mRNA_D-herbacea_F_contig100.225.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig100.225.1
Unique NamemRNA_D-herbacea_F_contig100.225.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: D7FRZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRZ6_ECTSI)

HSP 1 Score: 665 bits (1716), Expect = 2.800e-232
Identity = 336/456 (73.68%), Postives = 380/456 (83.33%), Query Frame = 1 
Query:  364 MEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKALCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDYEFAMPVLVSTGEDGNRITISMPNGETEDLSTNRSEMDGSITVSDKDVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLRKSAEYQAAH 1731
            M  AWY +F+LIFIFALFI+PYTIFFYEEDDS ALTGRNDCKKALC+ATKYMV + VIVALV GILF VLGQSDVPV+D+EF MPVL+STG+ GNRI I   NG TEDL+ +RS +  +I  S+  VVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSF  RPQRLDRGQVA LE  IKRRCD+LVSVGEQ+KGVRQDTREAI+ G+LRF E+RRRNN  + EFN    AV +LE+D+  +  CKDY +KFNP+KP  WL+ GI  ++IA++WI+H              LN+YFLWFD+WFPLFGVLSVA+FS YLL ACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGII MC  PVIQFTVQA SAYLRNT+VT FFNVQVRYVRFFRYFF NN+F+ ALL L + S I+LS +PVD+PVSA+NIQETLRKSAEYQ+AH
Sbjct:    1 MAPAWYIVFMLIFIFALFIIPYTIFFYEEDDSLALTGRNDCKKALCSATKYMVGVVVIVALVSGILFVVLGQSDVPVRDFEFDMPVLLSTGDLGNRIDILQGNGVTEDLTVDRSVVSEAIIDSEDSVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFTTRPQRLDRGQVAVLEGGIKRRCDDLVSVGEQLKGVRQDTREAIEGGQLRFLERRRRNNNEAKEFNQFKQAVSLLEEDYPTLEFCKDYFQKFNPVKPFAWLLFGILASIIALVWIIHXXXXXXXXXXXXXXLNDYFLWFDKWFPLFGVLSVAVFSFYLLAACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIIFMCGTPVIQFTVQAFSAYLRNTDVTNFFNVQVRYVRFFRYFFENNVFIIALLILTVFSGIYLSCRPVDSPVSAQNIQETLRKSAEYQSAH 456
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: A0A835Z009_9STRA (LMBR1-like membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z009_9STRA)

HSP 1 Score: 542 bits (1396), Expect = 4.060e-183
Identity = 276/533 (51.78%), Postives = 369/533 (69.23%), Query Frame = 1 
Query:  151 ILILLAINVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKALCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDYE----FAMPVLVSTGEDGNRITISMPNGETEDLSTNRSEMDGSITVSDKDVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLRK----SAEYQA 1725
            I IL+A+N+Y++V+WQHPDDKN+AY+PKA+VLL LTLAE  ++ LP+D ANN GNV C+ +WS VFCGS+DM AAW  +F LIFIFA F++PYTIFFYEEDD+  L G+ +  K    ATKYM+ +A +VALV GI F  LG SD+PV+ Y      A   +           +S P      L+T +  +   +  + ++V L ++F +++MA+MSFVGW LF  F GLG+ GI ID +R + +RPQRLDR Q+A LEL  K    ELV +G  +K  R D +  +  G   +  KR+     S EF      VYILE+D+  MV+CK+Y+ K+NPLKP+ W++ GI +  I ++W++HM++YM+  P    FLN YF WFD+WFPLFG +S+ +F+MYLLVA VKGCFKFGLRL+WFTLHPMK N TYMNSFLFN GIILMC P VIQF+VQA SAYL + ++  FFNVQV+Y+RFFRYF+ N++FV+ALL + LLS  +L  +P D P S K ++E LRK    +A+Y+A
Sbjct:    6 IAILMAVNLYILVLWQHPDDKNQAYWPKALVLLGLTLAEGTVLFLPLDVANNGGNVDCNQSWSDVFCGSIDMTAAWSALFYLIFIFAFFLIPYTIFFYEEDDTEVLEGKFNFAKTFIIATKYMLVVAFLVALVVGISFYFLGISDIPVQQYAASTIHAYLYVQQYTTSSFMYCLSTP------LTTAQLALAPDVASTGQEVTLNVTFGLYLMAIMSFVGWFLFAVFAGLGMPGISIDLVRGYQHRPQRLDRAQIAALELRTK----ELVEIGTMLKSTRSDRK--LTRGN--YIAKRQAMRAESTEFKRFKQMVYILEEDYQQMVLCKEYSTKYNPLKPLFWMLVGIVSGCICVLWLIHMVVYMLATPPYALFLNAYFNWFDKWFPLFGAISIGLFAMYLLVAAVKGCFKFGLRLMWFTLHPMKLNETYMNSFLFNVGIILMCVPAVIQFSVQAFSAYLVSADINSFFNVQVKYLRFFRYFYVNDVFVFALLIITLLSTAFLGVRPSDTPASTKQVREALRKLGAHTADYEA 524
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: H6WB98_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB98_VAULI)

HSP 1 Score: 540 bits (1390), Expect = 2.940e-182
Identity = 264/516 (51.16%), Postives = 370/516 (71.71%), Query Frame = 1 
Query:  157 ILLAINVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKALCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDYEFAMPVLVSTGEDGNRITISMPNGETEDLSTNRSEMDGSITVSDKDVV-LQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETL 1701
            +L AIN Y++V+WQHPDDKNE+Y+ K +V++ LTLAE  ++ LP+D ANN GNVQC+  WSS FCGS+DM  AW  +F LI IF  F++P+TIFFYEEDD+  L G+ + KK L  ++KYM+A+ ++V+L+  + +  LG+S++PV +Y  ++  L+S        TI+ P+G +  L  +  ++  S+    +D + L +SF +F++A+++F+GW LF  F GLG+ GI ID IR F+NRP+RLDRGQ++ LE+ ++RRC ELV +G  +K  R  + +   +    +  K+ ++   + EFN     VY+LE+DFD  V+CK Y+ K+NPLKP+ WL  GI +A+I ++WI+HMILYM+I P    FLNEYF WFD+WFPLFG +SVAIFS YLL A +KGCFKFGLR+VWFTLHPMK N TYMNSFLFN GIIL+C P  IQF VQA S+Y  + E+    NVQVRY+RFF++F+ANN+FVYALL L +LS+I+L+ +P D+   AK ++ETL
Sbjct:    8 LLTAINTYIMVLWQHPDDKNESYWAKFLVVMGLTLAEGTLLFLPLDVANNGGNVQCNQFWSSTFCGSIDMHLAWTVLFYLILIFTFFLIPFTIFFYEEDDTLELEGQYNFKKTLIISSKYMLALVIMVSLILALTYLFLGKSELPVDEYRLSVGQLLSPEL---TFTINDPSGRSRPLVGD--QITKSLATKSQDTIRLNVSFGLFLLAILAFIGWFLFAAFAGLGIPGISIDLIREFLNRPKRLDRGQISALEMAVQRRCKELVEIGTMLKQKRAQSSQIRSN----YLSKQIKSRADNKEFNRFKQMVYVLEEDFDQFVLCKAYSTKYNPLKPIFWLCVGIVSAIIGLLWILHMILYMLIDPPATNFLNEYFNWFDQWFPLFGTVSVAIFSAYLLAAAIKGCFKFGLRIVWFTLHPMKINETYMNSFLFNVGIILLCVPAAIQFCVQAFSSYAVSAEINNILNVQVRYLRFFQFFYANNVFVYALLILTVLSSIYLAVRPSDSSNKAKIVRETL 514
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: A0A7S1XYX2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYX2_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 1.820e-132
Identity = 223/539 (41.37%), Postives = 343/539 (63.64%), Query Frame = 1 
Query:  118 DWFLYIVLFAAILILLAINVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKALCAATKYMVAIAVIVALVFGI-LFAVLGQSDVPVKDYEFAM----PVLVSTGEDGNRITISMPNGETEDLSTNRSEMDGSITVSDKDVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLRKSAEY 1719
