mRNA_D-herbacea_F_contig100.231.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig100.231.1
Unique NamemRNA_D-herbacea_F_contig100.231.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A6H5JZG8_9PHAE (Hflx-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZG8_9PHAE)

HSP 1 Score: 468 bits (1203), Expect = 4.720e-159
Identity = 292/467 (62.53%), Postives = 336/467 (71.95%), Query Frame = 1
Query:    1 QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQAR--QLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPTLEVWNKVDKEVVVAVQSDGDNIS------------------SSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKVDRLLHLGGGS-------RFASKPLDRYRYVRVLPGQTQQ 1320
            +VV LR+VHPKF+FGSGK +EMSG +SA +ADTVFVNAPLSG QQK L+ +W GATVLDRF VILDIFA+RARTTEAKLQAR  +LA LKY+AAHLV      KG  SG+DRQ GG+G +GGSGEKA++ QR+LLR+RTAEV+RQLKDVERRRGFQR +R+RRLE +VALVGYTNVGKSSL+NQL L  H   G GG G      G+G E G    G XXXXXXXX  MV ARNRVFDTLDPTVRSVTLPSR RCVLVDTVGFIQDLPTDLVHSF++TLEEV+ ADVLLHVRDASVE RV E+ R AV+ETLAELGA   PTLEVWNKVDKE  V  ++ G                      S   E  A++    + G A  GG                TGP  + AIRVSA +G+GL  LLE++D +LHL GG+       RF+ KP+DRY YVRVLPGQ+QQ
Sbjct:   50 EVVQLRNVHPKFVFGSGKTSEMSGAISAADADTVFVNAPLSGQQQKALSAEWGGATVLDRFAVILDIFADRARTTEAKLQARVVELAMLKYKAAHLV------KGSGSGFDRQGGGIGTMGGSGEKAIDTQRQLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHNTRGVGGGG--GNREGKGSERGRRFDGAXXXXXXXX--MVQARNRVFDTLDPTVRSVTLPSRVRCVLVDTVGFIQDLPTDLVHSFKSTLEEVKSADVLLHVRDASVEPRVGEAHRKAVQETLAELGAGGRPTLEVWNKVDKERRVDPENRGAXXXXXXXXXXXXXXXXXXXDMSLPDEAKAEKANGRMEGPAGEGGSRLSHAGEG------RTGPDDEGAIRVSAASGQGLAHLLERIDAMLHLNGGADGEGSGRRFSIKPIDRYEYVRVLPGQSQQ 500          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: UPI00056245B2 (GTPase HflX n=1 Tax=Sphingomonas jaspsi TaxID=392409 RepID=UPI00056245B2)

HSP 1 Score: 219 bits (558), Expect = 3.670e-63
Identity = 155/424 (36.56%), Postives = 217/424 (51.18%), Query Frame = 1
Query:   13 LRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDV---PTLEVWNKVDKEVVVAVQSDGDNISSSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKVDRLLHLGGGSRFASKPL 1275
            +R V P  LFG G+A E++G+  A +A  + V+A L+  QQK L E      V+DR  +IL+IF ERA T E +LQ  +LA L Y+A  LV+S        +  +RQRGG G +GG GE  +EA RR++RDR A + ++L  V+R RG  RG R +   P +ALVGYTN GKS+L N++T +                                         V A + +F TLDPT+R V +P   + +L DTVGF+ DLPT+LV +FRATLEEV  AD++LHVRD S      ++Q+A VE+ L  LG  +    P LEVWNK+D             +  S  E  +DR +                                 + + VSA+TGEG+D+L +++ RLLH G  +     P+
