mRNA_D-herbacea_F_contig100.222.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig100.222.1
Unique NamemRNA_D-herbacea_F_contig100.222.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: A0A6H5JJZ4_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ4_9PHAE)

HSP 1 Score: 501 bits (1289), Expect = 8.440e-172
Identity = 254/319 (79.62%), Postives = 273/319 (85.58%), Query Frame = 2 
Query:  152 MRASRSRS-FERFS-FGEPRARSTSLNEHENRRSSYHRERSGFAAAARGRNEGRRLQRAGEPQQAVSSDGSTIFALRAPDVVFCGDKSRGRKLRVVCLSDTHGKHHSMRHKIPDGDILIHCGDFSTKLYQRDFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRISNAIYLEDSGTTVEGLKFYGTPWTNSSQMGFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAFDRGSTAKDNPCPVCGETHRSFAHWGSWSLTERVARLKPKVHVFGHVHNSHGIVRRDETVYINAAQDEIPQPIFFDIWV 1102
            MR SR+R  F+R +  G+ R+RSTS   H   RS      S  +   R R EGR + RAG  + AV+SDGSTIFALRAPD+V CGDKSRGRKLRVVCLSDTHGKHH+MRH IPDGDILIHCGDFSTKL QRDFEAA EDF+RFLGSLGH HKLVIAGNHEIAFN YTR+QIQRRISNA YLEDS TTVEGLKFYGTPWTNSS MGFSCRGA+LEGVWSAIPEGVDILLTHMPP+N LDLAFDRGS AK +PCPVCGETHRSFAHWGSWSLT+RVA LKPKVHVFGHVHNSHGI+R+DETVYINAAQDE  QPIFFDIWV
Sbjct:    1 MRGSRNRGGFDRSADAGDIRSRSTSFEHHF--RSHVASPTSTPSRGGRRRLEGRSVPRAGAEEPAVTSDGSTIFALRAPDIVCCGDKSRGRKLRVVCLSDTHGKHHAMRHTIPDGDILIHCGDFSTKLQQRDFEAAVEDFDRFLGSLGHPHKLVIAGNHEIAFNNYTREQIQRRISNATYLEDSETTVEGLKFYGTPWTNSSHMGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSNAKADPCPVCGETHRSFAHWGSWSLTDRVAELKPKVHVFGHVHNSHGIIRKDETVYINAAQDENQQPIFFDIWV 317
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: D7FHZ7_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ7_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 2.330e-132
Identity = 185/208 (88.94%), Postives = 195/208 (93.75%), Query Frame = 2 
Query:  479 IPDGDILIHCGDFSTKLYQRDFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRISNAIYLEDSGTTVEGLKFYGTPWTNSSQMGFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAFDRGSTAKDNPCPVCGETHRSFAHWGSWSLTERVARLKPKVHVFGHVHNSHGIVRRDETVYINAAQDEIPQPIFFDIWV 1102
            + DGDILIHCGDFSTKL QRDFEAA EDF+RFLGSLGHRHKLVIAGNHEIAFN YTR+QIQRRISNA YLEDS TTVEGLKFYGTPWTNSS MGFSCRGA+LEGVWSAIPEGVDILLTHMPP+N LDLAFDRGS AK +PCPVCGETHRSFAHWGSWSLT+RVA LKPKVHVFGHVHNSHGI+R+D+TVYINAAQDE  QPIFFDIWV
Sbjct:   14 LQDGDILIHCGDFSTKLQQRDFEAAVEDFDRFLGSLGHRHKLVIAGNHEIAFNHYTREQIQRRISNATYLEDSETTVEGLKFYGTPWTNSSHMGFSCRGAQLEGVWSAIPEGVDILLTHMPPFNRLDLAFDRGSHAKADPCPVCGETHRSFAHWGSWSLTDRVAELKPKVHVFGHVHNSHGIIRKDDTVYINAAQDENQQPIFFDIWV 221
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: A0A7S4MMV8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MMV8_9EUKA)

HSP 1 Score: 255 bits (651), Expect = 4.220e-77
Identity = 116/217 (53.46%), Postives = 153/217 (70.51%), Query Frame = 2 
Query:  419 KLRVVCLSDTHGKHHSMRHKIPDGDILIHCGDFSTKLYQRDFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRISNAIYLEDSGTTVEGLKFYGTPWTNSSQMGFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAFDRGSTAKDNP-CPVCGETHRSFAHWGSWSLTERVARLKPKVHVFGHVHNSHGIVRRDETVYINAAQD 1066
            ++R+V +SDTH  H+     IPDGDILIH GDF+ ++    FE   EDFN FLG+L H+HK+ +AGNHEIA N YT+K+IQ+ + N +YL+DS   + G+KFYG+PWT SS+MGFSC  AE++  W  IP   DIL+THMPP+N+LDLAF   S A DN  C  CG++H  + HWGS SL ERV  +KPK H+FGHVH+  G  R  +T ++N+A D
