mRNA_D-herbacea_F_contig10.137.1 (mRNA) Desmarestia herbacea DmunF female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-herbacea_F_contig10.137.1
Unique NamemRNA_D-herbacea_F_contig10.137.1
TypemRNA
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig10.137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig10contigD-herbacea_F_contig10:410506..413800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-19
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-08_003480.1
Exons4
Model size1376
Cds size1374
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig10.137.1prot_D-herbacea_F_contig10.137.1Desmarestia herbacea DmunF femalepolypeptideD-herbacea_F_contig10 410506..413800 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927398.4135914-CDS-D-herbacea_F_contig10:410505..4106941622927398.4135914-CDS-D-herbacea_F_contig10:410505..410694Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig10 410506..410694 +
1690790148.089401-CDS-D-herbacea_F_contig10:410505..4106941690790148.089401-CDS-D-herbacea_F_contig10:410505..410694Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig10 410506..410694 +
1622927398.4222295-CDS-D-herbacea_F_contig10:411516..4116601622927398.4222295-CDS-D-herbacea_F_contig10:411516..411660Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig10 411517..411660 +
1690790148.1232874-CDS-D-herbacea_F_contig10:411516..4116601690790148.1232874-CDS-D-herbacea_F_contig10:411516..411660Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig10 411517..411660 +
1622927398.4300222-CDS-D-herbacea_F_contig10:412349..4129491622927398.4300222-CDS-D-herbacea_F_contig10:412349..412949Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig10 412350..412949 +
1690790148.136579-CDS-D-herbacea_F_contig10:412349..4129491690790148.136579-CDS-D-herbacea_F_contig10:412349..412949Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig10 412350..412949 +
1622927398.4381828-CDS-D-herbacea_F_contig10:413359..4138001622927398.4381828-CDS-D-herbacea_F_contig10:413359..413800Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig10 413360..413800 +
1690790148.146664-CDS-D-herbacea_F_contig10:413359..4138001690790148.146664-CDS-D-herbacea_F_contig10:413359..413800Desmarestia herbacea DmunF femaleCDSD-herbacea_F_contig10 413360..413800 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-herbacea_F_contig10.137.1

>prot_D-herbacea_F_contig10.137.1 ID=prot_D-herbacea_F_contig10.137.1|Name=mRNA_D-herbacea_F_contig10.137.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=458bp
MGRPGGSGGCGEEGGVSGEVWSLAARGLANMALEHEMAKEAIAESECLRR
VCNHAIRDCTEDKVRDGSMAILKSMCFLAPIHVRVKVVDCLGGVNGMLRL
VQLPRNCQVYQGLQILRNLLYAVPFRDLCRSEMPPSGEGGPERASSVPGV
TTREAATSTSGGASSSAPQNRSQGGSQNDRSQTWEGATERARGRDVASVR
RRFWGDPEPSGSGSSTDGGGRGRDSSRRSEGQLEAMEVEVQLGLGTTTTS
RVRCTRGDAARGEGREGRLLATVGPGAREDRDSGIARLIDAILGKLEEAE
KEEGFYEASCAALHVMHALSVTSESQCVALRTPRVLRVVMPYCIPLARSR
HERKRDTAALSPLAPSARTAAAEASTAEEEPGTARGLTPPRLGNDRSSSS
