mRNA_D-herbacea_F_contig101.317.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig101.317.1
Unique NamemRNA_D-herbacea_F_contig101.317.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: D7FUW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW2_ECTSI)

HSP 1 Score: 526 bits (1355), Expect = 1.070e-185
Identity = 260/306 (84.97%), Postives = 279/306 (91.18%), Query Frame = 3 
Query:  147 MAPKDTSKKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAGSKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATPDGNKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPDSITGA 1064
            MAP++  +KNP+MHL+AGGVAGVVESSCCHPLDTVKTRMQLR+K GS +GP+ TAS I++ EGF ALYKGLSAVM GIVPKMAVRFTSFE YK WL A+P GNKGLVFLAGLGSGVTEA++VVTPAEVCKIRMQAQFHSLLDP+EMA RKYRNVLQTA VVAREEGV ALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLS Y G +ELA WQHMLLGG+SGGIGP VNNPLDVVKTRLQKQV+IPGQ PKYGGF SAI LIAKEEGV+ALWKGLTPRLMRIMPGQAITFMTYEWVSKRLP S T +
Sbjct:    1 MAPRND-RKNPLMHLVAGGVAGVVESSCCHPLDTVKTRMQLRIKGGSTKGPLRTASSIITKEGFLALYKGLSAVMMGIVPKMAVRFTSFETYKEWLGASPTGNKGLVFLAGLGSGVTEAIVVVTPAEVCKIRMQAQFHSLLDPEEMARRKYRNVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSLYTGSEELASWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASFTAS 305
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: A0A6V1U9P6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U9P6_HETAK)

HSP 1 Score: 453 bits (1165), Expect = 1.330e-156
Identity = 223/298 (74.83%), Postives = 253/298 (84.90%), Query Frame = 3 
Query:  156 KDTSKKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAGSKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATPDGN--KGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1043
            K + +K+P+MHLIAGG AG+VES+CCHPLDT+KTRMQLR  AGS  GPI TA+RIV++EGFFALYKGL+AV AGI+PKM  RFTSFE YK +LR TPD N  KG V LAGLGSGVTEA+LVVTPAEVCKIRMQ+Q+HS++DP  +A RKYRNVLQTA V+ REEG  ALYKG+ PT LRQGCNQAVNFTCYQ+FK Q     GR+ELAPWQHML+GG+SGG GPA NNPLDVVKTRLQKQ + PGQ PKY G G A+ +IAKEEGV ALWKGLTPRLMRIMPGQAITFMTYE+VSK +
Sbjct:    5 KSSERKHPLMHLIAGGSAGLVESTCCHPLDTIKTRMQLRATAGSTIGPIQTATRIVTNEGFFALYKGLTAVWAGIIPKMMTRFTSFEMYKDFLRKTPDENLSKGKVLLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSMMDPAAVATRKYRNVLQTAVVIVREEGPGALYKGVVPTTLRQGCNQAVNFTCYQIFKEQWLKRSGREELAPWQHMLIGGLSGGFGPAANNPLDVVKTRLQKQRVEPGQRPKYTGLGQAVVVIAKEEGVLALWKGLTPRLMRIMPGQAITFMTYEFVSKHV 302
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: D8LI49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI49_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 3.110e-151
Identity = 224/291 (76.98%), Postives = 247/291 (84.88%), Query Frame = 3 
Query:  183 MHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAGSKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATPDGNKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPDSI 1055
            +H   GG AGVVESSCCHPLDT+KTR QL     +   P   A R+V +EG FALY+GLSAVMAGIVPKM+VRF+SFE YKGWL A    +KGLVFLAGLGSGVTEAV+VVTPAEVCKIRMQ+Q  SL    + ++ KYR+VLQTATVV REEGVRALYKGLAPTVLRQGCNQAVNFTCYQ+FKT+LS  LG +ELAPW HMLLGG+SGGIGP VNNPLDV KTRLQ+QV+IPGQ PKYGGF SAI LIAKEEGV+ALWKGLTPRLMRIMPGQAITFMTYEWVSKRLP S+
Sbjct:    4 LHGTYGGAAGVVESSCCHPLDTIKTRTQL-----TSLSPAIVAKRLVKNEGVFALYRGLSAVMAGIVPKMSVRFSSFELYKGWLGAAEGHSKGLVFLAGLGSGVTEAVMVVTPAEVCKIRMQSQ--SLQVIADGSSGKYRDVLQTATVVVREEGVRALYKGLAPTVLRQGCNQAVNFTCYQVFKTKLSDLLGTEELAPWHHMLLGGLSGGIGPCVNNPLDVSKTRLQQQVLIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASL 287
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: A0A836CM83_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM83_9STRA)

HSP 1 Score: 426 bits (1094), Expect = 1.030e-145
Identity = 212/309 (68.61%), Postives = 250/309 (80.91%), Query Frame = 3 
Query:  168 KKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAGSKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATPDGNKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPDSITGANTSPASSPAT 1094
            KK+P++HLIAGG AG VESS   PLDT+KTRMQLR K  S  GPI TA RI+ +EGFF+LYKGL+AVMAGIVPKMAVRF+SF+ +K WL      +K  VFLAGLGSGVTEAV+VVTPAEVCKIRMQAQ+HS+LDP++MA RKYRNV+QTA ++ +EEG+ ALYKG+ PT LRQGCNQAVNF+ YQ+FKT+        EL  WQHML+GG+SGG+GP VNNPLDVVKTRLQ+QV+IPG+VPKY G G  + +IAKEEGV ALWKGLTPRL+RIMPGQAITF TYE+VSK+    I G  +  A  PAT
Sbjct:   17 KKHPLIHLIAGGAAGAVESSVLFPLDTIKTRMQLRAKGRSAYGPITTAQRIIKNEGFFSLYKGLTAVMAGIVPKMAVRFSSFDLFKTWLGCLDGKDKKRVFLAGLGSGVTEAVMVVTPAEVCKIRMQAQYHSMLDPEQMARRKYRNVIQTAGLIVKEEGIGALYKGVVPTTLRQGCNQAVNFSFYQIFKTKWEAARDGKELIAWQHMLIGGLSGGMGPVVNNPLDVVKTRLQRQVVIPGEVPKYRGLGQGMAVIAKEEGVLALWKGLTPRLLRIMPGQAITFATYEFVSKK----IHGLASFQAPEPAT 321
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: W7U0T5_9STRA (Succinate fumarate mitochondrial transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0T5_9STRA)

HSP 1 Score: 399 bits (1026), Expect = 3.500e-135
Identity = 212/303 (69.97%), Postives = 233/303 (76.90%), Query Frame = 3 
Query:  141 TSMAPKDTSKKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAGSKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATPDGNKGLV--FLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1043
            T  A     KK  V HLIAGG AG VESS CHPLDT+KTRMQLR   GS  G   TA RIV  E F ALYKGL+AV  GIVPKMAVRF+SFEAYK +L A  DG    V  FLAGLGSGVTEAVLVVTPAEVCKIR+QAQFHS+ DP ++ANRKYRNVLQTA VVAREEG+ ALYKG+ PTV+RQG NQAVNFT YQ  KT       R EL PW+ ML GG+SGG+GP VNNPLDVVKTRLQKQ I+ GQ+PKY G   AI +I  EEGV ALWKG+TPRLMRIMPGQAITFMTYE+VS+ +
Sbjct:   20 TQKAVSTPKKKTFVHHLIAGGAAGFVESSICHPLDTIKTRMQLRQAGGSTHGLFMTAFRIVQKESFPALYKGLTAVYMGIVPKMAVRFSSFEAYKSYL-AGADGKVSPVGTFLAGLGSGVTEAVLVVTPAEVCKIRLQAQFHSMADPVQLANRKYRNVLQTAVVVAREEGIGALYKGVVPTVMRQGINQAVNFTTYQAVKTAWLERQQRKELLPWESMLFGGLSGGLGPLVNNPLDVVKTRLQKQRIVEGQLPKYRGIFQAIPVIVSEEGVLALWKGITPRLMRIMPGQAITFMTYEFVSRHM 321
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: A0A6U4GJ12_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GJ12_9STRA)

HSP 1 Score: 383 bits (983), Expect = 5.780e-129
Identity = 202/317 (63.72%), Postives = 240/317 (75.71%), Query Frame = 3 
Query:  150 APKDTSKKNP--VMHLIAGGVAGVVESSCCHPLDTVKTRMQLRV-KAG-SKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATPDGN-KGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQ-EMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLST-YLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPDSITGANTSPA 1079
            A K T++K      HL+ GG AG+VES CCHPLDT+KTRMQLRV  AG +++GP+ T   IV  EGFF+LYKGL+AV+ GIVPKMAVRF+S+E Y+  L A  DG  +  VFLAGLGSGVTEA+LVVTPAEVCKIRMQ+Q+HSL DP       KYRNV QTA  + REEG+ ALYKG+ PT+ RQGCNQAVNFT YQ  K  +S  +    ELA WQH+LLGG+SGG+GP  NNPLDVVKTR+QKQVI+PG+ PKY G  S I +IA+EEGV ALW+G+TPRLMRIMPGQAITFMTYE++ K L   I+   T  A
Sbjct:    4 ADKQTTRKRKPFAQHLVCGGAAGLVESFCCHPLDTIKTRMQLRVLTAGRARKGPLLTGVGIVQREGFFSLYKGLTAVVTGIVPKMAVRFSSYEQYRIMLDAEGDGAPRARVFLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSLKDPALRFEEVKYRNVFQTAYTIVREEGLGALYKGVGPTIARQGCNQAVNFTAYQSMKDWVSANFRDGGELASWQHLLLGGLSGGMGPLANNPLDVVKTRMQKQVILPGETPKYAGMISGIGVIAREEGVGALWRGITPRLMRIMPGQAITFMTYEFMQKNLWTMISSKKTQRA 320
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: B7GCT1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCT1_PHATC)

HSP 1 Score: 380 bits (976), Expect = 8.470e-128
Identity = 197/309 (63.75%), Postives = 231/309 (74.76%), Query Frame = 3 
Query:  141 TSMAPKDTSKKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAG---SKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWL-----RATPDGNKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1043
            T  AP   +KK+P+ HLIAGG AG+VESS CHPLDT+KTRMQL   AG   +  GPI TA RIV  EG  ALYKGL+AV  GIVPKMA+RF SFE Y+ +L      A       + F AGL SG+TEAVLVVTPAEVCKIRMQ+Q+HS++DP  M +RKY NVLQTA ++ +EEG  ALYKG+ PT+LRQGCNQAVNFT Y   K Q+  + G D LA WQ +L+GG+SGG+GP VNNPLDVVKTRLQKQV+  G+  KY G   A  +IAKEEGV ALWKG+TPRLMRIMPGQAITFMTYE VS ++
