mRNA_D-herbacea_F_contig100.264.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig100.264.1
Unique NamemRNA_D-herbacea_F_contig100.264.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: A0A6H5JJZ9_9PHAE (AAA domain-containing protein n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A6H5JJZ9_9PHAE)

HSP 1 Score: 839 bits (2168), Expect = 6.320e-305
Identity = 426/436 (97.71%), Postives = 434/436 (99.54%), Query Frame = 2 
Query:  317 MGDSGACQTSNKKDYDDEEDDAPPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            MGD+GACQTSNKKDYD E+DDAPPAALDEGDIALLKTYGLGPYTTSIK+IEKEI+EAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKII+AGQ+DAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSV+IPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIL IHSKSMNVDRDIRYEL+ARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN
Sbjct:    1 MGDAGACQTSNKKDYDGEDDDAPPAALDEGDIALLKTYGLGPYTTSIKDIEKEINEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIINAGQEDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVQIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILGIHSKSMNVDRDIRYELVARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 436
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: A0A6V1T8U9_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1T8U9_HETAK)

HSP 1 Score: 775 bits (2001), Expect = 1.690e-279
Identity = 386/436 (88.53%), Postives = 416/436 (95.41%), Query Frame = 2 
Query:  317 MGDSGACQTSNKKDYDDEEDDAPPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            MGDSGACQT N  DYD+E+D+ P  ALDEGDIALLKTYGLGPYT +IK IE EI+++K++VKELIGIKESDTGLS PSQWDLVSDKQMMQEEQPLQVARCTKII+AGQ+DAKYVINVRQIAKFVV LGEKV+PTDVEEGMRVGVDR KYS++IPLPPKIDPTVSLMTVEDKPDVTY+DVGGAK+ LE+LREVVELPLLHPERFVTLGIDPPKGV+L+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACI+FFDEIDAIGGSRTG D++  DNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPAL RPGR+DRKVEFGLPDLEGR HIL IH+++M+VDRDIRYEL+ARLCPNTTGAELRSVCTEAGMFAIRAR+KSI+EKDFLDAV KVIKGYQKFSSTPKYMVYN
Sbjct:    1 MGDSGACQTKNVNDYDEEQDEKPTKALDEGDIALLKTYGLGPYTNAIKKIEDEINKSKDKVKELIGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGQEDAKYVINVRQIAKFVVALGEKVAPTDVEEGMRVGVDRAKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKEPLEQLREVVELPLLHPERFVTLGIDPPKGVMLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIIFFDEIDAIGGSRTGSDEANSDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALCRPGRIDRKVEFGLPDLEGRTHILKIHTRAMSVDRDIRYELLARLCPNTTGAELRSVCTEAGMFAIRARRKSITEKDFLDAVQKVIKGYQKFSSTPKYMVYN 436
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: A0A836CGS4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS4_9STRA)

HSP 1 Score: 775 bits (2001), Expect = 1.690e-279
Identity = 394/433 (90.99%), Postives = 409/433 (94.46%), Query Frame = 2 
Query:  329 GACQTSNKKDYDDEEDDAPPA-ALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            G CQTSNK DYDDE        ALDE DIALLK+YG GPYT  IKN+EKEI  +K++VKE IGIKESDTGLS PSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTD+EEGMRVGVDRTKYS++IPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLL+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRE+FTMARSKKACI+FFDE+DAIGGSR GG+D G DNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIL IHSKSMNVDR IRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISE+DFL+AVNKVIKGY KFSSTPKYMVYN
Sbjct:    4 GECQTSNKNDYDDEXXXXXXXXALDEADIALLKSYGQGPYTVRIKNLEKEIEVSKDRVKEFIGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVREIFTMARSKKACIIFFDEVDAIGGSRGGGEDGGSDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILTIHSKSMNVDRGIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEQDFLEAVNKVIKGYSKFSSTPKYMVYN 436
