mRNA_D-herbacea_F_contig10.143.1 (mRNA) Desmarestia herbacea DmunF female
|
Overview
Homology
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: D7FP98_ECTSI (Flagellar radial spoke protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP98_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 1.130e-154 Identity = 265/457 (57.99%), Postives = 324/457 (70.90%), Query Frame = 1
Query: 7 SYEFSSKPRPVNVR-----SKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDPRVARGNTFAGDTRRIAP--EPGAKTSKVSSKRSLARARSVRSSCSSMYDKSASRPSLREVMDLARYLVEPGEDSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAAKLTRDREDEARRVLELKHAAVLAEREKEQLRREDEHRREVAERWVAKHKVACLQLVRQVLPLSMERVFEELSSKSWTTPTVHQIKSDFLPWLFESVTRDVDQRSSVRDTVSHLLDSVEEAAETTRMARIEKTREEVEAREKAARIAHERIIQLFLPAHAIGGEDGDDRAGPVSVKAGDTVKSAEAALMAWLREQGGVEDVSQPEGGFLAGYVREARRAGGATSRVGKGSTLLELQERVGV-SDEILL 1353
+YEFSS+PRPV R R +G+ G A + +PF P+NIHHDPRVARGNTFAGD R P EPG KT S++ L ++RS R S SS +D AS+P LRE +DL+RYLVEPG+ ++RPE EADTQTD+F+ RPQTPDFVPKKTGVD TQIEVSDKLFD E EVQP+L VLVGKTLEQAR+EVERE+EL CIREAA L R +E ++VLELK AAV A EK R +AK KVACLQLVRQVLPLS++R FE+LS+KSW T +V QIK FLPWLF V DV QRSSV D + LL+SV+E AET R RI+ E EAR +AAR+A ER+I+LF+P +GGE+G+ R GPV+VKAG+TVK+AEA + WL ++ ++ P+GGFL GY+REARR GG RVG+GS LL+LQ +G SDE++L
Sbjct: 6 AYEFSSQPRPVKTRPHNKQQSRRDVVGSGGNGNGNAGARY--DPFFPINIHHDPRVARGNTFAGDRRDAQPSAEPGPKTVAKKSRKRLGQSRS-RGSSSSFFDTRASQPVLREELDLSRYLVEPGDTAARPEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKTLEQARMEVEREHELLCIREAATALVHQRAEEVQQVLELKQAAVEA--EKXXXXXXXXXXXXXNRRRLAKEKVACLQLVRQVLPLSLDRAFEQLSAKSWETQSVQQIKKVFLPWLFGRVAADVGQRSSVLDALDSLLESVDETAETARNQRIQDRDREAEARREAARVARERVIRLFVPGEVVGGEEGE-RLGPVAVKAGETVKAAEAKVARWLAKERETGELEDPQGGFLGGYLREARRKGGGR-RVGQGSMLLDLQVMLGAPSDEVVL 455
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: A0A6H5KBC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC6_9PHAE) HSP 1 Score: 315 bits (808), Expect = 1.160e-101 Identity = 188/342 (54.97%), Postives = 230/342 (67.25%), Query Frame = 1
Query: 343 YLVEPGEDSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAAKLTRDREDEARRVLELKHAAVLAEREKEQL----RREDEHRREVAERWVAKHKVACLQLVRQVLPLSMERVFEELSSKSWTTPTVHQIKSDFLPWLFESVTRDVDQRSSVRDTVSHLLDSVEEAAETTRMARIEKTREEVEAREKAARIAHERIIQLFLPAHAIGGEDGDDRAGPVSVKAGDTVKSAEAALMAWLREQGGVEDVSQPEGGFLAGYVREARRAGGATSRVGKGSTLLELQERVGV-SDEILL 1353
YLVEPG+ ++RPE EADTQTD+F+ RPQTPDFVPKKTGVD TQIEVSDKLFD E EVQP+L VLVGK VLELK AAV AE++KE R E HRR +AK KVACLQLVRQVLPLS++R FE+LS+KSW T +V QIK FLPWLF V D+ QRSSV D + LL+SV+E AET R+ RI+ E E R +AAR A ER+I+LF+P +GGE+G+ R GPV+VKAG+TVK+AEA + +WL + E++ P+GGFL GY+REARR GG RVG+GS LL+LQ +G SDE++L
Sbjct: 20 YLVEPGDTAARPEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK-----------------------------------VLELKQAAVEAEKKKEXXXXXXREEANHRR------LAKEKVACLQLVRQVLPLSLDRAFEQLSAKSWQTQSVQQIKKVFLPWLFGRVAADLGQRSSVLDALGSLLESVDETAETARIQRIQDRDREAETRREAAREARERVIRLFVPGEVVGGEEGE-RLGPVAVKAGETVKAAEAKVASWLAIERETEELEIPQGGFLGGYLREARRKGGGR-RVGQGSMLLDLQAMLGAPSDEVVL 318
