|
|
Homology
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: A0A6H5JLB0_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB0_9PHAE) HSP 1 Score: 188 bits (477), Expect = 2.850e-56 Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 1
Query: 85 EEEPCAFAKLWGQLDGKPFHCYMMSLPTILGRGSTATEGSRKPAGFIDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFLLPEK 432
++EPCAFAKLWGQLDG PFH Y+ LP+ LGRGS ATEG+RK AGFIDLG+SKALSREHA ITWVP ++Y I C+SKNGMVV G Y AKGGVE L+SR PIKLGPA MYFLLPE+
Sbjct: 8 DDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPER 123
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: D7FHX7_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX7_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.320e-55 Identity = 87/116 (75.00%), Postives = 98/116 (84.48%), Query Frame = 1
Query: 85 EEEPCAFAKLWGQLDGKPFHCYMMSLPTILGRGSTATEGSRKPAGFIDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFLLPEK 432
++EPCAFAKLWGQLDG PFH Y+ LP+ LGRGS ATEG+RK AGFIDLG+SKALSREHA ITWVP ++Y I C+SKNGMVV G Y AKGGVE L+SR PIKLGPA MYFLLPE+
Sbjct: 8 DDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPER 123
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: A0A024GCA3_9STRA (FHA domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCA3_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 5.560e-19 Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 1
Query: 31 PNTTSHKGREAEMVVQHNEEEP-CAFAKLWGQL-DGKPFHCYMMSLPTILGRGSTATEGSRKPAGF-IDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFL 420
PN + + + + E+ P A+AKL G++ D + F + LPT LGRG +G I LG+ KA+SR+HA I W + + CL KNG+ VNG + AK V L S+TPI++GPA +YFL
Sbjct: 5 PNVPTIEEKRKSLEKYFTEKRPPLAYAKLSGRIADDQAFEALITHLPTELGRGPIVPSSGPVASGSRISLGEQKAISRQHAKILWNAEKCCFEMECLGKNGLFVNGSFIAKNQVIPLTSKTPIRIGPARLYFL 137
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: F0W989_9STRA (Uncharacterized protein AlNc14C39G3356 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W989_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.670e-18 Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 1
Query: 94 PCAFAKLWGQL-DGKPFHCYMMSLPTILGRGSTATEGSRKPAGF-IDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFL 420
P A+AKL G++ D + F + LPT LGRG +G I LG+ KA+SR+HA I W + + CL KNG+ VNG + K V L S+TPI++GPA +YFL
Sbjct: 27 PLAYAKLSGRIADDQVFEALITHLPTELGRGPIVPPSGTVASGARISLGEQKAISRQHAKIFWNTEKCCFEMECLGKNGLFVNGSFVTKDQVIPLTSKTPIRIGPARLYFL 137