            D+++ + L    ++LL  NVY+VV WQH DDKN+AY PKA+V+  L L E+ +++LP+D  N++G V C   W++  CG LDM  AW  ++  I + ++ + PY IF+YE DD     G +  K   C+A  Y   ++++VALV  + +F  L  +++PV+ Y   +     V V+    G+ +T +M    ++DL+   S    S T++     L +SFPV++MALM+FVG+  FV FGG+GL  +PID I  +V RP+R+D+ +    E  IK+R  +L+ +G+ +K  R +   A  S     +E+R+R  + +   N     V+ILEQD++ + +    ++ FNPL P   L+ G+ +A+++++W++ +IL++++ P    FLNEYF W+D+WFPLFG++SV IF+ YL+   VKGCFKFG+R     LHPMK NGTYMNSFLFN G++L+C+ PV+ F  +A + Y  +T+V   FNVQVRY+ FF  FF N +FVY LL LALLSA++L +KP D P SA  ++E L+++AEY
Sbjct:   76 DYYIIVFLLVMTIVLLIGNVYLVVEWQHTDDKNQAYAPKALVIFGLLLIEITLLLLPLDVQNSNGQVGCSQGWNNG-CGGLDMTLAWSIMYCTIAVMSVIVYPYAIFYYEADD-----GMDPSKSPACSAASYTF-LSLVVALVTTVCMFQFLATTEIPVETYSADIFDFQDVAVTASCIGDVVTCTMT--ASDDLTAASSYETSSDTLN-----LNVSFPVYLMALMAFVGYWFFVLFGGIGLAALPIDLILGYVYRPKRIDQKRFREEEKGIKKRSQDLIEIGQLLKKERTEFARAGHS----MWERRKRRQKDTITVNKFKQMVFILEQDYEQLKMSYANHKNFNPLVPYAMLLFGVISAILSLLWMLQIILFLLVDPPTTSFLNEYFAWYDKWFPLFGIISVCIFTFYLMACVVKGCFKFGVRCFCIELHPMKRNGTYMNSFLFNVGLLLICSLPVVHFATEAFADYAADTDVHNIFNVQVRYLIFFNEFFGNQVFVYMLLILALLSALYLLYKPKDAPASASKMKEILKRNAEY 596
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: A0A6U6IXR7_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IXR7_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 6.700e-124
Identity = 216/546 (39.56%), Postives = 327/546 (59.89%), Query Frame = 1 
Query:  118 DWFLYIVLFAAILILLAINVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKA---LCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDY---EFAMPVLVSTGEDGNRIT-ISMPNGETEDLSTNRSEMD-GSITVSDKDVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFFEKRRRNNRGSAEFN-----HISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMII----QPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLR 1704
            DWFL + +  A+LILL + VY++V + HP+DKNEAYFPK + L+   +A   +++LP+D AN  G   C G + + FCG L+M   W   + L+ I+   ++P++ F+YE DD   + G +   K    LC A KY + + +IV L F + +  L ++ +PV +Y   +FA    +      N    +S  + +  D+  +  ++  G+    +   VL  S   F   LM+++GW  F  FGG+GL  +P+D I  FVNRP+ +D  + A  E+ I+ R +ELV +GE IK + QD +E    G+  +F+ + R+ R  A+           AVY+LEQD +    C    + +NPL P   L+ G+ + V++I WI+H+ILY+I     +  V PFLN YF+WFD WFPLFGVLSVAIF++YL+   VKGCFKFGLR ++FTLHPMK NGTYM+SFLFN G++L+C  P++QF V A  +Y     V   F  Q+ Y++FF YF+ NN+FVY LLA ++L+A++L  +P D    +  +++ L+
Sbjct:    3 DWFLVLAIVVALLILLVVGVYLIVNYSHPEDKNEAYFPKLVTLMGFVIAGATVLLLPLDVANGEGYPGCAG-YDTKFCGGLNMTLFWDIFYWLVPIWVWIMIPFSTFYYEADDGMLMAGTSVGAKPNSRLCEAIKYQIMVLIIVGLFFALTYLFLNETAIPVMEYNGTDFAAAYQIQPYNQSNVSQFVSFSSSQLADMGPDDKKVILGTSDPFEGTEVLATSISTFFAGLMAWLGWFFFALFGGVGLASMPLDLILRFVNRPRHMDAVEFAEAEMSIRERVNELVDIGELIK-IDQDEKEN-SGGKGGWFKIKSRDERQEAKEEKKTLLQFKQAVYLLEQDVEDFKNCSSNYQSYNPLIPYAALIFGVISFVVSIFWILHIILYIIPLGLGKNPVTPFLNSYFMWFDGWFPLFGVLSVAIFTVYLMFCAVKGCFKFGLRFLFFTLHPMKVNGTYMSSFLFNTGLVLLCALPIVQFCVTAFDSYAIYATVNQVFGTQIHYLKFFNYFWTNNVFVYMLLAFSVLTALYLGCRPRDTSADSLELRDRLK 545
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: A0A7R9Y953_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y953_9STRA)

HSP 1 Score: 390 bits (1001), Expect = 6.950e-124
Identity = 203/516 (39.34%), Postives = 325/516 (62.98%), Query Frame = 1 
Query:  172 NVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKALCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDYEFAMP----VLVSTGEDGNRITISMPNGETEDLSTNRSEMDGSITVSDKDVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLRK 1707
            NVY++V WQHP DKN+AY PK + +  L L ++ I++LP+D  N+SG V C   ++S  CG L+M  AW+ ++ ++    + + P+ IF+YE DD     G    +  LC+A  Y      I  ++   +F  +G + +PV+++   +     V +++G   + +  +M N  T+D++ N      S + SD+ V L +SFPV+++ALM+FVG+  FV FGG+G+  +PID I S+V RP+R+D+ +    E  I++R  +L+ + + +K  R +  ++  S     +EKR+R  + +   N     VYILEQD++ + +    ++KFNPL P + L+AG+ + V +++WI+ +IL+++++P    FLNEYF W+D++FPLFG+LSVA+F++YL+ A VKGCFK G+R     LHPMK N TYMNSFLFN G++L+C+ PV+ F+ +A SAY  NT+    FN Q+RY+ FF YFFA  +F+Y  L L+ LS ++L +KP D P SA  ++  L +
Sbjct:   22 NVYLIVEWQHPADKNQAYAPKVLCVFGLLLIQITILLLPLDVQNSSGEVGCAQGFNSD-CGDLNMRLAWFILYCIMAFLVIIVFPFAIFYYEADD-----GLEKTRSPLCSAVTYTFFTLAIALVILLCMFFFIGITQIPVREHSVNLSAFQDVPITSGCLSDIVRCTMTN--TDDVTGN-----ASFSESDETVELPVSFPVYLIALMAFVGYFFFVIFGGVGMAALPIDLILSYVYRPKRIDQRRFREEEKGIQKRSKDLIEIAQLLKKERSEFAKSGHS----MWEKRKRRQQDTITINKFKQMVYILEQDYETLKLSFANHKKFNPLIPYMQLVAGVLSCVFSLLWILQIILFILVEPPATAFLNEYFEWYDQFFPLFGILSVALFALYLMCAVVKGCFKIGVRCFCIELHPMKYNATYMNSFLFNIGLLLLCSIPVVHFSTEAFSAYAANTDAANIFNGQIRYMVFFTYFFAEKVFIYIFLILSCLSLVYLLYKPRDTPASAVEMKAVLAR 520
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: A0A7S2XU32_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU32_9STRA)

HSP 1 Score: 379 bits (972), Expect = 3.070e-119
Identity = 216/554 (38.99%), Postives = 318/554 (57.40%), Query Frame = 1 
Query:  118 DWFLYIVLFAAILILLAINVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRN---DCKKALCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDYEFAMPVLVSTGEDGNRITISMPNGETEDLS------TNRSEMD-GSITVSDK--------DVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELR-------FFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLR 1704
            DWFL I   AA +ILL +  Y+++ + HPDDKN+AYFPKA+V+L   LA   +++LP+D ANN G   CDG + +  CG L+ME  W   F LI I+   ++P+  F+YE DD   + G +   + K  L  A  +   + ++V L   + +  L  SDVP++ Y       +    D N I    P     D S      T  + M    + V DK         +VLQ++   F+   M+FVGW  F  FGG+GL  +P+D I +FVNRP+ +D  + A  +  I+ R ++LV+VGE++K +  D +E    GE +       F   + R  +     N    AV++LE+D +    C     K NPL P   L+ GI   +I++ W+V + +Y++ +  + PFLN YF WFD WFPLFGVL+VAIF+ YLL   +KGCFKFGLR ++FTLHPM+ N TYM+SF+FN G++L+C  PV+QF   A + Y R   V   F  Q++Y++FFRYF+ NNIFVY LLA   L+ ++L+ KP D   +A ++++ L+