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: A0A7S2CGH0_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2CGH0_9STRA)

HSP 1 Score: 756 bits (1952), Expect = 4.830e-272
Identity = 379/433 (87.53%), Postives = 408/433 (94.23%), Query Frame = 2 
Query:  329 GACQTSNKKDYDDEEDDAPPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRT-GGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            G CQT N KDYD+EED+AP   LDEGDIALLKTYG+GPYT  IK+ EKEI E +E++K+LIGIKESDTGLSQPSQWDL SDKQMMQEEQPLQVARCTKIIDA  ++AKYVINV+QIAKFVVGLGEKV+PTDVEEGMRVGVDRTKYS++IPLPPKIDP+VSLMTVEDKPDVTY++VGGAKD+LEKLREVVELPLLHPERF TLGIDPPKGVLL+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACI+FFDE+DAIGGSRT GGDD G DNEVQRTMLQIVTELDGFD RGNIKVLMATNRPDTLDPALLRPGRLDRKVEF  PDL+GRAHIL IHSK+M VDRDIRYEL+ARLCPNTTGAELRSVCTEAGMFAIR R+K+I+EKDFLD++ KVIKGYQKFSSTPKYMVYN
Sbjct:    4 GECQTKNTKDYDEEEDEAPVPVLDEGDIALLKTYGVGPYTNKIKSTEKEIKEHQEKLKDLIGIKESDTGLSQPSQWDLNSDKQMMQEEQPLQVARCTKIIDAQSEEAKYVINVKQIAKFVVGLGEKVAPTDVEEGMRVGVDRTKYSIQIPLPPKIDPSVSLMTVEDKPDVTYDEVGGAKDSLEKLREVVELPLLHPERFYTLGIDPPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIIFFDEVDAIGGSRTSGGDDGGSDNEVQRTMLQIVTELDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFAPPDLDGRAHILKIHSKTMAVDRDIRYELLARLCPNTTGAELRSVCTEAGMFAIRGRRKAITEKDFLDSIEKVIKGYQKFSSTPKYMVYN 436
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: A0A7S3JSE5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSE5_9STRA)

HSP 1 Score: 739 bits (1909), Expect = 1.750e-265
Identity = 368/437 (84.21%), Postives = 405/437 (92.68%), Query Frame = 2 
Query:  317 MGD-SGACQTSNKKDYDDEEDDAPPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            MGD +G CQT+NKKDYD+         LD GDI LLKTYG GPYT ++K +E++I   + +VKELIGIK+SDTGL  PSQWDLVSDKQMMQEEQPLQVARCTK+ID G ++AKYVINV+QIAKFVVGLGEKV+PTDVEEGMRVGVDRTKY+++IPLPPKIDPTVSLMTVEDKPDVTY+DVGGAK+ALEKLREVVELPLLHPERF+TLGIDPPKGVLL+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDE+DAIGGSRTGGDD   D+EVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL+GR H+L IH+K+M VDRDIRY+L+ARLCPNTTGA+LRSVCTEAGMFAIRAR+KS++EKD +DAVNKVIKGYQKFS+T KYMVYN
Sbjct:    1 MGDKAGECQTTNKKDYDEXXXXXXXPELDAGDIELLKTYGNGPYTVALKKVEEDIKAHENKVKELIGIKDSDTGLCIPSQWDLVSDKQMMQEEQPLQVARCTKVIDEGSEEAKYVINVKQIAKFVVGLGEKVAPTDVEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKEALEKLREVVELPLLHPERFLTLGIDPPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEVDAIGGSRTGGDDGNADHEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLQGRTHVLKIHAKTMAVDRDIRYDLLARLCPNTTGADLRSVCTEAGMFAIRARRKSVTEKDLIDAVNKVIKGYQKFSATAKYMVYN 437
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: F0YJ93_AURAN (26S proteasome ATPase subunit n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YJ93_AURAN)

HSP 1 Score: 737 bits (1902), Expect = 1.960e-264
Identity = 369/433 (85.22%), Postives = 400/433 (92.38%), Query Frame = 2 
Query:  329 GACQTSNKKDYDDEEDDAPPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGD-DSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            G CQTSNK +YD  E +  P  LDEGDI LLKTYG GPYT ++K  E +I + +++VK+LIGIK+SDTGL  PSQWDLVSDKQ MQEEQPLQVARCTKIID G +D KYVINV+QIAKFVVGLGEKV+PTDVEEGMRVGVDRTKY+++IPLPPKIDPTVSLMTVEDKPDVTY++VGGAK++LEKLREVVELPLLHPERF+TLGIDPPKGVLL+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACI+FFDE+DAIGGSRT GD D G DNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGR HIL IH+K+M VD DIRYEL+ARLCPNTTGAELRSVCTEAGMFAIR R+KSI+EKD +DAVNKVIKGYQKFSSTPKYMVYN
