mRNA_D-herbacea_F_contig100.235.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig100.235.1
Unique NamemRNA_D-herbacea_F_contig100.235.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig100.235.1 vs. uniprot
Match: A0A6H5JTA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTA4_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.990e-30
Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 1 
Query:  343 QQLEEVRILRARGAELEERLAKARAGSSSARERREFMQEEVEQARDYGKSLHQDMLRLARIDEALSPDKRSSLEVLRRLVCTVTEVEVQEKTALEDGRAKEEALRAEITDFTGVTS 690
            Q+  EV  LR RGAELEERL  AR   +SARERREFM+EE EQARDYG  L Q+M RL RI   L PD+ +SLE LRRLV T+TE+E QE+ ALE G+A+E ALR EI +FTG T+
Sbjct:    4 QRQAEVLSLRERGAELEERLQAARIALTSARERREFMEEEAEQARDYGDKLAQEMARLGRITRTLPPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRTEIAEFTGETT 119
[Close]
BLAST of mRNA_D-herbacea_F_contig100.235.1 vs. uniprot
Match: D7G045_ECTSI (Similar to fidipidine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G045_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 9.010e-19
Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1 
Query:  451 MQEEVEQARDYGKSLHQDMLRLARIDEALSPDKRSSLEVLRRLVCTVTEVEVQEKTALEDGRAKEEALRAEITDFTGVTS 690
            M+EE EQARDYG  L Q+M RL RI   L+PD+ +SLE LRRLV T+TE+E QE+ ALE G+A+E ALRAEI +FTG T+
Sbjct:    1 MEEEAEQARDYGNKLAQEMARLGRITRTLAPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRAEIAEFTGETT 80
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTA4_9PHAE1.990e-3062.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G045_ECTSI9.010e-1962.50Similar to fidipidine n=1 Tax=Ectocarpus siliculos... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:614713..622569 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionsimilar to fidipidine
Ec32 orthologEc-12_007170.1
Exons3
Model size821
Cds size618
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.235.1prot_D-herbacea_F_contig100.235.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig100 614713..622368 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927416.0084817-CDS-D-herbacea_F_contig100:614712..6150601622927416.0084817-CDS-D-herbacea_F_contig100:614712..615060Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 614713..615060 -
1690790159.1035385-CDS-D-herbacea_F_contig100:614712..6150601690790159.1035385-CDS-D-herbacea_F_contig100:614712..615060Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 614713..615060 -
