mRNA_D-herbacea_F_contig100.221.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig100.221.1
Unique NamemRNA_D-herbacea_F_contig100.221.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
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BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: D7G1P8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P8_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 1.090e-101
Identity = 177/260 (68.08%), Postives = 200/260 (76.92%), Query Frame = 3 
Query:  156 MFATLARAAARPASVGLMRRAVTV-------AAPKTAVTAS--RVRCASSLSKVIKAELEEEALVTIDEDVTSMVKDLKKKGITVKDEPGVSLVRIFGPGVGDEKVTVEFDCDVEGDGDDGWQDDLEDDS---IEGGAQQVQHEGDGEGGEGDEEDL--DGYRFTATITKGAKKMVLTGTATSHITVQGVRVNPANVEWDSSLYRGPAFHELDPDLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            M A LARAAARP S GL+RRA          + P  AV+++   +RCASSLS+V+KAE+EEE LV  DEDV SMVK+L KKGITVKDEPG+SLVR+FGPGVGDEKV+VEFDCDVEGDGDDGW+DDLEDDS   +E G QQ             E+D+   GYRFTATITKGAKKMVL+G+AT  I V G+R+NPANVEWD SLYRGP F+ELDPDLQD    YLKERNIDDDLAAFICMYADQKEQ EY NWL E+ KFV
Sbjct:    1 MLANLARAAARP-SAGLVRRAAAATTKCSSPSVPAAAVSSAPKNLRCASSLSEVLKAEIEEERLVAFDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGVGDEKVSVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQGKXXXXXXXXXXEDDMIGPGYRFTATITKGAKKMVLSGSATDTIAVHGIRINPANVEWDFSLYRGPDFNELDPDLQDALYDYLKERNIDDDLAAFICMYADQKEQNEYTNWLGEVAKFV 259
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BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: W2NNX2_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NNX2_PHYPR)

HSP 1 Score: 97.8 bits (242), Expect = 1.480e-19
Identity = 86/250 (34.40%), Postives = 133/250 (53.20%), Query Frame = 3 
Query:  156 MFATLARAAARPASVGLMRRAVTVAAPKTAVTASRVRCASSLSKVIKAELEEEALVTIDEDVTSMVKDLKKKGITVKDEPGVSLVRIFGPGVGDEKVTVEFDCD--VEGDGDDGWQDDLEDDSIEGGAQQVQHEGDGEGGEGDEEDLDGYRFTATITKGAKKMVLTGTATSHITVQGVRV--NPANVEWDSSLYRGPAFHELDPDLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            MFA +AR A    S+  +RR      P   + A + R  SS+S ++K E+EEE     +E+    ++   +K   +++ PG   V + G  VG + + ++F+    VE + D+ ++DD  +DS E            E        L G RFTA IT+  K M     A+S++TV+ +R   + A    D +LY GP F +L+ D+QD+F  +L ERNIDD+LA FI  +AD KEQ EY+ +L++   FV
Sbjct:   19 MFARVARVA----SLTAVRRT-----PSLGLRALQSREKSSISNLLKREIEEEKANCFEEEELENLRLKVEKVFKLQETPGCMDVVLQGT-VGADSIKIKFNAQDTVELEEDEDYEDDEGEDSTEMXXXXXXXXXXXE--------LPGIRFTADITRDNKGMQFDCVASSNLTVERLRYLKDFAKDAEDETLYFGPNFIDLELDVQDQFYNFLAERNIDDELAQFITQFADFKEQREYLAFLEDTETFV 250
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BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: K3WAS0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAS0_GLOUD)

HSP 1 Score: 97.4 bits (241), Expect = 1.520e-19
Identity = 83/242 (34.30%), Postives = 130/242 (53.72%), Query Frame = 3 
Query:  183 ARPASVGLMRRAVTVAAPKTAVTASRVRCASSLSKVIKAELEEEALVTIDEDVTSMVKDLKKKGITVKDEPGVSLVRIFGPGVGDEKVTVEFDCD--VEGDGDDGWQDDLEDDSIEGGAQQVQHEGDGEGGEGDEEDLDGYRFTATITKGAKKMVLTGTATSHITVQGVRVNP---ANVEWDSSLYRGPAFHELDPDLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            AR ASV + +R  +VAAP  A+ A ++R  SSL+ ++K E+EEE     + +    +     K  T+K+ PG   + + G  VG + + ++FD    VE       ++D  D+                   G+E++L G RF A +T+  + +     A+S++TV+ VR      AN E D+ LY GP F +++ D+Q++F  YL ER IDDDLA FI  YAD KEQ EY+++L+    F+