Sbjct:    2 DWFLIIATLAAFIILLVVGFYILIYYSHPDDKNDAYFPKAVVVLGFVLAGGTVLLLPLDVANNEGYPGCDG-FDTEICGGLNMELFWNIFFWLIPIWVFLLIPFMTFYYEADDGMLMAGTSIGGEYKSKLRTAVVWEGGVLIVVGLSMALCYLFLSNSDVPIRQYNGTSISNILVQVDPNPIYQVAPQFNETDSSLLPFQPTQIAPMGTADVGVLDKVQKNDELESIVLQVNIGTFLAGFMAFVGWFFFAVFGGIGLAALPLDLILTFVNRPRHMDAVEFAEAQQSIRERVNDLVTVGEELK-LETDGKEGEGEGEKKKGWFGGGFGGGQTREEKKI--MNEFRRAVFLLEKDVEDFQNCSANYNKTNPLIPFAALLFGIFAIIISVCWVVQIAIYVLPEEPIHPFLNTYFAWFDNWFPLFGVLTVAIFATYLLFCAIKGCFKFGLRFLFFTLHPMEVNKTYMSSFMFNIGLVLLCALPVVQFCSTAFADYARYATVQQVFGTQIQYLQFFRYFWTNNIFVYILLAFTALTILYLTCKPRDRSTNAIDLRDRLK 551
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: W7U3J0_9STRA (Lmbr1-like conserved region-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3J0_9STRA)

HSP 1 Score: 375 bits (964), Expect = 1.840e-118
Identity = 209/532 (39.29%), Postives = 316/532 (59.40%), Query Frame = 1 
Query:  118 DWFLYIVLFAAILILLAINVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKALCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDYEFAMPVLVSTGEDGNRITISMPNGETEDLSTNRSEMDGSITVSD--KDVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLRK 1707
             WFL + +   I++LLAINVY++V W HPDDKNEAYFPKA+V+  L LAE  ++ +P+D ANNS N+ C   W    CG LDM   W  +++LI +  + I+P+ IF+YE+DD     G+    +A C A KY        ALV G+ +  +G+  +PV +   ++  L          ++  P   T  L ++   + G++        +  Q +F V+++AL+SFVGW LF  FGG+GL  +P+D I +F  RP+ +   ++A  +L+++ R  +L+ VG  ++  R+D R    +   R   +R   N            VY+LE D++     KD   K+NPL P+  L+ G+  +++ ++W++H+I+YM   P +  FLN+YF+ FDEWFPLFGV+SVAIF +YLL   V G FK G+R +   LHPMK NGTYMNSFLFN  +IL+CT PV++F+  A + Y R + +  FF VQ+RY+ FF  F+ NNIFVY LL    L+ ++    P D PV A+ ++++LR+
Sbjct:    4 SWFLLLCIGVMIVVLLAINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAEACVLAVPLDVANNSSNIGCTQGWVQS-CGGLDMSLFWQIMYVLITVLCVAILPFAIFYYEDDDGLT-EGKG---QAFCGAVKYTAVCLFASALVVGLCYFFIGRVRLPVLEVPASVVDLTVH-------SLGTPRNAT--LDSSEIALAGALMKDSFRTKISFQSTFIVYMIALVSFVGWFLFAIFGGVGLAALPMDLITAFTTRPKPMPAEELAHEQLLLQARVADLIEVGHLVQSERKDRRSKGGNFLARTVAERSERN----TLLKFKQMVYMLESDYEKFRAAKDMG-KYNPLWPIGMLLLGMLASILTVMWVLHVIVYMFFFPPLSQFLNQYFIQFDEWFPLFGVVSVAIFVLYLLFCVVAGNFKLGVRFLCVELHPMKINGTYMNSFLFNLILILLCTFPVVEFSTSAFAGYARFSNIYHFFGVQIRYLIFFSIFYTNNIFVYMLLGFCFLATLYFIKTPRDKPVEAEEVKQSLRR 516
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: A0A6G0X0P3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0P3_9STRA)

HSP 1 Score: 371 bits (952), Expect = 1.650e-116
Identity = 207/544 (38.05%), Postives = 321/544 (59.01%), Query Frame = 1 
Query:  118 DWFLYIVLFAAILILLAINVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKALCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDYEFAMPVLVSTGEDGNRITISMPNGETEDLSTNRSEMDGSITVSDK--------------DVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLRK 1707
            +WFL +V+        A NVY++V +QHPDDKN AY PK +V+  L LAE  +++LP+D ANNS  + C   W+S  CG+LDME  W  +F+ I +F + ++PY+I+FYE DD F ++G+   +     A K  +A  V+V +V  I +     SD+P         VLV      N  TI +       L    S +DG++  S++               + + +S PV++ AL+SFVGW  F  F G+GLV +P+D I ++  RP+ +     A  +++I+ R  EL+ VG++IK        A    ++   E+R+     +   N    AVY+LE+D   + +C +  + FNPL PV  L+ G+   +I+I+WI+ +I+ M+      PFLN+YF+WFD+WFPLFG +SV IF+MYLL+AC+KGCFKFG+R     LHPM+ NGTYMNSFLFN  +IL+C  PV+QF+ QA + Y+R T +     +Q++Y++ F +F+ +N+F+YA+L + LL+ ++L+ +P D       I++ + K
Sbjct:    3 NWFLVVVVVVMTFAFAAANVYILVYFQHPDDKNTAYMPKLLVVFGLLLAEACVLLLPLDVANNSTAIGCTAGWNSA-CGNLDMETLWLIVFMAIAVFLVVLLPYSIYFYESDDDFEVSGKRAHR--WLDALKLEIATLVVVGIVIAITYVTSSTSDIPYT-------VLVVNTTSAND-TIQIAGANAMGL---HSYIDGALISSEERSAALVNGLNPITTSMRISVSVPVYITALVSFVGWFAFSIFVGVGLVAMPLDLILAYFFRPKFIPADIYAQQKMLIQIRSLELIEVGKEIK----TNMLAPPDAKMSARERRKHGKLDTITMNKFKQAVYLLEKDVAELKLCHEDYKNFNPLVPVGKLILGVFAGIISILWILQIIVGMLPXXXXXPFLNDYFMWFDKWFPLFGTVSVGIFTMYLLMACIKGCFKFGMRCFCCALHPMEYNGTYMNSFLFNLALILLCCIPVVQFSNQAFNDYVRLTTIQTLMGIQLKYMKGFSFFWVHNVFLYAILIIVLLTTLYLAVRPRDTSSKTDAIRKKIEK 528
[Close]
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Match: A0A7S4SSD3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SSD3_9STRA)

HSP 1 Score: 371 bits (953), Expect = 1.800e-116
Identity = 210/544 (38.60%), Postives = 316/544 (58.09%), Query Frame = 1 
Query:  118 DWFLYIVLFAAILILLAINVYVVVIWQHPDDKNEAYFPKAIVLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIFLLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKA---LCAATKYMVAIAVIVALVFGILFAVLGQSDVPVKDYE----FAMPVL--VSTGEDGNRITISMPNGETEDLST--NRSEMDGSITVSDKDVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVGIPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTREAIDSGELRFF---EKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRKFNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDEWFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFT-LHPMKPNGTYMNSFLFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFANNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLR 1704
            D FL +      LIL+   +Y++V +QHPDDK +A+ PK IV+    +A   +++LP+D ANN G   CDG + +  CG L+M+  W   + L+ I+   ++P+  F+YE DD   + G +   K    LC A KY +A  +I  L+F + F  L ++D+PV++Y     F    +  V    D N   +   + + ED+ +  + S  D S   +   + LQL+   F    M+FVGW  FV FGG+GL  +P+D + SFVNRP+ +D  + A  ++ ++ R +ELV +GE IK                 +   E RR+ +           AV++LEQD +    C     K+NPL P   L+ GI  A+++  WI+H+IL+++  P + PFLN YF WFD WFPLFGVLSV +FS YLL   VKGCFKFGLR      LHPMK   TYM+SFLFN  +IL+C+ PV+QF+  A + Y RNT V   F  Q+RY++FFR+F+ NN+FVY+L+ LA+L++++L+ +P D+  ++  +++ LR