Sbjct:   19 RVRIVHISDTHKSHNRYLSSIPDGDILIHSGDFAQRMKTEGFEEKMEDFNNFLGALPHKHKIFVAGNHEIALNNYTKKEIQKMLPNCVYLQDSSVKLMGIKFYGSPWTTSSRMGFSCPRAEIKKKWKKIPRSTDILITHMPPFNILDLAFS--SKALDNSTCSTCGKSHERYRHWGSNSLLERVETVKPKFHLFGHVHDDPGFKRVGDTTFVNSAVD 233
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: A0A814A372_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A814A372_9BILA)

HSP 1 Score: 187 bits (476), Expect = 2.380e-51
Identity = 99/230 (43.04%), Postives = 139/230 (60.43%), Query Frame = 2 
Query:  410 RGRKLRVVCLSDTHGKHHSMRHKIPDGDILIHCGDFSTK-----LYQRDFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRI-SNAIYLEDSGTTVEGLKFYGTPWTNSSQMGFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAFDRGSTAKDNPCPVCGET-HRSFAHWGSWSLTERVA-RLKPKVHVFGHVHNSHGIV---RRDETVYINAAQD 1066
            R + + VV +SDTH  H  +   IPDGDI +HCGDF+ +     L       +  DFN++LG L H+HK+VI GNHEI F  ++ ++IQ ++ SN+IYL+D    VEG+  YG+ W  + +    CR       WS+IP  +DIL+THMPP  +LDLAF     A   PC +C  T H S+ HWGS SL + +  R+KP++H FGHVH+ +G       + T++INAA D
Sbjct:   21 RYKTISVVIVSDTHKNHEKIN--IPDGDIFLHCGDFTNRGDWLNLTNDQIPQSVIDFNQWLGRLTHKHKIVICGNHEIGFEKFSTEEIQSKLLSNSIYLKDDLIQVEGITIYGSSWHFNER----CRAK-----WSSIPSDIDILMTHMPPKFILDLAFQPRKVASTEPCSICNNTVHGSYGHWGSKSLIKEIRQRIKPRIHCFGHVHDDNGYKYDQHENGTLFINAAAD 239
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: A0A817R4F3_9BILA (Hypothetical protein n=6 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817R4F3_9BILA)

HSP 1 Score: 186 bits (473), Expect = 6.400e-51
Identity = 97/230 (42.17%), Postives = 136/230 (59.13%), Query Frame = 2 
Query:  410 RGRKLRVVCLSDTHGKHHSMRHKIPDGDILIHCGDFSTK-----LYQRDFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRI-SNAIYLEDSGTTVEGLKFYGTPWTNSSQMGFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAFDRGSTAKDNPCPVCGET-HRSFAHWGSWSLTERVA-RLKPKVHVFGHVHNSHGIV---RRDETVYINAAQD 1066
            R + + VV +SDTH  H  +   IPDGDI +HCGDF+ K     L       +  DFN++LG L H+HK+VI GNHEI F  Y++++IQ  + +N IYL+D    VEG+  YG+PW+                 W +IP  +DIL+TH+PP  +LDLAF     A   PC +C +T H S+ HWGS SL + +  R++P++H FGHVH+ +G        ET++INAA D
Sbjct:   21 RYKSISVVIVSDTHKNHEVIN--IPDGDIFLHCGDFTNKGDWRSLTNDQIPQSIIDFNQWLGRLKHKHKIVICGNHEIGFQKYSKEEIQSNLLTNCIYLKDELIQVEGITIYGSPWSFKEHY---------RTKWLSIPSNIDILMTHIPPKFILDLAFQPKKVASTEPCSMCNDTVHGSYGHWGSKSLIKEIRERIQPRIHCFGHVHDDNGYKYDQHESETLFINAATD 239
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: A0A7S3XQM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQM8_HETAK)

HSP 1 Score: 178 bits (452), Expect = 3.320e-49
Identity = 83/147 (56.46%), Postives = 103/147 (70.07%), Query Frame = 2 
Query:  434 CLSDTHGKHHSMRHKIPDGDILIHCGDFSTKLYQRDFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRISNAIYLEDSGTTVEGLKFYGTPWTNSSQMGFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAFDR 874
            C+SDTHG+H  +   IPDGDILIH GDF+ KL +RD   + E+FN FL  L H+HK+VIAGNHEIA N   R++IQ+ +SN  YL+DS   V+GLK YG+PWTNS +MGFSC G  L   W  IP   D+L+TH+PP  VLDL   R
Sbjct:    1 CISDTHGQHSKLLPCIPDGDILIHAGDFTNKLRKRDMVKSLEEFNDFLQKLPHKHKIVIAGNHEIALNGIPREEIQKHLSNCHYLQDSSVMVDGLKIYGSPWTNSVEMGFSCSGKYLHKYWDRIPLDTDVLVTHLPPEGVLDLPGPR 147
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: A0A1S3JYP0_LINUN (UPF0046 protein C25E10.12-like isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JYP0_LINUN)

HSP 1 Score: 180 bits (456), Expect = 3.090e-48
Identity = 93/255 (36.47%), Postives = 142/255 (55.69%), Query Frame = 2 