Sbjct:   60 IRQVRPASLFGKGQAEELAGIAEAADAKLLIVDASLTPVQQKTL-EDLTKCKVIDRTGLILEIFGERAATAEGRLQV-ELAHLDYQAGRLVRSW-------THLERQRGGFGFLGGPGETQIEADRRMIRDRMARIRKELDQVKRTRGLHRGRRQKAPWPVIALVGYTNAGKSTLFNRMTQAS----------------------------------------VMAEDLLFATLDPTMRQVRIPGFDKAILSDTVGFVSDLPTELVAAFRATLEEVASADLILHVRDVSHPDT--DAQKADVEQVLGVLGLNEEDSPPRLEVWNKIDAL---------SRLDRSEIEGESDRRD---------------------------------DVVAVSALTGEGVDVLRDEISRLLHSGAQTHIVRIPV 390          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: UPI00131BC6D6 (GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641861 RepID=UPI00131BC6D6)

HSP 1 Score: 216 bits (551), Expect = 3.560e-62
Identity = 156/410 (38.05%), Postives = 209/410 (50.98%), Query Frame = 1
Query:    1 QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPT--LEVWNKVDKEVVVAVQSDGDNISSSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKV 1224
            +++ LR+  P  LFG G+  E+   V+ ++   V V+  L+  QQ+ L + W  A V+DR  +IL+IFA RART E KLQ  +LARL YE + LV++        +  +RQRGG G +GG GE  +EA RRLL DR   +   L+DV R R   R AR R   PTVALVGYTN GKS+L N+LT                                         G V A++ +F TLDPT+R++ LP     +L DTVGFI DLP +LV +FRATLEEV  ADV+LHVRD S      E++   VE  L +LG    P   +EVWNK+D+                    A + E+  ++  A                     G SG  A+ VSA+TGEG D+LL ++
Sbjct:   38 EIIQLRTTRPATLFGKGRVDEVGAKVADLDIQVVVVDDALTPVQQRNLEKAWN-AKVMDRTGLILEIFARRARTREGKLQV-ELARLSYERSRLVRTW-------THLERQRGGFGFLGGPGESQIEADRRLLADRMVRLRADLEDVRRTRALHRSARGRVPYPTVALVGYTNAGKSTLFNRLT----------------------------------------DGQVLAKDMLFATLDPTLRTLKLPDGRPAILSDTVGFISDLPHELVAAFRATLEEVESADVILHVRDISSPQSATEAKD--VELVLEQLGIEATPERMIEVWNKLDQ--------------------APEDEQAALHARAR------------------RAGESGPEAVAVSALTGEGCDLLLRRI 358          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A2S6R5J5_9PROT (GTPase HflX (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin1 TaxID=2013103 RepID=A0A2S6R5J5_9PROT)

HSP 1 Score: 213 bits (543), Expect = 1.050e-61
Identity = 143/330 (43.33%), Postives = 184/330 (55.76%), Query Frame = 1
Query:    4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPT---LEVWNKVD 984
            VVP+  V P  LFGSGK AE+  +++ + A  V V+  L+  QQ+ L   W    V+DR  +IL+IF  RART E KLQ  +LA L Y+ + LV+S        +  +RQRGG+G +GG GE  +EA RR +R+R A + R LK+V R RG  R AR R   P VALVGYTN GKS+L N+LT +                                         V  +++VF TLDPT+R +TLPSR R +L DTVGF+ DLP DLV +FRATLEEV  AD++LHVRD S        QR  V + LAELG  D      +E+ NK D
Sbjct:    8 VVPVPRVRPATLFGSGKVAEIGEIIAELGAGVVVVDGSLTPIQQRNLERAWD-CKVIDRTALILEIFGARARTREGKLQV-ELAALNYQRSRLVRSW-------THLERQRGGVGFLGGPGETQIEADRRQIRERIARLKRDLKNVVRTRGLHRAARQRVPYPVVALVGYTNAGKSTLFNRLTGAD----------------------------------------VDVKDQVFATLDPTMRGLTLPSRRRVILSDTVGFVSDLPHDLVAAFRATLEEVAEADLILHVRDISHTETAQ--QRQDVHDVLAELGMEDKVKSGLIEILNKTD 286          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A2D4VN43_9HYPH (GTPase HflX n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VN43_9HYPH)

HSP 1 Score: 216 bits (549), Expect = 1.310e-61
Identity = 162/418 (38.76%), Postives = 221/418 (52.87%), Query Frame = 1