Sbjct:    6 ARAASVSMAKR-TSVAAP--ALGAFQLREKSSLTSLLKREIEEEKGNCFEGEELEELHAKMNKIFTLKETPGNMEIVLTGQ-VGTDSIRIKFDSQDVVE------LEEDYVDEDXXXXXXXXXXXXXXXXXXGEEDELPGIRFVADVTRDNQGLQFECVASSNLTVERVRFLSDFSANAEKDN-LYFGPNFADMELDVQEKFYDYLAERKIDDDLAQFITQYADLKEQREYLSFLESAETFI 236
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BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: A0A0W8C211_PHYNI (Mitochondrial acidic protein mam33 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8C211_PHYNI)

HSP 1 Score: 97.8 bits (242), Expect = 4.740e-19
Identity = 86/250 (34.40%), Postives = 133/250 (53.20%), Query Frame = 3 
Query:  156 MFATLARAAARPASVGLMRRAVTVAAPKTAVTASRVRCASSLSKVIKAELEEEALVTIDEDVTSMVKDLKKKGITVKDEPGVSLVRIFGPGVGDEKVTVEFDCD--VEGDGDDGWQDDLEDDSIEGGAQQVQHEGDGEGGEGDEEDLDGYRFTATITKGAKKMVLTGTATSHITVQGVRV--NPANVEWDSSLYRGPAFHELDPDLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            MFA +AR A    S+  +RR      P   + A + R  SS+S ++K E+EEE     +E+    ++   +K   +++ PG   V + G  VG + + ++F+    VE + D+ ++DD  +DS E            E        L G RFTA IT+  K M     A+S++TV+ +R   + A    D +LY GP F +L+ D+QD+F  +L ERNIDD+LA FI  +AD KEQ EY+ +L++   FV
Sbjct:   85 MFARVARVA----SLTAVRRT-----PSLGLRALQSREKSSISNLLKREIEEEKANCFEEEELENLRLKVEKVFKLQETPGCMDVVLQGT-VGADSIKIKFNAQDTVELEEDEDYEDDEGEDSTEMXXXXXXXXXXXE--------LPGIRFTADITRDNKGMQFDCVASSNLTVERLRYLKDFAKDAEDETLYFGPNFIDLELDVQDQFYNFLAERNIDDELAQFITQFADFKEQREYLAFLEDTETFV 316
[Close]
BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: A0A7S2XZ29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ29_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.280e-14
Identity = 74/215 (34.42%), Postives = 109/215 (50.70%), Query Frame = 3 
Query:  279 LSKVIKAEL--EEEALVTIDEDVTSMVKD----LKKKGITVKDEPGVSLVRIF--GPGVGDEKVTVEFDC--DVEGDGDDGWQDDLEDDSIEGGAQQVQHEGDGEGGEGDEEDLDGYRFTATITKGAKKMVLTGTATSHITVQGVRVNPANVEWDSSLYRGPAFHELDPDLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            L  +++ EL  E+E    I +D   + K     LK K   + D  G+S V +F   P  G EKV+V+F+C  ++ G  D G   +++++  EGG Q  +       GE +EE      F   + KG +K+V    A   I +  V +   + + D + Y GP F  L+ DLQD F  YL  R ID DLA +I M++D KEQ EY+ WL+    FV
Sbjct:   57 LGALLRRELNHEKEEATQIGQDFKDLQKSMEDRLKMKANVLGD--GMSTVEVFIKNPPPG-EKVSVQFNCVSEMPGGEDSG---EMDEEVAEGGEQGTEE------GEMEEEPPAFKPFMVKVEKGQQKLVFNLLAFDSIVIDSVYIEGGD-DSDMNQYLGPEFDSLETDLQDAFADYLAARGIDADLATWIVMFSDYKEQYEYMKWLETTAAFV 258
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BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: A0A8K1CD47_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD47_PYTOL)

HSP 1 Score: 83.6 bits (205), Expect = 1.370e-14
Identity = 81/253 (32.02%), Postives = 121/253 (47.83%), Query Frame = 3 
Query:  174 RAAARPASVGLMRRAVTVAAPKTAVTASR-------VRCASSLSKVIKAELEEEALVTIDEDVTSMVKDLKKKGITVKDEPGVSLVRIFGPGVGDEKVTVEFDCDVEGDGDDGWQD--DLEDD--SIEGGAQQVQHEGDGEGGEGDEEDLDGYRFTATITKGAKKMVLTGTATSHITVQGVR--VNPANVEWDSSLYRGPAFHELDPDLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            RAA R A+  L  R V  +A +  V  ++        R  SSL+ ++K E+EEE     + D    ++    K   +K+ PG   V + G   GD  + + FD           QD  +LE+D                         +L G RF A IT+  + +     A+S++T++ VR   N A      +LY GP+F +L+ DLQ+ F  YL ERN+DD+L+ FI  YAD KEQ EY+++L+   KFV