1622927416.0198843-CDS-D-herbacea_F_contig100:616572..6168061622927416.0198843-CDS-D-herbacea_F_contig100:616572..616806Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 616573..616806 -
1690790159.1122785-CDS-D-herbacea_F_contig100:616572..6168061690790159.1122785-CDS-D-herbacea_F_contig100:616572..616806Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 616573..616806 -
1622927416.032523-CDS-D-herbacea_F_contig100:622332..6223681622927416.032523-CDS-D-herbacea_F_contig100:622332..622368Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 622333..622368 -
1690790159.122207-CDS-D-herbacea_F_contig100:622332..6223681690790159.122207-CDS-D-herbacea_F_contig100:622332..622368Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 622333..622368 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927416.0457635-UTR-D-herbacea_F_contig100:622368..6225691622927416.0457635-UTR-D-herbacea_F_contig100:622368..622569Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 622369..622569 -
1690790159.1301208-UTR-D-herbacea_F_contig100:622368..6225691690790159.1301208-UTR-D-herbacea_F_contig100:622368..622569Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 622369..622569 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig100.235.1

>prot_D-herbacea_F_contig100.235.1 ID=prot_D-herbacea_F_contig100.235.1|Name=mRNA_D-herbacea_F_contig100.235.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=206bp
MAACNRQHSGVQMHEDMLLNAAKPEAMEKGKMAEEEEVRAGAGDDTNQQL
EEVRILRARGAELEERLAKARAGSSSARERREFMQEEVEQARDYGKSLHQ
DMLRLARIDEALSPDKRSSLEVLRRLVCTVTEVEVQEKTALEDGRAKEEA
LRAEITDFTGVTSLEDDSPEGQGADGEREDDDDCGDNAGVIGAGTTARDK
EEGAGG
back to top

mRNA from alignment at D-herbacea_F_contig100:614713..622569-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig100.235.1 ID=mRNA_D-herbacea_F_contig100.235.1|Name=mRNA_D-herbacea_F_contig100.235.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=7857bp|location=Sequence derived from alignment at D-herbacea_F_contig100:614713..622569- (Desmarestia herbacea DmunF female)
CGAGTAACCCTGTATGTGATTCTGGAGCCGAAGACGTTCGAAAACTCTTC
CAAGAAGTCTGATGGAAGAGAGCACCAAAGGTTGATTTAGGTTCACTGCA
CTGCACTCTTCTTCTTGTTGTGCACACAACAGTCAGTAGTAGTAGTAGCA
GCTATTGCGTCAGACCCCACACCTGGCAGCGTCACTATCAGAGATCACAT
CATGGCGGCGTGCAATCGGCAACACTCGGGAGTGCAGGTGTCAACTGTGA