Query:    4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELG-------ALDVPTLEVWNKVDKEVVVAVQSDGDNISSSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKVDRLL 1236
            +VPL++V P  L G GK  E+ G ++A++ + V V++ LS  QQ+ L   W+   V+DR  +IL+IF ERA T E  LQ  +LA L Y+ + LV+S        +  +RQRGGLG VGG GE  +EA RR+L++R  ++ RQL+ V+R R   R  R     P VALVGYTN GKS+L N++T                       E GVF                 A N +F TLDPT+RS+ LPS  + +L DTVGFI DLPT LV +FRATLEEV  A +++HVRDAS E    E Q+A VE+ LA LG       A D   LEV NK+D+  + A Q+D            A+REE                                 + + +SA+TGEG++ LL+++D L+
Sbjct:   56 IVPLQNVRPSTLVGEGKLEELKGEIAALDVELVVVDSALSPVQQRNLERAWK-VKVVDRTGLILEIFGERANTREGALQV-ELAHLNYQKSRLVRSW-------THLERQRGGLGFVGGPGETQIEADRRMLQERITKLERQLETVKRTRELHRKTRRDAPYPVVALVGYTNAGKSTLFNRVT-----------------------EAGVF-----------------AENLLFATLDPTMRSIELPSGRKVILSDTVGFISDLPTHLVAAFRATLEEVLEAQLIIHVRDASHEET--EIQKADVEKVLASLGVTPETMSANDQHVLEVLNKLDR--LPAEQADALR-------NMAEREE---------------------------------DTVAMSALTGEGVETLLQRIDDLV 380          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A1E3VSH6_9HYPH (GTPase HflX n=2 Tax=Methyloceanibacter superfactus TaxID=1774969 RepID=A0A1E3VSH6_9HYPH)

HSP 1 Score: 216 bits (549), Expect = 1.550e-61
Identity = 160/416 (38.46%), Postives = 214/416 (51.44%), Query Frame = 1
Query:    4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELG----ALDVPTLEVWNKVDKEVVVAVQSDGDNISSSGGELAADREELGINGNAEGGGXXXXXXXXXXXXXGDMTGPSGKNAIRVSAVTGEGLDILLEKVDRLLH 1239
            +VP+    P  LFG+GK  E++G+V A  A+ V V+ PL+  QQ+ L   W  A VLDR  +IL+IF ERART E +LQ  +LA L Y+ + LV+S        +  +RQRGG G +GG GE  +E  RRLL +R   + ++L+ V R R   R +R R   P VALVGYTN GKS+L N LT +                                         V A + +F TLDPT+R++ LP  ++ VL DTVGFI DLPT LV +FRATLEEV++AD++LHVRD + EA    SQRA V   LA+LG    A     LEVWNK D   ++     G   +       ADR +                                  A+ VSA+TGEGLD+LL +++  L+
Sbjct:   73 LVPVPHPKPATLFGTGKVEELAGLVRAEGAELVIVDHPLTPVQQRNLERAWD-AKVLDRTGLILEIFGERARTREGRLQV-ELAHLVYQKSRLVRSW-------THLERQRGGFGFLGGPGETQIETDRRLLSERIIVIRKELEQVRRTRALHRKSRQRVPYPAVALVGYTNAGKSTLFNTLTAAD----------------------------------------VVAEDILFATLDPTIRALRLPGGSKAVLSDTVGFISDLPTTLVAAFRATLEEVQQADLILHVRDIADEATA--SQRADVNAVLADLGIDADAEPDRALEVWNKAD---LLDAAEQGSTANE------ADRHD----------------------------------AVLVSAITGEGLDVLLAEIEHRLN 394          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A2M7SZA5_9PROT (GTPase HflX n=1 Tax=Alphaproteobacteria bacterium CG_4_10_14_0_8_um_filter_53_9 TaxID=1973898 RepID=A0A2M7SZA5_9PROT)

HSP 1 Score: 214 bits (545), Expect = 2.110e-61
Identity = 150/351 (42.74%), Postives = 196/351 (55.84%), Query Frame = 1
Query:    1 QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPTLEVWNK---VDKEVVVAVQSDGDNISSSGGE 1044