Sbjct:   12 TPPAPTPPTKKHPLQHLIAGGCAGLVESSVCHPLDTIKTRMQLPA-AGVVQAPLGPIGTARRIVQREGLLALYKGLTAVYTGIVPKMAIRFVSFEQYREFLTARLGNADKSNATQITFTAGLFSGLTEAVLVVTPAEVCKIRMQSQYHSMMDPTAMQHRKYTNVLQTAMLIVKEEGAGALYKGVVPTMLRQGCNQAVNFTAYSAIKQQVMQWQGTDSLASWQSLLIGGLSGGMGPVVNNPLDVVKTRLQKQVVAAGKPAKYTGLAQACVVIAKEEGVLALWKGITPRLMRIMPGQAITFMTYEAVSAQM 319
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: A0A6V1U9R0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U9R0_HETAK)

HSP 1 Score: 373 bits (958), Expect = 2.110e-122
Identity = 189/296 (63.85%), Postives = 225/296 (76.01%), Query Frame = 3 
Query:  156 KDTSKKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAGSKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATPDGN--KGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSK 1037
            K + +K+P+MHLIAGG AG+VES+CCHPLDT+KTRMQLR  AGS  GPI TA+RIV++EGFFALYKGL+AV AGI+PKM  RFTSFE YK +LR TPD N  KG V LAGLGSGVTEA+LVVTPAEVCKIRMQ+Q+HS++DP  +A RKYRNVLQTA V+ REEG  ALYKG+ PT LRQGCNQAVNFTCYQ+FK Q     GR+ELAPWQHML+GG+SGG GPA NNPLDVVKTRLQ     PG   +Y      ++ I +EEG   L +G  P ++  +      +  YE+  +
Sbjct:    5 KSSERKHPLMHLIAGGSAGLVESTCCHPLDTIKTRMQLRATAGSTIGPIQTATRIVTNEGFFALYKGLTAVWAGIIPKMMTRFTSFEMYKDFLRKTPDENLSKGKVLLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSMMDPAAVATRKYRNVLQTAVVIVREEGPGALYKGVVPTTLRQGCNQAVNFTCYQIFKEQWLKRSGREELAPWQHMLIGGLSGGFGPAANNPLDVVKTRLQTA---PG---RYANLADGVRTIYREEGGAMLLQGAAPTMVGYLWYGLTVYPGYEFFKR 294
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: A0A1Z5JX09_FISSO (Solute carrier family 25 (Mitochondrial citrate transporter), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JX09_FISSO)

HSP 1 Score: 367 bits (943), Expect = 3.400e-122
Identity = 195/361 (54.02%), Postives = 236/361 (65.37%), Query Frame = 3 
Query:  147 MAPKDTSKKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAGSKR----------------------------------------------------------GPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATPDG---NKGLV-FLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1043
            MAP D  KK+P+ HL+AGG AG+VESS CHPLDT+KTRMQLR ++ +                                                            GPI TA RIV  EGFFALYKGL+AV  GI+PKMA+RF SFE Y+ W+         + G+V F AGL SG+TEA+LVVTPAEVCKIRMQ+QFHS++DP ++  RKY NV+QTA ++ +EEG+ ALYKG+ PT+LRQGCNQAVNFT Y   K ++    G D L  WQ +L+GG+SGG+GP VNNPLDVVKTRLQKQVI PG+ PKY G G A   I +EEGV ALWKG+TPRL+RIMPGQAITFMTYE VS ++
Sbjct:    1 MAPDDK-KKHPLQHLLAGGAAGLVESSVCHPLDTIKTRMQLRRQSATVEKVVVKMRDSMMEPALRLQHSLQDPVLRTAGGLEPGIRMSGPTKLAHVTMHPHTVQAPLGPIGTARRIVEREGFFALYKGLTAVWTGIIPKMAIRFVSFEQYREWMGPPAQQYGVSAGMVTFTAGLASGLTEAILVVTPAEVCKIRMQSQFHSMMDPSQLQKRKYTNVIQTAFLIVKEEGLGALYKGVIPTMLRQGCNQAVNFTAYNYIKREVMARQGTDSLDSWQSLLIGGLSGGMGPLVNNPLDVVKTRLQKQVITPGKTPKYTGLGQACLKIGREEGVLALWKGITPRLLRIMPGQAITFMTYEAVSAQM 360
[Close]
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Match: A0A7S3L1V8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1V8_9STRA)

HSP 1 Score: 366 bits (940), Expect = 1.600e-121
Identity = 194/376 (51.60%), Postives = 240/376 (63.83%), Query Frame = 3 
Query:  147 MAPKDTSKKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLR----------------------------------------------------------------------------VKAGSKRGPIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLR-ATPDGNKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRKYRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSTYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPKYGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1043
            M+ +++ KK+P++HL+AGG AG VESS CHPLDT+KTRMQLR                                                                            VKAG   GPI TA RI+  EGF ALYKGL+AV  GIVPKMA+RF SFE Y+ WL+ AT   + G+ F AGL SG+TEA+L+VTPAEVCKIRMQ+Q+HS++DP +M +RKY NV+QTA  + REEG+ ALYKG+ PT+LRQGCNQAVNFT Y   K ++  +   D+L  WQ +++GG+SGG+GP VNNPLDVVKTRLQKQ++  G+ PKY G   A  LIAKEEGV ALWKG+TPRL+RIMPGQAITFMTYE+ S +L