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: A0A835YQI5_9STRA (Radial spoke protein 3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI5_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.080e-35 Identity = 144/465 (30.97%), Postives = 220/465 (47.31%), Query Frame = 1
Query: 31 RPVNVRSKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDPRVARGNTFAGDTRRIAPEPGAKTSKVSSKR-------SLARARSVRSSCSSMYDKS-ASRPSLREVMDLARYLVEP--------GEDSSRPECEAD----------TQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAAKLTRDREDEARRVLELKHAAVLAEREKEQLRREDEHRREVAERWVAKHKVACLQLVRQVLPLSMERVFEELSSKS-WTTPTVHQIKSDFLPWLFESVTRDVDQRSSVRDTVSHLLDSVEEAAETTRMARIEKTREEVEAREKAARIAHE-RIIQLFLPAHAIGGEDGDDRAGPVSVKAGDTVKSAEAALMAWLREQGGVEDVSQPEGGFLAGYVREARRAGGATSRVGKGSTLLELQERVGVSD 1341
R + R K+R D+ T T + + P+NIH DPRVAR NT+A R + P G T+ S KR S+A R+ S+ +YD + + + ++ +DL++YLV P E +R A TQTDEF +P + G D T++ ++ +LFD ++E++PLLDVL+GKTLEQA++EVER EL+ I +A + +R EAR +L+ AA+ ER RW A KVA + ++RQ P + E L + W P I +F+PWL +SV S+ L + E +A + + EA+E AA A QL++ A+G E G + GPV+V ++ + E ++ W E G +V PEGGFL+ + + + TL EL+ER G+++
Sbjct: 17 RTITPRPKYRGDVVQQDDDALTEPDT---DDYYPINIHQDPRVARVNTYA--RRPVLPPIG--TASSSKKRVKPGRVVSIASQRAALSA--QLYDPNYGTYNNQKQELDLSKYLVAPEPQIEDDASERINRQRAPASMPFYGFSDSVTQTDEFAEKPDEVYYKQPLGGADAATEV-INTELFDFDREIKPLLDVLIGKTLEQAKLEVERSWELQQIAQATDRFNAERVAEARAQEQLEAAAI--ERXXXXXXXXXXXXXXALSRWQATQKVAAVCMMRQCWPGVLRGACEALRAAGRWCEPRAIDIADEFMPWLLDSVGARAGALSAAYAVTDGLCEEALRRGEA--LAEAHEAAVQREAKEAAAASAAAGATTQLWVEGAAVGLEGG--KLGPVTVTNDSSIAAVEKSIADWFEENGLAAEV--PEGGFLS-------LSFDCSGVDAESVTLTELKERGGLAE 456
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: A0A8C3A114_CYCLU (Radial spoke head 3 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C3A114_CYCLU) HSP 1 Score: 121 bits (304), Expect = 2.280e-27 Identity = 111/332 (33.43%), Postives = 160/332 (48.19%), Query Frame = 1
Query: 7 SYEFSSKPRPVNVRSKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDPRVARGNTFAGDTRRIAPEPG---AKTSKVSSKRSLARARSVRSSCSSMYDKSASRPSLREVMDLA--RYLVEPGEDSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAAKLTRDREDEARRVLELKHAAVLAEREKEQLRREDEHRREVAERWVAK------HKVACLQLVRQVLPLSMERVFEELSSKSWT-TPTVHQIKSDFLPWLFESVTRDVDQRSSVRDTVSHLLDSV 966
+Y FSS+PRPV RSKFR + P NI +D RV RGNT+A P P + + +R++AR R+ + ++A R+ +D+ YL E + + E QTD F RP TP F+P K+G DV TQIE + LFD +EVQP+L+VLVGKT+EQ +EV E EL C+R R +E VL L+ E+E+ RE+ RR ++ V K K+A +Q + VF L S + P I+++F+PWL V +++R + R HLLD++
Sbjct: 14 NYIFSSRPRPVETRSKFREPPSDQ-------------TPGTYGNIMYDRRVVRGNTYAQQIIPTMPLPDPVEVQRQHDNRRRAIARKRAREQ----LRTRTAEALQGRKHIDVQTEHYLEELSDVIVATDIEC--QTDAFLDRPATPLFIPAKSGKDVETQIEEGE-LFDFNREVQPVLEVLVGKTIEQCLLEVMEEEELACLRAQQRAFEELRNNELAEVLRLQ--------EQERRHREEXXRRIAQQKEVLKKEKEIAEKIAARAYTKQYFSDLLPAVFTSLRSHGYFYDPVEKDIETNFIPWLMVEVNNSLERRYTAR----HLLDNI 313
