mRNA_D-herbacea_F_contig100.231.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A6H5JZG8_9PHAE (Hflx-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZG8_9PHAE) HSP 1 Score: 468 bits (1203), Expect = 4.720e-159 Identity = 292/467 (62.53%), Postives = 336/467 (71.95%), Query Frame = 1
Query: 1 QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQAR--QLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPTLEVWNKVDKEVVVAVQSDGDNIS------------------SSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKVDRLLHLGGGS-------RFASKPLDRYRYVRVLPGQTQQ 1320
+VV LR+VHPKF+FGSGK +EMSG +SA +ADTVFVNAPLSG QQK L+ +W GATVLDRF VILDIFA+RARTTEAKLQAR +LA LKY+AAHLV KG SG+DRQ GG+G +GGSGEKA++ QR+LLR+RTAEV+RQLKDVERRRGFQR +R+RRLE +VALVGYTNVGKSSL+NQL L H G GG G G+G E G G XXXXXXXX MV ARNRVFDTLDPTVRSVTLPSR RCVLVDTVGFIQDLPTDLVHSF++TLEEV+ ADVLLHVRDASVE RV E+ R AV+ETLAELGA PTLEVWNKVDKE V ++ G S E A++ + G A GG TGP + AIRVSA +G+GL LLE++D +LHL GG+ RF+ KP+DRY YVRVLPGQ+QQ
Sbjct: 50 EVVQLRNVHPKFVFGSGKTSEMSGAISAADADTVFVNAPLSGQQQKALSAEWGGATVLDRFAVILDIFADRARTTEAKLQARVVELAMLKYKAAHLV------KGSGSGFDRQGGGIGTMGGSGEKAIDTQRQLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHNTRGVGGGG--GNREGKGSERGRRFDGAXXXXXXXX--MVQARNRVFDTLDPTVRSVTLPSRVRCVLVDTVGFIQDLPTDLVHSFKSTLEEVKSADVLLHVRDASVEPRVGEAHRKAVQETLAELGAGGRPTLEVWNKVDKERRVDPENRGAXXXXXXXXXXXXXXXXXXXDMSLPDEAKAEKANGRMEGPAGEGGSRLSHAGEG------RTGPDDEGAIRVSAASGQGLAHLLERIDAMLHLNGGADGEGSGRRFSIKPIDRYEYVRVLPGQSQQ 500
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: UPI00056245B2 (GTPase HflX n=1 Tax=Sphingomonas jaspsi TaxID=392409 RepID=UPI00056245B2) HSP 1 Score: 219 bits (558), Expect = 3.670e-63 Identity = 155/424 (36.56%), Postives = 217/424 (51.18%), Query Frame = 1
Query: 13 LRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDV---PTLEVWNKVDKEVVVAVQSDGDNISSSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKVDRLLHLGGGSRFASKPL 1275
+R V P LFG G+A E++G+ A +A + V+A L+ QQK L E V+DR +IL+IF ERA T E +LQ +LA L Y+A LV+S + +RQRGG G +GG GE +EA RR++RDR A + ++L V+R RG RG R + P +ALVGYTN GKS+L N++T + V A + +F TLDPT+R V +P + +L DTVGF+ DLPT+LV +FRATLEEV AD++LHVRD S ++Q+A VE+ L LG + P LEVWNK+D + S E +DR + + + VSA+TGEG+D+L +++ RLLH G + P+
Sbjct: 60 IRQVRPASLFGKGQAEELAGIAEAADAKLLIVDASLTPVQQKTL-EDLTKCKVIDRTGLILEIFGERAATAEGRLQV-ELAHLDYQAGRLVRSW-------THLERQRGGFGFLGGPGETQIEADRRMIRDRMARIRKELDQVKRTRGLHRGRRQKAPWPVIALVGYTNAGKSTLFNRMTQAS----------------------------------------VMAEDLLFATLDPTMRQVRIPGFDKAILSDTVGFVSDLPTELVAAFRATLEEVASADLILHVRDVSHPDT--DAQKADVEQVLGVLGLNEEDSPPRLEVWNKIDAL---------SRLDRSEIEGESDRRD---------------------------------DVVAVSALTGEGVDVLRDEISRLLHSGAQTHIVRIPV 390
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: UPI00131BC6D6 (GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI00131BC6D6) HSP 1 Score: 216 bits (551), Expect = 3.560e-62 Identity = 156/410 (38.05%), Postives = 209/410 (50.98%), Query Frame = 1
Query: 1 QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPT--LEVWNKVDKEVVVAVQSDGDNISSSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKV 1224
