mRNA_D-herbacea_F_contig10.160.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_D-herbacea_F_contig10.160.1
Unique Name	mRNA_D-herbacea_F_contig10.160.1
Type	mRNA
Organism	Desmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)

Homology

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: D7FP82_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP82_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 6.480e-105
Identity = 229/603 (37.98%), Postives = 284/603 (47.10%), Query Frame = 1

Query:    4 AKRWVMRTPSGLPLCPMCHKELGFCPHSPIFRRDGSRS---------------SGIAAMLGGASLAAVALQARERAVQGARQQMLPPPGGTKRRSIQENSEASRKGRRCEGSQDKVKLSCTERQPRTSARLAAHGTHASTTNAGKXXXXXXXXXXXXXXXXXXEGEGEACAXXXXXSGGAVVTDNDEHLLRYPGFHRNDVGKECIGCYTAEKIMFSFGCEERQRE------GAASQAQEKSDEAEGDAQDPPTAADGSTTGADVSVSHVMCLDCFRVFVQSRVNERQLLAAREFDGYTVGCPMGCADSFVNPVCFEEILGAEFMVKYRRFSALHLASYMRIVWCPGCHCGVVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPRIIPLAPEISAPHYGLSLWGWWEWWNGADLPQLHPQXXXXXXXXXXXXX-AVSPNN--CTSCPGCHESLCLSCGALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDP-----------------STGTKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGPCQLGHWSSDPMLNRAYNAKQYASTSVREACTIS 1689
            A  W+ RTPSGLPLCP C+KELGFCPHSP  R +G+R+               SG A    GA   A+ +    ++ + A  +   P  GTKRR        + +G+   G Q +V L  ++  P  SA     G                               G+   X    +  AV  D    LLR+PGF  N  G++CI CY    IM +F CE R+ +       AA + Q  S E+ G   +    A  S  G DV   HVMC+DCF V+V+SRV+ER L+ +R+FDGYTVGCPMGCADSF++P CFEE++GAEFMVKYRRF+A+HLAS++R+VWCPGCHCGVVPSA                                        + PL P +     G                     XX            A  P    C  CPGC  SLC+ C  LHA  V CADA                                              + TK+CP CHVPIFK+GGCNHM+CS C  EFCWLHLTEWV GG CQ GHWSS+P LNRAYNA++ A    R+ CTIS
Sbjct:    2 ANSWINRTPSGLPLCPTCNKELGFCPHSPTLR-EGARAGDKEETGAAHSAHTGSGEAVPDTGAVPLALRINEAGQSHESASPEER-PKHGTKRRPS-----TALQGK---GKQRRV-LVQSKGTPALSAPDEEDGVRIRRNPPRSTRTREEECKTRPKKRASLASSGDXXXXSGATNDAAV--DEKTRLLRFPGFEANGTGQQCISCYEVAPIMVNFACEGRREQEAEKARAAAERQQGSSRESTGAGAEAVNTAVASRLGMDVP--HVMCVDCFCVYVESRVSERMLVTSRDFDGYTVGCPMGCADSFIDPSCFEEVMGAEFMVKYRRFAAIHLASHLRVVWCPGCHCGVVPSAAAAAAAGARRSS----------------------------VNPL-PNLQQEQMGXXXXXXXXXXXXXXXXXXXXXXXAERQEEEGGDGTAARPRGSFCIGCPGCQASLCMLCRELHAPGVSCADAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDDSPTKRCPGCHVPIFKDGGCNHMKCSRCHFEFCWLHLTEWVEGGECQRGHWSSNPALNRAYNAQRMARE--RQRCTIS 558

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: A0A8J1XJ95_OWEFU (E3 ubiquitin-protein ligase parkin n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XJ95_OWEFU)

HSP 1 Score: 102 bits (253), Expect = 1.580e-19
Identity = 86/305 (28.20%), Postives = 108/305 (35.41%), Query Frame = 1

Query:  733 SVSHVMCLDCFRVFVQSRVNERQLLAAREFDGYTVGCPMGCADSFVNPVCFEEILGAEFMVKYRRFSALHLASYMRIVWCPGCHCGVVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPRIIPLAPEISAPHYGLSLWGWWEWWNGADLPQLHPQXXXXXXXXXXXXXAVSPNNCTSCPGCHESLCLSCG-ALHAAEVDCADAHIDGGHIEDEDGVGGSRTVA-RNGARNDPSTGTKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGPCQLGHWSSDPMLNRAYN 1641
            +V H+MCL+CFR +  S++NER   A  E+ GYTV CP GC DS +       I+G E   +Y++F A       R V CP   CG                                                               GW    +G  L    PQ                        GC    C  C  A H  E D A   I  G I   +    S+T   R  + +     TK CP+C  P+ + GGC HM C  C+HE+CWL L EW     CQ  HW  D  LN   N
Sbjct:  212 AVQHIMCLECFREYCLSKLNERGFQAHPEY-GYTVACPAGCEDSLIQESHHFRIMGNEQYSRYQQFGAEEWVLKERGVLCPAPGCGQ--------------------------------------------------------------GWITNDSGRRLQCSEPQ------------------------GCGMVFCAECREAYHEGECDLAS--IQQGAIASINSADLSQTQQDRLQSLDTIHKTTKSCPKCSTPVERSGGCMHMHCIRCKHEWCWLCLIEW--NSECQSDHWFGDNPLNNPLN 425

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: UPI001E8C9DB1 (E3 ubiquitin-protein ligase parkin n=1 Tax=Micropterus dolomieu TaxID=147949 RepID=UPI001E8C9DB1)

HSP 1 Score: 79.7 bits (195), Expect = 5.740e-13
Identity = 75/300 (25.00%), Postives = 103/300 (34.33%), Query Frame = 1

Query:  733 SVSHVMCLDCFRVFVQSRVNERQLLAAREFDGYTVGCPMGCADSFVNPVCFEEILGAEFMVKYRRFSALHLASYMRIVWCP--GCHCGVVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPRIIPLAPEISAPHYGLSLWGWWEWWNGADLPQLHPQXXXXXXXXXXXXXAVSPNNCTSCPGCHESLCLSC------GALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDPSTGTKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGPCQLGHW 1608
            S  HV+CLDCFR + Q+R+NERQ +      GY++ C +GC DS V  V    ILG +   +Y+++ A      +  + CP  GC  G+VP                                               PE S                                             C    GC    C  C      GA H+           G  +E+E  + G    A      +    TK+CPQC VP+ + GGC HM+C +C+ E+CWL    W     C   HW
Sbjct:   53 SERHVICLDCFRRYCQTRLNERQFVF-HPVIGYSLPCAVGCVDSLVKEVHHFRILGDDQYGRYQQYGAEECLRMIGGLMCPSPGCGAGLVP-----------------------------------------------PEDSR-----------------------------------------RVECDRQLGCGFVFCKDCREGYHEGACHSEPAPPTGEASQGFVVEEEASLRGRWDQASLLLLQES---TKRCPQCSVPVERNGGCMHMQCPLCRAEWCWLCGVPW--NRDCMGNHW 258

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: A0A8D8PZ50_9HEMI (RBR-type E3 ubiquitin transferase n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8PZ50_9HEMI)