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: F0Y5T0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5T0_AURAN) HSP 1 Score: 122 bits (306), Expect = 2.690e-27 Identity = 112/312 (35.90%), Postives = 156/312 (50.00%), Query Frame = 1
Query: 7 SYEFSSKPRPVNVRSKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDPRVARGNTFA------GDTR----RIAPEPG-AKTSKVSSKRSLARARSVRSSCSSMYDKSASRPSLREVMDLARYLVEPGEDSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAA-KLTRDREDEARRVLELKHAAVLAEREKEQLRREDEHRREVAERWVAKHKVACLQLVRQVLPLSMERVFEELSSK-SWTTPTVHQIKSDFLPWLFESV 903
++ F S+P+ V+ A +T + ++ + P+NI DPRV RG+T++ GD + P PG A K K+ A RS+ +D S S ++ +DL YLVE SS E A QTD F +P F P KTGVD T +E D+ F EVQPLL VLV KTLEQA +EVE+E EL I + + KL R ++AR V ++ A V +REK +L + R + E KVA +LV Q+LP E + + SW P +H+IK+ LPWL+ V
Sbjct: 11 AWAFESRPKAVST-----------SRAKATPTAELLNDIDGPLNIMSDPRVVRGSTYSLYRSLPGDGAPMEDTVPPTPGGAPARKARRKKKKADGRSI-------FDAKPSSNS-KQALDLTPYLVEKEYASSAVEEAA--QTDGFLEQPPPAPFAPPKTGVDASTSME-DDQPFVFNNEVQPLLAVLVSKTLEQAMLEVEQEEELAAIADDMSDKLARQAAEKAR-VEAMEQAEV--DREKAKLGDFESARAALVEEQTLARKVASSRLVDQLLPEIFEGAYRHFEDRGSWVEPVLHEIKATTLPWLYARV 297
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: A0A3Q3F1U1_9LABR (Radial spoke head 3 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3F1U1_9LABR) HSP 1 Score: 116 bits (291), Expect = 1.730e-25 Identity = 120/368 (32.61%), Postives = 171/368 (46.47%), Query Frame = 1
Query: 7 SYEFSSKPRPVNVRSKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDPRVARGNTFAGDTRRIAPEPGA---KTSKVSSKRSLARARSVRSSCSSMYDKSASRPSLREVMDLARYLVEPGEDSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAAKLTRDREDEARRVLELKHAAVLAEREK--------------EQLRREDEHRREVAERWVAKHKVACLQLVRQVLPLSMERVFEELSSKSWT-TPTVHQIKSDFLPWLFESVTRDVDQRSSVRDTVSHLLDSVEEAAETTRMARIEKTREEVEAREKAARIAH 1056
SY FSS+PRPV RSK+R A S G NI +D RV RGNT+A +P + + +R++AR R+ + R + DL YL E E P+ E QTD+F RP TP F+P K+G DV TQIE + LFD ++EVQPLL+VLVGKT+EQ+ EV E EL ++ + R + R EL L E+E+ E L+RE RE AE K+A +Q L VF L S + P + IK++F PWL + + +D+R + R+ + ++ V ++K +EE + A++I H
Sbjct: 14 SYTFSSRPRPVETRSKYRE-------APSEQTQINYG------NIMYDRRVVRGNTYAQHIIPTTAQPDLAELQRQQEIRRRAIARKRAQEQFKPQTPEALQGRKHIDVQTDL--YLEELSEVIVAPDIEC--QTDDFLDRPATPLFIPAKSGKDVETQIEEGE-LFDFDREVQPLLEVLVGKTIEQSLEEVMEEEELASLK------AQQRAFQELRNNELAEVQRLREQERRXXXXXXXXXXXXXEVLKRE----RETAE------KIAARAYTQQYLADLFPAVFTSLRSHGYFYDPVENDIKTNFFPWLMDEINNRLDERYTARELLDTIIHDV-----------VQKRQEECVQGDTASKIRH 336
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: A0A484CEX7_PERFV (Uncharacterized protein n=9 Tax=Percomorphaceae TaxID=1489872 RepID=A0A484CEX7_PERFV) HSP 1 Score: 115 bits (287), Expect = 5.320e-25 Identity = 110/328 (33.54%), Postives = 159/328 (48.48%), Query Frame = 1