Sbjct:    4 GECQTSNKLEYDPNEKEEAPPELDEGDIELLKTYGNGPYTLALKKCEDDIKKHEKKVKDLIGIKDSDTGLCIPSQWDLVSDKQTMQEEQPLQVARCTKIIDEGNEDCKYVINVKQIAKFVVGLGEKVAPTDVEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGAKESLEKLREVVELPLLHPERFLTLGIDPPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIIFFDEVDAIGGSRTSGDGDGGSDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTHILKIHAKTMAVDADIRYELLARLCPNTTGAELRSVCTEAGMFAIRGRRKSITEKDMIDAVNKVIKGYQKFSSTPKYMVYN 436
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: M4BLV6_HYAAE (AAA domain-containing protein n=44 Tax=Oomycota TaxID=4762 RepID=M4BLV6_HYAAE)

HSP 1 Score: 732 bits (1889), Expect = 2.420e-262
Identity = 367/440 (83.41%), Postives = 405/440 (92.05%), Query Frame = 2 
Query:  329 GACQTSNKKDYDDEE-----DD---APPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            G CQTSN K YD +E     DD    P   LD+GDIALLKTYGLGPY+  IK +E +I +A++ V +LIGIKESDTGLS PSQWDLVSDKQMMQEEQPLQVARCTKII+AG+++AKY+INV+QIAKFVVGLGEKV+PTD+EEGMRVGVDRTKY+++IPLPPKIDPTVSLMTVEDKPDVTY+DVGGAKDALEKLREVVELPLLHPERFV LGIDPPKGVLL+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDE+DAIGG+R+  ++ G DNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRKVEF LP+LEGR  IL IH+KSMN DR IR+EL++RLCPNTTGAELRSVCTEAGMFAIRAR+KS+SEKDFL++VNKVIKGY+KFSSTPKYMVYN
Sbjct:    4 GECQTSNSKSYDKDEGGDGDDDLLAGPETVLDDGDIALLKTYGLGPYSRVIKQVEDDIKKAQKAVNDLIGIKESDTGLSLPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEEEAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYAIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKDALEKLREVVELPLLHPERFVNLGIDPPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEVDAIGGARSSSEEGGTDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFNLPELEGRTQILKIHAKSMNCDRGIRFELVSRLCPNTTGAELRSVCTEAGMFAIRARRKSVSEKDFLESVNKVIKGYKKFSSTPKYMVYN 443
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: A0A7S0C5T3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C5T3_9STRA)

HSP 1 Score: 729 bits (1883), Expect = 2.060e-261
Identity = 367/434 (84.56%), Postives = 399/434 (91.94%), Query Frame = 2 
Query:  329 GACQTSNKKDYDDEEDDAPPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQ--DDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            G CQT N  D ++E++ APP  LDE DI LLKTYG+GPY   IKN E+EI + +E+VK LIGIKESDTGLS PSQWDLV DKQMMQEEQPLQVARCTKII   +  D AKYVINV+QIAKFVV LG+KVSPTD+EEGMRVGVDRTKYS++IPLPPKIDPTVSLMTVEDKPDVTY+DVGGAKDA+ KLREVVE PLLHPERFVTLGIDPPKGVLL+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSK+ACIVFFDE+DAIGG+RTGGD++G DNEVQRTMLQIVTELDGFD RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGR HIL IHSK M+ DRDIR+EL+ARLCPNTTGAEL SVCTEAGMF+IRAR+KS+SEKDFLD+VNKV+KGY+KFSSTPKYMVYN
Sbjct:   12 GECQTKNFNDNEEEDEHAPPP-LDESDIELLKTYGVGPYAVRIKNTEEEIQKQQEKVKNLIGIKESDTGLSPPSQWDLVGDKQMMQEEQPLQVARCTKIIPGEEQNDSAKYVINVKQIAKFVVALGDKVSPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKDAILKLREVVETPLLHPERFVTLGIDPPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKRACIVFFDEVDAIGGARTGGDENGSDNEVQRTMLQIVTELDGFDSRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRGHILKIHSKRMSCDRDIRFELLARLCPNTTGAELHSVCTEAGMFSIRARRKSVSEKDFLDSVNKVVKGYKKFSSTPKYMVYN 444
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: B5Y3S3_PHATC (Predicted protein n=5 Tax=Bacillariophycidae TaxID=33850 RepID=B5Y3S3_PHATC)

HSP 1 Score: 729 bits (1883), Expect = 2.300e-261
Identity = 368/445 (82.70%), Postives = 402/445 (90.34%), Query Frame = 2 
Query:  326 SGACQTSNKKDYDDEEDDAPPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKII----DAGQDDA--------KYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 1624