Sbjct:    1 MSKEESKKKHPMLHLVAGGCAGFVESSVCHPLDTIKTRMQLRRQEASVEQVVVRVKSSLVEPAMRLGHSLRDPAAFMPSAAVAGAGGVHEPGLHMGSTPSAARTETVVVKPVKAPKGLVKAGM--GPIGTAHRIIQREGFMALYKGLTAVYTGIVPKMAIRFVSFEQYRDWLQVATGAKSSGVTFTAGLASGLTEAILIVTPAEVCKIRMQSQYHSMIDPSQMQHRKYTNVVQTAFTIVREEGISALYKGVVPTMLRQGCNQAVNFTAYSAIKQKVMAHQKTDKLEHWQSLVIGGLSGGMGPLVNNPLDVVKTRLQKQIVHQGKAPKYTGLLQACVLIAKEEGVLALWKGITPRLLRIMPGQAITFMTYEFCSAQL 374
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig101.317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUW2_ECTSI1.070e-18584.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1U9P6_HETAK1.330e-15674.83Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
D8LI49_ECTSI3.110e-15176.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM83_9STRA1.030e-14568.61Mitochondrial carrier domain-containing protein n=... [more]
W7U0T5_9STRA3.500e-13569.97Succinate fumarate mitochondrial transporter n=2 T... [more]
A0A6U4GJ12_9STRA5.780e-12963.72Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B7GCT1_PHATC8.470e-12863.75Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6V1U9R0_HETAK2.110e-12263.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5JX09_FISSO3.400e-12254.02Solute carrier family 25 (Mitochondrial citrate tr... [more]
A0A7S3L1V8_9STRA1.600e-12151.60Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig101contigD-herbacea_F_contig101:653463..663758 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score531.9
Seed ortholog evalue2e-148
Seed eggNOG ortholog2880.D7FUW2
Preferred nameSFC1
KEGG koko:K07964,ko:K15100
KEGG TC2.A.29.7
KEGG ReactionR07811
KEGG Pathwayko00531,ko01100,ko05205,map00531,map01100,map05205
KEGG ModuleM00078
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005469,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015138,GO:0015141,GO:0015238,GO:0015291,GO:0015297,GO:0015318,GO:0015556,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071422,GO:0071702,GO:0098656,GO:1903825,GO:1905039
EggNOG free text desc.mitochondrial tricarboxylic acid transmembrane transport
EggNOG OGsKOG0756@1,KOG0756@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-26_004420.1
EC3.2.1.166
COG Functional cat.U
CAZyGH79
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko02000
Exons4
Model size1225
Cds size978
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig101.317.1prot_D-herbacea_F_contig101.317.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig101 653609..663657 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927428.261876-UTR-D-herbacea_F_contig101:653462..6536081622927428.261876-UTR-D-herbacea_F_contig101:653462..653608Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig101 653463..653608 +
1690790164.725966-UTR-D-herbacea_F_contig101:653462..6536081690790164.725966-UTR-D-herbacea_F_contig101:653462..653608Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig101 653463..653608 +
1622927428.3314-UTR-D-herbacea_F_contig101:663657..6637581622927428.3314-UTR-D-herbacea_F_contig101:663657..663758Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig101 663658..663758 +
1690790164.787326-UTR-D-herbacea_F_contig101:663657..6637581690790164.787326-UTR-D-herbacea_F_contig101:663657..663758Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig101 663658..663758 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927428.2765949-CDS-D-herbacea_F_contig101:653608..6539211622927428.2765949-CDS-D-herbacea_F_contig101:653608..653921Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig101 653609..653921 +
1690790164.7391012-CDS-D-herbacea_F_contig101:653608..6539211690790164.7391012-CDS-D-herbacea_F_contig101:653608..653921Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig101 653609..653921 +