HSP 1 Score: 79.7 bits (195), Expect = 2.290e-12
Identity = 44/113 (38.94%), Postives = 53/113 (46.90%), Query Frame = 1

Query: 1294 SCPGCHESLCLSCGALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDPSTGTKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGG-------PCQLGHWS 1611
            +C GC  S C  CG  + A  DC           D+     S T       N  S  TK CP+CH+ I K GGCNHM+C  C+HEFCW+ L +W   G       P Q  HWS
Sbjct:  277 TCSGCATSFCFQCGIEYHAPTDCVVIKKWLTKCADD-----SETA------NYISAHTKDCPKCHICIEKNGGCNHMQCYHCKHEFCWMCLGDWKQHGSEYYRVFPIQSEHWS 378

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: A0A8C7XBS9_9TELE (RBR-type E3 ubiquitin transferase n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7XBS9_9TELE)

HSP 1 Score: 78.2 bits (191), Expect = 2.330e-12
Identity = 71/300 (23.67%), Postives = 107/300 (35.67%), Query Frame = 1

Query:  733 SVSHVMCLDCFRVFVQSRVNERQLLAAREFDGYTVGCPMGCADSFVNPVCFEEILGAEFMVKYRRFSALHLASYMRIVWCP--GCHCGVVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPRIIPLAPEISAPHYGLSLWGWWEWWNGADLPQLHPQXXXXXXXXXXXXXAVSPNNCTSC-PGCHESLCLSCGALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDPSTG-----TKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGPCQLGHW 1608
            S  HV+CLDCFR++ QSR++ERQ +      GY++ C  GC DS +  +    +LG +   +Y++++       M  + CP  GC  G++PS                                      P R +    ++     G                                        C  C    H+  C +C A    +V       + G + DE+        +R G     S       TK CP C VP+ + GGC HM C++CQ ++CWL    W     C   HW
Sbjct:   66 SERHVICLDCFRLYCQSRLSERQFVHHAAI-GYSLPCAAGCEDSLIKELHHFRVLGDDQYARYQQYATEECLLKMGGLMCPAPGCGAGLLPS-------------------------------------DPCRRVECERQLGC---GFVF-------------------------------------CRECREAFHQGECRACQAPPMGDV-------EQGFVVDEE-------ASRRGRWEQASQRLIQEMTKPCPNCSVPVERNGGCMHMHCALCQADWCWLCGVTW--NRECMGNHW 271

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: UPI00106E9BB9 (E3 ubiquitin-protein ligase parkin n=1 Tax=Perca flavescens TaxID=8167 RepID=UPI00106E9BB9)

HSP 1 Score: 78.6 bits (192), Expect = 2.840e-12
Identity = 73/292 (25.00%), Postives = 105/292 (35.96%), Query Frame = 1

Query:  742 HVMCLDCFRVFVQSRVNERQLLAAREFDGYTVGCPMGCADSFVNPVCFEEILGAEFMVKYRRFSALHLASYMRIVWCP--GCHCGVVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPRIIPLAPEISAPHYGLSLWGWWEWWNGADLPQLHPQXXXXXXXXXXXXXAVSPNNCTSC-PGCHESLCLSCGALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDPSTGTKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGPCQLGHW 1608
            HV+CLDCFR + Q+R+NERQ +      GY++ C  GCADS +  +    ILG +   +Y+++ A      +  + CP  GC  G++PS                                                                 +G    +   +                   C  C    HE  CL+  A   AE          G +  E+    +R  A +      ST  K+CP+C VP  ++GGC HMRC +CQ E+CWL    W     C   HW
Sbjct:  106 HVICLDCFRGYCQTRLNERQFVYDPVI-GYSLPCAAGCADSLIKELHHFRILGDDQYGRYQQYGAEQCLQLIGGLQCPSAGCGAGLLPS-----------------------------------------------------------------DGGRRVECDRRLGCGFVF------------CRLCRERYHEGACLTAQAPPTAEA-------AQGFVSGEEASLRARWDAASLLLVQEST--KRCPRCSVPTERDGGCMHMRCPLCQAEWCWLCRVSWNT--ECMGNHW 308

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: A0A3B3IP36_ORYLA (E3 ubiquitin-protein ligase parkin n=7 Tax=Oryzias TaxID=8089 RepID=A0A3B3IP36_ORYLA)

HSP 1 Score: 80.1 bits (196), Expect = 2.870e-12
Identity = 72/300 (24.00%), Postives = 107/300 (35.67%), Query Frame = 1

Query:  733 SVSHVMCLDCFRVFVQSRVNERQLLAAREFDGYTVGCPMGCADSFVNPVCFEEILGAEFMVKYRRFSALHLASYMRIVWCP--GCHCGVVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPRIIPLAPEISAPHYGLSLWGWWEWWNGADLPQLHPQXXXXXXXXXXXXXAVSPNNCTSC-PGCHESLCLSCGALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDPSTG-----TKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGPCQLGHW 1608
            S  HV+CLDCFR++ QSR+NERQ +      GY++ C  GC DS +  +    +LG +   +Y++++       M  + CP  GC  G++PS                                      P R +    ++     G                                        C  C    H+  C +C A    +V       + G + DE+        +R G     S       TK CP C VP+ + GGC HM C++CQ ++CWL    W     C   HW
Sbjct:  259 SERHVICLDCFRLYCQSRLNERQFVHHAAI-GYSLPCAAGCEDSLIKELHHFRVLGDDQYARYQQYATEECLLKMGGLMCPAPGCGAGLLPS-------------------------------------DPCRRVECERQLGC---GFVF-------------------------------------CRECREAYHQGECRACQAPPMGDV-------EQGFVVDEE-------ASRRGRWEQASQRLIQEMTKPCPNCSVPVERNGGCMHMHCALCQADWCWLCGVPW--NRECMGNHW 464

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: UPI0018D0ECDA (potential E3 ubiquitin-protein ligase ariadne-2 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0ECDA)

HSP 1 Score: 80.1 bits (196), Expect = 3.090e-12
Identity = 43/113 (38.05%), Postives = 54/113 (47.79%), Query Frame = 1

Query: 1297 CPGCHESLCLSCGALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDPSTGTKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGP--CQLGHWSSDPMLN 1629
            C GC    C SCGA H A  DCA          D+     S T       N  S  TK CP+C + I K GGCNHM+C  C+H+FCW+ L +W   G    +   +  DP L+
Sbjct:  231 CAGCEHLTCFSCGAPHHAPTDCATIRRWLTKCADD-----SETA------NYISAHTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWVCLGDWKTHGSEYYECSRYKEDPNLS 332

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: UPI001487470E (E3 ubiquitin-protein ligase parkin-like isoform X2 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=UPI001487470E)

HSP 1 Score: 77.0 bits (188), Expect = 3.280e-12
Identity = 70/294 (23.81%), Postives = 103/294 (35.03%), Query Frame = 1