            SG CQT NK DYD+EE +  P  LDEGDI LLK+YGLGPY+T IK++EKEI + ++ VK+LIGIKESDTGLS PS WDL  DKQMM EE PLQVARCTKII    DA  + A        KYVINV+QIAKFVVGLGE V+PTD+EEGMRVGVDR+KYS++IPLPPKIDPTVSLMTVEDKPDVTY+DVGGAKDA+EKLREV+ELPLLHPERFVTLGIDPPKGVLL+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSK+ACI+FFDEIDAIGG+RTG D++G DNEVQRTMLQIVTELDGFD RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGR HIL IHSK MN DRDIR+ELIARLCPNTTGAEL SVCTEAGMFAIRAR+K++SEKDFL++VNKV+KGY+KFSSTPKYMVYN
Sbjct:    3 SGECQTGNKGDYDEEEKEDAPPPLDEGDIVLLKSYGLGPYSTKIKDVEKEIKKHQQTVKDLIGIKESDTGLSPPSMWDLNGDKQMMSEEAPLQVARCTKIITGDSDASNEGASSAVSTSTKYVINVKQIAKFVVGLGETVAPTDIEEGMRVGVDRSKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDDVGGAKDAMEKLREVLELPLLHPERFVTLGIDPPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKRACIIFFDEIDAIGGARTGSDENGSDNEVQRTMLQIVTELDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRGHILRIHSKRMNCDRDIRFELIARLCPNTTGAELHSVCTEAGMFAIRARRKNVSEKDFLESVNKVVKGYKKFSSTPKYMVYN 447
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BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Match: A0A485K5Q8_9STRA (Aste57867_1475 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5Q8_9STRA)

HSP 1 Score: 729 bits (1881), Expect = 1.450e-257
Identity = 361/431 (83.76%), Postives = 403/431 (93.50%), Query Frame = 2 
Query:  329 GACQTSNKKDYDDEED--DAPPAALDEGDIALLKTYGLGPYTTSIKNIEKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARCTKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYSVKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHPERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYM 1615
            G CQT N  +YD+E++  + P   LDEGDIALLKTYGLGPY+ SIK +E +I + ++ V +L+GIKESDTGLS PSQWDLVSDKQMMQEEQPLQVARCTKII+AG+DDAKY+INV+QIAKFVVGLGEKV+PTD+EEGMRVGVDRTKYS++IPLPPKIDPTVSLMTVEDKPDVTY++VGG KD+LEKLREVVELPLLHPERFV LGIDPPKGVLL+GPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDE+DAIGG+R+ G++ G DNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPAL+RPGRLDRKVEF +P+LEGR  IL IH+KSM+ DR+IR+ELIARLCPNTTGAELRSVCTEAGM+AIRAR+KS+SEKDFL++VNKVIKGYQKFSSTPKYM
Sbjct:    4 GECQTKNVNEYDNEDELNEPPTKVLDEGDIALLKTYGLGPYSRSIKAVEDDIKKVQQSVNDLVGIKESDTGLSIPSQWDLVSDKQMMQEEQPLQVARCTKIINAGEDDAKYMINVKQIAKFVVGLGEKVAPTDIEEGMRVGVDRTKYSIQIPLPPKIDPTVSLMTVEDKPDVTYDEVGGCKDSLEKLREVVELPLLHPERFVNLGIDPPKGVLLYGPPGTGKTLSARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKKACIVFFDEVDAIGGARSSGEEGGTDNEVQRTMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFNVPELEGRTQILQIHAKSMSCDRNIRFELIARLCPNTTGAELRSVCTEAGMYAIRARRKSVSEKDFLESVNKVIKGYQKFSSTPKYM 434
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJZ9_9PHAE6.320e-30597.71AAA domain-containing protein n=2 Tax=Ochrophyta T... [more]
A0A6V1T8U9_HETAK1.690e-27988.53Hypothetical protein n=2 Tax=Chattonellaceae TaxID... [more]
A0A836CGS4_9STRA1.690e-27990.99P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2CGH0_9STRA4.830e-27287.53Hypothetical protein n=3 Tax=Dictyochophyceae TaxI... [more]
A0A7S3JSE5_9STRA1.750e-26584.21Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YJ93_AURAN1.960e-26485.2226S proteasome ATPase subunit n=2 Tax=Pelagomonada... [more]
M4BLV6_HYAAE2.420e-26283.41AAA domain-containing protein n=44 Tax=Oomycota Ta... [more]
A0A7S0C5T3_9STRA2.060e-26184.56Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B5Y3S3_PHATC2.300e-26182.70Predicted protein n=5 Tax=Bacillariophycidae TaxID... [more]
A0A485K5Q8_9STRA1.450e-25783.76Aste57867_1475 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:919707..924790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score750.0
Seed ortholog evalue6.3e-214
Seed eggNOG ortholog4792.ETI47174
KEGG koko:K03061