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: A0A1R2C7H0_9CILI (FHA domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C7H0_9CILI) HSP 1 Score: 70.5 bits (171), Expect = 5.090e-12 Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = 1
Query: 37 TTSHKGREAEMVVQHNEE--EPCAFAKLWGQLDGKPFHCYMMSLPTILGRGSTATEGSRKPAGFIDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFLLP 426
T +AE+++ + P +AKL+G K C + ILGR T K FI LG K +SR+HA I W + I + KN ++VN + L +TPIK+GPA YFLLP
Sbjct: 27 TQDRPEEKAEIILPMKRQATNPSGYAKLYG----KEISCIIQYTEVILGR----TNPKNKKECFIPLGDHKKISRKHAKIFWNTDKGCFQIQNIGKNPIIVNKVDVLSNEIVDLLGKTPIKIGPACFYFLLP 150
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: A0A0G4IN48_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IN48_PLABS) HSP 1 Score: 69.3 bits (168), Expect = 2.490e-10 Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 100 AFAKLWGQLDGKPFHCYMMSLPTILGRGSTATEGSRKPAGFIDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEA-LKSRTPIKLGPALMYFLLPEKRS 438
AFAKL G D H Y+ LGR + ++ + LG +K +SR HA I W P ++ +TCLSKNG+ V+G+ L SRT I++GP L+YFLLP+ S
Sbjct: 5 AFAKLLG--DNNFVH-YVTKETLTLGRTAAQSD--------VVLGDNKNISRCHARIAWNPDTSSFELTCLSKNGVFVDGQLSGPSNPPVPLHSRTLIQIGPRLIYFLLPKSTS 107
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: A0A835Z285_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z285_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.160e-9 Identity = 44/115 (38.26%), Postives = 54/115 (46.96%), Query Frame = 1
Query: 85 EEEPCAFAKLWGQLDGKPFHCYMMSLPTILGRGSTATEGSRKPAGFIDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFLLPE 429
E EP A+AKLWG+ + + Y+ +LP +GR ST K GFIDLG L+ + G + G A E L SR IKLGP LMYFLLPE
Sbjct: 4 ESEPWAYAKLWGKHNDREIAAYVTALPAKIGRASTNQTPQEK--GFIDLGSDAKLALQ--------------------GGQLSAGMATA----ELLSSRMAIKLGPCLMYFLLPE 92
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: M7XJ19_RHOT1 (Forkhead box protein J2/J3 n=2 Tax=Rhodosporidium toruloides TaxID=5286 RepID=M7XJ19_RHOT1) HSP 1 Score: 56.2 bits (134), Expect = 7.900e-6 Identity = 31/98 (31.63%), Postives = 53/98 (54.08%), Query Frame = 1
Query: 169 ILGRGSTATEGSRKPAG------------FIDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFLLP 426
+ ++A+E SR P+ +DLG +A+SR+HA + + A + I L +NG+VV G+++AKG L RT I++ + +F+LP
Sbjct: 340 VAAASTSASENSRTPSAPSTPHPDSSTFTDVDLGPLRAVSRQHARLYYDFDAGAWVIEVLGRNGVVVEGRWRAKGQKVVLTKRTRIQIAERIFHFVLP 437