+++ LR+ P LFG G+ E+ V+ ++ V V+ L+ QQ+ L + W A V+DR +IL+IFA RART E KLQ +LARL YE + LV++ + +RQRGG G +GG GE +EA RRLL DR + L+DV R R R AR R PTVALVGYTN GKS+L N+LT G V A++ +F TLDPT+R++ LP +L DTVGFI DLP +LV +FRATLEEV ADV+LHVRD S E++ VE L +LG P +EVWNK+D+ A + E+ ++ A G SG A+ VSA+TGEG D+LL ++
Sbjct: 38 EIIQLRTTRPATLFGKGRVDEVGAKVADLDIQVVVVDDALTPVQQRNLEKAWN-AKVMDRTGLILEIFARRARTREGKLQV-ELARLSYERSRLVRTW-------THLERQRGGFGFLGGPGESQIEADRRLLADRMVRLRADLEDVRRTRALHRSARGRVPYPTVALVGYTNAGKSTLFNRLT----------------------------------------DGQVLAKDMLFATLDPTLRTLKLPDGRPAILSDTVGFISDLPHELVAAFRATLEEVESADVILHVRDISSPQSATEAKD--VELVLEQLGIEATPERMIEVWNKLDQ--------------------APEDEQAALHARAR------------------RAGESGPEAVAVSALTGEGCDLLLRRI 358
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A2S6R5J5_9PROT (GTPase HflX (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin1 TaxID=2013103 RepID=A0A2S6R5J5_9PROT) HSP 1 Score: 213 bits (543), Expect = 1.050e-61 Identity = 143/330 (43.33%), Postives = 184/330 (55.76%), Query Frame = 1
Query: 4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPT---LEVWNKVD 984
VVP+ V P LFGSGK AE+ +++ + A V V+ L+ QQ+ L W V+DR +IL+IF RART E KLQ +LA L Y+ + LV+S + +RQRGG+G +GG GE +EA RR +R+R A + R LK+V R RG R AR R P VALVGYTN GKS+L N+LT + V +++VF TLDPT+R +TLPSR R +L DTVGF+ DLP DLV +FRATLEEV AD++LHVRD S QR V + LAELG D +E+ NK D
Sbjct: 8 VVPVPRVRPATLFGSGKVAEIGEIIAELGAGVVVVDGSLTPIQQRNLERAWD-CKVIDRTALILEIFGARARTREGKLQV-ELAALNYQRSRLVRSW-------THLERQRGGVGFLGGPGETQIEADRRQIRERIARLKRDLKNVVRTRGLHRAARQRVPYPVVALVGYTNAGKSTLFNRLTGAD----------------------------------------VDVKDQVFATLDPTMRGLTLPSRRRVILSDTVGFVSDLPHDLVAAFRATLEEVAEADLILHVRDISHTETAQ--QRQDVHDVLAELGMEDKVKSGLIEILNKTD 286
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A2D4VN43_9HYPH (GTPase HflX n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VN43_9HYPH) HSP 1 Score: 216 bits (549), Expect = 1.310e-61 Identity = 162/418 (38.76%), Postives = 221/418 (52.87%), Query Frame = 1
Query: 4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELG-------ALDVPTLEVWNKVDKEVVVAVQSDGDNISSSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKVDRLL 1236
+VPL++V P L G GK E+ G ++A++ + V V++ LS QQ+ L W+ V+DR +IL+IF ERA T E LQ +LA L Y+ + LV+S + +RQRGGLG VGG GE +EA RR+L++R ++ RQL+ V+R R R R P VALVGYTN GKS+L N++T E GVF A N +F TLDPT+RS+ LPS + +L DTVGFI DLPT LV +FRATLEEV A +++HVRDAS E E Q+A VE+ LA LG A D LEV NK+D+ + A Q+D A+REE + + +SA+TGEG++ LL+++D L+
Sbjct: 56 IVPLQNVRPSTLVGEGKLEELKGEIAALDVELVVVDSALSPVQQRNLERAWK-VKVVDRTGLILEIFGERANTREGALQV-ELAHLNYQKSRLVRSW-------THLERQRGGLGFVGGPGETQIEADRRMLQERITKLERQLETVKRTRELHRKTRRDAPYPVVALVGYTNAGKSTLFNRVT-----------------------EAGVF-----------------AENLLFATLDPTMRSIELPSGRKVILSDTVGFISDLPTHLVAAFRATLEEVLEAQLIIHVRDASHEET--EIQKADVEKVLASLGVTPETMSANDQHVLEVLNKLDR--LPAEQADALR-------NMAEREE---------------------------------DTVAMSALTGEGVETLLQRIDDLV 380
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A1E3VSH6_9HYPH (GTPase HflX n=2 Tax=Methyloceanibacter superfactus TaxID=1774969 RepID=A0A1E3VSH6_9HYPH) HSP 1 Score: 216 bits (549), Expect = 1.550e-61 Identity = 160/416 (38.46%), Postives = 214/416 (51.44%), Query Frame = 1