Sbjct:    3 DVFLIVATVVVFLILIVAGLYLLVYFQHPDDKWDAWGPKIIVISGFIIACATVLLLPLDVANNEGYAGCDG-YDTRLCGGLNMDLFWDIFYWLVPIYVFLLIPFFTFYYEADDGMLMAGTSVGTKPNNRLCEALKYQIATTIIFGLIFALCFIFLNETDIPVREYSVQGGFGKGAVYQVVPRTDNNGTILPFTSDQFEDMGSPDSASLSDVSRDPNLGSIQLQLNISTFFAGFMAFVGWFFFVLFGGIGLSALPLDLVLSFVNRPRHMDAVEFAEAQIALRERVNELVDLGELIKLEEXXXXXXXXXXXXXXWFNREARRKAHEDRKTVLQFKQAVFLLEQDVEDFQNCSANYTKYNPLIPWFSLLFGICGAIVSFFWILHIILFVLPDPPIVPFLNNYFQWFDGWFPLFGVLSVLVFSFYLLCCAVKGCFKFGLRFPGIIHLHPMKRGKTYMSSFLFNISLILLCSLPVVQFSTDAFADYARNTTVYQVFGTQIRYLKFFRWFWINNVFVYSLVILAMLTSLFLACRPRDSSANSLELRDRLR 545
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRZ6_ECTSI2.800e-23273.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z009_9STRA4.060e-18351.78LMBR1-like membrane protein n=1 Tax=Tribonema minu... [more]
H6WB98_VAULI2.940e-18251.16Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A7S1XYX2_9STRA1.820e-13241.37Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6U6IXR7_9STRA6.700e-12439.56Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7R9Y953_9STRA6.950e-12439.34Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XU32_9STRA3.070e-11938.99Hypothetical protein n=1 Tax=Attheya septentrional... [more]
W7U3J0_9STRA1.840e-11839.29Lmbr1-like conserved region-containing protein n=2... [more]
A0A6G0X0P3_9STRA1.650e-11638.05Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S4SSD3_9STRA1.800e-11638.60Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:461670..475814 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score666.0
Seed ortholog evalue1.6e-188
Seed eggNOG ortholog2880.D7FRZ6
KEGG koko:K14617
KEGG Pathwayko04977,map04977
Hectar predicted targeting categorysignal anchor
GOsGO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0044464,GO:0055044,GO:0071944
EggNOG free text desc.LMBR1-like membrane protein
EggNOG OGs28H7Y@1,2QPKQ@2759
Ec32 ortholog descriptionLMBR1-like membrane protein
Ec32 orthologEc-12_007050.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons12
Model size2273
Cds size1713
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.225.1prot_D-herbacea_F_contig100.225.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig100 462140..475724 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927414.692987-UTR-D-herbacea_F_contig100:461669..4621391622927414.692987-UTR-D-herbacea_F_contig100:461669..462139Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 461670..462139 -
1690790158.1505744-UTR-D-herbacea_F_contig100:461669..4621391690790158.1505744-UTR-D-herbacea_F_contig100:461669..462139Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 461670..462139 -
1622927415.0316854-UTR-D-herbacea_F_contig100:475724..4758141622927415.0316854-UTR-D-herbacea_F_contig100:475724..475814Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 475725..475814 -
1690790158.2765975-UTR-D-herbacea_F_contig100:475724..4758141690790158.2765975-UTR-D-herbacea_F_contig100:475724..475814Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 475725..475814 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927414.7072995-CDS-D-herbacea_F_contig100:462139..4622951622927414.7072995-CDS-D-herbacea_F_contig100:462139..462295Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 462140..462295 -
1690790158.1604233-CDS-D-herbacea_F_contig100:462139..4622951690790158.1604233-CDS-D-herbacea_F_contig100:462139..462295Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 462140..462295 -
1622927414.9137142-CDS-D-herbacea_F_contig100:462854..4629471622927414.9137142-CDS-D-herbacea_F_contig100:462854..462947Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 462855..462947 -
1690790158.1702814-CDS-D-herbacea_F_contig100:462854..4629471690790158.1702814-CDS-D-herbacea_F_contig100:462854..462947Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 462855..462947 -
1622927414.9250457-CDS-D-herbacea_F_contig100:463357..4634571622927414.9250457-CDS-D-herbacea_F_contig100:463357..463457Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 463358..463457 -
1690790158.1782398-CDS-D-herbacea_F_contig100:463357..4634571690790158.1782398-CDS-D-herbacea_F_contig100:463357..463457Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 463358..463457 -
1622927414.9387147-CDS-D-herbacea_F_contig100:463946..4642611622927414.9387147-CDS-D-herbacea_F_contig100:463946..464261Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 463947..464261 -
1690790158.1860995-CDS-D-herbacea_F_contig100:463946..4642611690790158.1860995-CDS-D-herbacea_F_contig100:463946..464261Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 463947..464261 -
1622927414.9485192-CDS-D-herbacea_F_contig100:465322..4653841622927414.9485192-CDS-D-herbacea_F_contig100:465322..465384Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 465323..465384 -
1690790158.1939728-CDS-D-herbacea_F_contig100:465322..4653841690790158.1939728-CDS-D-herbacea_F_contig100:465322..465384Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 465323..465384 -
1622927414.9610245-CDS-D-herbacea_F_contig100:466145..4661551622927414.9610245-CDS-D-herbacea_F_contig100:466145..466155Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 466146..466155 -
1690790158.201515-CDS-D-herbacea_F_contig100:466145..4661551690790158.201515-CDS-D-herbacea_F_contig100:466145..466155Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 466146..466155 -