Sbjct:    4 RAAVRVAASALRPRVVVASASRPGVAMAKQSLCMLQTREKSSLTTILKREIEEEKGNCFEGDELEELQAKIAKVFAIKETPGDMEVTLEGEVKGDS-IRIRFDA----------QDSVELEEDYXXXXXXXXXXXXXXXXXXXXXXXXELPGIRFMAEITRENQGLQFECVASSNLTIERVRYLTNFAEDVDKDNLYFGPSFIDLELDLQESFYKYLAERNVDDELSQFIAQYADLKEQREYLSFLEHAAKFV 245
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BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: A0A482RRW5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRW5_9ARCH)

HSP 1 Score: 82.4 bits (202), Expect = 3.830e-14
Identity = 79/242 (32.64%), Postives = 122/242 (50.41%), Query Frame = 3 
Query:  189 PASVGLMRRAVTVAAPKTAVTASRVRCASSLSKVIKAELE-EEALVTIDEDVTSMVKDLKKKGITVKDEPG---VSLVRIFGPGVGDEKVTVEFDCDVEGDGDDGWQDDLEDDSIEGGAQQVQHEGDGEGGEGDEEDLD-GYRFTATITKGAKKMVLTGTATSH-ITVQGVRVNPANVEWDS-SLYRGPAFHELDPDLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            PA   +   +  V APK + +    + A  L +V+  E+E EE+   +D+++  +VK + K    ++ E G   V+L R F     +E + V+FD  V+   +D   +D +D+            G GE  E DE   + G  F  TITKG  K+V+  TAT   +  + +R  PA+   D    Y GP   +LD +LQ     +L++R ID DL+ F+  YA +KEQ EY+ WL+ LH F 
Sbjct:   29 PAFATIRTSSAHVLAPKASFSK---KSAPPLFEVLAGEIEHEESSYEVDQELVDIVKKVSKNW-KIQSEEGSAVVTLTRQFN----NEHIVVKFD--VQNVNEDVQFEDHDDEDH----------GAGEESEDDEMVNNFGIDFETTITKGKGKLVIHCTATDEDVVYRNLRYLPADKSNDDMEYYGGPTLEDLDENLQSAIDDFLEKRGIDRDLSFFVMAYAREKEQKEYLRWLRNLHDFA 250
[Close]
BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: A0A7S2EG99_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EG99_TRICV)

HSP 1 Score: 81.3 bits (199), Expect = 2.090e-13
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 3 
Query:  576 DEEDLDGYRFTATITKGAKKMVLTGTATS-HITVQGVRVNPANVEW-----DSSLYRGPAFHELDPDLQDEFTAYL-KERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            +E+D    RFT  +++  K M+L+ ++    + V G      + +      D SLY+GP F EL  DLQ  FT YL  E  +DDD+AAFI MYAD +EQ EYV WLK +H  V
Sbjct:  194 EEDDHVSVRFTVMVSRAGKTMLLSCSSQGGEVMVDGAAFVEGDADTLAGRVDESLYQGPEFPELSEDLQIGFTTYLVNECGVDDDVAAFIAMYADYREQIEYVQWLKGIHALV 306
[Close]
BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: A0A7S1GI20_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GI20_CYCTE)

HSP 1 Score: 75.9 bits (185), Expect = 1.200e-12
Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = 3 
Query:  561 EGGEGDEEDLDGYRFTATITKGAKKMVLTGTAT-SHITVQGVRVNPANVEWDSS-------LYRGPAFHELDPDLQDEFTAYLKER-NIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            +G +GD+E     +FT T+++  K MVL+  +  +   V+ V V   +VE   S       LY+GP F EL+ D+QD F ++++E   ID D+AAFI MY D KEQ +YV W++++   +
Sbjct:   42 DGDDGDDEPSPAIKFTLTVSRAGKTMVLSCLSEEARAVVKSVAVTMEDVETIHSTGRISDQLYQGPEFTELEGDVQDAFHSFVEEDCGIDTDVAAFIAMYVDYKEQMQYVRWMRQVQSIL 161
[Close]
BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Match: A0A7S3XN20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN20_HETAK)

HSP 1 Score: 75.1 bits (183), Expect = 1.870e-11
Identity = 39/98 (39.80%), Postives = 53/98 (54.08%), Query Frame = 3 
Query:  603 FTATITKGAKKMVLTGTATSHITVQGVR-VNPANVEWDSSLYRGPAFHELDPDLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFV 893
            F  T+ KG +++     A   + V  V+ + P         Y GP F +LDPDLQ  F  YL  R + DDL A++ MYAD +EQ EYV WL+ +  FV