Query:  733 SVSHVMCLDCFRVFVQSRVNERQLLAAREFDGYTVGCPMGCADSFVNPVCFEEILGAEFMVKYRRFSALHLASYMRIVWCP--GCHCGVVPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETPPRIIPLAPEISAPHYGLSLWGWWEWWNGADLPQLHPQXXXXXXXXXXXXXAVSPNNCTSCPGCHESLCLSCGALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDPSTGTKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGPCQLGHW 1608
            S  HV+CLDCF  + Q+R++ERQ ++     GY++ C  GC DS +  +    ILG +   +Y+++ A         + CP  GC  G++P                                                                  +G    Q   Q             A            HE  CL+  A   AE         G  +EDE  + G    A      +    TK+CPQC VP+ ++GGC HM+C +C+ ++CWL    W     C   HW
Sbjct:   31 SERHVICLDCFHRYCQTRLSERQFVS-HPVIGYSLPCAAGCIDSLIKELHHFRILGEDQYGRYQQYGAEECLLMNGGLMCPSPGCGAGLIPP-----------------------------------------------------------------DGTSRVQCERQLGCGFVFCKYCREAY-----------HEGACLTERAPPTAEAS------QGFMVEDEASLRGRWDRASLLLLQES---TKRCPQCSVPVERDGGCMHMQCPLCRADWCWLCGVSW--NRDCMGNHW 236

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BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Match: H9J1U6_BOMMO (RBR-type E3 ubiquitin transferase n=3 Tax=Bombyx TaxID=7090 RepID=H9J1U6_BOMMO)

HSP 1 Score: 79.7 bits (195), Expect = 4.090e-12
Identity = 43/112 (38.39%), Postives = 53/112 (47.32%), Query Frame = 1

Query: 1297 CPGCHESLCLSCGALHAAEVDCADAHIDGGHIEDEDGVGGSRTVARNGARNDPSTGTKQCPQCHVPIFKEGGCNHMRCSMCQHEFCWLHLTEWVVGGP--CQLGHWSSDPML 1626
            C GC    C SCGA H A  DCA          D+     S T       N  S  TK CP+C + I K GGCNHM+C  C+H+FCW+ L +W   G    +   +  DP L
Sbjct:  230 CKGCESLTCFSCGAPHHAPTDCATIRQWLTKCADD-----SETA------NYISAHTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPNL 330

The following BLAST results are available for this feature:

BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot

BLAST of mRNA_D-herbacea_F_contig10.160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FP82_ECTSI	6.480e-105	37.98	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A8J1XJ95_OWEFU	1.580e-19	28.20	E3 ubiquitin-protein ligase parkin n=1 Tax=Owenia ...	[more]
UPI001E8C9DB1	5.740e-13	25.00	E3 ubiquitin-protein ligase parkin n=1 Tax=Micropt...	[more]
A0A8D8PZ50_9HEMI	2.290e-12	38.94	RBR-type E3 ubiquitin transferase n=1 Tax=Cacopsyl...	[more]
A0A8C7XBS9_9TELE	2.330e-12	23.67	RBR-type E3 ubiquitin transferase n=1 Tax=Oryzias ...	[more]
UPI00106E9BB9	2.840e-12	25.00	E3 ubiquitin-protein ligase parkin n=1 Tax=Perca f...	[more]
A0A3B3IP36_ORYLA	2.870e-12	24.00	E3 ubiquitin-protein ligase parkin n=7 Tax=Oryzias...	[more]
UPI0018D0ECDA	3.090e-12	38.05	potential E3 ubiquitin-protein ligase ariadne-2 n=...	[more]
UPI001487470E	3.280e-12	23.81	E3 ubiquitin-protein ligase parkin-like isoform X2...	[more]
H9J1U6_BOMMO	4.090e-12	38.39	RBR-type E3 ubiquitin transferase n=3 Tax=Bombyx T...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-herbacea_F_contig10	contig	D-herbacea_F_contig10:872261..879741 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90	2022-09-19
OGS1.0 of Desmarestia herbacea DmunF female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	340.1
Seed ortholog evalue	1.9e-90
Seed eggNOG ortholog	2880.D7FP82
Preferred name	PARK2
KEGG ko	ko:K04556
KEGG Pathway	ko04120,ko04137,ko04141,ko05012,map04120,map04137,map04141,map05012
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000122,GO:0000139,GO:0000151,GO:0000209,GO:0000266,GO:0000422,GO:0000423,GO:0000976,GO:0001067,GO:0001101,GO:0001504,GO:0001505,GO:0001558,GO:0001664,GO:0001932,GO:0001933,GO:0001959,GO:0001961,GO:0001963,GO:0001964,GO:0002020,GO:0002791,GO:0002792,GO:0002793,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003779,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005794,GO:0005829,GO:0006109,GO:0006140,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006584,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006839,GO:0006914,GO:0006915,GO:0006950,GO:0006979,GO:0006986,GO:0006996,GO:0007005,GO:0007034,GO:0007041,GO:0007154,GO:0007267,GO:0007268,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007399,GO:0007417,GO:0007420,GO:0007568,GO:0007584,GO:0007610,GO:0007611,GO:0007612,GO:0007626,GO:0008013,GO:0008021,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008340,GO:0008344,GO:0008345,GO:0008637,GO:0009056,GO:0009057,GO:0009605,GO:0009636,GO:0009712,GO:0009719,GO:0009725,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010243,GO:0010259,GO:0010468,GO:0010498,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010635,GO:0010636,GO:0010637,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010677,GO:0010720,GO:0010803,GO:0010817,GO:0010821,GO:0010822,GO:0010823,GO:0010906,GO:0010918,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0010992,GO:0010994,GO:0012501,GO:0012505,GO:0012506,GO:0014059,GO:0014069,GO:0014070,GO:0014823,GO:0014850,GO:0015631,GO:0015696,GO:0015844,GO:0015850,GO:0015872,GO:0015893,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016234,GO:0016235,GO:0016236,GO:0016239,GO:0016241,GO:0016567,GO:0016579,GO:0016604,GO:0016607,GO:0016740,GO:0017124,GO:0017144,GO:0017157,GO:0018958,GO:0019048,GO:0019054,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019941,GO:0019953,GO:0022008,GO:0022411,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030100,GO:0030111,GO:0030133,GO:0030154,GO:0030162,GO:0030163,GO:0030165,GO:0030178,GO:0030307,GO:0030334,GO:0030336,GO:0030382,GO:0030424,GO:0030534,GO:0030537,GO:0030544,GO:0030658,GO:0030659,GO:0030672,GO:0030808,GO:0030810,GO:0031072,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031344,GO:0031346,GO:0031396,GO:0031398,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031624,GO:0031625,GO:0031644,GO:0031645,GO:0031647,GO:0031648,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031960,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031984,GO:0032024,GO:0032092,GO:0032182,GO:0032231,GO:0032232,GO:0032268,GO:0032269,GO:0032270,GO:0032279,GO:0032368,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032872,GO:0032873,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033131,GO:0033132,GO:0033157,GO:0033238,GO:0033267,GO:0033365,GO:0033554,GO:0033673,GO:0033993,GO:0034613,GO:0034620,GO:0034622,GO:0034976,GO:0035249,GO:0035519,GO:0035690,GO:0035774,GO:0035821,GO:0035966,GO:0035967,GO:0036211,GO:0036477,GO:0036503,GO:0040008,GO:0040012,GO:0040013,GO:0042053,GO:0042069,GO:0042175,GO:0042176,GO:0042221,GO:0042325,GO:0042326,GO:0042391,GO:0042415,GO:0042417,GO:0042493,GO:0042592,GO:0042802,GO:0042826,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043086,GO:0043122,GO:0043123,GO:0043130,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043195,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043274,GO:0043388,GO:0043393,GO:0043408,GO:0043409,GO:0043412,GO:0043523,GO:0043524,GO:0043549,GO:0043565,GO:0043632,GO:0043653,GO:0043679,GO:0043900,GO:0043901,GO:0043903,GO:0043933,GO:0044003,GO:0044057,GO:0044068,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044306,GO:0044314,GO:0044389,GO:0044390,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044456,GO:0044463,GO:0044464,GO:0044703,GO:0044788,GO:0044793,GO:0044827,GO:0044828,GO:0044877,GO:0045069,GO:0045071,GO:0045121,GO:0045202,GO:0045472,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045806,GO:0045838,GO:0045862,GO:0045892,GO:0045893,GO:0045912,GO:0045920,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0045981,GO:0046328,GO:0046329,GO:0046676,GO:0046677,GO:0046872,GO:0046883,GO:0046887,GO:0046888,GO:0046914,GO:0046928,GO:0046929,GO:0048070,GO:0048073,GO:0048075,GO:0048076,GO:0048078,GO:0048087,GO:0048232,GO:0048285,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048525,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050433,GO:0050708,GO:0050709,GO:0050714,GO:0050764,GO:0050765,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050792,GO:0050793,GO:0050794,GO:0050796,GO:0050801,GO:0050804,GO:0050805,GO:0050821,GO:0050877,GO:0050890,GO:0050896,GO:0050905,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051087,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051258,GO:0051270,GO:0051271,GO:0051338,GO:0051341,GO:0051348,GO:0051354,GO:0051384,GO:0051385,GO:0051412,GO:0051493,GO:0051494,GO:0051580,GO:0051582,GO:0051583,GO:0051588,GO:0051589,GO:0051590,GO:0051603,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051701,GO:0051702,GO:0051704,GO:0051716,GO:0051817,GO:0051851,GO:0051865,GO:0051881,GO:0051934,GO:0051937,GO:0051952,GO:0051960,GO:0051962,GO:0051966,GO:0051967,GO:0055065,GO:0055069,GO:0055076,GO:0055080,GO:0060099,GO:0060101,GO:0060249,GO:0060255,GO:0060284,GO:0060322,GO:0060341,GO:0060359,GO:0060548,GO:0060627,GO:0060759,GO:0060760,GO:0060828,GO:0061136,GO:0061178,GO:0061630,GO:0061659,GO:0061726,GO:0061734,GO:0061912,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070050,GO:0070201,GO:0070302,GO:0070303,GO:0070382,GO:0070534,GO:0070585,GO:0070646,GO:0070647,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0070936,GO:0070979,GO:0071229,GO:0071230,GO:0071241,GO:0071242,GO:0071248,GO:0071287,GO:0071310,GO:0071407,GO:0071417,GO:0071495,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071867,GO:0071868,GO:0071869,GO:0071870,GO:0072507,GO:0080090,GO:0080134,GO:0080135,GO:0085020,GO:0090087,GO:0090090,GO:0090140,GO:0090141,GO:0090199,GO:0090201,GO:0090258,GO:0090276,GO:0090277,GO:0090278,GO:0090394,GO:0090493,GO:0090494,GO:0097159,GO:0097164,GO:0097237,GO:0097305,GO:0097327,GO:0097413,GO:0097458,GO:0097602,GO:0097708,GO:0098588,GO:0098589,GO:0098657,GO:0098771,GO:0098779,GO:0098780,GO:0098791,GO:0098793,GO:0098794,GO:0098805,GO:0098810,GO:0098815,GO:0098827,GO:0098857,GO:0098916,GO:0098984,GO:0099074,GO:0099075,GO:0099177,GO:0099501,GO:0099503,GO:0099536,GO:0099537,GO:0099572,GO:0110053,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0140110,GO:0150003,GO:0150034,GO:1900371,GO:1900373,GO:1900407,GO:1900408,GO:1900542,GO:1900544,GO:1901074,GO:1901075,GO:1901214,GO:1901215,GO:1901360,GO:1901363,GO:1901524,GO:1901526,GO:1901564,GO:1901565,GO:1901575,GO:1901615,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901797,GO:1901800,GO:1902065,GO:1902175,GO:1902176,GO:1902235,GO:1902236,GO:1902253,GO:1902254,GO:1902283,GO:1902494,GO:1902528,GO:1902530,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1902803,GO:1902882,GO:1902883,GO:1902903,GO:1902904,GO:1902914,GO:1902916,GO:1903008,GO:1903050,GO:1903052,GO:1903146,GO:1903201,GO:1903202,GO:1903203,GO:1903204,GO:1903214,GO:1903265,GO:1903299,GO:1903300,GO:1903320,GO:1903322,GO:1903350,GO:1903351,GO:1903362,GO:1903364,GO:1903376,GO:1903377,GO:1903381,GO:1903382,GO:1903426,GO:1903427,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1903531,GO:1903532,GO:1903533,GO:1903541,GO:1903542,GO:1903573,GO:1903578,GO:1903580,GO:1903599,GO:1903649,GO:1903651,GO:1903747,GO:1903827,GO:1903829,GO:1903859,GO:1903861,GO:1903900,GO:1903901,GO:1904048,GO:1904049,GO:1904643,GO:1904844,GO:1904845,GO:1904880,GO:1904881,GO:1904923,GO:1904925,GO:1904950,GO:1904951,GO:1904978,GO:1904979,GO:1905153,GO:1905154,GO:1905232,GO:1905279,GO:1905281,GO:1905365,GO:1905366,GO:1905475,GO:1905477,GO:1905897,GO:1905952,GO:1990234,GO:1990381,GO:1990444,GO:1990452,GO:1990837,GO:2000026,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000145,GO:2000146,GO:2000377,GO:2000378,GO:2000425,GO:2000426,GO:2001023,GO:2001141,GO:2001169,GO:2001171,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.	regulation of intralumenal vesicle formation
EggNOG OGs	KOG0006@1,KOG0006@2759
Ec32 ortholog description	C6HC-type zinc finger and E3 ubiquitin ligase RBR domain protein
Ec32 ortholog	Ec-08_000450.1
EC	2.3.2.31
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03029,ko04121,ko04131
Exons	6
Model size	1692
Cds size	1674
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927405.65166-UTR-D-herbacea_F_contig10:872260..872278	1622927405.65166-UTR-D-herbacea_F_contig10:872260..872278	Desmarestia herbacea DmunF female	UTR	D-herbacea_F_contig10 872261..872278 +
1690790152.3031733-UTR-D-herbacea_F_contig10:872260..872278	1690790152.3031733-UTR-D-herbacea_F_contig10:872260..872278	Desmarestia herbacea DmunF female	UTR	D-herbacea_F_contig10 872261..872278 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927405.670024-CDS-D-herbacea_F_contig10:872278..872567	1622927405.670024-CDS-D-herbacea_F_contig10:872278..872567	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 872279..872567 +
1690790152.3170738-CDS-D-herbacea_F_contig10:872278..872567	1690790152.3170738-CDS-D-herbacea_F_contig10:872278..872567	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 872279..872567 +
1622927405.6826696-CDS-D-herbacea_F_contig10:874853..875164	1622927405.6826696-CDS-D-herbacea_F_contig10:874853..875164	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 874854..875164 +
1690790152.3263018-CDS-D-herbacea_F_contig10:874853..875164	1690790152.3263018-CDS-D-herbacea_F_contig10:874853..875164	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 874854..875164 +
1622927405.6946676-CDS-D-herbacea_F_contig10:875673..875777	1622927405.6946676-CDS-D-herbacea_F_contig10:875673..875777	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 875674..875777 +
1690790152.3372464-CDS-D-herbacea_F_contig10:875673..875777	1690790152.3372464-CDS-D-herbacea_F_contig10:875673..875777	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 875674..875777 +
1622927405.7081444-CDS-D-herbacea_F_contig10:877031..877197	1622927405.7081444-CDS-D-herbacea_F_contig10:877031..877197	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 877032..877197 +
1690790152.3542032-CDS-D-herbacea_F_contig10:877031..877197	1690790152.3542032-CDS-D-herbacea_F_contig10:877031..877197	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 877032..877197 +
1622927405.7205038-CDS-D-herbacea_F_contig10:878272..878891	1622927405.7205038-CDS-D-herbacea_F_contig10:878272..878891	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 878273..878891 +
1690790152.3624713-CDS-D-herbacea_F_contig10:878272..878891	1690790152.3624713-CDS-D-herbacea_F_contig10:878272..878891	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 878273..878891 +
1622927405.7319412-CDS-D-herbacea_F_contig10:879556..879741	1622927405.7319412-CDS-D-herbacea_F_contig10:879556..879741	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 879557..879741 +
1690790152.3743467-CDS-D-herbacea_F_contig10:879556..879741	1690790152.3743467-CDS-D-herbacea_F_contig10:879556..879741	Desmarestia herbacea DmunF female	CDS	D-herbacea_F_contig10 879557..879741 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_D-herbacea_F_contig10.160.1	prot_D-herbacea_F_contig10.160.1	Desmarestia herbacea DmunF female	polypeptide	D-herbacea_F_contig10 872279..879741 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at D-herbacea_F_contig10:872261..879741+
coding sequence from alignment at D-herbacea_F_contig10:872261..879741+