1622927414.9701157-CDS-D-herbacea_F_contig100:466344..4665501622927414.9701157-CDS-D-herbacea_F_contig100:466344..466550Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 466345..466550 -
1690790158.2118871-CDS-D-herbacea_F_contig100:466344..4665501690790158.2118871-CDS-D-herbacea_F_contig100:466344..466550Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 466345..466550 -
1622927414.9781718-CDS-D-herbacea_F_contig100:467282..4673901622927414.9781718-CDS-D-herbacea_F_contig100:467282..467390Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 467283..467390 -
1690790158.225513-CDS-D-herbacea_F_contig100:467282..4673901690790158.225513-CDS-D-herbacea_F_contig100:467282..467390Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 467283..467390 -
1622927414.9893858-CDS-D-herbacea_F_contig100:467903..4680501622927414.9893858-CDS-D-herbacea_F_contig100:467903..468050Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 467904..468050 -
1690790158.234773-CDS-D-herbacea_F_contig100:467903..4680501690790158.234773-CDS-D-herbacea_F_contig100:467903..468050Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 467904..468050 -
1622927415.003079-CDS-D-herbacea_F_contig100:468637..4687731622927415.003079-CDS-D-herbacea_F_contig100:468637..468773Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 468638..468773 -
1690790158.2431479-CDS-D-herbacea_F_contig100:468637..4687731690790158.2431479-CDS-D-herbacea_F_contig100:468637..468773Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 468638..468773 -
1622927415.0125115-CDS-D-herbacea_F_contig100:469358..4695851622927415.0125115-CDS-D-herbacea_F_contig100:469358..469585Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 469359..469585 -
1690790158.2528458-CDS-D-herbacea_F_contig100:469358..4695851690790158.2528458-CDS-D-herbacea_F_contig100:469358..469585Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 469359..469585 -
1622927415.0224838-CDS-D-herbacea_F_contig100:475571..4757241622927415.0224838-CDS-D-herbacea_F_contig100:475571..475724Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 475572..475724 -
1690790158.2694883-CDS-D-herbacea_F_contig100:475571..4757241690790158.2694883-CDS-D-herbacea_F_contig100:475571..475724Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 475572..475724 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig100.225.1

>prot_D-herbacea_F_contig100.225.1 ID=prot_D-herbacea_F_contig100.225.1|Name=mRNA_D-herbacea_F_contig100.225.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=571bp
MAAGFLIEADWFLYIVLFAAILILLAINVYVVVIWQHPDDKNEAYFPKAI
VLLSLTLAELAIIMLPIDAANNSGNVQCDGTWSSVFCGSLDMEAAWYTIF
LLIFIFALFIVPYTIFFYEEDDSFALTGRNDCKKALCAATKYMVAIAVIV
ALVFGILFAVLGQSDVPVKDYEFAMPVLVSTGEDGNRITISMPNGETEDL
STNRSEMDGSITVSDKDVVLQLSFPVFVMALMSFVGWILFVFFGGLGLVG
IPIDSIRSFVNRPQRLDRGQVATLELMIKRRCDELVSVGEQIKGVRQDTR
EAIDSGELRFFEKRRRNNRGSAEFNHISDAVYILEQDFDVMVICKDYNRK
FNPLKPVLWLMAGIATAVIAIIWIVHMILYMIIQPAVDPFLNEYFLWFDE
WFPLFGVLSVAIFSMYLLVACVKGCFKFGLRLVWFTLHPMKPNGTYMNSF
LFNCGIILMCTPPVIQFTVQALSAYLRNTEVTGFFNVQVRYVRFFRYFFA
NNIFVYALLALALLSAIWLSFKPVDNPVSAKNIQETLRKSAEYQAAHPPA
PSASANGTAVTGDGMAFNAQ*
back to top

mRNA from alignment at D-herbacea_F_contig100:461670..475814-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig100.225.1 ID=mRNA_D-herbacea_F_contig100.225.1|Name=mRNA_D-herbacea_F_contig100.225.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=14145bp|location=Sequence derived from alignment at D-herbacea_F_contig100:461670..475814- (Desmarestia herbacea DmunF female)
AGAAGACTTTCAGGGAGTAAAACACGCAGGGAAGGCTTTTGGTACTGGAA
GGGGAACTGGGGGGGGTGCCAACGCATCTGTCTTTGAACGATGGCAGCGG
GATTCCTTATCGAGGCCGACTGGTTTCTTTACATTGTGCTCTTCGCTGCC
ATCTTAATTCTGCTCGCGATAAATGTCTACGTCGTGGTGATCTGGCAGCA
TCCGGACGACAAGAATGAGGCCTACTTCCCGAAGGCTATTGTGGTAAGCC
TCTTTCTGCTTCCCCAGGCGTTTATTGTTGAACTGCATGTAGCGTTGGCC
CGATACGATTGGCTTTTCTCCATTTGGAAATATGGGTCTGAAACTTTGGT
GTGTACCGAGCAGAGGTTGTTTTTGTTTTGTTTGGCAGCACTCGTTTTGC
TGGGATGTCAGAGAGGCCAACTGCGTGAAGAAGACGCCAAAGGCTCGGGT
TGGTGTTCGGTCGATTGTTTGTTGCCTAAATCTTGTGTCTCGATGCTGTC
CTCAGCATATGGAGTCAGCGTATATGGAGATGGAGCTATTCGTGATTTGT
GATGCTGCGAGTGAAATCACAAGTGCATATGTGACCAACTGACCATGCTG
TTTTGTTTTTGTTCTACGAGCACCTTCTGTACGATAGTAGCATACGGTAC
AGGGTAGAGAATTATCTCGTCGCAACAGAAAACCTGTACCATACTCGTAC
ACTCGTATCATACGCCTGTACTCGTACGACTTACAACAACAGTATGAGTA
CGAGGTAGTAGTATAGCTACTACTACTGTTGTCTGTTGTAGTATGATTTA
TCTGCGCTTGTGGAAGTTGCCTTGCTTGTGCTTATCTTCTGTTTGCTACA
GTAGGTCGAATGAGGGCATGAGTACAGTTGTAATTAATGTGTAATGCGTC
TGGGTTTAGTTCAGGAGGCTATGATACTCACGGTCCTTTTATTTCCGTTT
TCTTTATCGTTATTAATATTAATAGTACCCGTACATACTTCGTATGATAC
TACTGTACAGTACCGATATCATAATCAGTAATGGCGTACCTGGTATACGA
GTACAAGTCAATAGTACCAGTATTATAATAGCCAAACCACGGCGTTGCCG
GGTGCAATGTGCGCTCGTAGTTTGAGTGAAACCTACCTCAACCCCAACCC
AACCCAACCCAACCCCAACTCAGGCCCCAACTCAGGCCCCAACTCCGACC
TCAACCCCTCCGAAAACTGCACCGAATAGCACATACCTGGCTGGTACAAA
TTTCTACAACACTGCTGACTGATAGATATTGCAACACACACAAGAGACAG
ACGGAACCTCGCCCAACACCCAAACAACACCAAGAACGAAAAACAAGAGT
GCGCTTCATACAGTTGTGTGTGAGTGCGAGGAGCGTTTGCTGCGTGTGTG
TGTTTTGCGCGTAAAAAGTTTAAAAGTTTGAAATAATAAATCATAATCTG
GTTGCACATCATCAACAACAGACAGCGAGGAGAAAAACAATAAAGACGCT
GTTGCGGCAGCACGAAAAAAACGTATTAAATTTTACCACGTACGTGGTAT
GTTACTTCAGGAAGAAGCGGCAAATATGCAGACGGATATGCTTTTGAGAA
AAGTAGATCTCTTTGGTTGCACCGCGCTGCACCGCACCATGCCTCAGAGA
TGGAGCATGATGTGTCGTTTTGCTTTTTTTGGAACACGTGCTTGCTCACG
CACAGAGGAGGCTGGCTGTCCCTCGCTGCTACAACCGTGCAGTGGATATA
TGATGGTGGTGTTAGGCCACGCGTGGGTTAGCTGTCTTTTGGTGATGGTG
TGGTGATATCTGCTACTACTGTACGTGGAGTTTGATTGCGCGGGCTTCGC
CAGCTCGATTTTTATAAAACCGTGTTGCTCTGGCGACGGCTTTCATTTTG
GATGTCCCAACGTGTGTTTGTTTGGCCGTATGTATCCTGGAGATTGGCTT
CGACTTCGAAATTGATTTTTGCTTAGAGGGGTGTCTCTCTTCCAAACCCA