Sbjct:  183 FAVTVAKGEERLRFYCRALDSVAVDAVQHIRPGQDPDAPESYEGPNFDDLDPDLQGAFLDYLAARGVGDDLGAWVVMYADYREQREYVGWLESVKGFV 280
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig100.221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1P8_ECTSI1.090e-10168.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W2NNX2_PHYPR1.480e-1934.40Uncharacterized protein n=6 Tax=Phytophthora paras... [more]
K3WAS0_GLOUD1.520e-1934.30Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0W8C211_PHYNI4.740e-1934.40Mitochondrial acidic protein mam33 n=1 Tax=Phytoph... [more]
A0A7S2XZ29_9STRA1.280e-1434.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CD47_PYTOL1.370e-1432.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A482RRW5_9ARCH3.830e-1432.64Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2EG99_TRICV2.090e-1342.48Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1GI20_CYCTE1.200e-1237.50Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3XN20_HETAK1.870e-1139.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig100contigD-herbacea_F_contig100:415333..423447 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score315.5
Seed ortholog evalue2.3e-83
Seed eggNOG ortholog2880.D7G1P8
Preferred nameMAM33
KEGG koko:K12812,ko:K15414
KEGG Pathwayko03013,ko03015,ko03040,ko05164,ko05168,map03013,map03015,map03040,map05164,map05168
KEGG ModuleM00406,M00430
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003676,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006091,GO:0006417,GO:0008150,GO:0008152,GO:0008494,GO:0009060,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015980,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045182,GO:0045333,GO:0045727,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0055114,GO:0060255,GO:0065007,GO:0070013,GO:0070129,GO:0070131,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:2000112
EggNOG free text desc.positive regulation of mitochondrial translation
EggNOG OGsKOG2536@1,KOG2536@2759
Ec32 ortholog descriptionMitochondrial glycoprotein
Ec32 orthologEc-12_006720.1
EC3.6.4.13
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko03019,ko03041
Exons5
Model size1319
Cds size744
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927414.1343467-UTR-D-herbacea_F_contig100:415332..4157521622927414.1343467-UTR-D-herbacea_F_contig100:415332..415752Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 415333..415752 -
1690790157.7934856-UTR-D-herbacea_F_contig100:415332..4157521690790157.7934856-UTR-D-herbacea_F_contig100:415332..415752Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 415333..415752 -
1622927414.2262526-UTR-D-herbacea_F_contig100:423292..4234471622927414.2262526-UTR-D-herbacea_F_contig100:423292..423447Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 423293..423447 -
1690790157.880167-UTR-D-herbacea_F_contig100:423292..4234471690790157.880167-UTR-D-herbacea_F_contig100:423292..423447Desmarestia herbacea DmunF femaleUTRD-herbacea_F_contig100 423293..423447 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927414.1462293-CDS-D-herbacea_F_contig100:415752..4158871622927414.1462293-CDS-D-herbacea_F_contig100:415752..415887Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 415753..415887 -