protein sequence of mRNA_D-herbacea_F_contig10.160.1

>prot_D-herbacea_F_contig10.160.1 ID=prot_D-herbacea_F_contig10.160.1|Name=mRNA_D-herbacea_F_contig10.160.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=558bp
MRTPSGLPLCPMCHKELGFCPHSPIFRRDGSRSSGIAAMLGGASLAAVAL
QARERAVQGARQQMLPPPGGTKRRSIQENSEASRKGRRCEGSQDKVKLSC
TERQPRTSARLAAHGTHASTTNAGKSGGEGGNGSKSDSGDGGREGEGEAC
AAASAASGGAVVTDNDEHLLRYPGFHRNDVGKECIGCYTAEKIMFSFGCE
ERQREGAASQAQEKSDEAEGDAQDPPTAADGSTTGADVSVSHVMCLDCFR
VFVQSRVNERQLLAAREFDGYTVGCPMGCADSFVNPVCFEEILGAEFMVK
YRRFSALHLASYMRIVWCPGCHCGVVPSAAAAAAAKAAATAAAAAAAAAG
GAAASEAQQQAAASETPPRIIPLAPEISAPHYGLSLWGWWEWWNGADLPQ
LHPQPQLQLQPQPQPQPAVSPNNCTSCPGCHESLCLSCGALHAAEVDCAD
AHIDGGHIEDEDGVGGSRTVARNGARNDPSTGTKQCPQCHVPIFKEGGCN
HMRCSMCQHEFCWLHLTEWVVGGPCQLGHWSSDPMLNRAYNAKQYASTSV
REACTIS*