Query: 7 SYEFSSKPRPVNVRSKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDPRVARGNTFAGDTRRIAPEPG---AKTSKVSSKRSLARARSVRSSCSSMYDKSASRPSLREVMDLARYLVEPGEDSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAAKLTRDREDEARRVLELKHAAVLAEREKEQLRREDEHRREVAERWVAK------HKVACLQLVRQVLPLSMERVFEELSSKSWT-TPTVHQIKSDFLPWLFESVTRDVDQRSSVR---DTVSH 951
SY F+S+PRPV RSK+R S + G NI +D RV RGNT+A +P A+ + + +R++AR R+ S + R + +L YL E + + E QTD F +P TP F+P K+G DV TQIE + LFD ++EVQP+L+VLVGKT+EQ+ EV E EL C+R R +E VL L+ E+E+ R E++ RR ++ V K K+A +Q L + VF L S + P I++ F PWL V +++R + R DT+ H
Sbjct: 14 SYTFASRPRPVENRSKYREP-------PSEQTHSNYG------NIMYDRRVVRGNTYAQLIIPTTAQPDPVEAQRQQENRRRAIARKRAREQFRPSTPEALQGRKHIDVQTEL--YLEELSDVIVATDVEC--QTDAFLDKPATPLFIPAKSGKDVETQIEEGE-LFDFDREVQPVLEVLVGKTIEQSLEEVMEEEELACLRAQQRAFEELRNNELAEVLRLQ--------EQERRRSEEKGRRIAQQKEVLKKEKETAEKIAARAYTQQYLADLLPAVFTSLRSHGYFYDPVEKDIENHFFPWLMAEVNNSLEKRYTARELLDTIIH 315
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: UPI001BEBD2AE (radial spoke head protein 3 homolog n=1 Tax=Chelmon rostratus TaxID=109905 RepID=UPI001BEBD2AE) HSP 1 Score: 115 bits (287), Expect = 5.920e-25 Identity = 111/332 (33.43%), Postives = 163/332 (49.10%), Query Frame = 1
Query: 7 SYEFSSKPRPVNVRSKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDPRVARGNTFAGDTRRIAPEPGAKTSKVSSKRSLARARSVRSSCSSMYDKSASRPSL--REVMDLAR--YLVEPGE--DSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAAKLTRDREDEARRVLELKHA--------AVLAEREKEQLRREDEHRREVAERWVAKHKVACLQLVRQVLPLSMERVFEELSSKSW-TTPTVHQIKSDFLPWLFESVTRDVDQRSSVRDTVSHLL 957
SY FSS+PRPV R+K+R S A + G NI +D RV RGNT+ T+ I P + ++ R R+V + + + +L R+ +D+ YL E + D++ EC QTD F +P TP F+P K+G D TQIE + LFD ++EVQPLL+VLVGKT+EQ+ EV E EL C+R R +E VL L+ A +++E L++E RE AE K+A +Q L + VF L S+ + P V I+++F PWL V +D+R R + +++
Sbjct: 14 SYTFSSRPRPVENRTKYREP-------PSEQAHSNYG------NIMYDRRVVRGNTY---TQHIIPTVAQPDPAETHRQQEVRRRAVARKRTREQFRPTTPKALQGRKHIDVQTELYLEELSDVIDATDIEC----QTDAFLDKPATPLFIPAKSGKDAETQIEEGE-LFDFDREVQPLLEVLVGKTIEQSLEEVMEEEELACLRAQQRAFEELRNNELAEVLRLQEQERRRXXXXARRIAQQREVLQKE----RETAE------KIAAHAYTKQYLADLLPAVFTSLRSRGYFCDPVVKDIETNFFPWLMAEVNNSLDKRYIARQLLDNII 314
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: UPI0014715971 (radial spoke head protein 3 homolog n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI0014715971) HSP 1 Score: 113 bits (282), Expect = 2.500e-24 Identity = 108/337 (32.05%), Postives = 157/337 (46.59%), Query Frame = 1
Query: 10 YEFSSKPRPVNVRSKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDPRVARGNTFAGDTRRIAPEPGAKTSKVSSKRSLARARSVRSSCSSMYDKSASRPSL-REVMDLA--RYLVEPGEDSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIREAAAKLTRDREDEARRVLELKHAAVLAEREK--------------EQLRREDEHRREVAERWVAKHKVACLQLVRQVLPLSMERVFEELSSKSWT-TPTVHQIKSDFLPWLFESVTRDVDQRSSVRDTVSHLLDSV 966