1690790157.817271-CDS-D-herbacea_F_contig100:415752..4158871690790157.817271-CDS-D-herbacea_F_contig100:415752..415887Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 415753..415887 -
1622927414.1565166-CDS-D-herbacea_F_contig100:416389..4165591622927414.1565166-CDS-D-herbacea_F_contig100:416389..416559Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 416390..416559 -
1690790157.8288693-CDS-D-herbacea_F_contig100:416389..4165591690790157.8288693-CDS-D-herbacea_F_contig100:416389..416559Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 416390..416559 -
1622927414.1677642-CDS-D-herbacea_F_contig100:418729..4188801622927414.1677642-CDS-D-herbacea_F_contig100:418729..418880Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 418730..418880 -
1690790157.8449225-CDS-D-herbacea_F_contig100:418729..4188801690790157.8449225-CDS-D-herbacea_F_contig100:418729..418880Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 418730..418880 -
1622927414.187567-CDS-D-herbacea_F_contig100:420044..4201511622927414.187567-CDS-D-herbacea_F_contig100:420044..420151Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 420045..420151 -
1690790157.8602076-CDS-D-herbacea_F_contig100:420044..4201511690790157.8602076-CDS-D-herbacea_F_contig100:420044..420151Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 420045..420151 -
1622927414.2108815-CDS-D-herbacea_F_contig100:423111..4232921622927414.2108815-CDS-D-herbacea_F_contig100:423111..423292Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 423112..423292 -
1690790157.8713188-CDS-D-herbacea_F_contig100:423111..4232921690790157.8713188-CDS-D-herbacea_F_contig100:423111..423292Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig100 423112..423292 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig100.221.1prot_D-herbacea_F_contig100.221.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig100 415753..423292 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig100.221.1

>prot_D-herbacea_F_contig100.221.1 ID=prot_D-herbacea_F_contig100.221.1|Name=mRNA_D-herbacea_F_contig100.221.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=248bp
MFATLARAAARPASVGLMRRAVTVAAPKTAVTASRVRCASSLSKVIKAEL
EEEALVTIDEDVTSMVKDLKKKGITVKDEPGVSLVRIFGPGVGDEKVTVE
FDCDVEGDGDDGWQDDLEDDSIEGGAQQVQHEGDGEGGEGDEEDLDGYRF
TATITKGAKKMVLTGTATSHITVQGVRVNPANVEWDSSLYRGPAFHELDP
DLQDEFTAYLKERNIDDDLAAFICMYADQKEQTEYVNWLKELHKFVG*
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mRNA from alignment at D-herbacea_F_contig100:415333..423447-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig100.221.1 ID=mRNA_D-herbacea_F_contig100.221.1|Name=mRNA_D-herbacea_F_contig100.221.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=8115bp|location=Sequence derived from alignment at D-herbacea_F_contig100:415333..423447- (Desmarestia herbacea DmunF female)
TTGAAATGATATTGAAGGCGTATGTATTGCCATCCACAGTCTAGTCCCAC
CGCGAACCAGGAACAGAGAAGAGCCACCAGCAATACTACTGACAGACCAG
AAGTAAGATACCTGAAAAACCTAGCGTACCTTGCTATTGAAGGAACATAC
TAGAGATGTTTGCTACTCTCGCTCGTGCGGCAGCGCGGCCTGCCTCGGTC
GGCCTGATGCGCAGAGCTGTTACGGTTGCTGCGCCCAAGACTGCTGTTAC
TGCCTCAAGAGTGCGATGTGCCAGCAGTCTCAGCAAGGTTATCAAGGCTG
AACTCGAAGAGGAGGCACTCGTTACTATCGATGAAGGTCAGTCCCACCTT
TAGAGGAAGCCATCGTATGGGCTATACTGCGTACGTGCACCATACATTTT
TTCGTGTATTGCGTATGCCTATATACAAGGTAGAGATTTTCTAGCCACGA
GTGGCCATGAACAATGGAGATCTGGGAACGGAGAACGGACTGGCTATGAT
ACTAACATACTTACTGGTACTACAACAGTACTACTGCGACTTTGCGCAAG