mRNA from alignment at D-herbacea_F_contig10:872261..879741+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_D-herbacea_F_contig10.160.1 ID=mRNA_D-herbacea_F_contig10.160.1|Name=mRNA_D-herbacea_F_contig10.160.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=7481bp|location=Sequence derived from alignment at D-herbacea_F_contig10:872261..879741+ (Desmarestia herbacea DmunF female)
CAAGCCAAAAGGTGGGTTATGCGGACACCGTCGGGGCTACCGCTATGTCC
GATGTGCCACAAGGAACTGGGATTCTGCCCACATTCGCCTATATTTCGCA
GGGACGGGTCTAGGTCTAGCGGCATTGCCGCGATGCTGGGCGGCGCCAGT
CTGGCGGCCGTGGCGCTGCAGGCGCGCGAGCGTGCCGTGCAGGGCGCCCG
CCAGCAGATGCTTCCACCGCCTGGAGGCACGAAAAGACGGAGTATTCAAG
AGAATTCAGAAGCTTCGAGAAAGGGAAGGCGGTGCGAGGGAAGCCAAGAC
AAGGTTAGTGACGGTGGTGTGCGAAATGCGATATTCGTACTGCCAAGGAA
GTACACGTATTTACGGTATGATATCATGCTTGTTTTGTGTGTTATCGTGA
TTCTCAGATCGTGCGGGGATATTTGGTTGATAGCTTGACTGTCATGATCA
CGCGAATTCGCCGGATCAATGAGAGAGGGGGGGGGGGGGGAGACAGGGGG
TACAGTGGTGACGGGAGAGGCCAGCCCTTGAACGTGTTTGGTGGATCGAT
TGGCGGTGGGATCCTACGCGCGTTTCGCATGTTTTCACCGTGAGAGTATT
GACTACACGCCCCTAGAAAGGGAAGCGTCATTGTTCTCGCAAGAGCGTTG
CCCGGTGGATTATCGTCTCAATGACCCTTGCGAATATAGAGCTATACCAA
CTATCTATACCGACGGGTTGCGTTCCCAGTTACGTTGACCTCGACCCTCG
TTCGATGAGGTTTGCTAGTTATAATACATACCCCTATTTTCCGATCCCGT
TGTGATTTCAAGGTCGCTGTTATTTCTTGTACTTTCCTACCTCGATTTTA
CGCATATCACGCTGTCCCTCCGTATTTTGCACGAAGGGATACTCTCGCAC
TGTACCAGTGAGTTCGATATTCGTTTTCAGTGCATGAAGCACAAATATAG
TTCATATGTCATACCCACGACCATGTATGACGACGCCCTTCGTCGTGAAT
CTGAACCTCGATTTTGTAGCGGTTTGTGTGTCGCGTCTGCTTGTTTCGGC
CCACCAAACGTTTCGATATATCACGCGCTACCAGCAGTTACGCACACCAA
ACTCTTTCCACCGAATCGCAATACAAGCCAGCAGCAACGCACACACCTCC
GCAACGCGCATGTACGTACCTCCCATAGATTGTTGCTCTCCCACACACCC
TCAGTGTATTGTGTTGTAGGCGCCTCGAAAGAAAGCGATGGGCCCTTCTT
GCGCCGAGTTATGGTGCCTGACACGCACACAATGAGTTATTACTTTCACA
ATCTGCCACTAGGAACACCGCGCTGCCCTTTGCGTGGCCAATACATGTTT
TGCCCTGTCTTAAAGCTATATTCAATGCAGAACAGTTGAATAGTTTCCTT
GCCTCCAGCGTCTCCTCCAGTGGTTCCCCCTCGCCAGCTCGGGGGGGGGG
TCGATTGCGCCACTCCGCCTGCCCGCGTCGCTTGCCAAACTTCTTGGGGC
GATTATGCAGAACATCAACCTTGATCTTCCCTAGCCGAAACAGAACCCGG
GCAAAAAAAATCGTTTTAGTCCATATGACTGAGGGTACAATTTTCAGTTG
TTGTCCCCTTCGGAAAGGGTTGTAGTCTAGCGCACAAGATTACGAGGCCC
AGGTTATCCTTCAACAGTATTCTGTCATGCCTGGGATTACCCAGGGGAGC
CGATGCATTATACTTTACATGTGTAAGGACCGATATTATCTGCGTAACCG
AAGTATCACACGGTGAATTTGACGACTATCCGCTGACCCCGGAACGAGTT
TGGAACAAACCCGCTGATGTTTTCGTAATATACAAGTAATAGTACACGCT
CGCTCGGAGTAAAAATGTATGTTAGCCGACATCCATCCCTTTACAACGTA
CTCGTACAGCTCGTTTAGCTGTCTGAACGGCCCGTGGTCTCAAGGATCTA
CCCCGCCGCTCTCCGGTTCATTTCATTCAATGCCTTCGATCGTTATAGTG
CATTGGGTTCAGCTTTAATTCCCGCAGGTTCATCGGATCTAATATATCAT
CCACACAAAAATTGAATCTACACATGGACTACGATTACTGACGCCGACAT
CCGTTCGATCGGCTACGCTGACGCACCACAACCCATTGCTGAATGTGGGC
ATACATGTATACACACACATAGCACAACAGCACTCCCGCCAGAAAAGACA
TGTCTTCAAAAACATAGAACATTGACACCGCTCACACACAACTTAGTGGA
GCCTACTTAAACGATATCCTAAAGATCTCCCATAACTTGTATTAATAGGA
TACCATTTATTATACTAATAGAGTACCTTGTGGGTTGTTGACCAAATCGG
AATGTTTTCTAGAACTAACCCTAACCCTACCCTAACGACCACACCATACT
AAAACCAAATAAAAATATATATAGAATCAGCCCCGAACACGTGGTAAACA
TTTTTCTGACTTAGTGCATACTACACTGCTGCGATATCCTCTCAAGCGTG
TACACAAAAACCAATGCCTCGCCGACGACATACAAACCCAGGCGGAATCT
GCGGCGGCGTCGGCGGAACTGGAAGCGGACGCGGCTGACACAGAATTATC
GTGCACAGAACGTCAACCCCGCACTAGCGCCAGGCTCGCAGCTCATGGCA
CACATGCCTCCACGACGAACGCGGGTAAGAGCGGCGGGGAAGGGGGCAAC
GGCAGCAAAAGCGACAGTGGTGATGGAGGACGGGAAGGAGAGGGAGAAGC
TTGTGCTGCTGCTTCGGCGGCGAGCGGCGGTGCCGTTGTTACCGACAACG
ATGAACACTTGCTTCGCTACCCGGGGTTCCACCGCAACGATGTCGGCAAG
GAGTGCATCGGCTGTTACACCGCCGAGAAGATCATGTTCAGCTTCGGTTG
CGAGGTCGGGAGATGCTAAAACCTTGAGCGCCGTCACGGTCAATAGAGAG
CTATAATGGCACTAACTATGTTAGTTATAGTATACCCCGTGTTGTTTCGG
AAGGGCGGAGTAGAGGGGAGATAATTAATTTCGACAAACGTGTCGTTACA
GGAGACGACGACTACCTTGCTCGTACTTCATTTCGTTTTTGCCAAAAGGC
TTGCTTGTGAACGTGATGCGCTGCTTCATGTTTACATTATATATGTTTGT
ACGTTATTTCTGCTTCACTTGACGTTCGACTCATGGACGGACGGCTTCGT
TCGGCTGATTGGTTGGTTGATTGGCTGATAGTTCTTTTGATTGGTGGATT
TCAACTAAGGGTACTCTGTACTCTACCCGAACACCTTACAGAGAGGCGGC
CATATTTAACAAATGGCCCGAGCTTACCGCGCCACATTCGTTTTGCTTGC
ACACCGCCCCTTTCTCCCTTGAAACTTCGCCTTTTTTTGCACCACTGGCA
TCGGGCGGCACAGGAGCGTCAGCGTGAAGGAGCTGCATCACAAGCTCAAG
AAAAAAGCGATGAAGCAGAAGGGGATGCTCAGGACCCTCCAACAGCGGCG
GATGGTTCAACCACCGGGTGCGCACAAATTGGCTAAACGCACCCCGAGAA