Query: 4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELG----ALDVPTLEVWNKVDKEVVVAVQSDGDNISSSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKVDRLLH 1239
+VP+ P LFG+GK E++G+V A A+ V V+ PL+ QQ+ L W A VLDR +IL+IF ERART E +LQ +LA L Y+ + LV+S + +RQRGG G +GG GE +E RRLL +R + ++L+ V R R R +R R P VALVGYTN GKS+L N LT + V A + +F TLDPT+R++ LP ++ VL DTVGFI DLPT LV +FRATLEEV++AD++LHVRD + EA SQRA V LA+LG A LEVWNK D ++ G + ADR + A+ VSA+TGEGLD+LL +++ L+
Sbjct: 73 LVPVPHPKPATLFGTGKVEELAGLVRAEGAELVIVDHPLTPVQQRNLERAWD-AKVLDRTGLILEIFGERARTREGRLQV-ELAHLVYQKSRLVRSW-------THLERQRGGFGFLGGPGETQIETDRRLLSERIIVIRKELEQVRRTRALHRKSRQRVPYPAVALVGYTNAGKSTLFNTLTAAD----------------------------------------VVAEDILFATLDPTIRALRLPGGSKAVLSDTVGFISDLPTTLVAAFRATLEEVQQADLILHVRDIADEATA--SQRADVNAVLADLGIDADAEPDRALEVWNKAD---LLDAAEQGSTANE------ADRHD----------------------------------AVLVSAITGEGLDVLLAEIEHRLN 394
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A2M7SZA5_9PROT (GTPase HflX n=1 Tax=Alphaproteobacteria bacterium CG_4_10_14_0_8_um_filter_53_9 TaxID=1973898 RepID=A0A2M7SZA5_9PROT) HSP 1 Score: 214 bits (545), Expect = 2.110e-61 Identity = 150/351 (42.74%), Postives = 196/351 (55.84%), Query Frame = 1
Query: 1 QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPTLEVWNK---VDKEVVVAVQSDGDNISSSGGE 1044
+ V L V+P L G GK E++ V+ + A V V+A LS QQ+ L E+ GA VLDR +IL+IF ERART +LQ +LARL YE + LV+ + +RQRGG+G GG GE+ LE +R+LR R A V R+L DVE+ RG QR AR + PTVALVGYTN GKS+L N+L + G A + +F TLDP +R + LP VLVDTVGF+ DLP +LV +F+ATLEEV ADVLLHV DA+ R E+Q A V E L +LGA D ++V+NK +D + V DG ++S+ GE
Sbjct: 44 EFVNLSKVNPPLLLGGGKVDELTEKVAEMEARLVIVDAALSPRQQRNLEERL-GAKVLDRTGLILEIFGERARTRAGRLQV-ELARLTYEQSRLVRQW-------THLERQRGGMGKTGGPGERQLELDKRMLRTRMAAVRRELADVEQTRGLQRMARGKAALPTVALVGYTNAGKSTLFNRLV-----------------------DAGTLMA-----------------DALFATLDPLMRKLKLPDGLEVVLVDTVGFVSDLPHELVEAFKATLEEVVMADVLLHVHDAATPER--EAQAADVREVLRQLGAADKTVVQVYNKADMLDDDARALVPVDGLSVSAKTGE 343
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A2Z3HQG2_9CAUL (GTPase HflX n=1 Tax=Phenylobacterium parvum TaxID=2201350 RepID=A0A2Z3HQG2_9CAUL) HSP 1 Score: 214 bits (546), Expect = 2.440e-61 Identity = 144/331 (43.50%), Postives = 191/331 (57.70%), Query Frame = 1
Query: 4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRD-ASVEARVYESQRAAVEETLAELGA--LDVPTLEVWNKVDK 987
+V LR + P LFGSGK E++ + AV AD V V+ L+ QQ+ L + W+ V+DR +IL+IFA RART E +LQ +LARL YE + LV++ + +RQRGG G +GG GE +E RRL+ DR + R+L +V R R QR AR R P+VALVGYTN GKS+L N+LT +AG V AR+ +F TLDPT+R++ LP VL DTVGFI DLP +LV +FRATLEEV+ ADV+LHVRD AS ++ +++ A V E L LG + +EVWNK D+
Sbjct: 54 IVNLRRLTPATLFGSGKVEEIAALCEAVEADVVVVDDSLTPVQQRNLEKAWK-VKVIDRTGLILEIFARRARTREGRLQV-ELARLSYERSRLVRTW-------THLERQRGGFGVMGGPGETQIETDRRLIADRIGRLKRELDEVRRTRTLQRAARQRAPAPSVALVGYTNAGKSTLFNRLT----------------------------SAG------------VEARDMLFATLDPTLRTLRLPGGRPVVLSDTVGFISDLPHELVEAFRATLEEVKEADVILHVRDIASADS---DAEAADVREVLQRLGVEMAERRVIEVWNKADR 332