Query:  401 DKSRGRKLRVVCLSDTHGKHHSMRHKIPDGDILIHCGDFSTKLYQR------DFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRISNAIYLEDSGTTVEGLKFYGTPWTNSSQMG----FSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAF---DRGSTAKDNPCPVC-GETHRSFAHW-GSWSLTERVARLKPKVHVFGHVHNSHGIVRRDE-------TVYINAAQDEIPQPIFFDIW 1099
            ++S  R LR+V +SDTH KH      IP GD+L+H GDFS   + R      D+    +  ++F GSL H+HK+ +AGNH++    +T ++I+  + N  YL+D    +EGLKFYG+PWT S        F+    EL+  WS +P+ +D+L+THMPP  + D  +    R  T   +PC  C    H    H+ GS  L + + R++PK+HVFGHVH ++G+ R          T   NA+ +  P P+ +D++
Sbjct:   25 ERSDARVLRIVHISDTHNKHREYAPHIPGGDVLVHSGDFSNFNFFRKWFKEIDYRYELKALDKFFGSLPHKHKIFVAGNHDLNLEKHTSQEIRNNVKNFTYLQDDWIEIEGLKFYGSPWTASRSSSRADAFTEPIEELDSKWSKLPDDIDVLVTHMPPLGIRDKEYIYRGRFKTMSFDPCKFCESRAHPLSVHYFGSKGLLDALKRIRPKIHVFGHVHGTNGVTRLKHNQDGTANTFCSNASMEGHPTPVVYDLF 279
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: A0A0D2WSJ3_CAPO3 (Metallophos domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WSJ3_CAPO3)

HSP 1 Score: 182 bits (461), Expect = 1.220e-47
Identity = 94/237 (39.66%), Postives = 133/237 (56.12%), Query Frame = 2 
Query:  422 LRVVCLSDTHGKHHSMRH--KIPDGDILIHCGDFSTKLYQRDFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRI--SNAIYLEDSGTTVEGLKFYGTPWTNSSQMGFSCRGAELEGVWSAIP------EGVDILLTHMPPYNVLDLAFDRGSTAKDNPCPVCGETHRSFAHWGSWSLTERVA---RLKPKVHVFGHVHNSHGIVRRDETVYINAAQDEIPQPIFFD 1093
            LRVVC+SDTHG+H    +   IPDGDILIH GDF   +   + + A ++ N F  ++ HRHK+ +AGNHE  F+ Y  K IQ+R+  S   YL D    +EG++ YG+ W +   MG+     E    W  IP      + VDI++TH P +N+LDLA    + +  N C VC + H  FAHWG  +L  R+A   R++P V   GHVH+  G +  D  + +NAA     + I +D
Sbjct:  135 LRVVCISDTHGEHFDFFNGGSIPDGDILIHAGDFFDHVAYENMDQALKELNEFFSAVPHRHKVFVAGNHETCFHRYDTKYIQKRLQESGTHYLHDCSVEIEGIRIYGSAWNHCVGMGYGANAQERAAAWDRIPSRANNPKPVDIVVTHQPAFNILDLAHTNSAKSNFNVCSVCNKKHPRFAHWGDKNL--RLALFERVRPFVFQSGHVHDDAGTIEMDGVLVVNAAMQLRRRAIVYD 369
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: UPI001E1D9459 (UPF0046 protein C25E10.12-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D9459)

HSP 1 Score: 177 bits (450), Expect = 1.250e-47
Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 2 
Query:  401 DKSRGRKLRVVCLSDTHGKHHSMRHKIPDGDILIHCGDFSTKLY-------QRDFEAATEDFNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRISNAIYLEDSGTTVEGLKFYGTPWTN----SSQMGFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDL-----AFDRGSTAKDNPCPVCGETHRSFAHWGSWSLTERV-ARLKPKVHVFGHVHNSHGIVRRDETVYINAA 1060
            +K   + +R+V +SDTH +H   +  IPDGDILIH GDFS           +RD E+   + N F   L  +HK+++AGNHE++F+   +  ++ +++   YL+D   T+EGL  YGTPW+     S   GF+     L   W  IP   DIL+THMPP  +LDL     A  R   + ++PC +CG+ H    HWG   L + +  RL+P +H+FGHVH  +G+   D   + NAA
Sbjct:   10 EKGEAKVVRIVHISDTHMRHDQYQESIPDGDILIHSGDFSAFSVGRYFGNKERDRESVIREINSFFQKLQFKHKVLVAGNHELSFSDKNKDFVEEQLTEVTYLQDKSITLEGLNIYGTPWSAKRAVSYARGFAKPRQHLHRYWDKIPSQTDILVTHMPPEGILDLGTKTCAGIRNLFSSNDPCNICGDMHEMNEHWGCKELKKTIFKRLRPTLHLFGHVHEGNGVTVADGITFSNAA 246
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BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Match: A0A8B8DZA7_CRAVI (UPF0046 protein C25E10.12-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DZA7_CRAVI)

HSP 1 Score: 177 bits (450), Expect = 1.290e-47