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000502,GO:0000731,GO:0002020,GO:0002082,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006914,GO:0006919,GO:0006950,GO:0006974,GO:0007034,GO:0007041,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032984,GO:0032991,GO:0033036,GO:0033554,GO:0034098,GO:0034214,GO:0034404,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036435,GO:0036503,GO:0036513,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045732,GO:0045838,GO:0045862,GO:0045935,GO:0045937,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051788,GO:0051881,GO:0052547,GO:0052548,GO:0055086,GO:0060255,GO:0060828,GO:0061134,GO:0061136,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070647,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902494,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000116,GO:2000152,GO:2000158,GO:2001056,GO:2001169,GO:2001171
EggNOG free text desc.AAA domain (Cdc48 subfamily)
EggNOG OGs3QBEB@4776,COG0554@1,KOG0729@2759
COG Functional cat.O
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03051
Exons8
Model size1658
Cds size1311
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.264.1prot_D-herbacea_F_contig100.264.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig100 920378..924759 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927419.188179-UTR-D-herbacea_F_contig100:919706..9197671622927419.188179-UTR-D-herbacea_F_contig100:919706..919767Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 919707..919767 +
1690790161.0236423-UTR-D-herbacea_F_contig100:919706..9197671690790161.0236423-UTR-D-herbacea_F_contig100:919706..919767Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 919707..919767 +
1622927419.1986372-UTR-D-herbacea_F_contig100:920122..9203771622927419.1986372-UTR-D-herbacea_F_contig100:920122..920377Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 920123..920377 +
1690790161.035476-UTR-D-herbacea_F_contig100:920122..9203771690790161.035476-UTR-D-herbacea_F_contig100:920122..920377Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 920123..920377 +
1622927419.3275054-UTR-D-herbacea_F_contig100:924759..9247901622927419.3275054-UTR-D-herbacea_F_contig100:924759..924790Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 924760..924790 +
1690790161.1033478-UTR-D-herbacea_F_contig100:924759..9247901690790161.1033478-UTR-D-herbacea_F_contig100:924759..924790Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 924760..924790 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927419.2076976-CDS-D-herbacea_F_contig100:920377..9205511622927419.2076976-CDS-D-herbacea_F_contig100:920377..920551Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 920378..920551 +
1690790161.0430396-CDS-D-herbacea_F_contig100:920377..9205511690790161.0430396-CDS-D-herbacea_F_contig100:920377..920551Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 920378..920551 +
1622927419.2540832-CDS-D-herbacea_F_contig100:920979..9210931622927419.2540832-CDS-D-herbacea_F_contig100:920979..921093Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 920980..921093 +
1690790161.0511687-CDS-D-herbacea_F_contig100:920979..9210931690790161.0511687-CDS-D-herbacea_F_contig100:920979..921093Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 920980..921093 +
1622927419.2626636-CDS-D-herbacea_F_contig100:921566..9216681622927419.2626636-CDS-D-herbacea_F_contig100:921566..921668Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 921567..921668 +
1690790161.0616834-CDS-D-herbacea_F_contig100:921566..9216681690790161.0616834-CDS-D-herbacea_F_contig100:921566..921668Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 921567..921668 +
1622927419.2772396-CDS-D-herbacea_F_contig100:922348..9224441622927419.2772396-CDS-D-herbacea_F_contig100:922348..922444Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 922349..922444 +
