mRNA_D-herbacea_F_contig100.255.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: D7FI09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI09_ECTSI) HSP 1 Score: 496 bits (1277), Expect = 3.130e-175 Identity = 235/315 (74.60%), Postives = 273/315 (86.67%), Query Frame = 1
Query: 1 MGRGVAYKYGVKQVPPTMTTCTTEAFSNVERGDYHVPDRRGVSAKHFSAKPQDRSKPFLHNTAYENDFVDFSEASTQIHKGLHNMNRLQADGESSFKREFDRLDKGNGVVEMRDMPRLIEGVLGRGVRPWIKDRILKMFEANRDGKVSWLDLQDGLRKVMTSTRTDVSFRERELPEWLVSNRQIKPAVTHGESTQSCYQTDMGKYGQNPRNRRVWYKTGMSSTTVDLFDGTTKETCQVPGYGGFIPASKMNARAREHGDMRNPRRKPLDLRLFYRHNAPGYTGHAPSAACNDPGPARCGANPITTSGAASLGLIL 945
MGRGVAY+ GV PPTMTTC++EAFSNV RGDY VPDRRGVSAKHFSAKPQDRSKPFLH++ YE+DF +FS+ + G + DGE++FKREFDRLD GNGVV +RDMP+LI+GVLGR VRPWI DRILKMFEA RDGKV+WLDLQDGLRKV S R+DVS++ERE+PEWLV+NR++ PAVTHG+ T+SCYQ DMGK G+ PR+RR+WYKTGMSSTT+DLF+GTTK T QVPGYGGFIPASKMN RAREHGDM+N RR LDLRLFYRHN PGYTGHAP+AACNDPGP+RCG++P+TTSGAA+LG+IL
Sbjct: 1 MGRGVAYENGVALAPPTMTTCSSEAFSNVTRGDYQVPDRRGVSAKHFSAKPQDRSKPFLHDSLYEHDFRNFSDEVDGLDGG-EGPRGGERDGENAFKREFDRLDAGNGVVHIRDMPKLIQGVLGRDVRPWILDRILKMFEAKRDGKVTWLDLQDGLRKVAESARSDVSYKEREMPEWLVANRKVMPAVTHGQVTESCYQMDMGKDGEIPRDRRIWYKTGMSSTTLDLFEGTTKATYQVPGYGGFIPASKMNLRAREHGDMKNSRRPRLDLRLFYRHNNPGYTGHAPAAACNDPGPSRCGSDPLTTSGAAALGIIL 314
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: A0A835ZLH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLH4_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.930e-63 Identity = 132/344 (38.37%), Postives = 189/344 (54.94%), Query Frame = 1
Query: 1 MGRGVAYKYGVKQVPP-----TMTTCTTEAFSNVERGDYHVPDRRGVSAKHFSAKPQDRSKPFLHNTAYENDFVD-------FSEASTQIHKG--LHNMNRLQAD-----GESSFKREFDRLDK---------GNGVVEMRDMPRLIEGVLGRGVRPWIKDRILKMFEANRDGKVSWLDLQDGLRKVMTSTRTDVSFRERE-LPEWLVSNRQIKPAVTHGESTQSCYQTDMGKYGQNPRNRRVWYKTGMSSTTVDLFDGTTKETCQVPGYGGFIPASKMNARAREHGDMRNPRRKPLDLRLFYRHNAPGYTGHAPSAACNDPGPARCGANPITTSGAASLGLIL 945
+G GV Y G PP T+ T + E+ S+V + D+ P +RG A +A R+KPFLH+T ++ + D F+ AS + ++ L +QA G S + +++ +P L+ V + R W+ DR+ K E +R G+V W L +V+++ D S R +PEW++ +R+ P + HG+ SCYQ D+G G P R++ +K GM TT DLF+GTTK+T VPGYGGFIPASK+NARA +HGDM++ R +LRLF++HN GYTGH AACND G CG +P TTSGAA+LGL+L
Sbjct: 46 VGHGVQYNEG----PPIDEHATIKTVSAESTSHVTKQDFRPPGKRGCQAATAAAAVA-RTKPFLHSTLHKESYRDINQEIEGFAAASVEAYRCAFLAAARDVQATSISLCGSSGXXXXXXXXXXXXXXSEGPMASPTIDVNQIPGLLVAVHSKPPR-WLADRLRKACEGDRSGQVRWDTFVAALARVLSTASKDGSLLVRTAMPEWVLISRKAHPTIQHGKRITSCYQHDVG--GAAPAQRQLTFKRGMRGTTQDLFEGTTKDTFHVPGYGGFIPASKVNARAMQHGDMQDARAYSANLRLFHKHNMAGYTGHQGHAACNDRGELLCGTHPATTSGAAALGLLL 381
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: A0A7S2FHF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHF5_9STRA) HSP 1 Score: 131 bits (329), Expect = 9.140e-33 Identity = 69/160 (43.12%), Postives = 93/160 (58.13%), Query Frame = 1
Query: 460 DGLRKVMTSTRTDVSFRERELPEWLVSNRQIKPAVTHGESTQSCYQTDMGKYGQNPRNRRVWYKTGMSSTTVDLFDGTTKETCQVPGYGGFIPASKMNARAREHGDMRNPRRKPLDLRLFYRHNAPGYTGHAPSAACNDPGPARCGANPITTSGAASLGL 939