1622927428.2906468-CDS-D-herbacea_F_contig101:660476..6607181622927428.2906468-CDS-D-herbacea_F_contig101:660476..660718Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig101 660477..660718 +
1690790164.7560053-CDS-D-herbacea_F_contig101:660476..6607181690790164.7560053-CDS-D-herbacea_F_contig101:660476..660718Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig101 660477..660718 +
1622927428.3086438-CDS-D-herbacea_F_contig101:661492..6616601622927428.3086438-CDS-D-herbacea_F_contig101:661492..661660Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig101 661493..661660 +
1690790164.766477-CDS-D-herbacea_F_contig101:661492..6616601690790164.766477-CDS-D-herbacea_F_contig101:661492..661660Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig101 661493..661660 +
1622927428.3208842-CDS-D-herbacea_F_contig101:663402..6636571622927428.3208842-CDS-D-herbacea_F_contig101:663402..663657Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig101 663403..663657 +
1690790164.7751727-CDS-D-herbacea_F_contig101:663402..6636571690790164.7751727-CDS-D-herbacea_F_contig101:663402..663657Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig101 663403..663657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig101.317.1

>prot_D-herbacea_F_contig101.317.1 ID=prot_D-herbacea_F_contig101.317.1|Name=mRNA_D-herbacea_F_contig101.317.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=326bp
MAPKDTSKKNPVMHLIAGGVAGVVESSCCHPLDTVKTRMQLRVKAGSKRG
PIATASRIVSHEGFFALYKGLSAVMAGIVPKMAVRFTSFEAYKGWLRATP
DGNKGLVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSLLDPQEMANRK
YRNVLQTATVVAREEGVRALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLS
TYLGRDELAPWQHMLLGGISGGIGPAVNNPLDVVKTRLQKQVIIPGQVPK
YGGFGSAIKLIAKEEGVRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLP
DSITGANTSPASSPATVSAAVKTRG*
back to top

mRNA from alignment at D-herbacea_F_contig101:653463..663758+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig101.317.1 ID=mRNA_D-herbacea_F_contig101.317.1|Name=mRNA_D-herbacea_F_contig101.317.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=10296bp|location=Sequence derived from alignment at D-herbacea_F_contig101:653463..663758+ (Desmarestia herbacea DmunF female)
TGTATACTAATTTAGCGACAATTCTTCTGAATATCTGGCGAGACAAGGAG
AGGTGCAATTTTTCCACATCGACAAAAAAACAAGAACGAAAAGCGGTGTA
CAGCAGCAGCACCGAAGACAACCACATAGAGAAGCATCAAACAAGCATGG
CACCCAAAGACACTTCAAAGAAGAATCCCGTCATGCATCTAATTGCTGGC
GGCGTTGCGGGCGTGGTGGAATCCTCTTGCTGCCATCCGCTCGACACCGT
AAAAACGAGGATGCAGCTGAGAGTCAAAGCGGGAAGTAAACGAGGGCCAA
TCGCGACGGCGTCGCGGATCGTGTCCCACGAGGGCTTCTTCGCCCTGTAC
AAGGGCTTGAGCGCCGTGATGGCGGGTATCGTGCCCAAGATGGCCGTACG
ATTTACGTCGTTCGAGGCGTACAAAGGGTGGCTCAGGGCAACACCGGACG
GGAACAAAGGTGGGCGCGTGGATTCTGTGGGGTGGGTCTCAATTTTCCGA
TCTGTTACTATTTTTATTGGTGGTACAGTACAGTTATCGTAATCGTACAC
AGCAATATTCAAACACATACCATCAGCCTTCGGTCTACGAAACACCGCAC
CTCTTGCGAAACCGGTCTCCCGTCGCTGGCACGTCGTCTACAGCCACGTT
CGTGTCTTTTCAACCGTTTTCAGTTATTGCGTGGTGGGACGTGGACACCA
GAGATGTCTCGGGTATTGGAGACTGGAAAAAAAAATGCCGGCTCACTTGC
CTTCTTACTATCCTTCCAAGAAAAAGCAAGTTGAACTTTGACTTTTGTAG
TCACAATCAACAACGTCAAGGTTCGCTCCAGAGATCACCGACCCCGATGG
TAGTACGAGTAGTGGCCCCGTTTCAACAAGCAGGATACGTAAGGCATCGC
CATGTATCCTCAGGACTTCTCTCTCGATGGCTCTAATCGCCGTGGATGCC
CCGCGTTGCTTCGTTTTCGTTTGTCCGAATGTGGAATAAAGCCGATGTTG
GCACCACACATCCATCCGCTGTATATATACCTGGTATGATATACTGTACA
TATCATAGGGAACAGTGCTCCTACTAAATTACTACTCGTACTACTACTGT
TACTGTTCTGTAGTAGCGTAGTCAGTACTCAGTATAGTGAGTATATCCGT
ACAAGTACTACTATTATACGAAGTACTATTTTACTACTACTGTCCTGTGT
CGTCATATTATACAAGGGAAGCGTTTCTTGTATGATAGCATCAGGCCTGT
ACTCGACACGGTAGCGGTACTACTGTCTGTGTGCACGAGTGTCAAACTAT
ATGCCATATATGTGCTTACTTATCTCTCTCGATGCCATGGAGATGTTCGT
CTGTGTACGCACGCACTGAACATCTACATCCTGGAAAAAGTGTCGTGATT
TCTGTCAGGTCTTGTATTTGCTCGGGTCCACTGTAGTTTCCATCTTTCCA
TCGCACAGTATACGATGCTACGTCTGTGCGGAAACGTGATACGAAGAAAG
GGGCACCACCACTACCACTGTTGTTGTTTGTATCAAGTATGTGTGACAGC
CTCGCTTGTGGGCAAGGAAGTATAAACTTCTATATACTGTACTGTACTGT