1690790161.068488-CDS-D-herbacea_F_contig100:922348..9224441690790161.068488-CDS-D-herbacea_F_contig100:922348..922444Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 922349..922444 +
1622927419.2883272-CDS-D-herbacea_F_contig100:922775..9231361622927419.2883272-CDS-D-herbacea_F_contig100:922775..923136Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 922776..923136 +
1690790161.0770679-CDS-D-herbacea_F_contig100:922775..9231361690790161.0770679-CDS-D-herbacea_F_contig100:922775..923136Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 922776..923136 +
1622927419.3021414-CDS-D-herbacea_F_contig100:923928..9241101622927419.3021414-CDS-D-herbacea_F_contig100:923928..924110Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 923929..924110 +
1690790161.0866704-CDS-D-herbacea_F_contig100:923928..9241101690790161.0866704-CDS-D-herbacea_F_contig100:923928..924110Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 923929..924110 +
1622927419.3112302-CDS-D-herbacea_F_contig100:924477..9247591622927419.3112302-CDS-D-herbacea_F_contig100:924477..924759Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 924478..924759 +
1690790161.0954585-CDS-D-herbacea_F_contig100:924477..9247591690790161.0954585-CDS-D-herbacea_F_contig100:924477..924759Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 924478..924759 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig100.264.1

>prot_D-herbacea_F_contig100.264.1 ID=prot_D-herbacea_F_contig100.264.1|Name=mRNA_D-herbacea_F_contig100.264.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=437bp
MGDSGACQTSNKKDYDDEEDDAPPAALDEGDIALLKTYGLGPYTTSIKNI
EKEISEAKEQVKELIGIKESDTGLSQPSQWDLVSDKQMMQEEQPLQVARC
TKIIDAGQDDAKYVINVRQIAKFVVGLGEKVSPTDVEEGMRVGVDRTKYS
VKIPLPPKIDPTVSLMTVEDKPDVTYEDVGGAKDALEKLREVVELPLLHP
ERFVTLGIDPPKGVLLFGPPGTGKTLSARAVANRTDACFIRVIGSELVQK
YVGEGARMVRELFTMARSKKACIVFFDEIDAIGGSRTGGDDSGGDNEVQR
TMLQIVTELDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD
LEGRAHILHIHSKSMNVDRDIRYELIARLCPNTTGAELRSVCTEAGMFAI
RARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN*
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mRNA from alignment at D-herbacea_F_contig100:919707..924790+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig100.264.1 ID=mRNA_D-herbacea_F_contig100.264.1|Name=mRNA_D-herbacea_F_contig100.264.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5084bp|location=Sequence derived from alignment at D-herbacea_F_contig100:919707..924790+ (Desmarestia herbacea DmunF female)
CAGTGCCCAGCGCTAGACCAAGTGCAAGTATCGGGGAGAGAAACAGAGCT
TATCCATCAAGGTAGGTCAGCTATGATTGTGCAAGTTGAAGATGCTAAAG
TGCTTGTGGCGGTAGAGGAAACACGAAAAGGGAATTAACCTGAAGGCGGC
TTTCGTATTTTCTCTCGAAAAGTTTTGCACACAGAAAACTGGAGAACCCT
CATCGTCGACGAACATTCCCTTCGTACCCACCTATTGGTTTGGCTTGCCT
CTCTGCATCTTGGCCAAAGCTCAGTGGCTTACTACAGAGAAGAGGGGAAC
TTAGGAATCTCTTTAAAGTGGCACTTGTGTTCTCGCCGCTGCATTTTTGG
TCATCCGCATGCCAATTTCGCTTGTTTTGCCCTTTCTTTTATTGTGTGTT
TTGCGTTTTTCTCAAGGGATCCACGAAACGTGCTACACGCCGCATTAGAC
GTTGCTTGTTACAGAGTACTCGTGATTTCCGAGAACCGCCAGCGCAACGG
CAGAGGCGTGCTACGGAAGGAGGGCAACAGCGGTAGACTGGGCCGAGGGC
TGCGAACATCACTCAACTGATCAGACGTTGCAAGAGAAACGCCAGCCGAG
GACGATAAAGACAGTTTGTTGTATCATAAGGAGATAGACAGGCAGCCAAA
ACAGCAGAACTAGCATCAACCATGGGCGACTCGGGGGCATGCCAGACTTC
CAACAAGAAGGACTACGATGACGAGGAGGACGACGCACCGCCGGCGGCGC
TCGACGAGGGAGACATCGCGCTTCTGAAAACGTATGGCCTGGGTCCTTAC
ACAACGTCGATCAAGAACATCGAAAAAGAAATCAGTGAGGCCAAGGTAAG
GCGACAACAGCGCTTGTAGGGTATCGTATCATGGGTAGTAGTCGTAGTGT
CGTAGTGCAGCTGCAGCGGCTGTGCACCTCCGTGATGCTGCCGCGACGTT
GCGGGTATGCCCTTGCATACCATACTTCGGCACGTTCGCGGGATTTTCGC
ATGCCAAACTATATCTAACGGTGCCTCTTGGGAATGGCTCCAGTTCCCAT