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: A0A194S2Z0_RHOGW (Uncharacterized protein n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A194S2Z0_RHOGW) HSP 1 Score: 55.8 bits (133), Expect = 1.080e-5 Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 211 PAGFIDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFLLP 426
P +DLG +A+SR+HA +++ + I L +NG+VV GK++AKG L +T I++ + +F+LP
Sbjct: 419 PLTDVDLGPLRAVSRQHARLSFDYDVGAWVIEVLGRNGVVVEGKWRAKGQKAVLTKKTKIQIAERIFHFVLP 490
BLAST of mRNA_D-herbacea_F_contig100.244.1 vs. uniprot
Match: A0A511KHI3_RHOTO (Proteophosphoglycan ppg4 n=1 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A511KHI3_RHOTO) HSP 1 Score: 55.5 bits (132), Expect = 1.430e-5 Identity = 27/72 (37.50%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 211 PAGFIDLGKSKALSREHATITWVPRARTYHITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFLLP 426
P +DLG +A+SR+HA + + A + I L +NG+VV G ++AKG L RT I++ + +F+LP
Sbjct: 263 PVTDVDLGPLRAVSRQHARLYFDFDAGAWTIEVLGRNGVVVEGHWRAKGETVVLTKRTRIQIAERIFHFVLP 334
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 188.7 |
| Seed ortholog evalue | 2.5e-45 |
| Seed eggNOG ortholog | 2880.D7FHX7 |
| Preferred name | FOXK1 |
| KEGG ko | ko:K09404 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000981,GO:0002252,GO:0002376,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006950,GO:0006952,GO:0007154,GO:0007267,GO:0007275,GO:0007494,GO:0007495,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009889,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0030154,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0035295,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048518,GO:0048565,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051607,GO:0051704,GO:0051707,GO:0055123,GO:0060255,GO:0065007,GO:0080090,GO:0098542,GO:0098586,GO:0140110,GO:1903506,GO:2000112,GO:2001141 |
| EggNOG free text desc. | sequence-specific DNA binding |
| EggNOG OGs | COG5025@1,KOG2294@2759 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03000 |
| Exons | 4 |
| Model size | 585 |
| Cds size | 585 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927416.6995294-CDS-D-herbacea_F_contig100:748070..748332 | 1622927416.6995294-CDS-D-herbacea_F_contig100:748070..748332 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig100 748071..748332 + |