            + V L  V+P  L G GK  E++  V+ + A  V V+A LS  QQ+ L E+  GA VLDR  +IL+IF ERART   +LQ  +LARL YE + LV+         +  +RQRGG+G  GG GE+ LE  +R+LR R A V R+L DVE+ RG QR AR +   PTVALVGYTN GKS+L N+L                        + G   A                 + +F TLDP +R + LP     VLVDTVGF+ DLP +LV +F+ATLEEV  ADVLLHV DA+   R  E+Q A V E L +LGA D   ++V+NK   +D +    V  DG ++S+  GE
Sbjct:   44 EFVNLSKVNPPLLLGGGKVDELTEKVAEMEARLVIVDAALSPRQQRNLEERL-GAKVLDRTGLILEIFGERARTRAGRLQV-ELARLTYEQSRLVRQW-------THLERQRGGMGKTGGPGERQLELDKRMLRTRMAAVRRELADVEQTRGLQRMARGKAALPTVALVGYTNAGKSTLFNRLV-----------------------DAGTLMA-----------------DALFATLDPLMRKLKLPDGLEVVLVDTVGFVSDLPHELVEAFKATLEEVVMADVLLHVHDAATPER--EAQAADVREVLRQLGAADKTVVQVYNKADMLDDDARALVPVDGLSVSAKTGE 343          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: A0A2Z3HQG2_9CAUL (GTPase HflX n=1 Tax=Phenylobacterium parvum TaxID=2201350 RepID=A0A2Z3HQG2_9CAUL)

HSP 1 Score: 214 bits (546), Expect = 2.440e-61
Identity = 144/331 (43.50%), Postives = 191/331 (57.70%), Query Frame = 1
Query:    4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRD-ASVEARVYESQRAAVEETLAELGA--LDVPTLEVWNKVDK 987
            +V LR + P  LFGSGK  E++ +  AV AD V V+  L+  QQ+ L + W+   V+DR  +IL+IFA RART E +LQ  +LARL YE + LV++        +  +RQRGG G +GG GE  +E  RRL+ DR   + R+L +V R R  QR AR R   P+VALVGYTN GKS+L N+LT                            +AG            V AR+ +F TLDPT+R++ LP     VL DTVGFI DLP +LV +FRATLEEV+ ADV+LHVRD AS ++   +++ A V E L  LG    +   +EVWNK D+
Sbjct:   54 IVNLRRLTPATLFGSGKVEEIAALCEAVEADVVVVDDSLTPVQQRNLEKAWK-VKVIDRTGLILEIFARRARTREGRLQV-ELARLSYERSRLVRTW-------THLERQRGGFGVMGGPGETQIETDRRLIADRIGRLKRELDEVRRTRTLQRAARQRAPAPSVALVGYTNAGKSTLFNRLT----------------------------SAG------------VEARDMLFATLDPTLRTLRLPGGRPVVLSDTVGFISDLPHELVEAFRATLEEVKEADVILHVRDIASADS---DAEAADVREVLQRLGVEMAERRVIEVWNKADR 332          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: B4RBT9_PHEZH (GTPase HflX n=1 Tax=Phenylobacterium zucineum (strain HLK1) TaxID=450851 RepID=B4RBT9_PHEZH)

HSP 1 Score: 214 bits (545), Expect = 2.460e-61
Identity = 145/330 (43.94%), Postives = 188/330 (56.97%), Query Frame = 1
Query:    4 VVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELGALDVPT---LEVWNKVD 984
            V PLR + P  LFG GK  E++ VV +V AD V V+  L+  QQ+ L + W+ A V+DR  +IL+IFA RART E +LQ  +LARL YE + LV++        +  +RQRGG G +GG GE  +E  RRLL ++  ++ R+L +V R R  QR AR R   PTVALVGYTN GKS+L N+LT +                                         V A++ +F TLDPT+R + LP     +L DTVGFI DLP +LV +FRATLEEVR ADV+LHVRD + E    E+Q   V   L  LG +D+     LEVWNKVD
Sbjct:   39 VAPLRRLTPATLFGKGKVEEVAAVVDSVEADVVVVDDALTPVQQRNLEKAWK-AKVIDRTGLILEIFARRARTREGRLQV-ELARLTYERSRLVRTW-------THLERQRGGFGVMGGPGETQIETDRRLLAEKIGKLKRELVEVRRTRTLQRSARRRVPYPTVALVGYTNAGKSTLFNRLTQAE----------------------------------------VLAQDMLFATLDPTLRMLKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVREADVVLHVRDIASEET--EAQAQDVRTVLQRLG-VDMDERRILEVWNKVD 316          