ACTGTACAAACGGCCGAGAAAGAGGGGAGTCGGGAAGAAAACCGCCACGC
CGGCACGATTTTTCAGGGAAAATACCTACTTCGAAGTATACGAGTAACCT
GAAAATAAAATAACGGTTGCTGTACTGTACTGTTGTATCATACTGATTGG
TAAAGGAGGTGTATGATAAGCTGTGTTAAATGATCCCTTATCTGAGAGCC
GGTAGACTCCGCGCGACCGATGTGTCACACAGTGAGGTTGACGATGATAT
CCCCTGGCATATGATGTGATAGCAAGATATTAAGTGTACCACATCATATC
ATATCTTTATCATACAGCCCTTTATTTACCAGTCAGAATGCGCTTGTTAT
GCGATGCAAACTACTCATACTACTATTATTGCGTACAAGCAGCGTGTGCG
TCGACGGCGGCCTTGGGAAGGCCGCCTGGCCTACCGACGATCTCAGAGTA
TCCTTGCCCCAGTAGCGTTCATATCCATTGTAGGTCTTTCGATAGCGGTG
CTGCTTATCCACGCCGTGCAGTAGATACGGGACCAGTTAAGGGATCAAAA
CCCATACTTTATGTTCAGAATATCAGTTGCAGTATAATACTCAACATTTC
ACTTATGCTATCGTTTAACCGTTTCATTGCTACATATGGGCTTAGTGCCA
TATTTCCAACACTTTACTCAAGTAGTTAGCCCACTGGAATTTTTTCCCTC
TACCTCAGTAGATCTTGGTTCGAGCGCTTTCATTTTTCGCCAGTTTTTTT
TATTTTCCCCGTCATGGAAGGCGTTTTTGACCCGGGGATGTTATTATTTC
GTCCCCGGATTTTGGCGGAGTTCCCGAGTTGTGCCAGGTGTTCCGACCCA
GGGGATGACCGTGTTTCTTCCCTGAGTTTGGCGTTTTTTGTTTTTTGCGA
TCTTTCCCCACCATGTAAGGCGTTTTTGACCTGGGGATATATGCTATTTC
CGTCCCCGGGTTTGACGGAGTTCCCCAGTCGTGGAAGGCCGGGGATGGTA
TTGTTTCGTCTCCGGGTTTGACGGGGTCCCCGGGTCGTGGAGGGAGTTTT
CGACCCATACTTTTCGAGTAGTTTTCTGAGTCCGGGGACCCCGGGGACGG
TTAAGTGACGAAAACCCATACTGTATCCAAGTAGCTAGTGCAACACCAGA
CGGCTAGACATCAAAGTGTATTGCACACGTACAGATGCGTACTGCTGTAC
ATGGCAATAAGCGCATGTATAATGTGAAATCTCACACATTGTTTCCGTTT
TTTGCCCCCCTCAGAAAGGCTATACGATCATCGTAGTCTACAGGTAGTGC
AAATTTTGTTTTGACCTTCTCGTTCTTTGTGAACGCAACGTCTCCCACAT
GTAGAGAATAGCACGACGACCCGTTTTTTTTTTCGGTTTTTGCGAGAATC
CCGCTAAGTTCCGCGACCAAAATAAGATATCGCATGATACTGGTAAGTAA
GTAAGTAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGAA
TCACACGCACAAAACGAAAACAACTGCTCCATTTATTTATTTATTCAAGA
TTTATTTTTTGTTCCTCTTCCTTTTGGCGTTTTTTTTTCGGTTTTTGCGA
GAATCCCGCTAAGTTCCGCGACCAAAATAAGATATTGCATGATACTGGTA
GGTAAGTAAGTAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGAGC
CAGAATCACACGCACAAAACGAAAACAACTGCTCCATTTATTTATTTATT
TAAGATTTATTTTTTGTTCCTCTTCCTTTTGGCGTTTTTTTTTCGGTTTT
TGCGAGAATCCCGCTAAGTTCCGCGACCAAAATAAGATATCGCATGATAC
TGGTAAGTAAGTAAGTAAGTAAGTACCAGCAATGGAGGAGCGTCTCGTCT
CGAAAGAGCCAGAATCACACGCACAAAACGAAAACAACTGCTCCATTTAT
TTATTTATTTAAGATTTATTTTTTGTTCCTCTTCCTTTTGGCGTTTTTTT
TTTTTTCGGTTTTTGCGAGAATCCCGCTAAGTTCCGCGACCAAAATAAGA
TATTGCATGATACTGGTAGGTAAGTAAGTAAGTACCAGCAATGGAGGAGC
GTCTCGTCTCGAAAGAGCCAGAATCACACGCACAAAACGAAAACAACTGC
TCCATTTATTTATTTATTCAAGATTTATTTTTTGTTCCTCTTCCTTTTGG
CGTTTTTTTTTTTTCGGTTTTTGCGAGAATCCCGCTAAGTTCCGCGACCA
AAATAAGATATTGCATGATACTGGTAAGTAAGTAAGTAAGTAAGTACCAG
CAATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGAATCACACGCACAAAAC
GAAAACAACTGCTCCATTTATTTATTTATTTAAGATTTATTTTTTGTTCC
TCTTCCTTTTGGCGTTTTTTTTTTCGGTTTTTGCGAGAATCCCGCTAAGT
TCCGCAACCAAAATAAGATATTGCATGATACTGGTAGGTAAGTAAGTAAC
TAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGAATCACA
CGCACAAAACGAAAACAACTGCTCCATTTATTTATTTATTTAAGATTTAT
TTTTTGTTCCTCTTCCTTTTGGCGTTTTTTTTTTCGGTTTTTGCGAGAAT
CCCGCTAAGTTCCGCGACCAAAATAAGATATTGCATGATACTGGTAGGTA
AGTAAGTAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGA
ATCACACGCACAAAACGAAAACAACTGCTCCATTTATTTATTTATTCAAG
ATTTATTTTTTGTTCCTCTTCCTTTTGGCGTTTTTTTTTTCGGTTTTTGC
GAGAATCCCGCTAAGTTCCGCGACCAAAATAAGATATTGCATGATACTGG
TAAGTAAGTAAGTAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGA
GCCAGAATCACACGCACAAAACGAAAACAACTGCTCCATTTATTTATTTA
TTTAAGATTTATTTTTTGTTCCTCTTCCTTTTGGCGTTTTTTTTTTCGGT
TTTTGCGAGAATCCCGCTAAGTTCCGCAACCAAAATAAGATATTGCATGA
TACTGGTAGGTAAGTAAGTAACTAAGTACCAGCAATGGAGGAGCGTCTCG
TCTCGAAAGAGCCAGAATCACACGCACAAAACGAAAACAACTGCTCCATT
TATTTATTTATTTAAGATTTATTTTTTGTTCCTCTTCCTTTTGGCGTTTT
TTTTTTCGGTTTTTGCGAGAATCCCGCTAAGTTCCGCGACCAAAATAAGA
TATTGCATGATACTGGTAGGTAAGTAACGAAGTACCAGCAATGGAGGAGC
GTCTCGTCTCGAAAGAGCCAGAATCACACGCACAAAACGAAAACAACTGC
TCCATTTATTTATTTATTCAAGATTTATTTTTTGTTCCTCTTCCTTTTGG
CGTTTTTTTTTTCGGTTTTTGCGAGAATCCCGCTAAGTTCCGCGACCAAA
ATAAGATATTGCATGATACTGGTAAGTAAGTAAGTAAGTAAGTACCAGCA
ATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGAATCACACGCACAAAACGA
AAACAACTGCTCCATTTATTTATTTATTCAAGATTTATTTTTTGTTCCTC
TTCCTTTTGGCGTTTTTTTTTCGGTTTTTGCGAGAATCCCGCTAAGTTCC
GCAACCAAAATAAGATATTGCATGATACTGGTAGGTAAGTAAGTAACTAA
GTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGAATCACACGC
ACAAAACGAAAACAACTGCTCCATTTATTTATTTATTTAAGATTTATTTT
TTGTTCCTCTTCCTTTTGGCGTTTTTTTTTTCGGTTTTTGCGAGAATCCC
GCTAAGTTCCGCGACCAAAATAAGATATTGCATGATACTGGTAGGTAAGT
AAGTAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGAATC
ACACGCACAAAACGAAAACAACTGCTCCATTTATTTATTTATTTAAGATT
TATTTTTTGTTCCTCTTCCTTTTGGCGTTTTTTTTTTCGGTTTTTGCGAG
AATCCCGCTAAGTTCCGCGACCAAAATAAGATATTGCATGATACTGGTAA
GTAAGTAAGTAAGTAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAG
AGCCAGAATCACACGCACAAAACGAAAACAACTGCTCCATTTATTTATTT
ATTTATTTATTCAAGATTTATTTTTTGTTCCTCTTCCTTTTGGCGTTTTT
TTTTTCGGTTTTTGCGAGAATCCCGCTAAGTTCCGCAACCAAAATAAGAT
ATTGCATGATACTGGTAGGTAAGTAAGTAACTAAGTACCAGCAATGGAGG
AGCGTCTCGTCTCGAAAGAGCCAGAATCACACGCACAAAACGAAAACAAC
TGCTCCATTTATTTATTTATTTAAGATTTATTTTTTGTTCCTCTTCCTTT
TGGCGTTTTTTTTTTCGGTTTTTGCGAGAATCCCGCTAAGTTCCGCGACC
AAAATAAGATATTGCATGATACTGGTAAGTAAGTAAGTAAGTAAGTACCA
GCAATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGAATCACACGCACAAAA
CGAAAACAACTGCTCCATTTATTTATTTATTTAAGATTTATTTTTTGTTC
CTCTTCCTTTTGGCGTTTTTTTTTTCGGTTTTTGCGAGAATCCCGCTAAG
TTCCGCGACCAAAATAAGATATTGCATGATACTGGTAAGTAAGTAAGTAA
GTAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGAGCCAGAATCAC
ACGCACAAAACGAAAACAACTGCTCCATTTATTTATTTATTCAAGATTTA
TTTTTTGTTCCTCTTCCTTTTGGCGTTTTTTTTTTCGGTTTTTGCGAGAA
TCCCGCTAAGTTCCGCAACCAAAATAAGATATTGCATGATACTGGTAGGT
AAGTAAGTAACTAAGTACCAGCAATGGAGGAGCGTCTCGTCTCGAAAGAG
CCAGAATCACACGCACAAAACGAAAACAACTGCTCCATTTATTTATTTAT
TCAAGATTTATTTTTTGTTCCTCTTCCTTTTGGCGTTTTTTTTTTCGGTT
TTTGCGAGAATCCCGCTAAGTTCCGCGACCAAAATAAGATATCGCATGAT
ACTGGTAAGTAAGTAAGTAAGTAAGTACCAGCAATGGAGGAGCGTCTCGT
CTCGAAAGAGCCAGAATCACACGCACAAAACGAAAACAACTGCTCCATTT
ATTTATTTATTTATTTATTCAAGATTTATTTTTTGTTCCTCTTCCTTTTT
TTGGCGTCCATCGTCGTCCATGGTATCTATCATATGTTACGATTTCTTCT
CTTCCTACGTACAGGATTGGTGTTTCTGGCCGGTCTGGGTTCGGGCGTTA
CCGAGGCGGTGTTGGTCGTAACGCCCGCCGAGGTTTGCAAGATCCGCATG
CAGGCGCAGTTCCACTCTTTGTTGGACCCTCAGGAGATGGCCAATCGGAA
GTACAGAAACGTTCTCCAGACGGCTACGGTAGTGGCTAGGGAGGAGGGTG
TCAGGGCGCTGTACAAGGGGCTAGCCCCTACAGTGCTTAGGCAAGGCTGC
AACCAGGTAAATTGTGAAATATAGTTTTTTCTTTTTTTTTTTTTATGTAT
AGCTCTCATCAATCATTCGAACTTGCATACCACCACTACTATTATTACTG
TACTGTACAATATGTTGTATACGAAACATAACCGCTTGTATGCGGTTGGT
TGGGGGGGGGGGTCCTTGGAAGCGCAATTGATAAGAACTGGCGCGTACGG
TCTGGGTGGAAGGCGACATTGCGTTGCCGTTTACGAGGCAGCGAATTTTG
TTGGTCGCTCGCAGTGGCACCAGTAACGCATACCACCAGATACTTCCGGT
GGGGGGAAAGGGTACCTGGGAAACTCACGCGATAAAGACGTAGTTTGTAT
ACTTCGGTATATATATATACATTCCCGTCGCTCTAGTATCTCTCCAGCAG
CTCCGCTCGTAAGAGGTCGTCGCCCAGCGGCCTTCTGAGCAAATCCGTGG
CCACAGCAGTGGTTTCCCCCCCCGTAAATGTTTTGTTTATTGTTATTTAC
CACGCAAGCACGGCTAAAAGTATTCACTCACACATCTCGTCCACGTTTTC
GTCGAGTTTGCGAAGTACACAGAATACTCAAGTATCCTGTTGATTTTTTT
ATTTATCGCTTTGTAATGTTTTTTGGCAGAATTTGCTGCGTGGGGAGGGG
GGGGGTCCATGTGCAACTCTCCACGTGGCGTGTGACGCTACACATCTTAA
CCTGGCCCCTTCTGTGCGTGTTTTTATGTGCTTCGTTTTTGTCGGTCCCT
TCGAATTCGCATCTCGATTTTTCTTCCCAGGCCGTGAACTTCACTTGCTA
CCAAATGTTCAAGACTCAGCTGTCCACTTACCTGGGGAGGGACGAGCTGG
CGCCGTGGCAGCATATGCTTCTCGGGGGGATCAGCGGCGGCATCGGCCCC
GCGGTCAACAACCCGCTCGACGTCGTCAAGACTCGCCTGCAGAAACAGGT
GATGAAAGACGCTGATACATGTGGAGGGCAACCAATCGCCCTCTGTTACC
CGCAGATCCACCTCAGGTCCACCGCAGGTTCATCGCAGGTCCACCGCACA
ACGACGAGATGGACAAACTGTACGATGGTTTTACTCCGTGCTTGTGCCAT
TGTATTCTGTGGCGGGACACATCTATATATTCTAGAGCCCTATTATTAGT
GCGATTTTGACGTGGCATCTTATTGAGAGGTGCAGAACAGGCGATGAGGA
AGTGCGCAGAAAATAATTTGTATAATATTTTGAAGTATCACGGTGACCCC
TAATAAATAGCCCACAATAAGCCGCAACACCCACGTTGGCGCCTGCATGT
TAAGAATTGCCACCGCGTTAATCCCGGATCCGATTCGTTTAAACGACGCG
GTTGATCACAGGCTTTCCATCGATGCTATCCTTGTAGCATTCAGATAACG
ATTGGGGGAAGGGTAAGGGCACCTATTTATTAGGGGCCACCGTGATATAT
GTATGAGGATATTTACCCAACAGGCAGATTTGAGCGTGTGCGCGTTGGTG
TGTTTGTTGAGAGTGTGCGCGTGCAACTGACTCAGAGAGTAATGCCAGGG
TGGGAGAAACATGCTGTCTCAGTATTTCGTGGGCCATTGTGACATACAAC
CTGAAGATGTGGCGTACATCGCAGGCGTTTCGGGCAGCGGAGGATGGGGG