AAAAGTTTCTGTAGCAAACCTACTGTCTTGGCGTGTGTGGTTTGAAGAGG
TTTATGGTGCATCACGAGTTTATCTGTTTATGAGAGTTTATAGTTTACAG
CGACCGTCAGTAGTAGTACCGTCGTACTTGTACTAAGTACAAGGGCGCCT
ATGAACTGCCCGGCAGACTCGCAGGATTTTAGGGCGCATGCCAAGGGTGT
GAAGGACAATCCGCAATTAATTCCGTACGTGTCGGTGGCGTGAAACATTG
TATACCTAAGAGTAAAGGAAAATAGGCGTAGGTAAAAAACGTGTTTTCAA
TATTAATTGGAGGCGAGACGAAACACAAGCAGAGACATACCGATGATGGT
ATCATCCCCAAAATGGTATTATAGGCGTTTCTACCTACTGTACGAGTACG
AGTCGTAGTCCTATCTACTGCGCCATGAGGGTAGGTATCCGATAGCCGAT
AGCCGAACAGCAGCAGGACTGCGCTATTTCGTTTTTTTATTTTTCGGTGT
TTTCATAGTAAATTTAGTGGGCCAACAGCCAACAGTCACTATACGAGTCA
CGAGGTTTGCCCGCTTTTTTTTTTGTCTCTCATACGAATGTAGGATTACA
CCATTACACCTGCTGTACGACTACTACTACTATTACTGCTACTACGCTAC
TGTTGTATCACAGCGCACCGCATCTATCTGACAGCGTCTCTCCTCTAGCT
AGCACTCCTTTAGTCAGTAATGAGCCAGCAGGCACTCTGCCCGTCACGCC
AGCCAGCCCCCTCTGCTTATACATCCACCCCGCCTTTAGTCTGCAACAAC
GCGTGTTGCCTTCATGGTCGTCTATAGCTAGCTGTTGTTGATGAAGCTGT
GCAATACGTATTATTCATTTCTGATGTATCTTGCCAGATTTATACTTTCC
TACGTGGTGAGCGTCCCCAATAACTGTCTCTCTCAATGGCCCTGCTCTCC
ACACGCCACGCCATCTATCTGTATCTGCTCTCCTGCCTCGGGTCAATGTA
AACAAACGTGCTGGACGATGATGAGTAGGAGGTATAGGAGCCTATATTAC
TACTGTTGTTGCAGAGCGTGCAAAAAACGGTCAAATACTCGAACTCTGGC
TCTTGTGGTGGACCATTCGGTATGTTTTTGCGTATCTTGGGACAGAAAGA
AGAGAAAACATCCGAATCTCCGCGGCTCTTCTCGGCGAGCATCGCGATGC
CACACCTCAATGCCGCCTGTGTCCATACGCGATATCGGTACACTCGCTAT
TAGTATAGAATCAGGATTCGGTGCCCTGTTAGCCATTTGGGACAACTGTA
TATAGGTGTATAATCAGTACTTGTACTTCGTATGAGATCATACTCGTACT
CGGAGTAAGTCTCACGACAACAACAGCAGGAGTATTATACGAGTAGTGCG
TCAGTACTCATAGTCAGTAGCCCTACAAGTACAACAGTTACAGTACAGTA
CCAGTAAAACGAAAAAGGCCGGCAAAAAAGATGCCTCGCTTCGCTCGGCA
TTTTTCGCCTCATCACCATTGTTTAGTTCTATTATATGCCTCATATGGAG
CAATGGTCTATTAATAATGGTTAGGGTGTTCGCCTCTGTTGGCGAAAGTT
CGGGGTTCGATTCCCGGTGGCACTTTTCTGTGCCATCTTCCGTGGCGGAA
AACGCGAGAGCAAGAGTAAGCACAATTCGATGAAAGTCGACGAGGGAAGA
AAGTGCTGCACGCTTCTCGCGATAAAAATATAGGCACGTACCGTAGTGGG
AAGGCGGGAGGAACGCCTACTATGCGACCCCGGATCTGAGTTACGAAGAG
AGAAGGAGCTAGAGAAAGAATAGAGCTAAGGTACTAAATGGGACGGAAAA
TACTGTGCTTCGTATATATATATATGTCCCCCAGTCCAGCTCGCAGGAGC
TCTTCTACTCATCGCTTAGCGCGCCTCACCTGTGTTGCACTGCATTTATT
TTATTTATTTATTTCCGTCACATTAGCCTGATCGCGCGGACCCGTGGTCA
CAAAGGTAGGCACCTTATTTTACGCAATAAAACCGAATAAAACCGACCCC
TCCAGCTCCTCTCCAAAAAACTCAATCTACCCCCACTGACTTCATGTCAT
CCACGACTTGGGAGATAACGTTGGCTAAGATAACAGGGAGACACAAAAAA
CTAAAATAAAAGAGTAAAACGAACGAAAACAAAACACAGAGCACAAACAA
AACTAAGACACTGGACAGGTGCTACGGATTTCAATCCAGCCCCCCCCACC
ACATACAAAATGTTTTATGGATGTCCTCAAAATCGAAGGCGTTTCGGATT