Identity = 89/227 (39.21%), Postives = 130/227 (57.27%), Query Frame = 2 
Query:  416 RKLRVVCLSDTHGKHHSMRHKIPDGDILIHCGDFSTKLYQRDFEAATED------FNRFLGSLGHRHKLVIAGNHEIAFNFYTRKQIQRRISNAIYLEDSGTTVEGLKFYGTPWTNSSQM-----GFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAFDRGSTAKDNPCPVCGETHRSFAHWGSWSLTERVAR-LKPKVHVFGHVHNSHGIVRRDETVYINAA 1060
            RKLRVV +SDTH +H  + H IP+GD+++H GDFS   ++  F     D       N F   L HR K+ +AGNH+     +++++I   +    YL+DS T  +G+KFYG+PWT SS+       F+  G  L   W A+    D+L+TH PPY VLD +   G T     C  CG+ H    H G +SL E V + ++PK+H+FGH+H S G+  +D+ ++ NAA
Sbjct:   20 RKLRVVHISDTHMEHDDIIHSIPEGDVIVHSGDFSKMRFKNFFFKDHSDSEMLRKVNSFFEQLPHRFKIFVAGNHDTFLTRFSKEEITESLPAVRYLQDSFTVCDGVKFYGSPWTISSRKIKTSKAFTAAGEVLRERWGAVDGDTDVLITHTPPYGVLDYSRHLGDTPPKAVCQFCGKGHPDRGHAGCYSLREAVLQTIRPKMHLFGHLHGSAGLTEQDDIIFSNAA 246
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJZ4_9PHAE8.440e-17279.62Metallophos domain-containing protein n=1 Tax=Ecto... [more]
D7FHZ7_ECTSI2.330e-13288.94Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A7S4MMV8_9EUKA4.220e-7753.46Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A814A372_9BILA2.380e-5143.04Hypothetical protein n=3 Tax=Rotaria sordida TaxID... [more]
A0A817R4F3_9BILA6.400e-5142.17Hypothetical protein n=6 Tax=Rotaria sp. Silwood2 ... [more]
A0A7S3XQM8_HETAK3.320e-4956.46Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1S3JYP0_LINUN3.090e-4836.47UPF0046 protein C25E10.12-like isoform X1 n=1 Tax=... [more]
A0A0D2WSJ3_CAPO31.220e-4739.66Metallophos domain-containing protein n=1 Tax=Caps... [more]
UPI001E1D94591.250e-4737.97UPF0046 protein C25E10.12-like n=1 Tax=Mercenaria ... [more]
A0A8B8DZA7_CRAVI1.290e-4739.21UPF0046 protein C25E10.12-like n=1 Tax=Crassostrea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:423473..430416 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.1
Seed ortholog evalue7.6e-108
Seed eggNOG ortholog2880.D7FHZ7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Calcineurin-like phosphoesterase
EggNOG OGsKOG3947@1,KOG3947@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1937
Cds size954
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927414.2760444-UTR-D-herbacea_F_contig100:423472..4236231622927414.2760444-UTR-D-herbacea_F_contig100:423472..423623Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 423473..423623 +
1690790157.8907232-UTR-D-herbacea_F_contig100:423472..4236231690790157.8907232-UTR-D-herbacea_F_contig100:423472..423623Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 423473..423623 +
1622927414.4277048-UTR-D-herbacea_F_contig100:429584..4304161622927414.4277048-UTR-D-herbacea_F_contig100:429584..430416Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 429585..430416 +
1690790157.9715908-UTR-D-herbacea_F_contig100:429584..4304161690790157.9715908-UTR-D-herbacea_F_contig100:429584..430416Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 429585..430416 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927414.3524537-CDS-D-herbacea_F_contig100:423623..4238461622927414.3524537-CDS-D-herbacea_F_contig100:423623..423846Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 423624..423846 +
1690790157.9020193-CDS-D-herbacea_F_contig100:423623..4238461690790157.9020193-CDS-D-herbacea_F_contig100:423623..423846Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 423624..423846 +