CTGTCCTTTTCGAGGTGCTTGTACAAGTACAAGGCCCGTTTTTTCAAGTT
CGGGGAGGCACTCTTTTGAGACGAGCATACCATCCTCCGTCGGTCGCTTC
TCGCAGTGTCGCACCCGTGGTGGTCCGAATTTTTCCCCGTTCTACCCTCT
ATTCGGGATTGCATCCCCCGCTTGCAAATTTGTGCTCTCCTCTCACATTT
TCCACGCTTGAGCGACGGCGACCGACGTGTGTGCAGGCAGTGTCACACCA
TCCCCGTGCGTGTGATTGCACCGTGGCGGCGGTGGGATATCTGTTTCTGC
TGCCTCAAGGACGATGTTGGTGAACACCTCAACCCCCCCCCCCTCAAACG
GTGCTGTAAAACCAGTCGGGTTGTTCGGCGAGGTCGGAGATGGTGTGTTC
GTATTTAGATAATTAATAATCGTTGGGCTGGTACGTAAAACACTTGGTCA
AATGCTCGTACGCGAGTGTTGCCTTATTGTACGTTAACATACGTGTGATG
GTCGATTGTCAAACCCACTCTCTCTTGAGAGTTGTGTTTTTGGGGGCACA
GGAACTTCTGTGGATCGAATCGTGGTAAAAGTCTTTTTTTTTCGTGTGCC
GTCCATCTCCTTCCGTCGTGCAAGCACGAACGCCTGGGTATGCAAACTCG
ATAAAAGTCGACGAGCTTTGGGAATGCCGAAACCTGAACTGAAAACACCT
GTGACCACAGCTTGCTCAGAATGCATCTGAGTCATGAATTCTTGTGAGCA
GAGAGCTGGGAAGTAAACGCGATGGACTACACAAAGAATACAACGACAAA
AAATCTCCAAAACTGTTGATAGTTGTACGAATACACATGTAATAAGAGTA
ATAAACATATATACGATGATGTTGATGCCCTAACGGCGAAGCACCCTTTT
TCCTTGTCTTGCGTGCAGTATGTGATTTCTTCCATCCCGGTTATCTCGAC
CGCCCATACACCTTAGAGTGCGCTTCTTTGCGGGACGCTGTTGCCTACCC
TCCCGTAAGAGGCTCAGCCGCATGCGCGACCCCGCGTGCCAAGCTGGCCG
CGCCAGCCGCCGCGACAGAGTGCGAATAACTCCTTCCCGAGGCGTTCTTT
GTTCTTTTAAGAATGCGAAGTACGTACCTGCATACCCATAGCTGCACCAG
AGTAGCAACAGCTGTAATACAGTACTACAGTAGCACACTACCCGCATCAG
CTATTCTACCCAGCTCCATCACGTCCAAGCTGGCATATCCATCTCGAGTG
TGGCCGACTGGCAGCTCCTTGTGCAGCAGTCTCCGTCTCACACTGTCGTT
GTGTCGCAGAATGGGCCGTGCTGCTGTCCTTTGCGCACTGAAGTTGCACC
ACGAAAGGGCATCATGGTATCATCAGAATCATGACGCAACAACAGTGCGT
CTTCTTGCAACGCACAAGCCGTGACAGTAGTGACCGAATTTAAACGCTGA
CGTACCCATGTTTTTAAGCTACTTTCGTTGCTTCTGTTTTGCGACATCAA
TGGCCGCGTCTTTGCTTATTGTGGAATAAACCAACCACAAAAAAAGGCAA
AAACAAAACAAAACAAAACAAAAAAACGAGTTTTTTTTTTTTTTCTATAT
GCATCGCTTTTACTTTTTTCCAGTCCGCAGCTCGCAGGAGCTCTTTTACT
GTTGTATTCATCGCTGCGCGCCTGCCTGAGCTAGCCGTGGTCGCAGGTGT
CTACCCTTCTTCCCCCCGGAACATATACCTCGGTTTTTTTCTCGCACAGG
GTTCGTTATTATTTGCATAGCTCGTCGACTTTCATTGAATTATGTTGAGC
TTGCTTGCGCCCTCGCGCTTTCCGCCATGGAGGATTGAGATGGCGCCGAA
AAATTAAAAAAAAAAAAAAAAAAAAAAATTGTTTCCACTGGGAATCGAAC
CCAGAACTTCGAACAACAGGGGCGACAATCTACCCACTTAGGCCACAGCG
TCATCCCTACGACTAATTTATGACGAATATTTACTGTTGTCTGTTGCACG
TGCTCTTCTCTTTGTTTGGTTTTGAGTTTGAACCTTGTTGGTGTCAAGTC
TTTTTTTTTCTTATACGACAAAGGCCCTTATTTTTCTTTTACCAGTACAA
TTTATTTATTTATTTCGTCGACAACTTGTAACTTGCAACGCCCTGCACGG
CGTACAATGTGCTGCAGGGAATGAGGTTCGGTTTCTGCCAGCACCCCATT
CTCTTCTGCTACTTTATAGCTCGAGTATCGTTTTTAATACTTCCCCCTAA
ATGCCCACTACCGTACCTCGAACAATCCATATTAAATATTAACAAACTTG
GCGTTATTATTTAACTTACGAAAACATCAGCCGTGACGTTCCAAACTGGT
TCGGGGGCCAGGGGATAATCGTCAACCTCACTGTGTGATACACCGGTCCT
CAGATGAGTTATAACGCAGTGACTCCCCTGGGGTGTCCCAGGCTCTACAG
GATAATTTTGGGAAACAGGCCCCCTTATCGTGTGCACTGGATCATAATCT
TTCGGAGGGGGACGGGAAGTAACTGTGCATGTGTGGCGTTTTCACATCAT
GTGTACGTACCTAAACCTATACTATGCGAATTCACACTCACTACGCACAC
TAGATACGAAGGCAACGACGTTATCGGTATCACCAATACACCAATTTTAT
GTACGGTGACATGAGTCACGAAACAGGAGCAAAATCACAACCAAAAACTC
AACATTGAGTGATGTGTACACATATCACACGATATGGTGAACATCAACAC
CATAGGTAGGAGGCATTATATGATATTTTCACGACAACTGTGTACTACAA
ACGATTCCTTCACTATGATAATTACTAATTACAACACTATCCCCCTCTGA
ACCACGACGAGAAAACCTTCCCGGAGCACTCGGGCCGGCTGCCGCCGGCC
CGAGTGCGTAGCCCTTGTATTAACTAGTTTGACAGGGTTGTCGTGACGTC
ACCACACCAGTTGGCAGCAACGGCTCAAACTGCTATATGCAAACATGCAA
ACCCATTTACTTGCGCCGTTCGACATCCTTTTTTGTTGCGACGTGTGGAA
AACGCGCTTGAAAACTGCGCATGTGCGTTTTTGTGGAACAACGGCACGAA
CTGACAGTAGTAGTGCTGTATGCGGTTGCGGAAAAGTACGAGCACTACTG
TTAACATCAAACTTGCTGTTATTAATAGTGTGGTTTGCTCATTGGTGGGA
ACTGTAGTTGAACCGTTTTTGTGTATTTTCGTCGTCATTTTTCGGGAGCT
TGGCACTGCCGAACTTTCCATTATTGAACGCTCTCTTGGCGAGCCCACCT
ATTGTTGCGCTACCCGCAACGTGACTCCTCCGTTTTGTACTCTAACCCAT
GCATGCATGCATCATACCATTTTGCGTTTCGTTTTTTTGTTCCCTGCAGG
CTTTTGTTGTTTTTGTTGTTATTGCTGATGTGGCGTTCTCGATTATCGTC
TCCTACGAAAGTGAAAATTAATGAATGTCTTGAATTATTAATAGTATCAA
ATTATTATTTTTTTGGCGTTTCATACTATTAATAGAATTCCTACCTACTA
ACTACTGCCACCACTACTATTACACAACAACTATACCGCTACAGTATATA
AACCTATCTATCACGAGGGCCCCTAATAAATAGGCCCAAAACGCTTTTTT
CGACGTGTGTATCGCGAGACAGACAGACGCGGCGTGAATCACGGATCTCG
TTCGTTTGTATCATGCAGTGCCGCAGTAGACTTATCAACGATGCTACATT
TTCATTTTTCGGGGGTGGGGGTCCGGAGTAAGGACACTTGCGCTCGCCCT
TTGTCGCCTTGTTTTGGGCCTATTTGTTACAATGGTTGATAGGGGCCTGC
CTCTCTCATACTAACTTATTTTTCCATGTGCTGCTGCTAAAATATGTTTC
CCTGTTTGCGGCTTGCTTTTCCCTCTTTCTATCTCCTGTGCCGATCGTTC
ATGATCTAGTTAACTCATTTTGCTGCGCTCAATGATCTCTCGCATACTTT
TTGGTTTCGGTGATGATTCGGTGACCGGTTCCAACACTCTTTTCGTTCGT
GGTTTCCAACAAGGCAGGACATTTTTGTGGAATGTTGACGTATATTGTTG
CGCGTGCACTACTACTAACGGTCGTGATACGACGAGCCAGACAATTTTCG
TAGCGCGCGCACGTTTCAGAGGTCGATTTTCTGACCCCTCTAGTGGCCCC
GAAAAAACTCCCGACGTCTTGTTTCGCAGCTGTTATCGCTCACATTGGCG
GAGCTTGCTATTATAATGCTGCCCATTGACGCGGCGAACAACTCGGGTAA
CGTGCAATGCGACGGGACATGGAGCAGCGTGTTCTGCGGCTCCTTAGACA
TGGAAGCGGCGTGGTACACCATATTTTTGCTCATCTTCATATTTGCGCTG
TTTATCGTGCCCTACACCATTTTCTTCTACGAGGAGGACGATTCCTTCGC
TCTCACGTGAGTCTCGTATATCGTGAGAATGATGCAGCGGCGTTGGCTTC
GACTTAGCTTCGATTTGACTTTTTTTTTTTACATGGGACAGCTGTCTCTG
TGTGTGTTGTAACGCGGTACGTTCGTTTTGTTTTGCTTGCGTGATGCGCC
GTGTACCGGATGCTTGACTTTTGGCTCGCGCCCACTTACTGTAGTGTTTT
GTGTGTGGTGTTTGTGTTGAAACGGGGTTCGATCGTCGTCTTCTTTGTGA
TAAAGAGCACGTGTTATTTTCTTGAAAGGATGGTTGTGTTTCAAATCTTG
ACCCGCGGCAAGCGTTGTAGTTTGCAACCAACCCCTAGTAAGAATACGTG
TTGTGAGCCTCGAATTGGCAGAAAGATAGGAGCACTTGACCTTTGGCGGG
GTGCTCCTGTAGGAACAATGCTCCGTCTCCGCTTGTACGATTGCGTCAAT
TAATTGGTTTATGGCCGAGGTGTACAAAACCCTTGTACCCTGCCCTTCCC
TACCGCTTATCCCTTCTTCCTTGTCCCTCCGCCCTTCCCTCACTGGCACC
CTCGTCGTTGGAATAATGGGCGCAACGATCTCATCTTCCAGGGGCCGCAA
CGACTGCAAGAAAGCCCTGTGCGCGGCGACGAAGTATATGGTGGCGATAG
CTGTTATTGTAGCCCTCGTATTTGGCATTCTGTTTGCGGTGCTAGGCCAG
TCGGATGTGCCCGTCAAGGATTACGAGGTGAAGTGAAACGTCGATGCAGG
TATTGTTTTCATGTTTTTATTTTATTTTATTTTATTTTATTTTTTATTTT
TTTATAAAAAGAGGCGAAGTGCTTGTGGGGGAGGGGGGCGGTGGGGGGCG