CAGCGGGGTTTCTTGAAATCTGTCCCCTGATGAACGAATTTGAGCAATAT
TTTGCTGGCACCGTTCTCCCTACTCAATCATCGGAGTGCCACAGCACGGA
GTCCCGAACCCAATTACTTACTCGCTGCAGCCTGTGCCGAAGCTAGATTG
GCGATTGGATTCCTAGATTTGGAGAATTCCGGCCGACCACAGCTGAAAGC
AAATTCGTAGCTGCACTGTAGACAGTTGCGTCGCCTGATTAGACAATTTT
CACGGCAGAAGTCGTCCTCGAAATCAAGGGCAAAATCACCCAGGACTCCT
GCCGTGTCGTCTGACACAGGCAAGGAAGGTTTTCAAGCTTGGTGAGATTT
TGGATCAGCATCACAGCTGCCACAATCGGCCTGAGTAGAGTGCCTCAAAA
ATCAGCAAATTATGTACGAAACCGTCCTTATATATCATACTTCGTATGGA
TTATACGCAAGAGACAGTACAACAACAAACAATACAGTGTGGGCTACGAG
TATGGTTTAAGAGAGGTGTGTGCCAGGCGAAGTGAAACTCTCTTAAACCG
CAGCCCCTCAAAAATTTGTAGTACAATGCGGCGCAATTCAATGATCTGGA
ACCACATTTCAAACTTGAGCGACAAAGTCCTCCTCGATAGAGGGCACCAA
AGAGTCCATTGCAGGGTGGTGAGATTTTGGATCAGCCCTACAGCTGGAGT
TGTGGCAGAATTACTGAAAATCCTATAGGAAAACTACAGTAGTAGAGGTG
CTTCCAGGTGTAGATTTGATTGTATATTTGGCAAAAAAAAAGTTTTTTTG
TTGTGTGGTGCAACACAGGTGGCCTGTCAAAATAAACCGTGGTCATAGGT
GCGCCCCCCCGCCCCCCCCGTCCCCGGTACATGCAAATGCTTTATTTTAT
TGTTTTTATTACAAAGACATCAGCCGTGACGTTCCGAACCGGTTCGCTGT
CCAGGGGATAGTCGTCAACTTCTCTGTGTAGTACTTCGATCGCGCACATT
CTATCGTTCCTCAAATAAAAGGCATAGCGCAGTAGCTCCCCTGGGTGCAT
CCAGGCCCAACAAGATAATAATTACAGCATGAGGATAATTTAGGTCCCCC
TATCATCTTGTCACTACCTGGTAGACTAGCCTTTCAGAGGAGGACCTGTA
TCAATTTAAGTTTGTTTTTTTCTTTGTTCCCCGTCCCATTTAATATCTTC
GCCCTACTAGTACGAGTATACTTTCTCTAGCTCCATGTCCCTTCGTAACT
CAGATCCTGGGTCACATAGTAGGCGCTCCTCCCGCCTTCCCACTATGGCA
CGTGCCTACATTTTTATTGCAAGAAGAAGAGCGCAGCACTTTCTTCCCTC
GCCGACTTTCATCGAATTGTGGTTACTCGCGCTCTCGCGTTTTCCGCAAC
GGAAGATGGCACAGAAAAGTGCCTTTTTGTTTTTTCCGGGAATCGAACCC
CGAACTTCCGCCAACAGAGGTGAACACCTAGTATCATAAACCGTAGCGCC
ACCCCTGTCCTATGCGATGTTTGTATCGCGCACAACAACAGTGTTCAGCG
CTCCCATGCAGCTCGTCGAATTTTATCGATTTTGCTCAGAAACGTTCCAT
TTTGTTTTCACCGGGAACAATCGAACCCCGACCTTCCCCCAGTAGGGGTG
ACAACCTACATACTCGATTCTTGTCTTGCTACAAAAACCATCGCACTGAT
GTTGTTAGCTTTAGCAACCCAAGTAGTTACGTAGACGTAGCGCTGAACCG
ACAAAATACTGTACTAGTACTTGTAGTAGTGCTGTCCGCGCTGTTCAGTG
CTGTTGGTCTGCGTGATACTTGAAACCCATGGTCTATCGATAAAGCTTAT
TGTGGAGTACCGCCCGCCACCCGTTGCCTTCATGTGTTGGTAGAGGGTGG
AGGGGGAACTCTATTGGCAAAGCACGTCATATTTGTTTCTTGAACGTCGA
CCGACAGGTTGTGTATACGAGTAGCACGTGGCGACTGCCATTACTCTCTT
GAAACAGGGTGACTATTTATCGTCGGGTACGGCTGCTCTCCTCGCCCCCA
ACCAGCGCAACCCCACGCGTATGAGACGGAGGCAACAAGAAATACGGAGA
AATCCTATCTTGTGCGTATCATGTTACCCCCCCCTCCCCCCGAAAGATGG
AGGAAATTAAGAAAACTGAAAAAATGAATGTTGGCACATTGACCCCGTAT
GACACGAGAACTGCATTGCAGGCACAATTTTCAATTTTTGCGTTACATCC
GGGCGGGAAACATATCGCGACCAACTAGAAATTCACACTGTCGCGCTCGT