CGGCCGTGCCTACCTGTGCACACTATGCGTATATGTTTACAGGATAATAC
CGCCTGTATTGTACTAGTGTTTTGTTGTCGTGGTCGTTACGTGCCGTGCA
GTGCGGTTGCCGGCCTCGTCGTGATTATCGAAACTACCGTTGACGTATCA
TACGAGCACAATAAGGTTTGCTCCAATTGTTGTGCTCCAAGCTGAATTAT
GTGAACAACACTGGGCTTTGCAGGAACAAGTGAAGGAGCTGATTGGCATA
AAGGAGTCGGACACAGGACTGTCGCAGCCCAGCCAATGGGACCTCGTATC
GGACAAGCAGATGATGCAGGAAGAGCAGCCGCTCCAGGTGCGACCTGCGC
CCTTTTCCCCCATCCCCCCATGCCCCCACTCGCAGATTGGGTGGGATTGT
GATTGTTTTGATATCTTGGTGTCTCGAGAAATTTATGGTTGAACGGATGC
AGGACCCTAAGATTTCCAACCAACTAGCTTCTCTCATTAGTATAGCGATA
TACTGCGCTGTGATACCTCATGCGCTCAAAGTTGGCCTGGACGATGTGCA
AGGGTTTGCACTTGGATCACTGGCCGTCCCTGACAGTGCCAGCTCTTCCT
CGTGAAACCCAGCGGTTGCACGCACAACGAACCGCCTTTGTGTTTCCATC
TTGTTTGCATGACCGTCGGTGCTCTGTTGAAATGCCAAGCGTGCTTGTGG
GTTGCTTTGCTCTGCTTTGCTTCAATTTTGTTATTTTTTTAGCTTTCAGG
AATGGCACCGGCCGTTGTTGTCGTTCATCACATGCAGATCCCCTCGTCGT
TTGTCGGCAGGTGGCGCGATGCACAAAGATCATCGACGCGGGGCAGGACG
ACGCGAAGTACGTGATCAACGTGCGGCAGATCGCCAAGTTCGTCGTCGGG
CTAGGAGAAAAGGTTGGGCTAAGGACAAAAAGGCCTTTTCTTGGCGGCAC
TTTTTTCCGAAGCGGGGTGTTTCTCCGTGCGACGTATGTATGCTATCAAT
ATCATATATCTCTTCTCCTGTTCCTTCTTACGGGTCGAGCCGCCTTAGCG
CTTTTGTAGGCTGGATCTTTAGATGTTTTGTTTTATTAGATGTATGATTA
GTATCAACGTAAGCTGTTCAGCAGTTTCGGAAATTCTACCACGAACCCTA
ACCCGAACCGTAACGAACACACTTTACTAATATAAGGTTAAAAACCTCTG
TAAAGTTCCTGTGAAATCCCGTCCTACGACAACGCTAAACCTACTGGACA
GGCCTGTCTGTCTTTCGAAGTGTTGCGACGGCACGCCCGGTGCTATTCAA
CGAAAGGACCACCAAACGAGTTCCCCCAAACGATGGGCAGGGAAACAAAT
TTGTGTGGCCATCGACTGTTGTTGTCAAAATAAGCGCCTGAAACATGAAA
AAAATACTCTGAATGGATCACTCGAATAGACCCCCACTTAGCATCCCCCC
CTTCACATAGAGTACCCATGTAGCTCTTGTTGACTATCTTTATTGTGGAT
GATCCACTGTCCCTCTACTACCGTGGGTGACCCACTCTTCCCGCTATCGG
GGTACGCGCGCCCCTCATTTCTGGCGAATTTTACGTTGCCAGGTGTCACC
CACGGACGTGGAGGAGGGCATGCGCGTTGGCGTGGACCGTACCAAGTACT
CGGTAAAGATTCCACTGCCGCCCAAGATCGACCCAACGGTGAGTTTTTCA
TTGTTTTTTGTTTTAGTTTAATTATTACTGTTGTACCGGTTTGCACGCAA
CATGGTTATGAGGTTAGGCTTATTTGTTCGGATGGACTACTGTGTACCCG
TGGACGGAACCATGATTTTTTACTGACGTCCGGAATTCGTATGTATATCT
GTTTTCTGTTTTTCAGGGTTCGATTGTAGTATTGGATTATGTGGGATGAT
GTTTTGTGTACCCCTGCCACCATGCCATGTACGGCACCATCCTGACTCTT
CCAGACCCCACATGGACTAATGTCCCCCTTTTGCTCTTCCTCTCTACAAT
GCCACCATACTTTGTTTAGGTGAGCCTCATGACGGTGGAGGACAAGCCGG
ATGTAACCTACGAGGACGTGGGCGGAGCCAAGGACGCCCTCGAAAAGCTT
CGCGAGGTGGTCGAACTCCCACTGCTTCACCCGGAGCGTTTTGTAACTCT
CGGCATCGACCCTCCCAAGGGCGTGCTGCTCTTCGGCCCTCCGGGGACGG
GGAAGACGCTGTCGGCGAGAGCGGTGGCTAACCGTACGGACGCGTGCTTC
ATCCGGGTGATCGGGAGCGAGCTGGTGCAGAAGTATGTGGGGGAAGGGGC
GCGCATGGTGCGAGAGCTGTTTACGATGGCGAGGAGCAAGAAGGCGTGCA
TCGTGTTTTTTGACGAGATCGACGCAATTGGTGAGCGATGATGTAACAGA
CTTTTGTCTGTGTGCGTGGTCGTCGAAAACGTTTAACCAAATAAACGCCC
CTCCTTTGTTTTTGTCAAGGTATCGTACTGGCGATTTTGTAGTGCCCTGA
GGGGTGTTTGCTGTCTTGTGATGGAGTGAAATCTGTTGCGAGCGTGCGTA
TGCTGTATCAGCGGCGTGTGATACGATAAGAGATGCCATAGTGTCCTGTG
GAGCGGGTGCGAGGGGCAAGGTGGGGACAGGTAGGGGTAGAGAGGGGCGG
GCGCGATACGTGATTTCTCGGTATGGTATTCGATATTAGACGTCGCACTC
CTTCAGCGCCGGTGACATTTTCGAGACGATGGGGGTTGCGTCTGCGCAGG
CTGCGTTTCACAAACAATACTATACGTTGCAGCTGCTACAATATGACGGT
CATTCATTATCGTTGCGTTGCTACGCTCGGTGGGTGACTGGTATTGCTCT
CTTTCTTCTCACTTGGGACTGTCGCGGCGTCCCCATATCTCGCTTACAAG
CTAAACGGCAAAGCTGAATTGTCATACTGTGTGTTATTACTACGTTTACA
AAGTAACACATGTAGATAGTGTGCCGAGAGGTCGACTTTGTTTCTTCGGT
CAACCGTGTGCTTTTGAAAACTTCCGTGATGGTGTCACGGTACGGTGCAT
GTGGTACTTGCCGTGTACAGGGACAGCTTTATTTTTGCCGAGAATGACGC
TTTCCAGTGTGTTGTCAGGAAGCTTACGTCGTTTCCCGCCGGATGCGGAT
TTTGTTTCCTTTTGTTTGGAAGGTGGAAGCCGGACAGGAGGGGATGACAG
CGGGGGGGACAACGAGGTGCAGCGTACCATGCTCCAGATTGTGACGGAGC
TAGACGGCTTCGACCCCAGGGGTAATATCAAGGTCCTCATGGCGACAAAC
CGTCCGGATACCTTGGACCCTGCGCTGCTGCGCCCGGGGCGCTTGGACCG
AAAGGTAAGACGCGGTCACGTAGGAGCTGGGCAGGGGGGGGGGGGAGGGG
GGCAGCTGTGCCATGGTAATGTTGTATGTCTGTGGCGAAGCATATTCTAG
CGGCACGAGCAGCCGACCTGCGAGCGCCGCGGGTAGAGCTGACAGAAGTT
GTGCGTGTGGGCCGGAGGTTGTTCGATTGCCGAGCCTGTTATGCAAGCAT