GATACGGTAATGGTTTGCTTTGTATTGATGTACAAGGGCGCCTGCCGGGC
AGTTCACTGCCCGGCAGGCTCGCAGGATTTTAGGGCGCATGCCAAGGGTG
TGAAAGGAAATCCGCAAGGTAACGTGTCGATGGCGAAAACGTCGTGCCTA
AAGAGTAAAGGACAATAATAGTAGTACTCGTACGTAAAACGTTTTTTCAA
TATCGTCAATTACGAAAGATGTCTTGAATTAACGTGTTTGCGCACAACAT
ATTTTGCTACCTAACGACCAGCTCGGGGGAATAACTACCGACCGCTAATC
TTATACCTGGTATGGTATGAACCAACCGAATATCGTCAATTACGAAAGTG
AAAATTAATTAATGTCTTGAATTAACGTGTTTGCGCATAACATATTTTGC
TACCTAACGACCAGCTCGGGGGAATAACTACCGACCGCTAATCTTATATG
AACCAAGCTCTGGCACAAATTTGCTAATTTGCCTAAGTTAGTAACATTTG
GAAGGCAAATATTTTTGGTTATCGTCATAGGTGGTAACGACCACGTTACT
GGGTTGGCCAGCGCTCCCGATTGGTCGAGTGCACCCGCCAAAAACAAGAA
ACGCGAGTGTTGTGCGTTGAGCGAGCCGCCAGCATGCAGCAGCAACAACA
GCAGTAGTAATACCTTGTTTTCCCTCGCAAGTCCCTATTGTTAGTTGTGT
TTGTGCCGCTGCTGCAGCATCTGCGCTGTGTTTACACGAAGCAACCCACC
ATGGAGAGAAGTCATGATGTCGGAATGGTGGGCAAGTATAGCCATCAGTT
TACAGCTGTTGCCTGTGCTACTACTGGCAGCGATGACCACAGCGATCATA
GTAGTAGTAGTAGCACAACAACACAGTAGGTGTACACGTACAGCAAGGCG
CAGGGCGACTGTGAGCAGCACGGTTTCACCACTGTGCTACTAGTCAGTGG
TGACTAGTAGCACAGTTGCAGTGGCTGTGCAGTGGTGGCTGGGATTCTCA
ACAGCCTCGAGCGCGGATGATGCACGTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGGTTGCATTGCTGTGTTGTCTCAAGGTTCAGCAAGGTTGTCTGTTT
TCACTGCGTTGTTAGATCTCTCTTTCGCGAGGTGACGAAGACAACCAACG
ACGAAGAAATCGACCTTGAGCTTGTCGCAGCCAGCCGTTTGAGGCCTTTG
TCGAAGAAAGGTGTTGCTGTGAATTGGGGCGTGCGAGAGGCGCTTGCTGG
TAATCGTCGCTGCGCAGTACCACGAGAAACAAACGCGATCCTCCTGTGTC
TCTTGCCTCCTGTGTCCTGTGCCCTCGGTGTTCAAACTTTTTTTGTCAGT
TGTTAGTTGTTTTTTTATGGCTCTTTGCTCAAGATCCATTATATAAGCAA
ATTTCAATTTCAACTACGCGGACCACGGAGTAACTTCATTTTACACTAGC
TTTACCGACGGAAACGCGCTTAGCAAAATATGTTACGCGCAAACACGTTA
TTAGAATGAATTAATTAATTTTTTAGGGTAGAGACGAAACCCAAGCAGGA
GACACTGCACTGGTATGATATCATCCCCAAATGGTGGGCGTTTCTATCTA
AGCGCAGTTTGCAGTTTGCCAATATTCCACGGTCTCCGATAGTAGTACAG
CAGCAGGACTACACTACAGTAGTACAGTACAGCACACATTACACAGTGGA
ATGATAAATGATGCCTGTAGAACAGTACAGGAGTAGTAATAGTAGTATAA
TAGTACGACCTGGTGTAGTAGAAGCACCCGTGGCTTCAGCAAAAAAGACG
ACACTATGCGGATTCGGACTCAGGCTACAGAGAATACAGAGCAACATTAT
GAGTACACAGCTTATTAAAGTGATTGCTGTTATTTTCGTTTTTTCCTGTT
TTTTTTTATGGTGTTGTGATGGTAGTGGTACAACAGTCATACGAGGAGTT
TTCTCCGCTACTTTGTTTGTATCATACCTCGCACTGCATTGAACTCGTGC
CGTTTCTCCTGTATGATAGCTAGCACTCCTTGAGCTATCACTTTGCCAGC
AGGCACTCTGCTGGTCACACTAGCCAGTCCTCCCTTCTTATGCATCCGCC
CCTACTTTCTTGTATAACATATTGTCTTTGTCTTCATTTATCTGTTGCTG
AAGCTGTGCGAGTTGGTCCAGCCGCAACCCTCACATTGTTTCTGCTGACT
GTCTCTCATGAACCACAGCGAATTACCGGCCGTATACGAACACAAAGGCA
TTGCTGCAATCGTCCAATCATCACATCACGCAGGTGCATAGCTATGCAAC
TAGCAGGAACTCTGCCGGGCACACCAGCCAGGCCTCCCTTCTTATGCATC
GACCCCTCCTAGGAACGTACTCATGATACTGCTACTGTTGTTGTAGAGCC
TGCTAAATACATACACGAACTCTGGCTCTCGTGGTGGACCCTTCGTATAA
TTTTGCATATCTTGGGGCAGAAAGGAGAGAAAACACCCGAATCTCCGCGG
CTCTTCTCGGCGGGCATCGCGATGCCACATCAATGCCATCTGTGTCCATA
CGCGATATCGGCACACTGCTACTAGTATATAATAAGGATTTGGTGCCCTG
TGAGCCATTTGGGACAATCGTATATAAGTTTATTTATCGCCTCTGGTATG
TTGTGCCCCTTTCACCACAGTCTATGATAGTCAGAGTTAACCCCCGCACC
CCCAATGCCCTGCATACGTCGAACTTGGACGGTATTTTGTCCTAAGATGT
GACCTCGATGGTGAAAGACCTGAAGAAGAAAGGGATCACAGTCAAGGACG
AGCCTGGAGTGTCGTTGGTTCGCATCTTCGGGCCGGGCGTCGGCGACGAG
AAGGTGCGTTTATCTCCGTTCGCCTATTTCCTACTTCGAAGTATTACGGT
ATATTCGTATATAATACGATCACTGATAATACCTACCAGGTACATTTTAA
TGTTCTGTCGTCGGCGCATCGATCAGCGCGCCTGCATGTTGAACGTACAT
TATTATTTTTTGTGGTATTTTCTGTGGTGTTTTCTAGGTTCAAATACATC
GAGTTGTGGCGTCCAAACTGGTTCCGGACCCAGGGCTTGAGATGAAGTTT
GATATTTGTGTAGGTAGTTTATTGGTACAGTCTGTACATACTGCTACGTA