TTTTGTGCACCTTTTATTTATTTATTACAGAATACATAAGCTATTAGTCT
ATAGGGTTCTCTACAATGGAGCCAACTATTGCACAAAGCCAGGCGGTATC
TGTAAGCTCCTTCTGGGCGGGTGATTGTGTACGCTGTTGCTGAAACTATT
CTGCAGCTTCTTGTGCTCCCGCAGTTTCCCCACGACACCCCCGCAATATT
GTCACGTGGGGGGCTGTGTCCAACGCCCTACGAGTATAATTTTCAGGACA
GCGTGCGTGTGTGCATCTTCGCAGTGTCTATGGTGCCATCGCTTGAACCA
CGTCCACTGCGAGTCGAAAGAAAACCTAAATCGTGTATGATACGGAGTCT
AACTTATTTATTGAAGGAACAAAACACCAGCCGGGACGTCTCTTTATAAT
CCGCATTTCTAAGGACAATGGGATAATAAGTAGATAATAAGTCATACGCG
CCCGTACCCCATACCCTCTTGTGGTGACAACGATGACGTAGTACTTCGAA
ATGGACCTTCTTGTTTTTTCTGCATTTTGCGTCCGGCGTAGGGCTTCTTG
CCGGCCATCTGCCTCCGCAGTGAGTACTCGTAGGTCATCGTCAATAGTAG
TCAGTCACAAGATGGTCTGTGATGCGCTACAGCAGTCAGCACAACAGTAG
TAGGGCTTGGCAATATCAACCAGCAGTAGGGGCAGCGGCAGAGATGATGA
GCAAAACTGACAAAGTGCTGTTATTTGAAAAGCGTACCTGTTGAGTATCG
GATCGGATCGGATCGTATGAAGCAGTGGAGCGCAATGGTTTGTCTGCTTG
TTCAAAACGACTAATAAATAGTCTCCTTTGTGAACCGCAAAAATAATCCG
CAGCATGTATTTGAATGCGGATGGATGTGCGCGTCGGTGTTTTTCTATTT
GACGTCGTTGCAGATGCACGAAGACATGCTGCTAAACGCTGCAAAACCCG
AGGCAATGGAGAAGGGGAAAATGGCAGAGGAGGAAGAGGTAAGGGCAGGG
GCTGGTGATGACACGAATCAGCAGCTTGAAGAGGTGCGGATCCTTCGAGC
AAGGGGCGCAGAGCTGGAAGAACGCCTGGCCAAGGCACGAGCCGGCTCGT
CGTCGGCCCGAGAACGTCGAGAGTTCATGCAAGAGGAGGTTGAACAGGTG
CCTTTCAAGTTTTTTTGTTTTTTGTTTTTCTCTGTGTTCTGTTTTGGATG
GAAGACGACTTCACACTTTGGCTTTATGGCCTGGTGTGTACCCACCAACT
CACCCACGGATGAATGCAAGGTACAGCACTACGAGTACTGTTGTACCGGG
GAAATATGGCGGACAACACAAGCACGACAGTCTAGTACTTGAGAATAGGT
AAGCTGTATTGGGATAAAATGGGATACTTTGATGTGCACGATACATTTAG
ACACGAATGCGTTTTTTGGTCTAAGTGGTGTTCGATGAGACTCTTGGTGG
CTTGCCGTGACGGTCAGCACTACGTCATTTTATCATTTTGATGTAACGCT
ACAAAAAAGCAAGGAGCGCTTGTCGCGGACGGACGCCAACGAGGACACTA
CTAATAGGTCCACAATATGGGTGTTAATACGAGTTCCTTAGGCAGGTCAC
CGTTTCTTTGTTCGGGTGCTTGTCATGTTTTTGTAGGTCCTCGAGGGCGA
CCAAAGTATATCGGTCCTTGTTTTTTATGCTGGAAGCTCTCTTGACTGTC
TTCGCAGGGGGAACGTCACACACGACACCGGAAAATGTTATCTCCCACAT
GTACATATTGTACATATTGGACCCAACACGATCACAGTACGCACCGTTTC
GAAAAAGCACAAACATGCTACATGTCTCTTATGCGTGGACCATGACGTGT
TCGAGTTACCCTCCCCCTCCCATTGTCAAATGACTAAGGTAAGCAACAAA
TTAGTACGCCCGTACCCCCCCCCCCGTTCCCCGCCAAGGAAGATCCCAAT
ACGTGTATGTTGTTCTTGAACCTTCGTGACTGAAAACTATAGTTCCGCTT
TTCCTCGTGGATGTGAGAAAATGCAGAACAGGATAAGCTTTCCCAGAAAA
ATAAAAACTGGCGGATTTGTTTTGGGAATCTCTACTCGTATCCGCCGATA
TGCGCCGATTTAGTATGCACCACGAAACATAATGTTTGGTCTTGGGCATG
ATGCGAAGGGACGGGGAGGGGTATTTTCACCGGGAACTGCCCAGGGATTT
TTGTTTGATTTTCAGTCAATTGTATCTTGAACAAGTAAGAAATATGATGC
AATCGAAGAGACGACGAATGTACGGTACTGCTATCTGTTGCTGTGCGTCG