AAACCGTCGGCTGTCTTTAGTATTTCTACTGATTTTATTTTCTTGATGAA
AATCGACGAGCTCAGGGAATGCTGCATCTTGTGCGATAAAAACCGAGGCA
TGTGCCGGGGGGGGGGGGGGGGGGGGGATGTGTGACCACGGCTTGGAGCC
ATGCTACGGTAGGGGGGCTACATTTGGGCCCTAAAATGCTCTGACTGTTG
GCTCTTCAACTGAGGAACTACCCAATATCTTTGAAATTGCGTGCGTGATG
TACCTTTTTATTGGAAGTATACGTAGCCGATGGGAATGTTGATCGGCTTG
CGCATACACTTAGTTTGTCCAAGGCGGGTTTTGGTTGAGATATAGAGCTC
TTTAAGTGAGGAGCCTCAGAAAAATTGGGTACCCCACCGTAGCATGCCTC
CTTGCTTAGACCACTGAGCGATGAGCTCGTGTGAGCTGAACTAGGAACGT
TAAAATGAAGGTTAAATAGACTACCAATAACAACAATAGCGCCCTGTAGA
GCCTCGCACTGTTGCGTCATCGTCCGTCATCGCCGTCATGGGTTTCCTTC
CGCCTTAAAACCGTTTTTGTCGTCTGTGCATTTCCATGTCTTAACCCTGC
AGCTGTTGGGGGAGGAAGAGGCCAGGGGCGGGGGGGTACAAAATGAATTG
CGTGTCTTAGCTGTCAGACCAACCATTGACCCGACTGGAGGAGGCAATTG
TTTTGCTGTCGGTGGCGATTTTCGTGGTGGCTCAGAAGGTTTCTTGTACT
GTATATTCACGATCGCCTCATTGGCCTGGCCGCTAGGGCTTATTGATAGG
TTGATGTACGTAGCGCAAGCAGAAACTGCAAAACCAAACAAACGGAGCCT
GTACGTACATGGCAACTCCCCACACATTCAGACGGACACTCCAACAGCTA
AGAGCATTCGGTAGTTTTTACAACGCCATCATGAAGCATTCCAGCCGGTT
TTGTTATTGTGTGTGTAACGCGTTTTGTAGGTCGTCCATACGTTTGACCC
CCCCCCAAAAACTCGACGTGCTCCGTCCCGGCATAATTGGGATGCGAAGG
TCTATGGCCATACGACTACGGCCATGCATGAAATGAGTACACCCATCTCC
GTCTCGAAAGGGATGCGTGGTCAATGGCCAAATGACTAAGGCACGCAACA
AATGAATACCCCTCCTCCCCTCGCTCTGCTTTGCCTTGTGTTGCTCGCTT
CCTGCGTGCTCCGCTCTTAAGGGCCGACGTCTCCGTGTCGCACGTGATGT
GCCTCGACTGCTTTCGCGTCTTCGTGCAGAGTCGCGTGAACGAGCGTCAG
CTTCTGGCAGCGCGCGAGTTTGACGGTTACACTGTGGGCTGCCCAATGGG
ATGCGCCGACAGCTTCGTCAACCCGGTGTGCTTCGAGGTGCGTGCTTTGT
TTTTCATATGCCGGGAGTATTTGAGCGGCACGAAAATAACAAAATCTGTT
TCGTGTTTCTATATAAAAATGGAAATAAACAAGGAGGAAAAAACCAATGG
GACAACAACAAGAAGAAAAAACAGTGGGAATTTGGTCTAGGAGTATTTAG
CAGCAACGAGTAGGGGGGGTACAGGGACTGTTATTTTATCTGAAACCTCG
CTACACGATCTTCCATGTCCTTGATACCATCATCGACAGCAGTAATAACG
TTGCTGTTGCCATAGTATGTCGTGGCAGGCATGGAGGTGGTGATGCGGTC
TGCCCATTTATCTTGACTACCCGCTAGCGGCAAAAACGGCGGAATAGTTT
GGTCTGTAAATTATGTAAAAACTCGCCTTCGCTATCTGTGAAGAGCCTGT
TTCTGAAACACTGCATGCGTTTTCTGCAGAAATATTAGTTGATGTGGGTG
ACAGGTGAATGACTGCGTACTTTACACTGTGTGATTGTCGGACTAAAGCT
ATTGTTCTTGAAATCGTATGGGGTAACCCCTTCTTTGGCGCGAAGGTTTG
AGACGAGGACACTATATTTTGCCACAATTTTGTGGGGATGGCTGCGATGG
GACGAGGACATGGTGTGTGCAAAATACAGTGACAAAAACAATGATTTTGG
GAGCGGTAGTGGTGTTCACGACGAAGTGCTCGAAAATGTACCCATTATGG
TCCAAAAAATAACGGGTGTACCTGTTTCAGTCGTTTACCCACACATGTAT
ATGTGTGGCTGTTTCTACTGTAGCCTCCTTGACGTTGCAGCAAGCAGTAG
TGTACGGCCGTATTTTTTAATGCTTGCTCACGCAGTTCCCCTTCGATTGA
TTTTTAAGGTGTTCCCGCAGGGTTTCCCTTCCGTTTTTTTTGGGGGTTTT
GGGTCTCATGTCTGGGATAAAACAAAACACAAAAAGTTCTCTACACCGAG
AATAGAACCCATGACCAACCGCCCACAGAATCTACAAATCCAACCTCCAC
CGAACTAATACTGTACTGTGCTATCCCCCCCTTTCGACGCCCCCCCCCGC
CTCGCCGTGCAGGAAATCCTCGGCGCGGAGTTCATGGTGAAGTATCGTCG
ATTTTCGGCCCTCCACCTGGCATCGTACATGCGTATCGTTTGGTGCCCGG
GGTGCCACTGTGGCGTGGTCCCATCAGCCGCCGCTGCAGCAGCAGCCAAA
GCAGCCGCGACAGCGGCAGCAGCAGCAGCAGCAGCAGCGGGAGGTGCCGC
AGCGAGCGAGGCACAACAGCAAGCTGCAGCGAGCGAGACGCCGCCGCGCA
TCATCCCCCTTGCGCCCGAAATCTCTGCCCCTCACTACGGCCTGTCCCTC
TGGGGATGGTGGGAGTGGTGGAACGGGGCCGACCTGCCGCAGCTTCACCC
GCAGCCGCAACTGCAGCTACAGCCCCAGCCCCAGCCCCAGCCTGCGGTGA
GCCCGAACAACTGCACCAGCTGCCCCGGCTGCCATGAATCGCTCTGCTTG
TCGTGCGGAGCCTTGCACGCGGCCGAGGTCGACTGCGCCGATGCTCACAT
CGACGGCGGCCACATCGAGGACGAGGACGGCGTGGGTGGTTCGCGAACCG
TAGCACGGAACGGCGCTCGGAACGATCCGTCCACGGGCACGAAGCAGTGC
CCGCAGTGCCACGTGCCCATCTTCAAAGAAGGTGATGTGGCTCGATCAGT
TATTTTGCACGTTTTATATAGAATCCCGTGAGAGGTGGGGAAAGGGCGGA
GCTCTACGTGTATATTTGTTTCTTTCTTTTTTGCGTCTCGCGTTTGACGC
TTGCTGTTCTCATCCCCCTCCCTGTCTGTCTGTCTGTCTGTCTGTCTGCC
TGTATGCCTGTCCCTCTTTCTTACTATTTTATTTTATTCTCTTTCTTGAC
GTTGTTTTTTTATAATGATAGCTTTGCCTCTCCTGTCCCCCTTGCGTTAT
TGTGCCGGGTTTTGTGACCACGGGCGAGTTCTTTTGAGATGAGCTAATTT
GTGAAACAACAACAACAACAACAACAACAACATGTTGTACGGTTTGTGCG
ATGGCGCCCGACCCTCCGTTAACCGCGGTGGTTTGAACAGTTTTCCGACG
CCGCATGCCGTCTGAGGTAGTGTGATTACTTTCTTCTCAGCAGTAGGTTC
GTTTGCTCAACGAAAAACCTTTAGGTCGCGTCTACCTTACGTCCGCCATA
AAAACGCCAAAAAATTCCATCACCAATCAATCGCTATTGATAACAAGCCT
GCAACGGATCGCTGTTCTCTTTTTTTCTTCTTCCTGTTACCGCCTGTGAT
ATGTCCCGTGCTGTGCTGTCCCGTGCCGTGCTGTGCTGTGGTGCAGGCGG
ATGCAACCACATGCGCTGCAGCATGTGCCAACACGAGTTCTGCTGGCTCC
ACCTCACGGAGTGGGTGGTCGGCGGCCCTTGTCAGCTGGGACACTGGTCT
AGCGATCCCATGCTAAACCGCGCCTATAACGCGAAGCAGTACGCCTCCAC
GAGCGTAAGAGAGGCTTGCACCATTTCCTAA