CTTTTACGTACTATACCTGTTGTACTACTGTACTCCGAAACACTGGGATG
GTTGGGGATTTGCGTGTGTGGTGGAGTTCACTTGCACATCGTGGTCGCCG
AGCTCGCGCGTTGTATAGGCAAAATCTAAAGGGCTCAGACAGGGCGTACG
AAGCGTCCATTTTCGACGAGGAGTCGGGTCTATGCAAAAGCTGAATATAG
CGTATTTTACGCACCTGCTGTACACAATTGTACGCCCATGTCCATCATCA
CGTGGCGAGGACCGCACGTGCACTACATCACACTACGACTCCTACAGCAG
CAGTAGTGCGCGACGATACAACAATATAATAGTACAACAACAGTAGTTCA
TCGTTTGGAGATCCTGAATCGCAGAAGATATTCTTAAACTGCACTGAACT
GGCCGTTATCATATGGCTCGCAGAAGTTCAAATTGCTCACATACATGATA
AACGCATAACTTTCTGGTACAAAGCCGTAGAAGCCGTTCCTTCTCAATAT
TGTATTTCTTGGGTTAGACGCTGAATATCTTGAGGAGCTGCTAAGCTCGA
CACAAATTTCGTAGTGCATGAAATATTATGAGTTCGGCAATCAAGGTATC
AATCGAAGGGAGCAAACGGGACGAACCCTTGCGACCACGGTCCGCTCCGA
CAGGTAGCGGGTTACAAGATAATTACGACGGGAAATAACCTGACTCGGCC
TATGACTCGACCGCTATGATACGAGTCCAACATTGTTAAAACGTTATGAT
ACCATTAGTTTGTTAACTCTGACGTTCGCTCTCCGCATGCACGTGATGAT
GTTGTCGACATTCTTTGGCGTTCACGTGTGTAACGCGGCGCTGGCGCCGA
CGTCGTCGTCATGGCAGGTGACGGTAGAATTCGATTGTGACGTGGAAGGG
GACGGAGACGACGGATGGCAGGATGATTTGGAAGACGATTCTATCGAGGG
GGGGGCACAACAGGTCCAGCACGAGGGGGACGGGGAGGGGGGCGAGGGAG
ACGAGGAGGACTTGGACGGTCCAGGCGAGACAAGCGTATTCTTGGTATTC
CCCTACGAGTACATTATTTCGTCCTCCTCCTTTTATTTTGAGATGCGTGC
GCGAGTGAGGGTCCGAGTATCATCGGGCATGAAAAATGCTAGAAATTGCG
AGTCTCCAGCGGTGCGGGAAGCTAGTATAAATATGCAAGGTTTCTGCGGC
TGACGTCGCAACGCTCAAATGGAGCGAGTCGCCAAGGCAATAATAGACAT
ATAGCTATAGATAGATGGTGATCGAGTGTGGAGTGTGGGAAGCAGGGCTG
CTGAGACAGTTGGGGGTGCCCATGTGGGCAACAGAGCTATCAAACGTACT
AAACTACTCGATTCATACCGCGAAAAGAGAATAGAAATGTGGCAAAATAC
GTATTATGTTATTATAGGAAAAATACGTATGTTATTATAGGCAAAATACC
TATGATATGTTACAGGAAAAATCGAAGATATTATTTTTACTGTACAAAAC
GTGGAATAGTAAATATGCAACACCCACAGCTCAGCACCAAACGCGACACA
CTACACACAGCAGCAACAGGAAATACCAAGAACCAAGAAGCTCCAAACGA
AAAAACAGCACTGACTACGTACTACACTACAACAGACTATTATTGAGATA
TACGGTATATTTTGAAGAGACGGGGGTTGGTTGGTGCGACTGGAAGAAGA
GTACTGGCTATGTTAATGGAGGACGCAGTTAATAATGGTATGAGATGCGA
CAGATGTAGAGCAGATGTCGCAACGTCCGTAAAAATACAAATAGCAAAGT
GAGAAATAATCCTGGTTTCTGCGGCTCAATCATATGATGAGAGCGAGTCG
CCAAGGCCAATAGACATACACATAGCTGGTGAGATCGAGTGTGGAGTGTG
AGAAGCAGGACTGCTAAGACAGTTGGGGGTGCTCTGGCGAACAAAGTTAG
GTACTGTATGTACTCGTATCATACCGCAAAAACAACCTTGTAGCAAAATA
CGTACTTCGTATGAACAGAAAAATAGAAGATAGAAAATATGAAAAAATAA
TGCACCACGCACAGCTCCGCACCCGACTGCCACTCGTACACAAAGCAACA
ATATTTAGGATGTGCCAAACTCCAAAGAAAACAATAACAATACTGACTAC
CACGGCAGACTATGATTTAGATATATATGGGAGGGTTGGCTGCTGTGACT
GGAAGAGTGCTGCAGCCATGGCTATAATGGTATGTATGAGATGCGATAGT
AGAATAATAGTAGAGCAAAATGACGGCAAAAAAGCAAAGTGCAAAATGGG
AAATAATAATATACCGAGCAAGTTGTTATTTTCTACGGTAATTGCAAAAT
AATTGCAGATCGTGCAGCACGCATACCATCATCTTAATTGTATTAAAAGC
AGTGTGGGGTCAGTGCAGTGGCACGAAATAAATGATGCGCTCATCACGTG
GATCGGGACGGGTGAGCTGTGAGGAAAAAGCTAAGCTACATGAAACAAAC
GCTGAACGAACACAGAACCGCAGCTCAATAAAACGCAACAACAAACGACA
ACTGTTGCAGCACGAAGATCACCAGAAATAACGGTAGCACAGACACGGAT
TACGTGCTTCAGGGTGTAGAGACGATGCGAGGAGGGCCAGCTAGTGTGGC
TTGCAGCGTGCTGGCTATAGAATAGAGAGTGTTGCCACCGCGTCAAGCTG
TGAGAGTATAGTAGTAGTAGATAGTAGATACTGTACGATTAGCGAAAACG
GAAAAAAAGAAAACGGACGAACAACATATCCGAGCGGAGATGTAAAGTGT
CCAGCTGCAACCAATGAGAAATTTGGGCAAATGTTTCGGGGTGGCCGATG
GGGGCGCGCGGAAAATGCTGTGCCGTCAGGCGCTCTCTCGTCGATTATGA
GAACAACGAATAATGGAGCGCTGTCAGCAAATTGTTAACAGGTCTATGGC
AATGTTCGAGCTACCTTGCTAAAAAGAAATTGCAAATTGCCCATCTGCAG
AGAGCGGGAGGTCATCCCAGTCGCTCCCGCAAGTTGCGTCACGGGACAGT
AGTAGTGTAGTAGTACATGCTGCAGTGCCACTGCTTACTACTTACTGTGA
TATCCGTTATATTTCGCTCGCCTCGCCCTTTGTCGTCATAACTCATATTG
TGTTTTGTGTGATATTTTCGGTTTGCTGGCGTACTCAGGGTACCGCTTCA