| 1690790159.590998-CDS-D-herbacea_F_contig100:748070..748332 | 1690790159.590998-CDS-D-herbacea_F_contig100:748070..748332 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig100 748071..748332 + |
| 1622927416.7113323-CDS-D-herbacea_F_contig100:753195..753297 | 1622927416.7113323-CDS-D-herbacea_F_contig100:753195..753297 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig100 753196..753297 + |
| 1690790159.6049678-CDS-D-herbacea_F_contig100:753195..753297 | 1690790159.6049678-CDS-D-herbacea_F_contig100:753195..753297 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig100 753196..753297 + |
| 1622927416.7219384-CDS-D-herbacea_F_contig100:755123..755254 | 1622927416.7219384-CDS-D-herbacea_F_contig100:755123..755254 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig100 755124..755254 + |
| 1690790159.6128418-CDS-D-herbacea_F_contig100:755123..755254 | 1690790159.6128418-CDS-D-herbacea_F_contig100:755123..755254 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig100 755124..755254 + |
| 1622927416.8747172-CDS-D-herbacea_F_contig100:756013..756103 | 1622927416.8747172-CDS-D-herbacea_F_contig100:756013..756103 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig100 756014..756103 + |
| 1690790159.620755-CDS-D-herbacea_F_contig100:756013..756103 | 1690790159.620755-CDS-D-herbacea_F_contig100:756013..756103 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig100 756014..756103 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig100.244.1 >prot_D-herbacea_F_contig100.244.1 ID=prot_D-herbacea_F_contig100.244.1|Name=mRNA_D-herbacea_F_contig100.244.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=195bp
GKLCIYRECTPNTTSHKGREAEMVVQHNEEEPCAFAKLWGQLDGKPFHCY MMSLPTILGRGSTATEGSRKPAGFIDLGKSKALSREHATITWVPRARTYH ITCLSKNGMVVNGKYKAKGGVEALKSRTPIKLGPALMYFLLPEKRSNGRN DSRGAGAASTSTANEQMKAPSASRPPSQSQKTSPNAAPNAAATAA back to topmRNA from alignment at D-herbacea_F_contig100:748071..756103+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig100.244.1 ID=mRNA_D-herbacea_F_contig100.244.1|Name=mRNA_D-herbacea_F_contig100.244.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8033bp|location=Sequence derived from alignment at D-herbacea_F_contig100:748071..756103+ (Desmarestia herbacea DmunF female) GGGAAACTTTGTATTTACCGAGAGTGCACTCCTAACACTACATCGCACAA
AGGTCGAGAAGCAGAGATGGTCGTGCAACATAACGAGGAAGAGCCGTGCG
CATTCGCGAAGCTATGGGGCCAACTGGACGGAAAGCCGTTCCACTGCTAC
ATGATGTCTTTACCGACCATTCTCGGACGTGGCTCCACGGCGACAGAGGG