ATTGACGGGAACCTAAAAAAATAAAGGAAAAAAAAGGTAGCCTGGGACTA
AGCGGATGGCCGGATAGTTCGCCCCCGCTACCCCCGCCGCCGCCGCTGCC
GTCGTACGAACGTGTGCGCAGAGAACAACAGTTTCGGTGGTAGACCCGGC
CGGTTGTACTATTTTGCTGTACAACAAGGACGTTCGCTGGCTGTACGGTA
GAGCGTCCAGCCGCGCCGCAACTCACGGCGTCACACGCCCGTATCATACA
CCCCGCACACACGCACCCCGCACACATACAGGCACAGCCATCCCCTTGTT
GTGTAACACGCCACTGATACAAGCACCATGTCCGGACATAAAACTTGCGC
GATACGCAGGCAAGAGATTACGGCAAATCGCTACACCAAGACATGTTGCG
CCTCGCTCGCATCGACGAAGCCCTGTCCCCGGATAAGAGGTCCTCCCTCG
AGGTGCTCCGACGGCTCGTGTGTACCGTGACCGAGGTAGAGGTCCAAGAG
AAGACGGCGCTCGAGGACGGGCGGGCCAAGGAAGAAGCCCTCCGAGCAGA
AATCACGGACTTTACTGGGGTGACAAGCTTGGAAGATGATAGCCCGGAGG
GGCAGGGTGCCGATGGAGAGAGAGAAGACGACGACGACTGTGGGGACAAT
GCGGGCGTCATTGGCGCGGGGACGACAGCGCGGGACAAGGAAGAGGGTGC
CGGTGGC
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig100:614713..622569-

>mRNA_D-herbacea_F_contig100.235.1 ID=mRNA_D-herbacea_F_contig100.235.1|Name=mRNA_D-herbacea_F_contig100.235.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1236bp|location=Sequence derived from alignment at D-herbacea_F_contig100:614713..622569- (Desmarestia herbacea DmunF female)
ATGGCGGCGTGCAATCGGCAACACTCGGGAGTGCAGATGGCGGCGTGCAA
TCGGCAACACTCGGGAGTGCAGATGCACGAAGACATGCTGCTAAACGCTG
CAAAACCCGAGGCAATGGAGAAGGGGAAAATGGCAGAGGAGGAAGAGGTA
AGGGCAGGGGCTGGTGATGACACGAATCAGCAGCTTGAAGAGGTGCGGAT
CCTTCGAGCAAGGGGCGCAGAGCTGGAAGAACGCCTGGCCAAGGCACGAG
CCGGCTCGTCGTCGGCCCGAGAACGTCGAGAGTTCATGCAAGAGGAGGTT
GAACAGATGCACGAAGACATGCTGCTAAACGCTGCAAAACCCGAGGCAAT
GGAGAAGGGGAAAATGGCAGAGGAGGAAGAGGTAAGGGCAGGGGCTGGTG
ATGACACGAATCAGCAGCTTGAAGAGGTGCGGATCCTTCGAGCAAGGGGC
GCAGAGCTGGAAGAACGCCTGGCCAAGGCACGAGCCGGCTCGTCGTCGGC
CCGAGAACGTCGAGAGTTCATGCAAGAGGAGGTTGAACAGGCAAGAGATT
ACGGCAAATCGCTACACCAAGACATGTTGCGCCTCGCTCGCATCGACGAA
GCCCTGTCCCCGGATAAGAGGTCCTCCCTCGAGGTGCTCCGACGGCTCGT
GTGTACCGTGACCGAGGTAGAGGTCCAAGAGAAGACGGCGCTCGAGGACG
GGCGGGCCAAGGAAGAAGCCCTCCGAGCAGAAATCACGGACTTTACTGGG
GTGACAAGCTTGGAAGATGATAGCCCGGAGGGGCAGGGTGCCGATGGAGA
GAGAGAAGACGACGACGACTGTGGGGACAATGCGGGCGTCATTGGCGCGG
GGACGACAGCGCGGGACAAGGAAGAGGGTGCCGGTGGCGCAAGAGATTAC
GGCAAATCGCTACACCAAGACATGTTGCGCCTCGCTCGCATCGACGAAGC
CCTGTCCCCGGATAAGAGGTCCTCCCTCGAGGTGCTCCGACGGCTCGTGT
GTACCGTGACCGAGGTAGAGGTCCAAGAGAAGACGGCGCTCGAGGACGGG
CGGGCCAAGGAAGAAGCCCTCCGAGCAGAAATCACGGACTTTACTGGGGT
GACAAGCTTGGAAGATGATAGCCCGGAGGGGCAGGGTGCCGATGGAGAGA
GAGAAGACGACGACGACTGTGGGGACAATGCGGGCGTCATTGGCGCGGGG
ACGACAGCGCGGGACAAGGAAGAGGGTGCCGGTGGC
back to top