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Match: UPI000BAAD054 (GTPase HflX n=1 Tax=Actibacterium ureilyticum TaxID=1590614 RepID=UPI000BAAD054)

HSP 1 Score: 214 bits (544), Expect = 3.830e-61
Identity = 139/330 (42.12%), Postives = 189/330 (57.27%), Query Frame = 1
Query:    1 QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAEKWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGANKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERRRGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGAAATGRGGEGGVFNAGXXXXXXXXXXGMVHARNRVFDTLDPTVRSVTLPSRARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYESQRAAVEETLAELG-ALDVPTLEVWNKVDK 987
            ++VPL  V P +LFGSGK  E+   + +   + V ++ P++  QQ+ L ++W G  +LDR  +IL+IFA+RART E  LQ  +LA L Y+   LV++        +  +RQRGGLG VGG GE  +EA RR + +    + RQL  V + R   R AR +   P VALVGYTN GKS+L N+LT +                                         V A++ +F TLDPT+R+VTLPS  + +L DTVGFI DLPT LV +FRATLEEVR AD++ HVRD S    +  +Q A V+  LA+LG A D P LE+WNK+D+
Sbjct:   54 EIVPLPKVRPGYLFGSGKIDELGERLKSAEIELVLIDGPVTPVQQRNLEKQW-GLKILDRTGLILEIFADRARTREGVLQV-ELAALSYQRTRLVRAW-------THLERQRGGLGFVGGPGETQIEADRRAIDEAITRLRRQLSKVVKTRDLHRAARKKVPFPVVALVGYTNAGKSTLFNRLTGAE----------------------------------------VLAKDMLFATLDPTMRAVTLPSGRQVILSDTVGFISDLPTQLVAAFRATLEEVREADLICHVRDISHPDHM--AQAADVDAILADLGIAEDTPRLELWNKIDQ 332          
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZG8_9PHAE4.720e-15962.53Hflx-type G domain-containing protein n=2 Tax=Ecto... [more]
UPI00056245B23.670e-6336.56GTPase HflX n=1 Tax=Sphingomonas jaspsi TaxID=3924... [more]
UPI00131BC6D63.560e-6238.05GTPase HflX n=1 Tax=Caulobacter sp. S45 TaxID=1641... [more]
A0A2S6R5J5_9PROT1.050e-6143.33GTPase HflX (Fragment) n=1 Tax=Alphaproteobacteria... [more]
A0A2D4VN43_9HYPH1.310e-6138.76GTPase HflX n=2 Tax=Parvibaculum TaxID=256616 RepI... [more]
A0A1E3VSH6_9HYPH1.550e-6138.46GTPase HflX n=2 Tax=Methyloceanibacter superfactus... [more]
A0A2M7SZA5_9PROT2.110e-6142.74GTPase HflX n=1 Tax=Alphaproteobacteria bacterium ... [more]
A0A2Z3HQG2_9CAUL2.440e-6143.50GTPase HflX n=1 Tax=Phenylobacterium parvum TaxID=... [more]
B4RBT9_PHEZH2.460e-6143.94GTPase HflX n=1 Tax=Phenylobacterium zucineum (str... [more]
UPI000BAAD0543.830e-6142.12GTPase HflX n=1 Tax=Actibacterium ureilyticum TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:550164..552667 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score489.2
Seed ortholog evalue2e-135
Seed eggNOG ortholog2880.D7FHX0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ribosome binding
EggNOG OGsCOG2262@1,KOG0410@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1323
Cds size1323