GGCGTACTCATTTGTGCTTGCCTTAGTCATTAGACCATTAACCACGCACC
CCTTTCGAGACGGAGCACCGTTTCTACTCGTAGTAGAGACACCTCCAACA
TTTTGGCGCTCTTTACACGTTTTTGCCGTATCTTACATGAAAACCTTTTG
CTTGTGGGGGGGGAGGGTACAACGCTGTGGGCTGTGGAGCGGAAATGGTG
ACACGCTTTGTATCCTCCCAGAAACGCTTGATGAACGCTGATTGTGTTGT
GTACTGCGTACGGGAGGGCTGAAAAACTCACCGTAAAACTCACCATCAGG
AAAACGCGCAAAGCTATGCGAGGCGCGTGGTCCATAACCTATGATGGCCA
GCTTGTAGGCCTTGAAACACATGGACGTTTTTTCACCGTCGCGTTATGCT
ATTCCCTGGCCTCTCCTTGTCCTTCCCGTGCTACGGTTGTTATGGCACTG
CGCCACGGATTCAGTTTGCCATGCCGGTTCTCGTGTCGACCGGAGAGGAC
GGAAACCGCATCACCATCTCCATGCCCAACGGGGAGACGGAGGACCTCTC
TACGAATCGCTCCGAAATGGATGGCAGCATCACCGTATCGGACAAGGACG
TTGTGCTTCAGGTGGGTGTTTTTTTTTTGTTTGCGCGAGTGTGTATGTGT
GTGTTGTGTCGCTTTTGTGTTACATGCTTGAGGCTGTACGTGAAACCCGT
TCTACTTGGTTCAATATTAGTAGTTTTGTACTTCCAAAGTTGAATAGTGT
GCTCGTTGGCAGTGTTGCGGCAGATGCTTCGCGCGGTAGTTTTTGGAGGT
GCCGACAGAGGAGTCCCCGCGGCGAAGGTGTCGATAGCGTGCCACCCTTG
ACCTTCGTTGTTGTGTTTTGCTACCGGCGAGGATGCTGTGCTTGCCGTGC
GTTCCTCTCTCGGTCGGGAGCTGCAGCCAATTTTCTCGTTGCGGGTGCCC
TTGTCGTGCAACAGTAGTCTATAAAATATGCTATCATATGATGCACCATG
TCTGGCGTGTGTTTTATCCGCTCATGTGGTATCCCCCCCCCCCCTATTTT
AACGACGCATGCGCGTTTTTTGTTTGGCAAAACCAAATGGTGGTGGGCTA
TGGCGACGCTTTGCTGGACTATAGCTGTCCTTCCCGGTGTTCGTGATGGC
CCTGATGTCATTCGTGGGCTGGATCCTGTTTGTATTTTTCGGCGGATTGG
GGCTCGTGGGCATCCCGATCGACAGCATCAGGGTGAGGGTGATCAGGCGG
GGGTTAGTGATTTCTGTGTCGCGAGAGTACTATGATACCGCTCAGCTTAC
CATGTGTCTTCCGATGATGTCGACGTTCGAGCAACGAGCCAGCTGCGGCG
AATGCTTTCGTCTTGCGTGTTGTTTGTATTTGGGCGTACGTGGGGTGAAG
AAAATGATTTCGGACGTTGGACCTCGGACCGTCCGTCGTTCATCCAGCAT
GTGTAGCGGTGTCGGACGTCGTGCAGTACTGTGTATGTGATACACGTAGG
CAGAGGCGAGACAGGCCGTACGGTATTGCTGCGGTGGGCGTAAGTGTCAG
ATACGGGAGATTGGACACATTGGTATGATGCGGCCTTCGTCATCCTTGCA
GCCGTCTTTTTTTACCTGTACCTGTACTTTTGTCTCTGTACCCCTCCCCC
CTGCCGTTCTGCTGTTGCTCTCTGGCCCTTTCCGCTCGAACCTCCCCCCT
CCCCTCCCCCCCGGTGTCAATGGTGGAACGACTAAGGCAAGCAACAACTG
AATACGCACCCCCCTCCCGTCATGTCGATCATCGTCTACCCCTCTTCTTG
ATTGTGCACAAACCGTACTCGATGCCTTTTAGTTCTGCCTCCGTGGCGTT
CGCACTCCTGTCCTTACCGCTTTTATCCTCCTTCCCTGCACGTTTCTACT
TTGCGTTATTTCTGGGCGGGGGCGATCTCGTGGTTTATTGTTGCGGCGAC
AAACGAAACGGCAGTCTTTCGTGAATCGACCTCAGCGGCTCGACCGGGGC
CAGGTGGCCACTCTCGAGTTGATGATCAAGCGCCGCTGCGACGAGCTCGT
GTCCGTCGGCGAGCAGATTAAAGGGGTGCGACAGGACACCCGCGAGGCGA
TCGACAGTGGCGAGCTGCGGTTCTTCGAGAAGCGGCGACGGAACAACAGG
GGATCCGCGGAGTTCAACCAGTTTAAGCAGGCGAGAAAGACTTAGGGGAG
GCGGGGGAGGGGACGACGGGGTTTTTACCCGTTAACTATCCTAGCTCTTA
AACAAGATATCACAACAGTTGTATGATAAGACAATAAAAAATATCGACGT
TTTAGTCCATGGAAAAGACGAGCAGCCTAATCCAACAAATGCAGCGTGTA
TTGTTGTAGCATTAGTGATGTACTGTTGCACCAGGTAGTTTGTTCGTAGA
TGAGTGTGGCTCGTCGTTATTTTGTTCGGGAACGTCGGTAAGTCAGCTTT
GCCGTATGATATGAACTGGCTCTTCTACGATTGACCAGTCGCCCCCGGAT
TGGCGCAAAGGTTTTTGGTTCCCCCACGGGAGTTTTTTTTTTATTCCGCA
TGGAAAAGCGGGGGGGGGGGGTACATCACATACGGGACTACGTGGGGGGT
GTTTTTTTGCGTTCGTTTGTGCGTACGACGACTCGCCACGCGTCGCCAGA
GAGATGGGGCATGGCGTTGTCTCAGAAGGGGGGGGTGGAGGAGACGGTGG
GGGGCATGTCCGTGTATTCATCAGTTGCCAAGTATTTGGCCGTTTCATCG
GGAGGTTGGATTGAAGGGACAGAGAGTACAGAGACCACAAGAACTTGACC
AAACCATGGATGGGCGATGCTTGGCATATATGGCAGCTTGTGCGTTACTG
TTGGGGGTGTTTGTTGTTTTGTTGTTTCGTTTGTGAAAGCTGTGCACGTG
ATATCTGATCTTGTACTACTTGGATCGGCCTGATCCCCCCCGGTGCAACA
AACACGGCAAAGTCCACTGGACATATCGTGTGAGATTGCGAGCTCCGCAA
ACACCGCACTATTTGGACGTGTTTGATCCGTGTGTTAGCACGTACCGTAT
TTTTTTGTCCCTCCCGACTCAAATAACGGGTAACTTCGGCCAATACGACG
TGACCTTACTTCCGGCCTTGTCTTTCGCAGGCTGTGTACATTCTGGAGCA
AGACTTCGACGTCATGGTCATCTGTAAGGACTACAACCGAAAGTGAGCGT
TCTGTCATGGAAACTATGGTAGGGGGGTGGGGGGGAGCGCTTTACGCTCT
TTTTTTGTTGTTGTTTTGTCTGGTATCGTAGGACATACGATGCATACATA
GGCGGTTCTCTAGGGGACCACTACTACTGTGGTGTTTTTCGTCATGTGTG
TGTGTGTGTGTGTTGGAAGAAAAACCGGACGGGGAAGAAGGTGAATGTGG
CATGATACCTTCTTTTTTGTTGTTGTTGGTGGCAGTACTATCGTTTGGGA
TTGCTGTCCTTTGTTGATAGCACTGCTGCGTCGGGCCACACGCCATAACG
CGCGGAGTGCCATGTGTCATGAGAGGAACGAGTAAAATGTGGGAGTATAA
TCTGTAATGCTGGACTCTGATGTATGCCTTGGCTTGCACGTGGATGATGC
TCAAGAGTTTTTACGATATGACTGCTTCCACGCCATGAAAGCAGACACAC
GCATGGTAGGCGCGGCGCTCAGCCGCCTCCGCCCATCGCAGCTCTCCGTG
TTGGAGGTGCTGTGGCTTGTAGGGGACGACGCACGGTGATGAACCCCAAG
CTGTCTCCCTGTGTAGACAAGCAGCATGGACACCATGTTACAACCCCGGC
ACACCGTCGAAGGCATTTTTTGGTGTCTTGGTGTTTTCCAAGGCCGGACA
CCCGCGGCCGGTGGCACTGTATGTAGACTACTATCACGAGGGCCCCTAAT
AAATAGGCCCAAAAGACCTATATTGGCTTGTGTATCGCGAGACAGACACC
GCGTGAATCGCGGAACTCGTTCGATTTTATCATACGGTAGCAGTAGAGTT
ATCAACGATGCTACACTTTCAACCTTCGGGGAGGCGGGGGCGGGTCGGGA
AGGATGTTTGCTCCCCCTGATTCACCCTGTTTTGGGCTTATTTGTTATGG
GCCTCTGTGATAGTAGTTCAACAAACTGCGTACAACATGTTCCCTTTGTC
GGTTTTTGTTTTGAAGCACGGCCGTTCTATAAGTGTTGTCTCAGGGGTTT
TATCCTGTGCCGCGTCCCGTCCACTCGGCGGGCGATTTTTTTTTGTTTTT
CAGGTTCAACCCGCTGAAACCGGTGTTGTGGCTCATGGCGGGCATCGCGA
CAGCCGTGATCGCGATTATATGGATAGTGCACATGATCTTGTACATGATA
ATACAGCCGGCCGTGGACCCTTTCCTGAACGAGTACTTCTTGTGGTTCGA
CGAGTGGTTCCCCCTGTTCGGGGTGCTCTCGGTGGCGATATTCTCCATGT
ACCTGCTCGTGGCGTGCGTCAAGGGGTGCTTCAAGTTTGGCCTGAGACTG
GTGTGGTTCACGCTTCACCCCATGAAGCCGAACGGGACGTACATGAACTC
CTTCCTCTTCAATTGCGGGTGAGCCGTTACGTTCTTGGAATAATAATACC
GATCTGTATAGACTGTATAGACTACTGTCATTCGTACGAGTAGCCCAATA
CATTTCCCTGCCGCGCTATTATTCTGTAATACGATAGATTTTAATAGATA
AACAGAGAGTTAACTTTCCGTGGTACGCCACTCGAAACGTATTTTCCCGG
AAGACACCAAATCACCCCCCCCCCCCCCCCTCTCTCCGAAGGTGCCGAAG
TCCCCCTCTCAAGTAGTTCTTAGTAGGATGCAGGTCACCCTTCATGCGCC
GAACACCTCACGGCTCACGGCGCTTCGCGCTTGGTGCACGCGATGTCTGC
CTGGTCGGTGAAAACCCGACGTGCTCCGTCCCGGCATTGTAGGGATGCGA
GGGTCTATGGTCATACGACTACTGCCATGCATGAAATGAGTACACCCCCC
CCCCCCCCGCGTATGCCGCAACGATGATTGGATGTCGTTTTTTGTTGTTT
GTGGCAGGATTATCCTCATGTGCACGCCGCCTGTGATCCAGTTCACAGTG
CAAGCCCTCTCCGCCTACCTGCGCAACACGGAAGTGACCGGCTTCTTCAA
CGTTCAGGTGCTTTTTTTTTTATTTATTTTATTACCCTCACATCGCTTCT
GTTTTGTCTCTCAAGCTCTCCGTACAGTAAACTTGCTGGCCTTTGTTCCT
GTCCAGGTTGCTGTTTTACTACAATAACAGACATGTGTCGTCATGGCTAG
ACCGGGTAGTGCATTGTTACCTTGGAAATAAAAAGTTGGTGGTTGCTTCA