GTCGCGCAAGCCTGCAGGATTCATCGACCTGGGCAAATCGAAGGCTCTCT
CCAGAGAACATGGTGAGCTCACAGATGTTTACGTTAGCGCTTGGAATGGT
AAACATGTTGTAGCTGCTTTAGCCCCGCGTTATTTTTGGTGCTGGAGGGG
GAAAAGCTACATTGGTTACATGGCATTTCACTTTTTGGTTGAGCTGTTCG
GGGAGTGGCGTTTGTATGGATGGGTGTATGGCTACACAGCAAACGCAGGC
AGCAGGAGTACACAGACAGAGTATGATCCGTCATATCCATTGTGCGTGTC
TGAAGAGCACGGGTACAACAGACAGTAGCACAACTACTGTATTCAGTGAG
GGCTTGACAACAGTAGTACAACTGTCGGTACTATTCGCTGTTGGCAGTCA
CAGCACTAACTATACGACGGCGGACGGGACTGTACTGTTGTAGGTTGGAC
TTATGAGCACCTTTGGACAGGCAGTCGCAAAGATAAAAATAAAATCAGAC
CTCTGTTTTGAGAGGCAGATACCCCATATACAGCAGACACAAAAGGCTAG
CCAGAAGTACTTTTTCGTGTAAAAAATGTACTGACCCTGCTCACGGACAA
GCGGTTGGTTGTGGCGAAGATCTCCAGCACGTAAACACAAGGGGAGGTTA
TATTTTGGCACACAACAGTAGGAGTCTCACACTGCAGAGAACGTTGACGC
AAGAGGCATATTCCATGATTCCGAGTACAGTACTATTAATTCTATACTAC
TGTCTGTGCTGCCAGCAGCTGGCACCAGGTATCATACCAGTTGTAAGGCG
ACTGCTTATGGGAAACTAGTCTTGACAAAGATCTTGAGATTTATTTCACA
ACCGAAGATCAACATTTACATGTCAAGATTTTAATTATTTGTCTCCCAAA
GACATCAGCCGTGACGTTCCAAACTGGTTCGGGGGCCAGGGGATAATCGT
CAACACAACGCTATGGGATAAAAATCTTGGACTCTAGAATAGAGTTTTTT
TTTTTTTTTTTCCGTCACATTTATTATCTTCGCCCGATTCTTTCTCTAGC
TCCATCTCTCTTCGTAACTCAGATCCGAGGTCACATAGCAGGCGCTCCTC
CTGCCTTCCCACTGCGGTACGTGCCTACATTTTTGTCGCGAGAAGAGTGC
AGCACTTTCTTCCCTTGTCGACTTTCATCGAATTGTGCTTACTCACGCTC
TTCTCGCGTTTTCCGCGACGGAAGATGGCGCAGAAAAGTGTCACCGGGGA
TCGAACCCCCAACTTCCGCCGACAGAGACGAACACCCTGACCACTAGACT
ACTGCGCCACCCCTGAGTGGACCTGGAAAAAAATGTGCTGTTGGATGTAC
TAAAATTAGTGTGGAGCCTGTCCTCGTGATGATGAGGTGCTATTATACTA
CCATTGTATAGAAAAATAGAAACAGCAAACATTTCTGTGCACGTGCGCAA
CAGGGGGTCGTCCGACACGCTACACACTGCTGCTGCAACTACTATATTCA
TACTACTGTTGTAGAGAGCTAACGAGCTCACAACATACACGCCGCTACAC
GTGCCTTCAGCGGGAGGCGGATGCGGCATTGCAGTGTGCGACGTCCCAGG
TACCACCGCCTTGCCATGTCGATCAACGAGACACAAAAATCGCAACGGAC
ACGAAAAACATCGTCCCCCTACGTGTAGCTCTTTGCCTTCGTTGCAGTCG
GGATCAAGCATTCGATTTTTCTAGCACCACTCCCCGCGCGTGGGTAACTG
GGTCGAGTCGTGGGTAGCACGGGAGGGCCGCTTCGCTTGACTTGAGTCAT
CACCATCTGCAGTTGTCATAAACTTGTCATCGAGTTTATTGACAACAGCA
GAACTCAAGTCAAGCTGCAAAACGACCCGCGTGTCCAAGACAAGACCCGA
TTGAGACAGCTCCCGCATGGGGAGTGCATGGTGCTACAGTAGAAAAATTG
AATGCTTGACCCCACTGCAAGGATGCCAAAGAGTTCACGGGGCCCTTTCG
TGTCCCTTGCAAGCTTTGTACCTGGCTGATCCACATGGTGAGGCATTGGC
CCACGACGGCGGTAACCCAAAACGTCGCACACCGCAATGCCGCGCTTTCC
GCTGAAGGTACGTGCAGCTCTCGTACGGTGCGAGCTTGGTCGAACACGTC
GGCCAGGCCCTGCCTCATGATCTATCTACTGATAGGTCAGGGTGGCAGCT
GCCACGGTGGTCATGGGTGCCGCGGCCGAGGTACAATCGTCTCCACGCCT
GATGTCCTGTTCGTTGTAAATCCGCGTTACTACTACAGTCAGTAGTTGTA
CTACTTGTACTATCATACTACTGTCTGTACTGTTGTAGTATACAAATTTG