CTCAAGTGGGCAGTAACGTGCCCCCCCCCGGGCGCGGTCAATGGTCAAAC
TACTAAGGCAAGCAACAAAGGAGTACGCCCCCCCCCGCGGGCGCGTTTGT
AACCGTGTTACACGTCACGAGTAACGGACAATCCGTCAACCATTTTTGAT
TGTCGCAACCGTTCGCTTCAGGTGGAGTTCGGGTTGCCCGACCTGGAAGG
GCGGGCGCACATCCTCCACATCCACTCCAAGTCCATGAACGTGGACCGAG
ACATCCGCTACGAGCTCATCGCTCGGCTCTGCCCCAACACTACTGGGGCG
GAGCTCCGGTCGGTGTGCACAGAAGCGGGCATGTTCGCGATCCGCGCGCG
TAAGAAATCCATATCGGAGAAGGATTTCTTGGACGCGGTGAACAAGGTTA
TCAAGGGCTACCAGAAGTTCTCCTCCACTCCCAAGTACATGGTATACAAT
TAAGGGTTCGGAGTAGGGGCATCGGGGAGCGGGG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig100:919707..924790+

>mRNA_D-herbacea_F_contig100.264.1 ID=mRNA_D-herbacea_F_contig100.264.1|Name=mRNA_D-herbacea_F_contig100.264.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2622bp|location=Sequence derived from alignment at D-herbacea_F_contig100:919707..924790+ (Desmarestia herbacea DmunF female)
ATGGGCGACTCGGGGGCATGCCAGACTTCCAACAAGAAGGACTACGATGA
CGAGGAGGACGACGCACCGCCGGCGGCGCTCGACGAGGGAGACATCGCGC
TTCTGAAAACGTATGGCCTGGGTCCTTACACAACGTCGATCAAGAACATC
GAAAAAGAAATCAGTGAGGCCAAGATGGGCGACTCGGGGGCATGCCAGAC
TTCCAACAAGAAGGACTACGATGACGAGGAGGACGACGCACCGCCGGCGG
CGCTCGACGAGGGAGACATCGCGCTTCTGAAAACGTATGGCCTGGGTCCT
TACACAACGTCGATCAAGAACATCGAAAAAGAAATCAGTGAGGCCAAGGA
ACAAGTGAAGGAGCTGATTGGCATAAAGGAGTCGGACACAGGACTGTCGC
AGCCCAGCCAATGGGACCTCGTATCGGACAAGCAGATGATGCAGGAAGAG
CAGCCGCTCCAGGAACAAGTGAAGGAGCTGATTGGCATAAAGGAGTCGGA
CACAGGACTGTCGCAGCCCAGCCAATGGGACCTCGTATCGGACAAGCAGA
TGATGCAGGAAGAGCAGCCGCTCCAGGTGGCGCGATGCACAAAGATCATC
GACGCGGGGCAGGACGACGCGAAGTACGTGATCAACGTGCGGCAGATCGC
CAAGTTCGTCGTCGGGCTAGGAGAAAAGGTGGCGCGATGCACAAAGATCA
TCGACGCGGGGCAGGACGACGCGAAGTACGTGATCAACGTGCGGCAGATC
GCCAAGTTCGTCGTCGGGCTAGGAGAAAAGGTGTCACCCACGGACGTGGA
GGAGGGCATGCGCGTTGGCGTGGACCGTACCAAGTACTCGGTAAAGATTC
CACTGCCGCCCAAGATCGACCCAACGGTGTCACCCACGGACGTGGAGGAG
GGCATGCGCGTTGGCGTGGACCGTACCAAGTACTCGGTAAAGATTCCACT
GCCGCCCAAGATCGACCCAACGGTGAGCCTCATGACGGTGGAGGACAAGC
CGGATGTAACCTACGAGGACGTGGGCGGAGCCAAGGACGCCCTCGAAAAG
CTTCGCGAGGTGGTCGAACTCCCACTGCTTCACCCGGAGCGTTTTGTAAC
TCTCGGCATCGACCCTCCCAAGGGCGTGCTGCTCTTCGGCCCTCCGGGGA
CGGGGAAGACGCTGTCGGCGAGAGCGGTGGCTAACCGTACGGACGCGTGC
TTCATCCGGGTGATCGGGAGCGAGCTGGTGCAGAAGTATGTGGGGGAAGG
GGCGCGCATGGTGCGAGAGCTGTTTACGATGGCGAGGAGCAAGAAGGCGT
GCATCGTGTTTTTTGACGAGATCGACGCAATTGGTGAGCCTCATGACGGT
GGAGGACAAGCCGGATGTAACCTACGAGGACGTGGGCGGAGCCAAGGACG
CCCTCGAAAAGCTTCGCGAGGTGGTCGAACTCCCACTGCTTCACCCGGAG
CGTTTTGTAACTCTCGGCATCGACCCTCCCAAGGGCGTGCTGCTCTTCGG
CCCTCCGGGGACGGGGAAGACGCTGTCGGCGAGAGCGGTGGCTAACCGTA
CGGACGCGTGCTTCATCCGGGTGATCGGGAGCGAGCTGGTGCAGAAGTAT
GTGGGGGAAGGGGCGCGCATGGTGCGAGAGCTGTTTACGATGGCGAGGAG
CAAGAAGGCGTGCATCGTGTTTTTTGACGAGATCGACGCAATTGGTGGAA
GCCGGACAGGAGGGGATGACAGCGGGGGGGACAACGAGGTGCAGCGTACC
ATGCTCCAGATTGTGACGGAGCTAGACGGCTTCGACCCCAGGGGTAATAT
CAAGGTCCTCATGGCGACAAACCGTCCGGATACCTTGGACCCTGCGCTGC
TGCGCCCGGGGCGCTTGGACCGAAAGGTGGAAGCCGGACAGGAGGGGATG
ACAGCGGGGGGGACAACGAGGTGCAGCGTACCATGCTCCAGATTGTGACG
GAGCTAGACGGCTTCGACCCCAGGGGTAATATCAAGGTCCTCATGGCGAC
AAACCGTCCGGATACCTTGGACCCTGCGCTGCTGCGCCCGGGGCGCTTGG
ACCGAAAGGTGGAGTTCGGGTTGCCCGACCTGGAAGGGCGGGCGCACATC
CTCCACATCCACTCCAAGTCCATGAACGTGGACCGAGACATCCGCTACGA
GCTCATCGCTCGGCTCTGCCCCAACACTACTGGGGCGGAGCTCCGGTCGG
TGTGCACAGAAGCGGGCATGTTCGCGATCCGCGCGCGTAAGAAATCCATA
TCGGAGAAGGATTTCTTGGACGCGGTGAACAAGGTTATCAAGGGCTACCA
GAAGTTCTCCTCCACTCCCAAGTACATGGTATACAATTAAGTGGAGTTCG
GGTTGCCCGACCTGGAAGGGCGGGCGCACATCCTCCACATCCACTCCAAG
TCCATGAACGTGGACCGAGACATCCGCTACGAGCTCATCGCTCGGCTCTG
CCCCAACACTACTGGGGCGGAGCTCCGGTCGGTGTGCACAGAAGCGGGCA
TGTTCGCGATCCGCGCGCGTAAGAAATCCATATCGGAGAAGGATTTCTTG
GACGCGGTGAACAAGGTTATCAAGGGCTACCAGAAGTTCTCCTCCACTCC
CAAGTACATGGTATACAATTAA
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