TGTTTTGAAGAATCTTACTGCGCGCTCGCAATGACCCTTTGGGGAGTGGG
TGGGTGTGTGTGGCTTGTACTGAGCTTCATCGATTACTTTGCACTCACGA
GAGTTGCTCTTGCGCTGCCCCCCTATTTCGTGAGGCCACTACTTACTGTA
CTCATACAGTACCCACTTAATGTGCTCTACGCAACCGCGCCTCGTCGTAC
GGGACTTATTTTGTCAGGTTCGCTACGTGAGGTTCTTTAGATACTTCTTC
GCGAACAACATCTTCGTCTATGCTCTCCTTGCGCTGGCGCTGCTGTCCGC
CATTTGGCTGGTGGGTGCCTTGCGTCGTTTTTGCTGTTTCATGTTGTTTT
CTAGTGGCGTAGGACTCGTGGCTTGCACGTGTGTAATGCCCGTTGTATTG
CTCCGCTCGTTATTTGCATCGATGGGTTCTGCGGGGGGCGGCCGAGACAT
GCTCTCGCACCTGCTGTGTTAGCTCGAGCGCACATGTAGGAGGTGGTCTC
TCTTTTGCTTACATATTCCCATTCGCCACCATTTATTTTGCAGTGCCAGT
ACGTACGTCCTTCATTCGAAACTATTATGCGTCGTACAAGTTGGCTTGTT
CACGCGCTGTGCGTGCTGCGCGCTATTGTGTCTACTGGTTTTGAAACGAA
GCATACACAGCGAAACAAAAATCGGAATTTCGGCATATATATCAGATCGC
TCTGTCCCGGCAATGTTGTCGTCGTCTGTTGGGCTGCGATGAAACCGATG
ATATAGTAAAAAAGACTATACCTTGCGGTTCTCATGAAAGTACACTGCCC
CTGCCCCCGCCCGCCCGCGCGCTGTTGGGTTTATTTTTCTCGACCTCTCT
TTGTTTTGTCGTCGATCAGTCGTTCAAGCCAGTGGACAACCCCGTGAGCG
CGAAAAACATCCAGGAGACGCTAAGGAAGTCTGCCGAGTACCAGGCGGCG
CACCCCCCGGCTCCTTCCGCCAGTGCCAATGGGACTGCGGTAACCGGGGA
TGGCATGGCGTTTAACGCGCAATGACGCCTCTCTTCCTCCATCTTTGTTT
AGTGTGTGCGCCGCAATATATTAATGGGTCCGGCCGGCATCGCTCGAATC
GAAATTATTATTGCGGGAACACTCTTTCTCTTTTGTTTTGTTGCTGTTGT
ATCCCGTTCGCGCCTTTGTTGTCTTTTTTGGTGTCATACTTTATAGCTAT
TCTTTGCTTTTTTTTTTAAACAGAAAGTCTTGATTACTCCCCTCGTCTGA
CTTGCCCAGAAATGTGTGTACAAACCCCGCTAAGAAAACTCTTGAGTTTG
ATGTGCGGTTATCTTTTTGCCTCTCTCCTGCCGAGCGTGTGTGTTGTGTA
ATGTTAAGAACCCACCCATATTGTTGTGGGCGATTGTAGTGTGGGCCGGG
TGAAGGGCCGGTGACGAGTGGGGGCGGCGTTGCTAGGTGTTGGATGTTTT
TTTTGCTACGGGGCGGTGTGTTATTTTTTTAAGGCGGGGGCGGAG
back to top

Coding sequence (CDS) from alignment at D-herbacea_F_contig100:461670..475814-

>mRNA_D-herbacea_F_contig100.225.1 ID=mRNA_D-herbacea_F_contig100.225.1|Name=mRNA_D-herbacea_F_contig100.225.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3426bp|location=Sequence derived from alignment at D-herbacea_F_contig100:461670..475814- (Desmarestia herbacea DmunF female)
ATGGCAGCGGGATTCCTTATCGAGGCCGACTGGTTTCTTTACATTGTGCT
CTTCGCTGCCATCTTAATTCTGCTCGCGATAAATGTCTACGTCGTGGTGA
TCTGGCAGCATCCGGACGACAAGAATGAGGCCTACTTCCCGAAGGCTATT
GTGATGGCAGCGGGATTCCTTATCGAGGCCGACTGGTTTCTTTACATTGT
GCTCTTCGCTGCCATCTTAATTCTGCTCGCGATAAATGTCTACGTCGTGG
TGATCTGGCAGCATCCGGACGACAAGAATGAGGCCTACTTCCCGAAGGCT
ATTGTGCTGTTATCGCTCACATTGGCGGAGCTTGCTATTATAATGCTGCC
CATTGACGCGGCGAACAACTCGGGTAACGTGCAATGCGACGGGACATGGA
GCAGCGTGTTCTGCGGCTCCTTAGACATGGAAGCGGCGTGGTACACCATA
TTTTTGCTCATCTTCATATTTGCGCTGTTTATCGTGCCCTACACCATTTT
CTTCTACGAGGAGGACGATTCCTTCGCTCTCACCTGTTATCGCTCACATT
GGCGGAGCTTGCTATTATAATGCTGCCCATTGACGCGGCGAACAACTCGG
GTAACGTGCAATGCGACGGGACATGGAGCAGCGTGTTCTGCGGCTCCTTA
GACATGGAAGCGGCGTGGTACACCATATTTTTGCTCATCTTCATATTTGC
GCTGTTTATCGTGCCCTACACCATTTTCTTCTACGAGGAGGACGATTCCT
TCGCTCTCACGGGCCGCAACGACTGCAAGAAAGCCCTGTGCGCGGCGACG
AAGTATATGGTGGCGATAGCTGTTATTGTAGCCCTCGTATTTGGCATTCT
GTTTGCGGTGCTAGGCCAGTCGGATGTGCCCGTCAAGGATTACGAGGGGC
CGCAACGACTGCAAGAAAGCCCTGTGCGCGGCGACGAAGTATATGGTGGC
GATAGCTGTTATTGTAGCCCTCGTATTTGGCATTCTGTTTGCGGTGCTAG
GCCAGTCGGATGTGCCCGTCAAGGATTACGAGTTTGCCATGCCGGTTCTC
GTGTCGACCGGAGAGGACGGAAACCGCATCACCATCTCCATGCCCAACGG
GGAGACGGAGGACCTCTCTACGAATCGCTCCGAAATGGATGGCAGCATCA
CCGTATCGGACAAGGACGTTGTGCTTCAGTTTGCCATGCCGGTTCTCGTG
TCGACCGGAGAGGACGGAAACCGCATCACCATCTCCATGCCCAACGGGGA
GACGGAGGACCTCTCTACGAATCGCTCCGAAATGGATGGCAGCATCACCG
TATCGGACAAGGACGTTGTGCTTCAGCTGTCCTTCCCGGTGTTCGTGATG
GCCCTGATGTCATTCGTGGGCTGGATCCTGTTTGTATTTTTCGGCGGATT
GGGGCTCGTGGGCATCCCGATCGACAGCATCAGGCTGTCCTTCCCGGTGT
TCGTGATGGCCCTGATGTCATTCGTGGGCTGGATCCTGTTTGTATTTTTC
GGCGGATTGGGGCTCGTGGGCATCCCGATCGACAGCATCAGGTCTTTCGT
GAATCGACCTCAGCGGCTCGACCGGGGCCAGGTGGCCACTCTCGAGTTGA
TGATCAAGCGCCGCTGCGACGAGCTCGTGTCCGTCGGCGAGCAGATTAAA
GGGGTGCGACAGGACACCCGCGAGGCGATCGACAGTGGCGAGCTGCGGTT
CTTCGAGAAGCGGCGACGGAACAACAGGGGATCCGCGGAGTTCAACCATC
TTTCGTGAATCGACCTCAGCGGCTCGACCGGGGCCAGGTGGCCACTCTCG
AGTTGATGATCAAGCGCCGCTGCGACGAGCTCGTGTCCGTCGGCGAGCAG
ATTAAAGGGGTGCGACAGGACACCCGCGAGGCGATCGACAGTGGCGAGCT
GCGGTTCTTCGAGAAGCGGCGACGGAACAACAGGGGATCCGCGGAGTTCA
ACCACATTAGTGATCATTAGTGATGCTGTGTACATTCTGGAGCAAGACTT
CGACGTCATGGTCATCTGTAAGGACTACAACCGAAAGCTGTGTACATTCT
GGAGCAAGACTTCGACGTCATGGTCATCTGTAAGGACTACAACCGAAAGT
TCAACCCGCTGAAACCGGTGTTGTGGCTCATGGCGGGCATCGCGACAGCC
GTGATCGCGATTATATGGATAGTGCACATGATCTTGTACATGATAATACA
GCCGGCCGTGGACCCTTTCCTGAACGAGTACTTCTTGTGGTTCGACGAGT
GGTTCCCCCTGTTCGGGGTGCTCTCGGTGGCGATATTCTCCATGTACCTG
CTCGTGGCGTGCGTCAAGGGGTGCTTCAAGTTTGGCCTGAGACTGGTGTG
GTTCACGCTTCACCCCATGAAGCCGAACGGGACGTACATGAACTCCTTCC
TCTTCAATTGCGGGTTCAACCCGCTGAAACCGGTGTTGTGGCTCATGGCG
GGCATCGCGACAGCCGTGATCGCGATTATATGGATAGTGCACATGATCTT
GTACATGATAATACAGCCGGCCGTGGACCCTTTCCTGAACGAGTACTTCT
TGTGGTTCGACGAGTGGTTCCCCCTGTTCGGGGTGCTCTCGGTGGCGATA
TTCTCCATGTACCTGCTCGTGGCGTGCGTCAAGGGGTGCTTCAAGTTTGG
CCTGAGACTGGTGTGGTTCACGCTTCACCCCATGAAGCCGAACGGGACGT
ACATGAACTCCTTCCTCTTCAATTGCGGGATTATCCTCATGTGCACGCCG
CCTGTGATCCAGTTCACAGTGCAAGCCCTCTCCGCCTACCTGCGCAACAC
GGAAGTGACCGGCTTCTTCAACGTTCAGGATTATCCTCATGTGCACGCCG
CCTGTGATCCAGTTCACAGTGCAAGCCCTCTCCGCCTACCTGCGCAACAC
GGAAGTGACCGGCTTCTTCAACGTTCAGGTTCGCTACGTGAGGTTCTTTA
GATACTTCTTCGCGAACAACATCTTCGTCTATGCTCTCCTTGCGCTGGCG
CTGCTGTCCGCCATTTGGCTGGTTCGCTACGTGAGGTTCTTTAGATACTT
CTTCGCGAACAACATCTTCGTCTATGCTCTCCTTGCGCTGGCGCTGCTGT
CCGCCATTTGGCTGTCGTTCAAGCCAGTGGACAACCCCGTGAGCGCGAAA
AACATCCAGGAGACGCTAAGGAAGTCTGCCGAGTACCAGGCGGCGCACCC
CCCGGCTCCTTCCGCCAGTGCCAATGGGACTGCGGTAACCGGGGATGGCA
TGGCGTTTAACGCGCAATGATCGTTCAAGCCAGTGGACAACCCCGTGAGC
GCGAAAAACATCCAGGAGACGCTAAGGAAGTCTGCCGAGTACCAGGCGGC
GCACCCCCCGGCTCCTTCCGCCAGTGCCAATGGGACTGCGGTAACCGGGG
ATGGCATGGCGTTTAACGCGCAATGA
back to top