TCCGCCAAGGAGATTTCGATGGACATTTTGTTTTCGAAATCTCAGCCCAA
GATTTCCCAAATATAGCAACATTTCGGCCATCTCACAATCTCGACGGAGA
TTTCAGGGAAGATTTGCTCCTACGAATATAGCGAGTGTACAAAAATCTCA
TTCTTGGAAATCTTGGCTGAGATCAAGATTTTTGTCAACCTTAGTTTCCC
ATAAGCAGTGGCCTAAGGTTTGCGGCATTTATTAGGGAGTTTGCGCACAC
CATTTAGTGATATAACGACCAGTTTTATTGTTTCACTCCCCCGTTACCGA
CCGCTACCCAAATGCGGTTAGCAAATTTACCCAAAATATGCGTAAGTTAA
GGAAATTTGCTAGGATTTTTTTTTAGAGCCAGAAAATATTTGTTAAGAGT
AAGATTCCTAGGTTCCGCCGTTGGTAGGGTATGAACCTACACCTCTTGCG
ATAGCAAGTGCTCTTCCTTGAGCTACAACGACCTCGGTAGTGACAAGCCG
AGAGGAAATAGTTTAGACAGACAGGAGCCAGACAAGGCAAAGAGAACCAG
AGTGCGAGTGGGGGCGAGCATCTCGCTGTGTTCCTCTAGCAAGCTGCTGA
GGAGAATGCGCCGGTTAATGTCCCGCGCAATAGCCCTGCATGCTCCTCTA
GCAAACTGCGGAGAAGAATCCACCGGGTAATGTCCCATTACATTAACCCG
GTGGGACTTGTGGGTATGACTATCTCCCGCGACGCCCCAGGGATAACCTT
CTTGAGAAGTGCTGGGGTTTCGACTATAACATAATGCGTGTTCGTACCGG
GGACATGGTATCCACATCACGCCCCAGTTTTGGTGGTGATAGAGCTCGCA
CTCCACCAAACCTCAAAAGTAACGGAACCAGAGACAAGCGTCACAACATG
TTTTAGTCGATACAAAATATTGTACAAATCAAGTGGCGAATCGCTCAACG
CTTGGATTGTTGGTCACATAAGACAAAATTCTGTTTTGCCGGACAAAATT
TAGCAAACAGAACAGCAGGTTAAGACAAGTATACTGCTGTAGTACCGTAG
GCATATGGTTAACGAAATATTTTTAATACATATTCGTTCAGGATCGGACA
CAATAGTGAGCGATAACAATAGCGTAATCCAAACGCAGACGACATGATAA
GCACATATCGCGGACATTGCGGCTGGCCAGCTGGAATTACGACAGACATT
AAATAATGATCCTGGACAATGGCGTGCAGGAGCAACGACAGACAGTATGA
TTTTCCCGGGAAATGACAATAATTAGCAAACATTAGACGCTAATCTCGCA
CGCGACACGGCTGAGTGTGTACTCGTCGTGTGGACATCTGATAAGGCTCG
ACAAAACATCAAGGTTCATGCATGTATGCTCAGAGGCTTACAAATGACGT
TGACTGAGACAGACAATGTATCTATGTAATACTGTGACATGGAATGGCTG
GTTATACGGTGACAAGATGAAGACAAGCCATTTACAGTATACAATTTTGT
GGTGGGTCGCCTTCCGATGGGAAAAAAATATTTGCAAAAAAAAACATATG
GGATGACAAGCGACGGGTTGACTGACATTTTTCGCGCAGGCGGGCATTCA
CAAGCCTCGAAATGCGTCGAAATGTTAACGTTTAGTGGATGACAAAGACA
AATGTTCCACAACAAGTAAGACTCATAATAATGTATGCCGAATCCATTAT
CTGTATTGAGACAGATTGTAAATGGAATAAAGACACACGATAAAGACAAA
AAAATGTTGTGCGCGAACGCTTGGGTATATTCTCCCGTTTATCCGCTGGT
GTGCGACGGTGCCGACTAAAATAATTACAGTAGTACTGACAGACAAGTGC
CCGACATCTAATGCAAGAAAAACGAACGAACAAGAACATAAAAACACCAC
AACACCAAAGGTTTCGACACTGGGCACTGCGAATATGGCGAAAAACGAAC
TCGCGACAATACTCGCGATGAAAGAATGCCGAAAACGCAAACAAGTTGGC
ACGCACACTAAAACACATACTCCTTTGACAACCATGGACCTGATGGTCAC
CCCCCCTGGAAACGAGTTGAACCGGTGGCTGCAGAAGCGGGCCCATTGCG
CTAGGAACACTAGCACTAATGGTAACTCAGTTGCGGTGTCGGATGACAAC
ATGACTTACTGGTTCGGGGGCCAGGGGATAATCGTCATTATATTATACGA
GCTTCGCCTACCATTTTAGGGATGTCATCAGCATGTCTCCTATATGGGCG
CTTGGGTTTCGTCTCGCCTGTAATAATATTGAAAGCACGTTTTACCTTCT
TCCGGGTACACGTATTTTTCCTTGCTCTTTTAGCACGATCTTTACGCCCT