GGGGGAGTTGCTATATTTTGGTACCTTACTTGCGAGTCATAACTTTTGAG
CTCGTCAAACCTTGGATATGTTATTACTTTACTCCAGCCGCGAATCTAAA
ATCAAGTGGCGAGACTTGATAAGAAGCCCTACCTACCTACAGTATAATGC
AGCCAGCTCCGGGGAACTCCACGCTCAAACAATAGAAAAAACGAAAAAGG
GCTGGATGCCCAAACCCTATCCCCAACCAACAGGCAGGCGACGCCCCCCG
TAGTTTGTCTATCTCGATGGCCTAACTATCTACCAAGCCGCGGGGAAAAT
GGTACCAACAGTACATTAGTCTTACATGCCCCTGTCATCTGCCGGCCCTT
CAGTGACCTCCGTGATGATGCCTTTTTGCTTTCGTCAAGGATGCCACTCG
ATCTTGAACGCACTGCGAGAGGAAATTTTTCCACATCACAAAGCTTACAA
GGCGTACTACGACGGTAACTAAATATAACATACATCTTTAGATTTTCTAC
GAACATTTCAACCCCCCATGCGTGGTCAATGAGGGCTCTTTGCGAAGTTG
GCACCCCCAACATACCAGATTAAGACTGGAATATATTAGGATTTTGTATG
GTGTTTTATGCTATTGGGTGCCTTTTTCTTATGAAAATTTGCGTTGAGCG
TCGACCCAACCCAACCCAACCCAACCCAACCCGAACCCCAACCCTAACCC
CAACCCCAAGCCACAGTAAGGATAAGGATCGAACCCAGCGCGGCTTCGCC
GCGTGTTTGGATGACGTGAACAACACAAAAAAAAAGTTCAAGAAAAAATA
CAAAAAACACACCATACAAAACCCTAAATATATTCCAGTCTTAATCTGGT
ATGTTAGGGGTGTCAATGGTCAAATGACTAAGGCCAGGAACAAATGAGTA
CGCCCCCGCTACCCATCCCCAAAAAGGGATGCGTGGTCAAAAGATGAAAT
GACTTAAGGCAAGCGACAAATAAATACCCCCCCCCACTCCCCCTAACCCC
CCCCCCTTATTTAAACGCCTGCGCTGTACCATACGCCCAGGTGATAATCC
CTGGACAGGTGCCCAAGTACGGCGGATTCGGGTCGGCCATCAAGCTCATC
GCAAAGGAGGAAGGGGTGAGGGCCCTGTGGAAGGGTCTCACACCCCGACT
GATGCGGATCATGCCGGGACAGGCGATCACCTTCATGACCTACGAGTGGG
TTTCCAAGCGCCTCCCGGACTCCATCACAGGAGCAAACACTTCTCCTGCG
TCGTCCCCCGCAACGGTCTCTGCCGCCGTTAAGACGCGTGGTTAGGGTTG
GGGGAAGCGGGGGGTGGACAATTTTGTTTCCATTTCTTTTTTGGGGCTTG
ATTTGTGTTGTCTCTTAAGTATGTGTAGGGGGAGAACTGAGGGAGG
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig101:653463..663758+

>mRNA_D-herbacea_F_contig101.317.1 ID=mRNA_D-herbacea_F_contig101.317.1|Name=mRNA_D-herbacea_F_contig101.317.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1956bp|location=Sequence derived from alignment at D-herbacea_F_contig101:653463..663758+ (Desmarestia herbacea DmunF female)
ATGGCACCCAAAGACACTTCAAAGAAGAATCCCGTCATGCATCTAATTGC
TGGCGGCGTTGCGGGCGTGGTGGAATCCTCTTGCTGCCATCCGCTCGACA
CCGTAAAAACGAGGATGCAGCTGAGAGTCAAAGCGGGAAGTAAACGAGGG
CCAATCGCGACGGCGTCGCGGATCGTGTCCCACGAGGGCTTCTTCGCCCT
GTACAAGGGCTTGAGCGCCGTGATGGCGGGTATCGTGCCCAAGATGGCCG
TACGATTTACGTCGTTCGAGGCGTACAAAGGGTGGCTCAGGGCAACACCG
GACGGGAACAAAGATGGCACCCAAAGACACTTCAAAGAAGAATCCCGTCA
TGCATCTAATTGCTGGCGGCGTTGCGGGCGTGGTGGAATCCTCTTGCTGC
CATCCGCTCGACACCGTAAAAACGAGGATGCAGCTGAGAGTCAAAGCGGG
AAGTAAACGAGGGCCAATCGCGACGGCGTCGCGGATCGTGTCCCACGAGG
GCTTCTTCGCCCTGTACAAGGGCTTGAGCGCCGTGATGGCGGGTATCGTG
CCCAAGATGGCCGTACGATTTACGTCGTTCGAGGCGTACAAAGGGTGGCT
CAGGGCAACACCGGACGGGAACAAAGGATTGGTGTTTCTGGCCGGTCTGG
GTTCGGGCGTTACCGAGGCGGTGTTGGTCGTAACGCCCGCCGAGGTTTGC
AAGATCCGCATGCAGGCGCAGTTCCACTCTTTGTTGGACCCTCAGGAGAT
GGCCAATCGGAAGTACAGAAACGTTCTCCAGACGGCTACGGTAGTGGCTA
GGGAGGAGGGTGTCAGGGCGCTGTACAAGGGGCTAGCCCCTACAGTGCTT
AGGCAAGGCTGCAACCAGGATTGGTGTTTCTGGCCGGTCTGGGTTCGGGC
GTTACCGAGGCGGTGTTGGTCGTAACGCCCGCCGAGGTTTGCAAGATCCG
CATGCAGGCGCAGTTCCACTCTTTGTTGGACCCTCAGGAGATGGCCAATC
GGAAGTACAGAAACGTTCTCCAGACGGCTACGGTAGTGGCTAGGGAGGAG
GGTGTCAGGGCGCTGTACAAGGGGCTAGCCCCTACAGTGCTTAGGCAAGG
CTGCAACCAGGCCGTGAACTTCACTTGCTACCAAATGTTCAAGACTCAGC
TGTCCACTTACCTGGGGAGGGACGAGCTGGCGCCGTGGCAGCATATGCTT
CTCGGGGGGATCAGCGGCGGCATCGGCCCCGCGGTCAACAACCCGCTCGA
CGTCGTCAAGACTCGCCTGCAGAAACAGGCCGTGAACTTCACTTGCTACC
AAATGTTCAAGACTCAGCTGTCCACTTACCTGGGGAGGGACGAGCTGGCG
CCGTGGCAGCATATGCTTCTCGGGGGGATCAGCGGCGGCATCGGCCCCGC
GGTCAACAACCCGCTCGACGTCGTCAAGACTCGCCTGCAGAAACAGGTGA
TAATCCCTGGACAGGTGCCCAAGTACGGCGGATTCGGGTCGGCCATCAAG
CTCATCGCAAAGGAGGAAGGGGTGAGGGCCCTGTGGAAGGGTCTCACACC
CCGACTGATGCGGATCATGCCGGGACAGGCGATCACCTTCATGACCTACG
AGTGGGTTTCCAAGCGCCTCCCGGACTCCATCACAGGAGCAAACACTTCT
CCTGCGTCGTCCCCCGCAACGGTCTCTGCCGCCGTTAAGACGCGTGGTTA
GGTGATAATCCCTGGACAGGTGCCCAAGTACGGCGGATTCGGGTCGGCCA
TCAAGCTCATCGCAAAGGAGGAAGGGGTGAGGGCCCTGTGGAAGGGTCTC
ACACCCCGACTGATGCGGATCATGCCGGGACAGGCGATCACCTTCATGAC
CTACGAGTGGGTTTCCAAGCGCCTCCCGGACTCCATCACAGGAGCAAACA
CTTCTCCTGCGTCGTCCCCCGCAACGGTCTCTGCCGCCGTTAAGACGCGT
GGTTAG
back to top