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.231.1prot_D-herbacea_F_contig100.231.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig100 550164..552667 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927415.572792-CDS-D-herbacea_F_contig100:550163..5504101622927415.572792-CDS-D-herbacea_F_contig100:550163..550410Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 550164..550410 +
1690790158.751381-CDS-D-herbacea_F_contig100:550163..5504101690790158.751381-CDS-D-herbacea_F_contig100:550163..550410Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 550164..550410 +
1622927415.5825276-CDS-D-herbacea_F_contig100:550793..5513011622927415.5825276-CDS-D-herbacea_F_contig100:550793..551301Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 550794..551301 +
1690790158.7622426-CDS-D-herbacea_F_contig100:550793..5513011690790158.7622426-CDS-D-herbacea_F_contig100:550793..551301Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 550794..551301 +
1622927415.592724-CDS-D-herbacea_F_contig100:551949..5523411622927415.592724-CDS-D-herbacea_F_contig100:551949..552341Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 551950..552341 +
1690790158.7708635-CDS-D-herbacea_F_contig100:551949..5523411690790158.7708635-CDS-D-herbacea_F_contig100:551949..552341Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 551950..552341 +
1622927415.604748-CDS-D-herbacea_F_contig100:552491..5526671622927415.604748-CDS-D-herbacea_F_contig100:552491..552667Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 552492..552667 +
1690790158.780011-CDS-D-herbacea_F_contig100:552491..5526671690790158.780011-CDS-D-herbacea_F_contig100:552491..552667Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 552492..552667 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig100.231.1

>prot_D-herbacea_F_contig100.231.1 ID=prot_D-herbacea_F_contig100.231.1|Name=mRNA_D-herbacea_F_contig100.231.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=441bp
QVVPLRSVHPKFLFGSGKAAEMSGVVSAVNADTVFVNAPLSGAQQKGLAE
KWQGATVLDRFRVILDIFAERARTTEAKLQARQLARLKYEAAHLVQSGGA
NKGRDSGYDRQRGGLGAVGGSGEKALEAQRRLLRDRTAEVNRQLKDVERR
RGFQRGARNRRLEPTVALVGYTNVGKSSLLNQLTLSHHRGGGFGGRGVGA
AATGRGGEGGVFNAGGGGWGGGRGRGMVHARNRVFDTLDPTVRSVTLPSR
ARCVLVDTVGFIQDLPTDLVHSFRATLEEVRRADVLLHVRDASVEARVYE
SQRAAVEETLAELGALDVPTLEVWNKVDKEVVVAVQSDGDNISSSGGELA
ADREELGINGNAEGGGAGGGDGRSRGTERGDMTGPSGKNAIRVSAVTGEG
LDILLEKVDRLLHLGGGSRFASKPLDRYRYVRVLPGQTQQ*
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mRNA from alignment at D-herbacea_F_contig100:550164..552667+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig100.231.1 ID=mRNA_D-herbacea_F_contig100.231.1|Name=mRNA_D-herbacea_F_contig100.231.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=2504bp|location=Sequence derived from alignment at D-herbacea_F_contig100:550164..552667+ (Desmarestia herbacea DmunF female)