1622927414.3639174-CDS-D-herbacea_F_contig100:426613..4267241622927414.3639174-CDS-D-herbacea_F_contig100:426613..426724Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 426614..426724 +
1690790157.9215844-CDS-D-herbacea_F_contig100:426613..4267241690790157.9215844-CDS-D-herbacea_F_contig100:426613..426724Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 426614..426724 +
1622927414.37497-CDS-D-herbacea_F_contig100:427092..4272081622927414.37497-CDS-D-herbacea_F_contig100:427092..427208Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 427093..427208 +
1690790157.9313927-CDS-D-herbacea_F_contig100:427092..4272081690790157.9313927-CDS-D-herbacea_F_contig100:427092..427208Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 427093..427208 +
1622927414.3846238-CDS-D-herbacea_F_contig100:427709..4277801622927414.3846238-CDS-D-herbacea_F_contig100:427709..427780Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 427710..427780 +
1690790157.9394174-CDS-D-herbacea_F_contig100:427709..4277801690790157.9394174-CDS-D-herbacea_F_contig100:427709..427780Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 427710..427780 +
1622927414.3941972-CDS-D-herbacea_F_contig100:428402..4284871622927414.3941972-CDS-D-herbacea_F_contig100:428402..428487Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 428403..428487 +
1690790157.9470022-CDS-D-herbacea_F_contig100:428402..4284871690790157.9470022-CDS-D-herbacea_F_contig100:428402..428487Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 428403..428487 +
1622927414.4036632-CDS-D-herbacea_F_contig100:428853..4290231622927414.4036632-CDS-D-herbacea_F_contig100:428853..429023Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 428854..429023 +
1690790157.9551473-CDS-D-herbacea_F_contig100:428853..4290231690790157.9551473-CDS-D-herbacea_F_contig100:428853..429023Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 428854..429023 +
1622927414.4136965-CDS-D-herbacea_F_contig100:429406..4295841622927414.4136965-CDS-D-herbacea_F_contig100:429406..429584Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 429407..429584 +
1690790157.9630082-CDS-D-herbacea_F_contig100:429406..4295841690790157.9630082-CDS-D-herbacea_F_contig100:429406..429584Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 429407..429584 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.222.1prot_D-herbacea_F_contig100.222.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig100 423624..429584 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig100.222.1

>prot_D-herbacea_F_contig100.222.1 ID=prot_D-herbacea_F_contig100.222.1|Name=mRNA_D-herbacea_F_contig100.222.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=318bp
MRASRSRSFERFSFGEPRARSTSLNEHENRRSSYHRERSGFAAAARGRNE
GRRLQRAGEPQQAVSSDGSTIFALRAPDVVFCGDKSRGRKLRVVCLSDTH
GKHHSMRHKIPDGDILIHCGDFSTKLYQRDFEAATEDFNRFLGSLGHRHK
LVIAGNHEIAFNFYTRKQIQRRISNAIYLEDSGTTVEGLKFYGTPWTNSS
QMGFSCRGAELEGVWSAIPEGVDILLTHMPPYNVLDLAFDRGSTAKDNPC
PVCGETHRSFAHWGSWSLTERVARLKPKVHVFGHVHNSHGIVRRDETVYI
NAAQDEIPQPIFFDIWV*