Coding sequence (CDS) from alignment at D-herbacea_F_contig10:872261..879741+

>mRNA_D-herbacea_F_contig10.160.1 ID=mRNA_D-herbacea_F_contig10.160.1|Name=mRNA_D-herbacea_F_contig10.160.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=3348bp|location=Sequence derived from alignment at D-herbacea_F_contig10:872261..879741+ (Desmarestia herbacea DmunF female)
ATGCGGACACCGTCGGGGCTACCGCTATGTCCGATGTGCCACAAGGAACT
GGGATTCTGCCCACATTCGCCTATATTTCGCAGGGACGGGTCTAGGTCTA
GCGGCATTGCCGCGATGCTGGGCGGCGCCAGTCTGGCGGCCGTGGCGCTG
CAGGCGCGCGAGCGTGCCGTGCAGGGCGCCCGCCAGCAGATGCTTCCACC
GCCTGGAGGCACGAAAAGACGGAGTATTCAAGAGAATTCAGAAGCTTCGA
GAAAGGGAAGGCGGTGCGAGGGAAGCCAAGACAAGGTTAATGCGGACACC
GTCGGGGCTACCGCTATGTCCGATGTGCCACAAGGAACTGGGATTCTGCC
CACATTCGCCTATATTTCGCAGGGACGGGTCTAGGTCTAGCGGCATTGCC
GCGATGCTGGGCGGCGCCAGTCTGGCGGCCGTGGCGCTGCAGGCGCGCGA
GCGTGCCGTGCAGGGCGCCCGCCAGCAGATGCTTCCACCGCCTGGAGGCA
CGAAAAGACGGAGTATTCAAGAGAATTCAGAAGCTTCGAGAAAGGGAAGG
CGGTGCGAGGGAAGCCAAGACAAGGTTAAATTATCGTGCACAGAACGTCA
ACCCCGCACTAGCGCCAGGCTCGCAGCTCATGGCACACATGCCTCCACGA
CGAACGCGGGTAAGAGCGGCGGGGAAGGGGGCAACGGCAGCAAAAGCGAC
AGTGGTGATGGAGGACGGGAAGGAGAGGGAGAAGCTTGTGCTGCTGCTTC
GGCGGCGAGCGGCGGTGCCGTTGTTACCGACAACGATGAACACTTGCTTC
GCTACCCGGGGTTCCACCGCAACGATGTCGGCAAGGAGTGCATCGGCTGT
TACACCGCCGAGAAGATCATGTTCAGCTTCGGTTGCGAGAATTATCGTGC
ACAGAACGTCAACCCCGCACTAGCGCCAGGCTCGCAGCTCATGGCACACA
TGCCTCCACGACGAACGCGGGTAAGAGCGGCGGGGAAGGGGGCAACGGCA
GCAAAAGCGACAGTGGTGATGGAGGACGGGAAGGAGAGGGAGAAGCTTGT
GCTGCTGCTTCGGCGGCGAGCGGCGGTGCCGTTGTTACCGACAACGATGA
ACACTTGCTTCGCTACCCGGGGTTCCACCGCAACGATGTCGGCAAGGAGT
GCATCGGCTGTTACACCGCCGAGAAGATCATGTTCAGCTTCGGTTGCGAG
GAGCGTCAGCGTGAAGGAGCTGCATCACAAGCTCAAGAAAAAAGCGATGA
AGCAGAAGGGGATGCTCAGGACCCTCCAACAGCGGCGGATGGTTCAACCA
CCGGGAGCGTCAGCGTGAAGGAGCTGCATCACAAGCTCAAGAAAAAAGCG
ATGAAGCAGAAGGGGATGCTCAGGACCCTCCAACAGCGGCGGATGGTTCA
ACCACCGGGGCCGACGTCTCCGTGTCGCACGTGATGTGCCTCGACTGCTT
TCGCGTCTTCGTGCAGAGTCGCGTGAACGAGCGTCAGCTTCTGGCAGCGC
GCGAGTTTGACGGTTACACTGTGGGCTGCCCAATGGGATGCGCCGACAGC
TTCGTCAACCCGGTGTGCTTCGAGGGCCGACGTCTCCGTGTCGCACGTGA
TGTGCCTCGACTGCTTTCGCGTCTTCGTGCAGAGTCGCGTGAACGAGCGT
CAGCTTCTGGCAGCGCGCGAGTTTGACGGTTACACTGTGGGCTGCCCAAT
GGGATGCGCCGACAGCTTCGTCAACCCGGTGTGCTTCGAGGAAATCCTCG
GCGCGGAGTTCATGGTGAAGTATCGTCGATTTTCGGCCCTCCACCTGGCA
TCGTACATGCGTATCGTTTGGTGCCCGGGGTGCCACTGTGGCGTGGTCCC
ATCAGCCGCCGCTGCAGCAGCAGCCAAAGCAGCCGCGACAGCGGCAGCAG
CAGCAGCAGCAGCAGCGGGAGGTGCCGCAGCGAGCGAGGCACAACAGCAA
GCTGCAGCGAGCGAGACGCCGCCGCGCATCATCCCCCTTGCGCCCGAAAT
CTCTGCCCCTCACTACGGCCTGTCCCTCTGGGGATGGTGGGAGTGGTGGA
ACGGGGCCGACCTGCCGCAGCTTCACCCGCAGCCGCAACTGCAGCTACAG
CCCCAGCCCCAGCCCCAGCCTGCGGTGAGCCCGAACAACTGCACCAGCTG
CCCCGGCTGCCATGAATCGCTCTGCTTGTCGTGCGGAGCCTTGCACGCGG
CCGAGGTCGACTGCGCCGATGCTCACATCGACGGCGGCCACATCGAGGAC
GAGGACGGCGTGGGTGGTTCGCGAACCGTAGCACGGAACGGCGCTCGGAA
CGATCCGTCCACGGGCACGAAGCAGTGCCCGCAGTGCCACGTGCCCATCT
TCAAAGAAGGAAATCCTCGGCGCGGAGTTCATGGTGAAGTATCGTCGATT
TTCGGCCCTCCACCTGGCATCGTACATGCGTATCGTTTGGTGCCCGGGGT
GCCACTGTGGCGTGGTCCCATCAGCCGCCGCTGCAGCAGCAGCCAAAGCA
GCCGCGACAGCGGCAGCAGCAGCAGCAGCAGCAGCGGGAGGTGCCGCAGC
GAGCGAGGCACAACAGCAAGCTGCAGCGAGCGAGACGCCGCCGCGCATCA
TCCCCCTTGCGCCCGAAATCTCTGCCCCTCACTACGGCCTGTCCCTCTGG
GGATGGTGGGAGTGGTGGAACGGGGCCGACCTGCCGCAGCTTCACCCGCA
GCCGCAACTGCAGCTACAGCCCCAGCCCCAGCCCCAGCCTGCGGTGAGCC
CGAACAACTGCACCAGCTGCCCCGGCTGCCATGAATCGCTCTGCTTGTCG
TGCGGAGCCTTGCACGCGGCCGAGGTCGACTGCGCCGATGCTCACATCGA
CGGCGGCCACATCGAGGACGAGGACGGCGTGGGTGGTTCGCGAACCGTAG
CACGGAACGGCGCTCGGAACGATCCGTCCACGGGCACGAAGCAGTGCCCG
CAGTGCCACGTGCCCATCTTCAAAGAAGGCGGATGCAACCACATGCGCTG
CAGCATGTGCCAACACGAGTTCTGCTGGCTCCACCTCACGGAGTGGGTGG
TCGGCGGCCCTTGTCAGCTGGGACACTGGTCTAGCGATCCCATGCTAAAC
CGCGCCTATAACGCGAAGCAGTACGCCTCCACGAGCGTAAGAGAGGCTTG
CACCATTTCCTAAGCGGATGCAACCACATGCGCTGCAGCATGTGCCAACA
CGAGTTCTGCTGGCTCCACCTCACGGAGTGGGTGGTCGGCGGCCCTTGTC
AGCTGGGACACTGGTCTAGCGATCCCATGCTAAACCGCGCCTATAACGCG
AAGCAGTACGCCTCCACGAGCGTAAGAGAGGCTTGCACCATTTCCTAA