D R T+T ++ +PEW+ +++ I V + +S YQTDMG + P +R KTGM+ TT DL GTTK T +PG+ G IP ++ N R HGD + P LRL++RHN PGYTG P+ A ND G GANP T+SGA++LGL
Sbjct: 105 DTFRDPQTTT-----YQGATVPEWVTASKAITEDVVPRQPVRSSYQTDMGMANEKPLDRPYISKTGMAGTTQDLCAGTTKATYHIPGFSGHIPTTQRNPRVVAHGDGQKVHDMPSHLRLYHRHNMPGYTGFRPTNAKNDKGERHSGANPATSSGASALGL 259
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: A0A067C8F9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8F9_SAPPC) HSP 1 Score: 129 bits (325), Expect = 2.150e-31 Identity = 100/301 (33.22%), Postives = 140/301 (46.51%), Query Frame = 1
Query: 73 AFSNVERGDYHVPDRRGVSAKHFSAKP--QD--RSKPFLHNTAYENDFVDFSEASTQIHKGLHNMNRLQADGESSFKREFDRL--------DKGNGVVEMRDMPR-----LIEGVLGRGVRPWIKDRILKMFEANRDGKVSWLDLQDGLRKVMTSTRTDVSFRERELPEWLVSNRQIKPAVTHGESTQSCYQTDMGKYGQNPRNRRVWYKT-GMSSTTVDLFDGTTKETCQVPGYGGFIPASKMNARAREHGDMRNPRRKPLDLRLFYRHNAPGYTGHAPSAACNDPGPARCGANPITTSG 921
AF +V R D+ + + + AKP D K FL + YE+DFV FS ++ L A + FKR F+ L N V+ +PR L+ V G + + MF+ DG V+W ++ + ++ V + P W+ + +H S S +Q D G YG +P R +T GM+STT DL DGTTK TC +P YGGF+P + N A GD PR K DLRL++ +N PGYTGH P A N G A G +P +T+G
Sbjct: 51 AFGSVYRADFGLVTPADYNTR--LAKPCYDDVVAGKKFLGQSLYESDFVHFS----------NHGKALLAKPKDDFKRVFEALAHAVDQDDTTNNAAVDELRLPRDRMKELLTTVYGSPPSTRLLEMYSHMFDPIPDGYVTWPVFEEAMDRIHLFVANSVGKLHGK-PSWIEYLSMRRLVTSHVPS--SSHQIDYGTYGSDPLARPYLSRTLGMASTTSDLADGTTKNTCHIPRYGGFLPEAPHNPIAVAQGDGTAPRNKGADLRLYHLNNIPGYTGHKPVDAKNVRGEATTGTDPRSTNG 336
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: A0A7S1C2K7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2K7_9STRA) HSP 1 Score: 119 bits (297), Expect = 3.580e-27 Identity = 94/292 (32.19%), Postives = 144/292 (49.32%), Query Frame = 1
Query: 43 PPTMTTCTTEAFSNVERGDYHVPDRRGVSAKHFSAKPQDRSKP--FLHNTAYENDFVDFSEASTQIHKGLHNMNRLQADGESSFKREFDRLDKGNGVVEMRDMPRLIEGVLGRGVRPWIKDRILKMFEA----NRDGKVSWLDLQDGLRKVMTSTRTDVSFREREL--PEWLVSNRQIKPAVTHGESTQSCYQTDMGKYGQNPRNRRVWYKTGMSSTTVDLFDGTTKETCQVPGYGGFIPASKMNAR----AREHGD---MRNPRRKPLDLRLFYRHNAPGYTGHAPSAACN 873
P T T E V+ Y VPD+ GV A K KP F+ +A FVDF+ + ++ K + E+ FKR FDR +G +++R++P L+ + G P +R+ ++F+A NRDGKVSW + ++G+ +V + + + L P W+ + PAV +S +G+ G++P R + +GM+STT DLF+GT+K T Q+PGYGGFIP + M ++ A E R+ +L L PGYTGH S A +
Sbjct: 63 PAVPGTLTAETQRYVKPKHYKVPDKLGVMA----GKSHQLPKPARFVAQSASAATFVDFAAQAGRLAK------MSDEEVEAYFKR-FDR--DNSGYLDLREVPALLGDLYGAPEAP---ERVRRLFDAYFDDNRDGKVSWEEFRNGVARVRKAMEVESRPKGPRLRGPAWV---GKPVPAVIGPGERKSAAMAYVGEDGEDPAARPLAEGSGMASTTKDLFEGTSKRTLQLPGYGGFIPIAAMGSKFAGEAMEQAQGSAERDTFHAKTNLTLTITGGTPGYTGHISSFAAH 335
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: A0A7S2S8A6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8A6_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.090e-24 Identity = 54/143 (37.76%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 523 PEWLVSNRQ--IKPAVTHGESTQSCYQTDMGKYGQNPRNRRVWYKTGMSSTTVDLFDGTTKETCQVPGYGGFIPASKMNARAREHGDMRNPRRKPLDLRLFYRHNAPGYTGHAPSAACNDPGPARCGANPITTSGAASLGLIL 945