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mRNA from alignment at D-herbacea_F_contig100:423473..430416+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig100.222.1 ID=mRNA_D-herbacea_F_contig100.222.1|Name=mRNA_D-herbacea_F_contig100.222.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=6944bp|location=Sequence derived from alignment at D-herbacea_F_contig100:423473..430416+ (Desmarestia herbacea DmunF female)
GCCTCGCTATGTATGGGGAATGACATAGTAATAATGCTACGCATTATACT
AAGTCATTCCCCATAGGTGCCTCGCGTTTTCAAGAAGAGTATACCCTCTC
TGGGGATTTGGGCATCCCATCCTGTTAACAGCTAGTAAGCTGTAGGATCA
TATGAGGGCATCGAGGAGCCGAAGCTTTGAACGGTTCAGTTTCGGCGAGC
CCAGGGCAAGAAGTACGAGCTTGAACGAGCATGAAAATCGCCGCAGTTCC
TATCATCGGGAACGAAGCGGCTTCGCAGCAGCTGCTCGAGGCAGAAATGA
GGGACGGCGCCTGCAGAGGGCGGGGGAACCACAGCAGGCTGTTTCTTCCG
ATGGATCAACCATTTTCGCCTTGAGTGAGTGCGGATGGAAGTGTTTTGCC
GTTTTGCCTGCTACTTATTTCATCGCTGGGGTATAGACAGAGTACAGTAC
TCGCAGTAGTATGATAGTACTACTACTACTACTACTGTACTGTTGTTGTA
CTCACAGCTCAGGGTTGTACTTGGTTGTCTTCCAAATCCTGGAACCGCAC
TGGGTGAGATCGCAAAAGTAGTGCAAGTACGAGCACGTGTATCATACGAG
TCGTATGAGGTATGAGTACTCGTATGGCAGGTTCTTGCACAAGAAGCGCA
TACTCGCACTTCAATACAGTACGAGTAGATGATGTACGAGTATAAAATAT
CTATAAACCACTATTAATACTGCTATGAGTAGTGCCAGCTATAGAGTCTT
CGGAGGCGGCGAACCCTCACCTACTCGTGTAAGGGGTGCTCTACTTTGAG
CTACGACGCTGTGTGACGCCAGGCACGGCAGACAAGGAGACAAGGGTCCC
AGACAAGAGGACAAGAGAAGGTAGCAAGCGAAGGCACTAACGAGGCCGGC
GGGATTGTACGCAAATAATCCAGGAGAAAGTTATCGTAAGTACAGGCGGT
TAAAGCTCGAATGACATGGAGAATGTACGTCTCCAACTGTTCCCCAGAGA
CCCAGAGAAGGATTTAGAACAAAGGGACTTCCTATACTCGTATGTGTAAG
TAGGCCTAGTGGACCTCAGGCACCCTGCTGTCATCCACACTGTACTTATA
AATACTATAAGGCCATTTATTCCACAGTCGAAAATAATGGATCGAAAAAG
GCGATTTCCGATCGGGCTTTTAATCGATGCGAGTTGTCTGGACCTCTTTC
TTGTCGTCAGTCGGATCGAGTTTGCAGTTTTTAAACGGTTCCGAGAAAAG
GGGATATGGTATGATATACGTAGGTGATTCGCTGTCCTGTTCGCGGGTTC
TAGGAGGTTTTCGTCCTTCAGCAGCTGTGGCCAAGCACACATACCCATGT
CTCGCCTTTCCTCGAGCGCGTGCGCTTCACGCGCGGGGAGTCATCGCCCA
AGTCGTCGTCGAGGTTGTGCGGCGTTGGACTTTCGTCAAGAGACGCCAAT
GGTGCGCAGCCAGAGCTTGCAGCTGTGGGCAAGTGCAAGGTCATCGGTAC
CGCGCGCTGCTGCCATCGGAATGCCATTTTTTGTCTCGGATCGAAAATCG
CCTCTTTCGATCCACGAAGTCGACTGTATAAGAAATGGCCTAACAGTGAC
TCCCCTTGGTCTTACATGATGGGTTTTGAGCAAAGAGCCATCGAACAGCA
TACAGTATTGACGAGCTTCGAACCGTTTGAAACCCTCGGTGCACAGTAGT
AGGATCACATTTTTCTCGCGGTACTGCGCAGCGACTACTGTACCAGCAAT
CGCCTCTCGCCCGCGTCAATGTATAGCAACACTTTTCGACAAAGGCCGCA
ATCACGGCTGACTGCGGCAAGTTCAAGTCGTCCTCTTCGTCGATGGTGGT
ATTCGTTGCCCGCGACTAACAATAAAGAGATGTGACAACAACGCAAACAT
ACACCTTTGAGACAACGCGTGTTTTTTCGTACACAGCAGGGGTGGCAAGT
AGGCCAGGTGTTAGATGATCGCCCCTGTTGTCAACCATTGTAGGAAGTTC
GGGGTTCGAATCTCGGTGAAATCAAATGGCACTTTTCTGTGCCATCTTCC
GTCGCGAAAAGCGCGAGAGCGCGAGTAAGGACAACTCGATGAAAATCGAC
GACGGAAAAAAGTGCTGCGCCCATCGCGCGATGTAAATATAGGCACGTAC
CGTAGTGCGGAGGGGGGAGGAGTGCCTGCTCCAAATGTGACCCCGGATCT
GAATCACGAAGAGAGATCGAGCTGGAGACAGAATAGGGCGAAGATAGTCA
CAGTATGGGAAAAAACAAACAACACACAACTGAGAGTGCAACAGCAGTAG
TGCAACCACTACATCACCAACCTCGTGCATCATTCGCGCTTGAGGCTATT
CGGAAGCACAGCCACTACTGTATAGCCACTTCTACTGTGCTACTAGTCAG
CGCTGGCTAGTAGCACAGTGGTGTCGACGTTGCGCTCGTCGTCTCGGTCG
CTGGCGTCGTTGTGGTCGCTGGCGTCGTCGTGATCGCCGACATGGTTGTG
GTCGCCGGTGTCGTTGTGGTCTGTCCCGATCATAGCGACGCCAGCGACCG
ACATGACGAGCGCAAAGTTTCTCGTGTTAAGAAGCACAGCCGCCCGGCGC
CCTGTGCTATACTAGTCAGCGTTTTTGTTCAAAAGCACAGCTATTACGAC
TGTTGCTGTGCTACTATGATAGCTCTGGTCAGCGCTGCGACTAGTAGCAC
AGACAGCAGCAGTAGTGGAGGTTATAATTGCCCATTACCCCGATGGTAGG
CTGACTCTCCATGGGTTGCCTCATATACACACGGCACATACGCTACAGCA
ACGGCAAAAAAATAACTACGAACTTGCGAGGGAAATCAAGGTACTGCTGC
TGTTGCTGCTGGCGGCTGGCTCAACGCACAACGCTCGTTTTTTTTTCTTT
TAGCGGTTGCATTCTACCAGTCGGGAGATTTGGCCAACCGAGTAACGTGG
