINVEEFDDPKVKGVNLYISDFSKALTDRLSKGDFFSDPGSSGLSCVKTGPILVSPDLQAKKEGEDVFTEARSIMFKTLRVKRVYDAEAQNVVYVVFTDRLDNSDDKNKTRFQSQVCALHAD 178
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A812HSU0_9DINO (CreA protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812HSU0_9DINO) HSP 1 Score: 171 bits (433), Expect = 1.180e-46 Identity = 87/195 (44.62%), Postives = 133/195 (68.21%), Query Frame = 1
Query: 223 PHMSARDGGAEAGRRGG----TGLFLEGVKTAVASAAIGIALAAPMLSLPSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
P +SA+ G G RG TG + A +++A G+AL + + A A KR++GEI ASG +FKD +NVEAF DPK+ GV+LY+SDFSR +AD++ GD FSDP +A +TC ++GP+ + + SKEGE++ E ++ FK++ V+R+YD +A N++YV+Y+ ++D N+D NKSRFKS +CA+H++
Sbjct: 62 PFLSAQCAGVARGARGSQTECTGSLEQ---LAYSASAAGLALLLGFFVMQAPARAESKRLVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCAKNGPVKISPDLKPSKEGEDVFSESRAILFKTLKVKRIYDADAKNILYVAYTERVDNNNDANKSRFKSQVCAVHID 253
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A7S4I5U4_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I5U4_9EUKA) HSP 1 Score: 167 bits (424), Expect = 3.110e-46 Identity = 92/172 (53.49%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 283 FLEGVKTAVASAAIGIALA-APMLSLPSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
F V+ +V +AA+ +LA +P+++LP A A DKR +GEIS SGL+FKD L +EAF DPK+ G+ LYLSDF RPV +KL GDVFSDPSS ++C RSG +VV + K GEE+ E +S FKS+ VRR+ DK +VVY YS +LD D N SRFKSSLCA+ V+
Sbjct: 10 FSSSVQNSVLAAALTASLATSPLVALPDAAFA-DKRTVGEISTSGLIFKDTLKIEAFDDPKVSGINLYLSDFERPVTEKLAKGDVFSDPSSGGLSCSRSGKVVVSATASFDKGGEEVFSEARSLVFKSLKVRRVIDKPGKSVVYAVYSQRLDKKEDSNNSRFKSSLCAVPVD 180
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A1Q9F2P2_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9F2P2_SYMMI) HSP 1 Score: 169 bits (427), Expect = 4.900e-46 Identity = 77/161 (47.83%), Postives = 121/161 (75.16%), Query Frame = 1
Query: 313 SAAIGIALAAPMLSLPSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
+AA G+A+ + ++ S A A KR++GEI ASG +FKD +NVEAF DPK+ GV+LY+SDFSR +AD++ GD FSDP +A +TC R+GP+++ + SKEGE++ E ++ FK++ V+R+YD +A N++YV+++ ++D N+D NKSRFKS + A+H++
Sbjct: 72 AAATGLAILLGLFAVLSPASAESKRVVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCARNGPVMISPDLKPSKEGEDVFTESRAILFKTLKVKRIYDADAKNILYVAFTERMDNNNDSNKSRFKSQVVAVHID 232
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A812IZF1_9DINO (CreA protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812IZF1_9DINO) HSP 1 Score: 167 bits (424), Expect = 9.620e-45 Identity = 76/161 (47.20%), Postives = 121/161 (75.16%), Query Frame = 1
Query: 313 SAAIGIALAAPMLSLPSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
+AA G+A+ + ++ + A A KR++GEI ASG +FKD +NVEAF DPK+ GV+LY+SDFSR +AD++ GD FSDP +A +TC R+GP+++ + SKEGE++ E ++ FK++ V+R+YD +A N++YV+++ ++D N+D NKSRFKS + A+H++
Sbjct: 143 AAATGLAILLGLFTVLAPASAESKRVVGEIPASGFIFKDTINVEAFEDPKVSGVSLYISDFSRSMADRVSKGDFFSDPGAAGLTCARNGPVMISPDLKPSKEGEDVFTESRAILFKTLKVKRIYDADAKNILYVAFTERMDNNNDSNKSRFKSQVVAVHID 303
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Match: A0A7S3PVU6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVU6_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.000e-44 Identity = 82/147 (55.78%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 355 LPSVAGAADKRMIGEISASGLVFKDKLNVEAFSDPKIKGVTLYLSDFSRPVADKLLNGDVFSDPSSASMTCVRSGPMVVGDGINTSKEGEELIKEDKSF-FKSIVVRRLYDKEANNVVYVSYSSKLDTNSDGNKSRFKSSLCALHVE 792
LP A+ R++GEI+ SG+VFKD L VE+F DPK+KGVTLY+S+F RP+ ++L D F+DPS AS+ C ++GP+VV D I K+GEE+ +E++S FK + V+R+YDKE N VVYVS++++LD NSD NKSRFKSS CAL +E
Sbjct: 58 LPGGEANAESRLVGEIAGSGIVFKDTLTVESFDDPKVKGVTLYISNFQRPLNERLKK-DFFNDPSFASVACAKTGPIVVADNIVIGKQGEEVFEENRSLLFKQLKVQRIYDKEKNTVVYVSFNTRLDKNSDDNKSRFKSSTCALGLE 203 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig101.319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig101.319.1 >prot_D-herbacea_F_contig101.319.1 ID=prot_D-herbacea_F_contig101.319.1|Name=mRNA_D-herbacea_F_contig101.319.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=245bp MKPTAVLSCGLVLATARLASAFLAPTAGAIARQQRQLQHATASSQALQANback to top mRNA from alignment at D-herbacea_F_contig101:698560..704633+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig101.319.1 ID=mRNA_D-herbacea_F_contig101.319.1|Name=mRNA_D-herbacea_F_contig101.319.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6074bp|location=Sequence derived from alignment at D-herbacea_F_contig101:698560..704633+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig101:698560..704633+ >mRNA_D-herbacea_F_contig101.319.1 ID=mRNA_D-herbacea_F_contig101.319.1|Name=mRNA_D-herbacea_F_contig101.319.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1470bp|location=Sequence derived from alignment at D-herbacea_F_contig101:698560..704633+ (Desmarestia herbacea DmunF female)back to top |