AACCGACACTTTGCCTTGCGGGTTTTCCTTCACGCCCTTGGCATGCGCCC
TTAAATCCTGCGAGCCTCTCGGGCGGATCACTGCCCGGCAGGCGCCCTTG
TACAGTAATACGATACCACAGTAGTAGTACTACTGACTGACGCGCTTTGC
ATGATACTATTGTAATGTTTTGCTGTTGTGTGTTTTTCTGTTGCCAATTG
CTTTGCTCTGGCGTGAATAAAACAGCTACGATTACCTGGGTCCCGAGGGC
GAGGACGTACCACATCACCTGTCTCAGCAAGAACGGCATGGTGGTCAACG
GGAAGTACAAGGCCAAGGGCGGTGTCGGTGAGAGTTTCGGGTGGGGTTTA
TCGGGCAAAAACACGGGCAAAAAACACGGGCAAAGGTGCACTCGCGACAC
GTTTTTTTGTTTTCTTGTTTTGTTGCTGAGGACACTTTACTAGGGCTGGC
TGTATCGATGCCAATATACAACGATGTATCGTCCGATGCGATATGGCGTG
TCTATCGATTGACAGCTTCACCGATATATCGGCCTTTTTGTCCAGTTCCA
GCTCTGTCGGGCTGTCCAGGGGTCGCTGTTAACCAACGTCAAGGCAATCT
GCAGCCAACTAGCGATTATTGCGGGAAAGCTTCTCTCTCAGCTTGTAGAT
TACTGCTGTAAGTACCGTACCACCTGTAGATGTTGACAACATACCGATTC
CCTAGTCCCTAGTCAAGGCGTGTATGATGTGTGGTGTTTTATGTTTGCAA
GCTTTTTTTTCTTTTGCTGGTATATATTGCTTGGTGGTAGGAGGGACGGG
TGCCTGTGTTGTGCCGTGGTATGTACCATTGTCACTATTGTCTAAGGGGA
GGTTGGGTTCTTGCGTTTGCTTGTACAAGGCTGTGCGTGGCGTAGCATGA
GACGGGTTTGTTCGTGTTATATCCTTTATTACGGTGCTCTGGATTGTTTT
TTCTGCTTGTTGTGGTGCCCTACATTTTCCCGGGGTCTTTCTTTGTTGTG
ACCACGGTTGGATTGGAGCCGAGTCATTATATGTTAAATGTGGGACTACC
AATTAAATCAGTCAAATTGTTTTGTGGTGGTTTCAAAAACAGGGATATAA
GCGATGTGTCTAATTTTTATGGCCGCTTTGCTAACATATTTGTAATCGAA
TTTTTGTGCCGATTCATGCTCCAGTGACACCCCTTTCCGGTAGTCATTTG
TGGCCCGATAATGAACAGAAATGAAGCCAATTGCCGTAGTTTTTCTTGCC
TCCGGCGGCGCCTCCAGCGGGGCCCCTCACTAGCCGGAGAGGCCGTGGCG
CCGCGGCCTCGCTTCGCTCGCCGATATCTGTTAGCCAATAGTACATGTAT
AGATCTATCGGCTGCGCAGATTTGCCGATATAAGTATATAATATCGGCAA
GAGCTATCGATACACAGCCCTACAGTTTGCCTCTGCTCTACAAGTCAGCG
CTGACTTGTTTGACAGGGGTATGCTGTCCTTAATCAACATGTTTTTATTT
AACCTACTGCTGCGACGGGGGGTGTTTTATGTGTTTATCATACTCGTATA
TGATAGGCGGAAATATACTGTGGTGGCCGAAAATGAGATGATACCGTTTG
TTAGGCAGGCGTTTTTTTTGGAAGAACCGAAGACCTGGATCGTCGTGGGA
AGAAGAGAGACTTTTGGGATGACAAACTCGCTCGTTACCGCACAAGCACA
AGCCGGACGTTTTTTTTTTTGTGACTGTTCCTTGTTATCGAAACATGTTG
GAGAGGGGCGTCTCTATTAATAGCGTAACGCATTTGGAGCAGAAGAAAAA
TAGTGCCCTTTCCTCTTTCCCTGGTATGTAACTTGTCAAATGATACTACT
GCTGACCACGATTTTATGCTTCGGGGAACCATTGCAATACACTACCGCGG
TACAGCAGTAGTACCGCTATAGACTGTACCGAGTATTTTTGTTTTCTAGC
GAGCGCGTGTTATCTTTTAGTCATGCGGACTACGAACAACCCCCTGGTCC
TGTACTACTTACTGTGTAGGGAAGTCCCGGGCTGTTGTTTTTTTTTGTTT
AATGACACCGTTATGTTGTGCCATTTGTGTTGTATGTACTGCTGTACTTA
CTCTACTGCCTTGGCGTTTTCTTGTCACCTCGTCTTTCCTCCTTCCTTTG
CAGAGGCGCTCAAATCGCGAACTCCGATCAAGCTGGGACCAGCGTTGATG
TACTTCCTTCTGCCCGAGAAACGCTCGAACGGTCGCAATGATTCCAGGGG
CGCAGGGGCGGCTTCGACGAGCACCGCCAACGAGGTAAGCGAGGTCCCTC
CGTCGCCGAACGGCTGTATTATTATTACGTATACCCATTCGAATACTTTT