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: B4RBT9_PHEZH (GTPase HflX n=1 Tax=Phenylobacterium zucineum (strain HLK1) TaxID=450851 RepID=B4RBT9_PHEZH) HSP 1 Score: 214 bits (545), Expect = 2.460e-61 Identity = 145/330 (43.94%), Postives = 188/330 (56.97%), Query Frame = 1
Query: 4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPT---LEVWNKVD 984
V PLR + P LFG GK E++ VV +V AD V V+ L+ QQ+ L + W+ A V+DR +IL+IFA RART E +LQ +LARL YE + LV++ + +RQRGG G +GG GE +E RRLL ++ ++ R+L +V R R QR AR R PTVALVGYTN GKS+L N+LT + V A++ +F TLDPT+R + LP +L DTVGFI DLP +LV +FRATLEEVR ADV+LHVRD + E E+Q V L LG +D+ LEVWNKVD
Sbjct: 39 VAPLRRLTPATLFGKGKVEEVAAVVDSVEADVVVVDDALTPVQQRNLEKAWK-AKVIDRTGLILEIFARRARTREGRLQV-ELARLTYERSRLVRTW-------THLERQRGGFGVMGGPGETQIETDRRLLAEKIGKLKRELVEVRRTRTLQRSARRRVPYPTVALVGYTNAGKSTLFNRLTQAE----------------------------------------VLAQDMLFATLDPTLRMLKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVREADVVLHVRDIASEET--EAQAQDVRTVLQRLG-VDMDERRILEVWNKVD 316
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: UPI000BAAD054 (GTPase HflX n=1 Tax=Actibacterium ureilyticum TaxID=1590614 RepID=UPI000BAAD054) HSP 1 Score: 214 bits (544), Expect = 3.830e-61 Identity = 139/330 (42.12%), Postives = 189/330 (57.27%), Query Frame = 1
Query: 1 QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELG-ALDVPTLEVWNKVDK 987
++VPL V P +LFGSGK E+ + + + V ++ P++ QQ+ L ++W G +LDR +IL+IFA+RART E LQ +LA L Y+ LV++ + +RQRGGLG VGG GE +EA RR + + + RQL V + R R AR + P VALVGYTN GKS+L N+LT + V A++ +F TLDPT+R+VTLPS + +L DTVGFI DLPT LV +FRATLEEVR AD++ HVRD S + +Q A V+ LA+LG A D P LE+WNK+D+
Sbjct: 54 EIVPLPKVRPGYLFGSGKIDELGERLKSAEIELVLIDGPVTPVQQRNLEKQW-GLKILDRTGLILEIFADRARTREGVLQV-ELAALSYQRTRLVRAW-------THLERQRGGLGFVGGPGETQIEADRRAIDEAITRLRRQLSKVVKTRDLHRAARKKVPFPVVALVGYTNAGKSTLFNRLTGAE----------------------------------------VLAKDMLFATLDPTMRAVTLPSGRQVILSDTVGFISDLPTQLVAAFRATLEEVREADLICHVRDISHPDHM--AQAADVDAILADLGIAEDTPRLELWNKIDQ 332 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig100.231.1 >prot_D-herbacea_F_contig100.231.1 ID=prot_D-herbacea_F_contig100.231.1|Name=mRNA_D-herbacea_F_contig100.231.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=441bp QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEback to top mRNA from alignment at D-herbacea_F_contig100:550164..552667+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig100.231.1 ID=mRNA_D-herbacea_F_contig100.231.1|Name=mRNA_D-herbacea_F_contig100.231.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=2504bp|location=Sequence derived from alignment at D-herbacea_F_contig100:550164..552667+ (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig100:550164..552667+ >mRNA_D-herbacea_F_contig100.231.1 ID=mRNA_D-herbacea_F_contig100.231.1|Name=mRNA_D-herbacea_F_contig100.231.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2646bp|location=Sequence derived from alignment at D-herbacea_F_contig100:550164..552667+ (Desmarestia herbacea DmunF female)back to top |