TCGTTACCATCATGGCTAACCATTGTTTGTTGGCTCTAACATAACATTCC
TTTCAAATATTACTAACTTAGGCAAATTTGTGCCAATGTTAGGTCCATAT
TTGCTTAGCCATCACGCCACATTATTTTTGAAGTCTTCGCTGATTCGAGA
AAACGCGTAATTCCGCTCTGAATCGTCCATTCGGCCAACAGGGGCGCCGG
ATGTCGTGTTCTGCGGAGACAAGTCTCGAGGCCGAAAACTGAGGGTGGTT
TGTTTGTCAGACACGCACGGAAAGCACCACTCCATGCGACACAAGATTCC
AGGTCAGGTCGCACGCATCCAATGCTCGTGCTCTGGTATAGACACGGGAC
GAGTACCAGTATTGTGCTACTATTCTGTGCGTTTTACGCGTTACGGTCGA
TTGGATCGCTTCCTCCCACCGTGTTGTCCTCGCAAACTTGAGCCACTAGA
GACGAACCCCCAAGCTGTTGGGTTTCTACCACGTGCGCTGTTCTTCGTTA
GACAGGCTTCACTGTATTTCACACTGTGACGGTGACAGTACAGTGGACTG
AAAAAGTTGTCATCGCTGCCAGGGCACTCTGCTCGTACATAACATAGAAC
CTTGAAATCGTGAAAACTCCCGTCTCATATTACCAAACCGCCTTGTTTGC
GATTGTTTTCTTGAGCGCAGACGGGGATATTCTTATCCATTGTGGAGACT
TTTCTACGAAGCTATATCAGCGCGACTTCGAGGCAGCGACGGAAGATTTC
AACAGATTTTTAGGCTCCTTGGGGCACCGACACAAGGTACATGATTCAAA
CTCGGAACGGGGTGGATTTTGTTTTGTTTGTTGACGCTATTGAATACTGA
ATACCCGGCCTTCTGACACCTAGTAACAGCAAAAAAAGAAAGAACAGCAA
TGAAAAATGTACTCCCACGCGTATTGGGATGTTGTAGTGAGGTTTTATCT
GTTTCGGAGGCGTCGCGATTGGGAAGAGGGAGGGGGCTAGGGAGTGGGGG
GGGCAAGTCGGTGATGGACAGCGCGTTTTCCTGGGCGTTTCTGCTGGTCG
TTTGAGACATTGCGTGCCAGTAATCGGAGTACGGGTACTACTTACGATAT
TACCATCACGTATTGTTTGGACCAGGCTCGGTTTTTATGAAGAAAGGCGC
AACTCTCTCACTGTCCATTCCGACACTCGCGTCCCATCGATTGGGTGTAC
CTATTCCTGCAGTATTACCAAGTATTTGCGTTTGTATCACCCTCGCTTTT
TTTTCACGTGGTGCCCCTTTTCCGCGTGGTGCCTCAGCTCGTCATCGCCG
GCAACCACGAGATCGCCTTTAACTTCTACACAAGAAAGCAGATACAGCGC
CGCATAAGGTGACCTATCCACCTGCCCACGGTCACGGGTGCAAACCCCCC
CCCCCCCCTCCCTGGCTCCACACGCACGTCATACAACCTCTTCCCCCTGT
CTCGCTCGTTTCGTCTCCCCTCCCGTTCTCCGTTTTATTTTCGTGTTGAA
CTTTTATGTGGGGAGAGATGCCACTCTGTGCACGTCGGAAACGAAGTCGT
GATAATCATACGAAATATTTTCCTTTTCCCTTCGAGCCTTCGATTACCTG
ACCGGTTGAGGCGACAACGGCCAAACGTTGCAACGGGATGATGATACGCT
TTCGACTTCGTTGTAGCGTCCTTGGTGGCTAGCGATACCTGCCCTTGCCA
GCATCTGTACGCGTTTTGTGCTACATCTGTTTGTCCGAAGTCAGCTTTTA
ACGGAAGTCATGGGGGGAGGGAGGTTTTTTTGTCGGTAAAAGCTACTTTC
TGTACATCCTAGCGCTGAGTTAGCAGACACGTCGACAATTGCTCCGCCGT
TATTTTTATGTCGTTGCCGCGGGAAGTGGGTCTTGACAGAGTTTGTAGAC
GTCTACGAGGTGCTGGTGTTTCCCGGCTCATGTTTTCGTTGGCGTTGAAC
CGACGGGTGCCCTCTCTCCGATGCATGCAGCAACGCGATATACCTGGAAG
ATTCGGGCACGACAGTGGAGGGGCTAAAATTTTACGGAACGCCATGGACC
AACTCCTCGCAAATGGTGAGCACGTGTAACTTCCCTTTTCCCCGCAGAAA
TACGTCTTGCAGTTTGGTGCTTGGAGTGATTTGTACGCGATGGACCAACC
CGCCCGGCGCTTCCTGTACTGACGTTCCGATTGAGTTGAGGTTCTGTTTT
GTGTGTGTGTGGGTGTGTGTGTGTTTTTTGTTACGTTGACCGCCGGCCGC
AAAATGTGTCACGTGCTCGCCGTTTTTTTGTCGGTAGGTTGATGTGCCGT
TGACCACGAAATTGTGTTTGGCGTTTATCTGTATCGTTTTGCTAGGCTGC
GCGCGTTTACTGTGCTCGTGCACCGCCCTTACTCCCTCCCCTTGCCATCT
CGTCTCCCTGCGCCCTTCTCGAACTCGTTAGGGATTCAGCTGTAGGGGAG
CAGAGCTAGAGGGTGTATGGTCTGCGATACCGGAGGGCGTTGATATACTA
TTGACGCACATGCCTCCGTATAACGTGCTGGACCTCGCGTTCGACCGTGG
GAGTACGGCGAAGGACAACCCGTGTCCCGTGTGCGGGGAAACGCATCGAA
GGTATGCTCGTTCCTCTGAAGAGCGTGGTGTTATTGTTCCAATCGCCTTC
GCGATCGTTCCAGTCACCCAGCAGATTTTTACTGGGAGACGGCACCGGAT
GCGCTGCCAGTTGTACCAGCTGCTGTGCAAAAACCTCTTTCGTTCAGGCT
GCTATACCACACGCCCCCTTTCGTTCAGGCGGGGATCGCTTCGCTCAGCG
CAGCTCATCCCATATAGATGCCTGCGCTGACAACTTGCGACATTTTGTGC
CTGTGCCGGCACCCTCGTGTTAACACGCTTTTGCTAAAATTTCGTTTTTT
TTTTTCCCCTTCTGCCTGTTTTTTTTTCAATGCTTTGGTACGTCGTTGTC
GCGTACCTGTCTTGGTGGTATCATTGATGCCTAGCTTCGCGCATTGGGGA
AGCTGGAGCCTGACCGAGCGCGTGGCGAGGTTAAAGCCGAAGGTGCATGT
GTTCGGTCACGTCCACAACAGCCACGGAATCGTGAGGAGAGATGAAACGG
TGTACATCAATGCCGCCCAAGACGAGATCCCGCAGCCAATTTTCTTCGAC