Y FSS+PR V RSK+R + NI +DPRV RGNT+A I +P ++ + ++ R R Y P R +D+ RYL E + + + QTD F RP TP F+P K+G DV TQIE + LFD + EVQP+L+VLVGKT+EQ+ +EV E EL C+R + R E R EL L ERE+ E L++E RE AE K+A +Q L + VF L + + P ++++FLPWL + V +++R+ R+ + +++ V
Sbjct: 7 YTFSSRPRAVENRSKYREPPADQRDVKCHYG-----------NIMYDPRVVRGNTYAKKVIPIKTQPD--LVEIQRQEAMRRKAMARKREREQYRLRTPEPVQGRMHIDIQTDRYLEELSDIVVTADIQC--QTDPFLDRPATPLFIPAKSGKDVSTQIEEGE-LFDFDSEVQPILEVLVGKTIEQSLLEVMEEEELACLR------AQQRAFEVLRNAELAELQRLEERERXXXXXXXXXXXXXXEALQKE----RETAE------KIAARAYSQQFLANLVPTVFTSLKNHGYIYDPVERDVETNFLPWLMDGVHNILERRNVARELLDNIIHDV 311
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Match: A0A1Y1HK05_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK05_KLENI) HSP 1 Score: 115 bits (287), Expect = 2.570e-24 Identity = 113/341 (33.14%), Postives = 176/341 (51.61%), Query Frame = 1
Query: 13 EFSSKPRPVNVRSKFR-PDIGNNGGATSTAASTIVGEPF-MPVNIHHDPRVARGNTFAGDTRRIAPEPGAKTSKVSSKRSLARARSVRSSCSSMYDKSASRPSLREVMDLARYLVEPGEDSSRPECEADTQTDEFEGRPQTPDFVPKKTGVDVCTQIEVSDKLFDLEKEVQPLLDVLVGKTLEQARIEVERENELECIR--EAAAKLTRDREDEARRVLELKHAAVLAEREKEQLRREDEHRREVAERWVAKHKVACLQLVRQVLPLSMERVFEELSSKS-WTTPTVHQIKSDFLPWLFESVTRDVDQRSSVRDTVSHLLDS-VEEAAETTRMARIEKTRE 1017
+ +S+ R R ++R P+ GG P+ +P+NI +D RV RG+ +A P TS+ + R S + S D R + DL YL E + PE DTQTD F RPQTP +VP+K+GVDV TQI D LF+ + EV+P+L+VL+GKTLEQ+ +EV E EL +R + + R+ E A + +E LAE+ + R E E R +A++ A+ KVA R L + VF+ L+++ + P +I++ F+P+L ++V +++ + R TV L++S V+ AE R+A E+ +E
Sbjct: 19 QLTSQSRVTANRRRYREPNEATEGG------------PYPIPMNIMYDRRVVRGSNYAPQLLPPMSPPEEATSENRPAKVTKRKSSTKLSKPGTPDPVLGRKHIDIQTDL--YLEELTD--RMPEASVDTQTDAFMDRPQTPLYVPQKSGVDVETQIMEGD-LFNFDFEVEPILEVLIGKTLEQSLMEVMEEEELAAMRAHQEHFEAVRNAELIATQRMEAAEQRKLAEKAR---RLEQERARALAQK-AAQEKVAAQTFARDYLGGLIAGVFQGLTNEGVFYDPVEREIETQFMPFLHDAVAQELRKTELARATVRALIESAVQSYAEKQRIAEEERAQE 338 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig10.143.1 >prot_D-herbacea_F_contig10.143.1 ID=prot_D-herbacea_F_contig10.143.1|Name=mRNA_D-herbacea_F_contig10.143.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=458bp MASYEFSSKPRPVNVRSKFRPDIGNNGGATSTAASTIVGEPFMPVNIHHDback to top mRNA from alignment at D-herbacea_F_contig10:618066..624008- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig10.143.1 ID=mRNA_D-herbacea_F_contig10.143.1|Name=mRNA_D-herbacea_F_contig10.143.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=5943bp|location=Sequence derived from alignment at D-herbacea_F_contig10:618066..624008- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig10:618066..624008- >mRNA_D-herbacea_F_contig10.143.1 ID=mRNA_D-herbacea_F_contig10.143.1|Name=mRNA_D-herbacea_F_contig10.143.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2748bp|location=Sequence derived from alignment at D-herbacea_F_contig10:618066..624008- (Desmarestia herbacea DmunF female)back to top |