PEWL +++Q ++P + +S YQ D G + +++ +K GM++TT+DL +GT K+T +PGY G IP ++ N D PR+ +LRL+++HN GYTGH P+ A ND G G + +T SGA+++G++L
Sbjct: 116 PEWLTASKQTLVEPMARY--PVRSSYQKDFGISVDSMKDKPYLHKNGMATTTLDLNEGTAKQTHHIPGYSGTIPVNRRNEDIVRQSDAAEPRKVASELRLYHKHNMTGYTGHNPTHASNDYGVRLSGCSTLTMSGASAVGMML 256
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: A0A7S2S846_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S846_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.900e-19 Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 655 GMSSTTVDLFDGTTKETCQVPGYGGFIPASKMNARAREHGDMRNPRRKPLDLRLFYRHNAPGYTGHAPSAACNDPGPARCGANPITTSGAASLGLIL 945
GM++TT+DL +GT K+T +PGY G IP ++ N D PR+ +LRL+++HN GYTGH P+ A ND G G + +T SGA+++G++L
Sbjct: 5 GMATTTLDLNEGTAKQTHHIPGYSGTIPVNRRNEDIVRQSDAAEPRKVASELRLYHKHNMTGYTGHNPTHASNDYGVRLSGCSTLTMSGASAVGMML 101
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: A0A7S3N7H6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3N7H6_9SPIT) HSP 1 Score: 66.2 bits (160), Expect = 6.890e-10 Identity = 33/92 (35.87%), Postives = 47/92 (51.09%), Query Frame = 1
Query: 592 YQTDMGKYGQNPRNRRVWYKTGMSSTTVDLFDGTTKETCQVPGYGGFIPASKMNARAREHGDMRNPR---RKPLDLRLFYRHNAPGYTGHAP 858
Y +G YG NPRN M + DL GTTK TC +PGYGGF+ + +N +A +H R + ++L + PGY+G+ P
Sbjct: 36 YHNTLGNYGHNPRNILNHKSEKMENDVNDLTMGTTKATCHIPGYGGFLVKTDLNDKAIDHSKSNTSRQIMKNKVNLNENFNVKLPGYSGYKP 127
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Match: A0A7S1WYU4_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1WYU4_9CHLO) HSP 1 Score: 67.8 bits (164), Expect = 2.550e-9 Identity = 44/104 (42.31%), Postives = 50/104 (48.08%), Query Frame = 1
Query: 586 SCYQTDMGKYGQNPRNRRVWYKTGMS--STTVDLFDGTTKETCQVPGYGGFIPASKMNARAREHGDMRNPRRKPLDLRLFY------RHNAPGYTGHAPSAACN 873
S Y + G YG +P R M+ STT +L GTT+ T QVPGY GF+PASK N RA EHG PR L Y R P Y G P A N
Sbjct: 93 STYTVNFGSYGHDPMTRTAASHKDMTMTSTTHELNLGTTRTTRQVPGYSGFMPASKKNDRAVEHGMGAIPRSSAKTDMLLYSLDQYSRERVPKYLGSRPQANRN 196 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig100.255.1 >prot_D-herbacea_F_contig100.255.1 ID=prot_D-herbacea_F_contig100.255.1|Name=mRNA_D-herbacea_F_contig100.255.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=316bp MGRGVAYKYGVKQVPPTMTTCTTEAFSNVERGDYHVPDRRGVSAKHFSAKback to top mRNA from alignment at D-herbacea_F_contig100:814643..817961- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig100.255.1 ID=mRNA_D-herbacea_F_contig100.255.1|Name=mRNA_D-herbacea_F_contig100.255.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3319bp|location=Sequence derived from alignment at D-herbacea_F_contig100:814643..817961- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig100:814643..817961- >mRNA_D-herbacea_F_contig100.255.1 ID=mRNA_D-herbacea_F_contig100.255.1|Name=mRNA_D-herbacea_F_contig100.255.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1896bp|location=Sequence derived from alignment at D-herbacea_F_contig100:814643..817961- (Desmarestia herbacea DmunF female)back to top |