GGTGCTACTATGTATACTACTGTATCAGTATATTAGCAGAGATGACGGCC
TTGCTCAGGCAGCCGAGCCCTTTGCGATGATGACCTTCTATCATATGAGC
TACTCGTAGCTGAGCTTGGAAGCTCACGTGATGGACTAAAAATAGTATTT
GTATTACAAGGTTGCCTTTTTCTGGCGGTGTTTTTATTTGGTGGGACCCG
AAAACACACACAAAAGAAAATTCGGGCACCCGGTGCAATGTGAAAGTCGC
CGTGCGCATTTTGTGCTTCAGGAGTCTGCCTCATGCTACGGTGTATAGAT
GCAGGAATGGGGGCGAGGCGAAGCAGGAAGAAGAATAGCGCTAACTTTTT
CTTCTTGTGTAGTATTATAGAGTTGTGATAAGTCAGGTACAGTAGTTCGT
CGATTGGGATGCATGGCTTTTAGCTGCATGCACTGCATTGCATGGCTGGT
TGTATGTGGAGCGTTTACGATACCCCCCCCCCCCCCGCGCGCCCTCTTTT
CCCCCAAAGTATGCGGAGTGTTTGCGACATACCATTCACCCCCTCTCCCG
TTTTTTCCCTACACCTCCTTGCTCCGTTTATTAAAAACATATATTTTTCT
TGCGTGTGTGTGGGTGCCCCCCCCCCACGCCCCCCCAACCGCCCGTCCTC
CTGGTTGGTGTTTTGGTTTGTGCGTGTTTTGTGCCGGCGTTAGCAAATGA
AGGCTCCTTCGGCATCACGACCGCCGTCGCAATCACAGAAGACGTCACCA
AACGCGGCACCAAATGCGGCGGCGACGGCGGCA back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig100:748071..756103+ >mRNA_D-herbacea_F_contig100.244.1 ID=mRNA_D-herbacea_F_contig100.244.1|Name=mRNA_D-herbacea_F_contig100.244.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1170bp|location=Sequence derived from alignment at D-herbacea_F_contig100:748071..756103+ (Desmarestia herbacea DmunF female) GGGAAACTTTGTATTTACCGAGAGTGCACTCCTAACACTACATCGCACAA AGGTCGAGAAGCAGAGATGGTCGTGCAACATAACGAGGAAGAGCCGTGCG CATTCGCGAAGCTATGGGGCCAACTGGACGGAAAGCCGTTCCACTGCTAC ATGATGTCTTTACCGACCATTCTCGGACGTGGCTCCACGGCGACAGAGGG GTCGCGCAAGCCTGCAGGATTCATCGACCTGGGCAAATCGAAGGCTCTCT CCAGAGAACATGGGGAAACTTTGTATTTACCGAGAGTGCACTCCTAACAC TACATCGCACAAAGGTCGAGAAGCAGAGATGGTCGTGCAACATAACGAGG AAGAGCCGTGCGCATTCGCGAAGCTATGGGGCCAACTGGACGGAAAGCCG TTCCACTGCTACATGATGTCTTTACCGACCATTCTCGGACGTGGCTCCAC GGCGACAGAGGGGTCGCGCAAGCCTGCAGGATTCATCGACCTGGGCAAAT CGAAGGCTCTCTCCAGAGAACATGCTACGATTACCTGGGTCCCGAGGGCG AGGACGTACCACATCACCTGTCTCAGCAAGAACGGCATGGTGGTCAACGG GAAGTACAAGGCCAAGGGCGGTGTCGCTACGATTACCTGGGTCCCGAGGG CGAGGACGTACCACATCACCTGTCTCAGCAAGAACGGCATGGTGGTCAAC GGGAAGTACAAGGCCAAGGGCGGTGTCGAGGCGCTCAAATCGCGAACTCC GATCAAGCTGGGACCAGCGTTGATGTACTTCCTTCTGCCCGAGAAACGCT CGAACGGTCGCAATGATTCCAGGGGCGCAGGGGCGGCTTCGACGAGCACC GCCAACGAGAGGCGCTCAAATCGCGAACTCCGATCAAGCTGGGACCAGCG TTGATGTACTTCCTTCTGCCCGAGAAACGCTCGAACGGTCGCAATGATTC CAGGGGCGCAGGGGCGGCTTCGACGAGCACCGCCAACGAGCAAATGAAGG CTCCTTCGGCATCACGACCGCCGTCGCAATCACAGAAGACGTCACCAAAC GCGGCACCAAATGCGGCGGCGACGGCGGCACAAATGAAGGCTCCTTCGGC ATCACGACCGCCGTCGCAATCACAGAAGACGTCACCAAACGCGGCACCAA ATGCGGCGGCGACGGCGGCA back to top
|