ATATGGGTCTGATACGTGTGTATCATACGCGTTGCCTTTACTTGTTGCCG
CTGCACCGTTTGATAGAATTTCATGCGAGGAGGGTTGTGGACGTTGGTCT
TTTGGGTGGATGTGTTTTCTTGATTCGTGCAAGGTTTTATCTCGTGTTTC
GTGAGGGCCTGGGAGGGGAGCCGAATGGCGCGCATGTTGTTTGATAAAAG
GAACATGGTGCAGTGGATGTACGAGTGTCCAGGGTCTTTTGTAGGTTGTA
TATATTGTGTCCGGCGTTTTGACGGACGGAAGATAAGAGACCTGGCAGGA
GGATTAATGGTGGGTGAAGAGATTGCGGCTTTGCCTTTTTGTTGAGAAAG
ACGAGGGAGCCGCAGAGCCCGCGCGACATTTTCAAATAATTATACCCTGT
CTTGTGAGCAAGGACACGTTTTGTAGGAAAAGTCAGCGCCTTCGGGATGC
GGGTCCATCATTGGATACTTGAGCTGTTGGCCAGGTTAGCTATCTATACT
CTATTCCCGTCTATTATGGCGGAGGCAGACGCGAGGGCGGTAAAACATTA
TTTTAGAGTCCGTAGGGTTGTGTTCATGGCAGTGTCCTTACTTTCATGTC
AATTAATCAAGTTAGTATGTGATTTTGACGAGAAAAAAAATGCGTGCACG
CATACTGAGATCGCGCTGGGGGAACGGTCCCCCTGATTGCATTGCGGGCA
CGATTGTTTTTAATCTGGAACAGTGCCATATCGTCTCCTACGAAAGTGAA
AATTAATTAATGTCTTGAATTAGTATGAATTAATTTATTTTTTGGCGTTT
CATACTATTAATAGAATTTCTACCTACTATTAATACTACCTACT
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Coding sequence (CDS) from alignment at D-herbacea_F_contig100:423473..430416+

>mRNA_D-herbacea_F_contig100.222.1 ID=mRNA_D-herbacea_F_contig100.222.1|Name=mRNA_D-herbacea_F_contig100.222.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1908bp|location=Sequence derived from alignment at D-herbacea_F_contig100:423473..430416+ (Desmarestia herbacea DmunF female)
ATGAGGGCATCGAGGAGCCGAAGCTTTGAACGGTTCAGTTTCGGCGAGCC
CAGGGCAAGAAGTACGAGCTTGAACGAGCATGAAAATCGCCGCAGTTCCT
ATCATCGGGAACGAAGCGGCTTCGCAGCAGCTGCTCGAGGCAGAAATGAG
GGACGGCGCCTGCAGAGGGCGGGGGAACCACAGCAGGCTGTTTCTTCCGA
TGGATCAACCATTTTCGCCTTGAATGAGGGCATCGAGGAGCCGAAGCTTT
GAACGGTTCAGTTTCGGCGAGCCCAGGGCAAGAAGTACGAGCTTGAACGA
GCATGAAAATCGCCGCAGTTCCTATCATCGGGAACGAAGCGGCTTCGCAG
CAGCTGCTCGAGGCAGAAATGAGGGACGGCGCCTGCAGAGGGCGGGGGAA
CCACAGCAGGCTGTTTCTTCCGATGGATCAACCATTTTCGCCTTGAGGGC
GCCGGATGTCGTGTTCTGCGGAGACAAGTCTCGAGGCCGAAAACTGAGGG
TGGTTTGTTTGTCAGACACGCACGGAAAGCACCACTCCATGCGACACAAG
ATTCCAGGGGCGCCGGATGTCGTGTTCTGCGGAGACAAGTCTCGAGGCCG
AAAACTGAGGGTGGTTTGTTTGTCAGACACGCACGGAAAGCACCACTCCA
TGCGACACAAGATTCCAGACGGGGATATTCTTATCCATTGTGGAGACTTT
TCTACGAAGCTATATCAGCGCGACTTCGAGGCAGCGACGGAAGATTTCAA
CAGATTTTTAGGCTCCTTGGGGCACCGACACAAGACGGGGATATTCTTAT
CCATTGTGGAGACTTTTCTACGAAGCTATATCAGCGCGACTTCGAGGCAG
CGACGGAAGATTTCAACAGATTTTTAGGCTCCTTGGGGCACCGACACAAG
CTCGTCATCGCCGGCAACCACGAGATCGCCTTTAACTTCTACACAAGAAA
GCAGATACAGCGCCGCATAAGCTCGTCATCGCCGGCAACCACGAGATCGC
CTTTAACTTCTACACAAGAAAGCAGATACAGCGCCGCATAAGCAACGCGA
TATACCTGGAAGATTCGGGCACGACAGTGGAGGGGCTAAAATTTTACGGA
ACGCCATGGACCAACTCCTCGCAAATGCAACGCGATATACCTGGAAGATT
CGGGCACGACAGTGGAGGGGCTAAAATTTTACGGAACGCCATGGACCAAC
TCCTCGCAAATGGGATTCAGCTGTAGGGGAGCAGAGCTAGAGGGTGTATG
GTCTGCGATACCGGAGGGCGTTGATATACTATTGACGCACATGCCTCCGT
ATAACGTGCTGGACCTCGCGTTCGACCGTGGGAGTACGGCGAAGGACAAC
CCGTGTCCCGTGTGCGGGGAAACGCATCGAAGGGATTCAGCTGTAGGGGA
GCAGAGCTAGAGGGTGTATGGTCTGCGATACCGGAGGGCGTTGATATACT
ATTGACGCACATGCCTCCGTATAACGTGCTGGACCTCGCGTTCGACCGTG
GGAGTACGGCGAAGGACAACCCGTGTCCCGTGTGCGGGGAAACGCATCGA
AGCTTCGCGCATTGGGGAAGCTGGAGCCTGACCGAGCGCGTGGCGAGGTT
AAAGCCGAAGGTGCATGTGTTCGGTCACGTCCACAACAGCCACGGAATCG
TGAGGAGAGATGAAACGGTGTACATCAATGCCGCCCAAGACGAGATCCCG
CAGCCAATTTTCTTCGACATATGGGTCTGACTTCGCGCATTGGGGAAGCT
GGAGCCTGACCGAGCGCGTGGCGAGGTTAAAGCCGAAGGTGCATGTGTTC
GGTCACGTCCACAACAGCCACGGAATCGTGAGGAGAGATGAAACGGTGTA
CATCAATGCCGCCCAAGACGAGATCCCGCAGCCAATTTTCTTCGACATAT
GGGTCTGA
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