CAGGTGGTGCCCCTCCGTAGCGTGCACCCTAAGTTCCTGTTCGGCAGCGG CAAGGCCGCCGAGATGTCGGGCGTTGTGAGCGCCGTCAACGCCGACACGG TCTTCGTCAATGCGCCTTTGTCCGGCGCGCAGCAGAAGGGGCTCGCGGAG AAGTGGCAGGGCGCGACTGTACTCGATCGATTTAGAGTTATCCTGGACAT TTTCGCGGAGAGGGCTAGGACGACCGAGGCGAAGCTTCAGGCAAGGCGTG CTTATCGCGTTAGCTGGATAGGAGACGATGGCTGAGTTTTTTTTGTGTTC TCGTACCTTGTTGCTACGTGGGATTAGGTTGTGAGATCGGAAAGGAGGTG TGGACGAGCAAGGGATCGAACCCCCCTCTCCCCCACTCCCCCTTATTTTT TCTTTCTTTCAGCGAATGTGAAAGTTTTTAAGCAACCGGTTTTGCTCGTT ATCTCGATCTTCTTCCAACCAAGGCAAGTTTCCTGCGTGGTACACACACC AGCCTTGGTAAGCATCATATATCATGGGTGCTCTGTGTTTTTCCTGCTAC TGCCTCGCAAAAACAGAGCAACCACCCTCCCTCCCCCTTGCACGCTCCGT CCAAACCCGTGTCCCGCACACCTCAGGTAGAACTGGCTCGGCTAAAATAC GAAGCAGCGCACCTCGTACAGTCCGGCGGCGCCAATAAGGGCCGCGACAG TGGGTACGACCGACAGCGCGGCGGTCTGGGGGCCGTGGGAGGGTCCGGTG AAAAGGCTCTTGAGGCCCAAAGACGCCTCCTGCGTGACCGCACGGCCGAG GTAAACCGGCAACTCAAAGATGTAGAGCGTCGGCGTGGTTTCCAGAGGGG CGCGCGCAACCGGAGACTGGAGCCGACCGTGGCGCTCGTGGGCTACACGA ACGTCGGCAAGTCGTCGCTCTTGAATCAGTTGACGTTGTCTCATCACCGT GGGGGAGGTTTTGGCGGGCGGGGGGTGGGGGCGGCGGCAACGGGACGAGG AGGAGAAGGAGGAGTTTTTAATGCGGGTGGAGGCGGTTGGGGGGGTGGGC GTGGCAGGGGCATGGTACACGCACGCAATCGTGTGTTTGACACCTTGGAC CCTACCGTTCGTTCGGTGACACTGCCATCGCGTGCAAGGTGACGCCCTCA ACGAGATTGGCGTTGCAAAATTGGACTTGATCGTGTATACTTCTTGTTGT CTTCACATTAAAAGTCACCCATTCCACCCTACGAGACATGCAGTACCGTA CTCAGAGTCTGTGCTGGATCTTCCACCCTAAAAAGACACGAAATTCGGTG GTCACAGGCTAACATATCAAACAAATCGCCAAAAACATATAAAAAAGAAG AAAAATAAATGAAACAAAATAAAAGAGAGAGAAGAATAGAAAGAAAAAAG ATGGGAAGAACCAATAAAGAAGCGAGCAAAACATGCCACAGGACAGAGGC AGAACGAAGACAGAAAAAAATACTGTACTGTATATTGCCATGTGTTTATT TTGTCATCATGTCGATTATCGGATTCTCCTCGTGCCCGTAAGCTCTCGCC ATGAACGCCGCCCCACCCCTCTGCGCGCGCACTCGTGATTGATAGATCGG AGGTCCAAAAGGCATCGGCTTTTTTTTATCCCCAACCTCCCACCATACTC TGGGTATCGGGGACATGTTGTCGTCATCGGGGGTAAGCGCCTTACACGTA TCCCAACCGTCGGTATACACCTCTCCCTCTCACCTCAACCCCCCGCCCCC CCCGCCCCCGGGGTTATTGCATCATATACGCGAAAGGTGCGTGCTGGTGG ACACGGTTGGTTTCATTCAGGACTTGCCCACGGACTTGGTGCACTCCTTC CGCGCCACCCTTGAGGAGGTCCGACGCGCGGACGTCCTGCTGCACGTGCG CGATGCGAGCGTCGAGGCGCGAGTGTACGAGTCGCAGCGCGCGGCCGTGG AAGAGACTCTGGCAGAGCTTGGCGCCTTGGATGTTCCTACGCTCGAGGTG TGGAACAAGGTCGACAAAGAGGTGGTGGTTGCTGTACAGAGCGATGGCGA CAACATCAGTAGTAGTGGCGGCGAGCTAGCGGCCGACCGCGAAGAATTAG GGATTAATGGTAACGCAGAGGGTGGAGGGGCTGGAGGAGGAGACGGAAGG AGCAGGGGAACTGAACGGGGCGACATGAGTTACCCTGGCGATGAGGAAGA GAACGGCGGGCAGGAGTCAGTGGATTTGACTGATGGTCACAATAGCAACA TCATTTGTGGTGCGAACGGCGATAGCACCGACGACCAGCGGACACGAACG CGAGGGACTTTGCCGTCGGTTTTGGAAGCAGGGCCATCTGGCAAGAACGC CATCCGAGTGTCGGCGGTCACGGGGGAAGGGTTGGACATCCTCTTGGAGA AGGTCGACCGTTTGTTGCACCTGGGGGGCGGCAGCAGGTTCGCCTCGAAA CCACTGGACCGTTACCGGTATGTTCGAGTACTACCCGGCCAGACACAGCA ATGA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig100:550164..552667+

>mRNA_D-herbacea_F_contig100.231.1 ID=mRNA_D-herbacea_F_contig100.231.1|Name=mRNA_D-herbacea_F_contig100.231.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2646bp|location=Sequence derived from alignment at D-herbacea_F_contig100:550164..552667+ (Desmarestia herbacea DmunF female)