CAGCAACGATCACCAAGGGGGCGAAGAAGATGGTTTTGACAGGCACGGCC
ACAAGCCACATCACCGTGCAGGGCGTCCGTGTCAACCCAGCAAACGTAGA
GTGGGATTCTTCCCTTTACAGGGGTCCAGCTTTTCACGAGCTTGACCCCG
ACTTGCAGGTGCGTGCTAGACATAGAGCCCGCGCGAAAAAAACTGTTTTC
TGCTATTCATCTTTTGTCGTTTTTTTAACGGCATTCCGTTCCATGGTGAT
GACTCGAGAGGGCGGAAGAGCAACACTGGATCGGCTTCATACTTTGATGC
GTGCTTCTCTCTCTCTCTCTACAACTCGTTTGTGATTAAAGAAAAGTTGT
GTGTGCGCAATTCGGCCCGTGCTGTTGCGTAGTTCAGCAACTCGTCGGTT
TGATGTGTCCCGATATAACCGCAATCAATGGATGTGCAGTTTTACCTCTT
CACGAATCAGTGCAGCAGTGTAGCATCACATTTTTTTGTGTTCATCCTCC
GGTGATTGGGTAGAAACACAGTCTGAGTCGACCACACGTCTACAGCAAGC
TTTGCATATGTATACCGACTTAACCCGACATCACTGCCTCCAGCATCACA
ATAGCTGCCTTGTCCCGTTCATGGTTACGTTTCGCACAATGTTTGTGTGT
GTTTTTGCAGGACGAGTTTACTGCCTACTTGAAGGAGCGCAACATTGACG
ACGACTTGGCCGCCTTTATCTGCATGTACGCGGATCAAAAGGAGCAAACG
GAATACGTAAACTGGTTGAAGGAGTTACACAAGTTCGTAGGGTAAGCCCC
TGCAGCAGGGGCTGATAAGGCGTTGCGAAGCCCAGGAAGAGATCTGGCAT
GCACACGCGGCATCAAGAACAGTGATGCCCACCGTTAGGTTTTAACGAGC
AGCACCAGGGGGTGGAGAAAAACATATATTGGCACCTCGGGCAAGCACAT
AATGAATCAACTTAAAAGTGCGGTCGTATCGATGCTGGGAAAGAAACGGC
GAGTAAGGCAGCGGGAGGGGGCTCCGTGAAGAAACTGTGGCTTGAACTCA
TGGGTGTGGTGGTACTACCGGTGCCATCTATCGCCGTTTTTCCTCAAGTG
GTGTGAATACATTCACCTTTGCATGCAATACCCCGATCGTACATGTGTGT
GTGTGTGTGTTTATGTATGTGTTGGTCTTCACATTAAAATCGTCCTTCCT
ACCCTACGACATCCA
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Coding sequence (CDS) from alignment at D-herbacea_F_contig100:415333..423447-

>mRNA_D-herbacea_F_contig100.221.1 ID=mRNA_D-herbacea_F_contig100.221.1|Name=mRNA_D-herbacea_F_contig100.221.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1488bp|location=Sequence derived from alignment at D-herbacea_F_contig100:415333..423447- (Desmarestia herbacea DmunF female)
ATGTTTGCTACTCTCGCTCGTGCGGCAGCGCGGCCTGCCTCGGTCGGCCT
GATGCGCAGAGCTGTTACGGTTGCTGCGCCCAAGACTGCTGTTACTGCCT
CAAGAGTGCGATGTGCCAGCAGTCTCAGCAAGGTTATCAAGGCTGAACTC
GAAGAGGAGGCACTCGTTACTATCGATGAAGATGTTTGCTACTCTCGCTC
GTGCGGCAGCGCGGCCTGCCTCGGTCGGCCTGATGCGCAGAGCTGTTACG
GTTGCTGCGCCCAAGACTGCTGTTACTGCCTCAAGAGTGCGATGTGCCAG
CAGTCTCAGCAAGGTTATCAAGGCTGAACTCGAAGAGGAGGCACTCGTTA
CTATCGATGAAGATGTGACCTCGATGGTGAAAGACCTGAAGAAGAAAGGG
ATCACAGTCAAGGACGAGCCTGGAGTGTCGTTGGTTCGCATCTTCGGGCC
GGGCGTCGGCGACGAGAAGATGTGACCTCGATGGTGAAAGACCTGAAGAA
GAAAGGGATCACAGTCAAGGACGAGCCTGGAGTGTCGTTGGTTCGCATCT
TCGGGCCGGGCGTCGGCGACGAGAAGGTGACGGTAGAATTCGATTGTGAC
GTGGAAGGGGACGGAGACGACGGATGGCAGGATGATTTGGAAGACGATTC
TATCGAGGGGGGGGCACAACAGGTCCAGCACGAGGGGGACGGGGAGGGGG
GCGAGGGAGACGAGGAGGACTTGGACGGTGACGGTAGAATTCGATTGTGA
CGTGGAAGGGGACGGAGACGACGGATGGCAGGATGATTTGGAAGACGATT
CTATCGAGGGGGGGGCACAACAGGTCCAGCACGAGGGGGACGGGGAGGGG
GGCGAGGGAGACGAGGAGGACTTGGACGGGTACCGCTTCACAGCAACGAT
CACCAAGGGGGCGAAGAAGATGGTTTTGACAGGCACGGCCACAAGCCACA
TCACCGTGCAGGGCGTCCGTGTCAACCCAGCAAACGTAGAGTGGGATTCT
TCCCTTTACAGGGGTCCAGCTTTTCACGAGCTTGACCCCGACTTGCAGGG
TACCGCTTCACAGCAACGATCACCAAGGGGGCGAAGAAGATGGTTTTGAC
AGGCACGGCCACAAGCCACATCACCGTGCAGGGCGTCCGTGTCAACCCAG
CAAACGTAGAGTGGGATTCTTCCCTTTACAGGGGTCCAGCTTTTCACGAG
CTTGACCCCGACTTGCAGGACGAGTTTACTGCCTACTTGAAGGAGCGCAA
CATTGACGACGACTTGGCCGCCTTTATCTGCATGTACGCGGATCAAAAGG
AGCAAACGGAATACGTAAACTGGTTGAAGGAGTTACACAAGTTCGTAGGG
TAAGACGAGTTTACTGCCTACTTGAAGGAGCGCAACATTGACGACGACTT
GGCCGCCTTTATCTGCATGTACGCGGATCAAAAGGAGCAAACGGAATACG
TAAACTGGTTGAAGGAGTTACACAAGTTCGTAGGGTAA
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