CAGGTGGTGCCCCTCCGTAGCGTGCACCCTAAGTTCCTGTTCGGCAGCGG
CAAGGCCGCCGAGATGTCGGGCGTTGTGAGCGCCGTCAACGCCGACACGG
TCTTCGTCAATGCGCCTTTGTCCGGCGCGCAGCAGAAGGGGCTCGCGGAG
AAGTGGCAGGGCGCGACTGTACTCGATCGATTTAGAGTTATCCTGGACAT
TTTCGCGGAGAGGGCTAGGACGACCGAGGCGAAGCTTCAGGCAAGGCCAG
GTGGTGCCCCTCCGTAGCGTGCACCCTAAGTTCCTGTTCGGCAGCGGCAA
GGCCGCCGAGATGTCGGGCGTTGTGAGCGCCGTCAACGCCGACACGGTCT
TCGTCAATGCGCCTTTGTCCGGCGCGCAGCAGAAGGGGCTCGCGGAGAAG
TGGCAGGGCGCGACTGTACTCGATCGATTTAGAGTTATCCTGGACATTTT
CGCGGAGAGGGCTAGGACGACCGAGGCGAAGCTTCAGGCAAGGCAACTGG
CTCGGCTAAAATACGAAGCAGCGCACCTCGTACAGTCCGGCGGCGCCAAT
AAGGGCCGCGACAGTGGGTACGACCGACAGCGCGGCGGTCTGGGGGCCGT
GGGAGGGTCCGGTGAAAAGGCTCTTGAGGCCCAAAGACGCCTCCTGCGTG
ACCGCACGGCCGAGGTAAACCGGCAACTCAAAGATGTAGAGCGTCGGCGT
GGTTTCCAGAGGGGCGCGCGCAACCGGAGACTGGAGCCGACCGTGGCGCT
CGTGGGCTACACGAACGTCGGCAAGTCGTCGCTCTTGAATCAGTTGACGT
TGTCTCATCACCGTGGGGGAGGTTTTGGCGGGCGGGGGGTGGGGGCGGCG
GCAACGGGACGAGGAGGAGAAGGAGGAGTTTTTAATGCGGGTGGAGGCGG
TTGGGGGGGTGGGCGTGGCAGGGGCATGGTACACGCACGCAATCGTGTGT
TTGACACCTTGGACCCTACCGTTCGTTCGGTGACACTGCCATCGCGTGCA
AGAACTGGCTCGGCTAAAATACGAAGCAGCGCACCTCGTACAGTCCGGCG
GCGCCAATAAGGGCCGCGACAGTGGGTACGACCGACAGCGCGGCGGTCTG
GGGGCCGTGGGAGGGTCCGGTGAAAAGGCTCTTGAGGCCCAAAGACGCCT
CCTGCGTGACCGCACGGCCGAGGTAAACCGGCAACTCAAAGATGTAGAGC
GTCGGCGTGGTTTCCAGAGGGGCGCGCGCAACCGGAGACTGGAGCCGACC
GTGGCGCTCGTGGGCTACACGAACGTCGGCAAGTCGTCGCTCTTGAATCA
GTTGACGTTGTCTCATCACCGTGGGGGAGGTTTTGGCGGGCGGGGGGTGG
GGGCGGCGGCAACGGGACGAGGAGGAGAAGGAGGAGTTTTTAATGCGGGT
GGAGGCGGTTGGGGGGGTGGGCGTGGCAGGGGCATGGTACACGCACGCAA
TCGTGTGTTTGACACCTTGGACCCTACCGTTCGTTCGGTGACACTGCCAT
CGCGTGCAAGGTGCGTGCTGGTGGACACGGTTGGTTTCATTCAGGACTTG
CCCACGGACTTGGTGCACTCCTTCCGCGCCACCCTTGAGGAGGTCCGACG
CGCGGACGTCCTGCTGCACGTGCGCGATGCGAGCGTCGAGGCGCGAGTGT
ACGAGTCGCAGCGCGCGGCCGTGGAAGAGACTCTGGCAGAGCTTGGCGCC
TTGGATGTTCCTACGCTCGAGGTGTGGAACAAGGTCGACAAAGAGGTGGT
GGTTGCTGTACAGAGCGATGGCGACAACATCAGTAGTAGTGGCGGCGAGC
TAGCGGCCGACCGCGAAGAATTAGGGATTAATGGTAACGCAGAGGGTGGA
GGGGCTGGAGGAGGAGACGGAAGGAGCAGGGGAACTGAACGGGGCGACAT
GAGTGCGTGCTGGTGGACACGGTTGGTTTCATTCAGGACTTGCCCACGGA
CTTGGTGCACTCCTTCCGCGCCACCCTTGAGGAGGTCCGACGCGCGGACG
TCCTGCTGCACGTGCGCGATGCGAGCGTCGAGGCGCGAGTGTACGAGTCG
CAGCGCGCGGCCGTGGAAGAGACTCTGGCAGAGCTTGGCGCCTTGGATGT
TCCTACGCTCGAGGTGTGGAACAAGGTCGACAAAGAGGTGGTGGTTGCTG
TACAGAGCGATGGCGACAACATCAGTAGTAGTGGCGGCGAGCTAGCGGCC
GACCGCGAAGAATTAGGGATTAATGGTAACGCAGAGGGTGGAGGGGCTGG
AGGAGGAGACGGAAGGAGCAGGGGAACTGAACGGGGCGACATGACAGGGC
CATCTGGCAAGAACGCCATCCGAGTGTCGGCGGTCACGGGGGAAGGGTTG
GACATCCTCTTGGAGAAGGTCGACCGTTTGTTGCACCTGGGGGGCGGCAG
CAGGTTCGCCTCGAAACCACTGGACCGTTACCGGTATGTTCGAGTACTAC
CCGGCCAGACACAGCAATGACAGGGCCATCTGGCAAGAACGCCATCCGAG
TGTCGGCGGTCACGGGGGAAGGGTTGGACATCCTCTTGGAGAAGGTCGAC
CGTTTGTTGCACCTGGGGGGCGGCAGCAGGTTCGCCTCGAAACCACTGGA
CCGTTACCGGTATGTTCGAGTACTACCCGGCCAGACACAGCAATGA
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