SRSSSGSNSGSDSGVPPHESADIAARLLLTQLIPERTGGEMTAAIRAFTA
AMAAAPAA
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mRNA from alignment at D-herbacea_F_contig10:410506..413800+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-herbacea_F_contig10.137.1 ID=mRNA_D-herbacea_F_contig10.137.1|Name=mRNA_D-herbacea_F_contig10.137.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=3295bp|location=Sequence derived from alignment at D-herbacea_F_contig10:410506..413800+ (Desmarestia herbacea DmunF female)
ATGGGGCGGCCGGGCGGGAGTGGTGGGTGCGGCGAGGAGGGGGGCGTGAG
CGGAGAGGTGTGGAGTCTTGCGGCGAGGGGATTGGCTAACATGGCGCTGG
AGCACGAGATGGCGAAAGAGGCCATTGCCGAGTCCGAGTGTCTCCGGAGG
GTTTGCAACCATGCTATCCGTGATTGCACAGAGGACAAGGTTTGGTTTTT
GCATGTACTGTATATACATGGGTTTCAACAAATGATGATAAAAACATGTT
TTATTGTGATTGGTTGTGGCGCGTCCTCCCCCCCCTCCATCGCTTTTTTT
ATAGCTCTTTCTCTGTGTACTGTCTACGTTCTATAACCTTCACTTTCAAG
AAAAAACGAACAAACGATCATGTACCCCTATCCTCGATATTGTCATTTGC
GCGCCCCCTCGCCACGACAAGAATGAAGATCACGTGGGAAATTGACTCAG
TCTTCCGTCATCGGGTGCCGTCGATTGTTTGGTGTTGCTTTAGTGTTTAT
GCGTATTTATAGTGAGCGAGGGGAACACGACGTAGCAGCCGGAATGACCT
CCCAAACGCGATCGTCTCGGCAGGCGACCCTCTTCCGACCGAGACGGTAT
ATTATACCTGGCATAGCCCTATTGTTAGTAGTGCGTGCTCTTTTGCGACA
GTCCGCCGGATTGTTCCCCTCAACGCACGTACAGTACATATATGCCAGCC
AATCACGAGCGAGATGACCACCGGGTGTTTACGGCACAACATACCAGCCC
ATAAGCCAGCCCAAAAAACGATTCTTGCTGACTTCCTGTCATTTGATTGG
TTGATTGTCAACCGGTGCCACTACACCCAGCTGGTTAATCCGGCGCCCCC
TCTCTCGCACGCTTACTTGCTATATCGATATGTTGCGTCTGCGTCTTTCT
TTGCATCATTCCGCATGATGATCCAACCCCCTGTTGACTAAGTTGACTAA
GGCAAGCAACAAACGAGTACTCCCCCCCTCCCTCCCTCCCTCCCCATCCT
GCTGCACAAAGGTACGGGACGGATCCATGGCGATCCTGAAAAGCATGTGC
TTTCTCGCGCCTATACACGTCAGGGTGAAGGTGGTCGATTGCCTGGGAGG
CGTGAACGGAATGCTTCGCCTCGTCCAGCTTCCTCGGAACTGTCAAGTCT
ATCAGGTAACTCTGCCGCCTATACTTGGATTTTGTTTTTTTCTGTCACTT
ATAACTTCCCCATCAATCTCACTGAAGCCTTTCTACTCGTCGCTCAGCGA
TCCGGTCTGAGCAACCCGTGGTCACAAGTATCTTCCTTTCTCCCCCCCCC
CTGATACATGCCAACCATTGTTTTTATCATGCCTAACAGTAGCTTTTTGT
CGCGCATAGGATATGTATCTCTATATATATATTATCGTTTTTAATTACAG
ACACATCAGCCGTGCAATTCCGTCCAAACTGGTTTGAGATCCAGGGGATG
ATCGCCAAACTCATTACTACCGTGTGATAGTGGGGTTTCGCATGTAGTAT
TTCAACGGCGTGTCTAGTAGGGGTATACCCGCACCCGGGTACTTTGGAAT
AGTCGTACTGAACGTACTTAATATCCAGGCAGTGTATTGAGAGGCCTGAT
AAACGTGCTATGGTCTCCGGTAGGGTAGATACCCGAGTATTTTATGCGGG
TTTGCAACAACCATCCACGGCATGTCCCTAGGGACATGAACGTTGGAGTA
CCCGTGCGTGTAATTACGCTCTCCCGGCCAAACATCGCTGATAACAACAA
GCTACAACAAGTACTGAGCCCCCCCCCTTCCACCCGCCCCCAACAAAAAC
GATTCTCCCGGGTGGACCTCACTCTATTGACCCCGACAATGCAGGGCCTC
CAAATTCTTCGAAACCTCCTGTACGCGGTTCCTTTCCGGGACCTTTGTCG
CTCAGAGATGCCACCGTCGGGGGAGGGTGGCCCTGAGAGGGCATCATCGG
TGCCAGGCGTAACCACAAGGGAAGCGGCGACGAGCACAAGCGGCGGCGCA
TCGTCCAGCGCTCCTCAGAACCGTTCCCAGGGCGGTTCTCAGAACGATCG
GTCTCAGACCTGGGAGGGGGCGACGGAAAGAGCACGGGGGCGCGACGTGG
CCTCCGTGCGGCGACGGTTTTGGGGCGATCCAGAGCCTTCGGGTAGCGGA
AGTAGTACTGATGGTGGTGGCAGGGGACGCGACAGCAGCCGCCGCAGCGA
GGGTCAGCTAGAGGCGATGGAAGTGGAGGTCCAGCTCGGGCTCGGCACTA
CTACTACGAGCCGAGTTCGCTGTACGAGAGGTGACGCGGCAAGGGGCGAG
GGACGGGAAGGGCGGCTGCTGGCGACGGTTGGGCCAGGGGCGCGAGAAGA
TCGAGATTCTGGCATCGCGAGGCTGATCGACGCCATCTTGGGTAAGCTGG
AGGAGGCGGAGAAGGAAGAGGGCTTCTACGAAGCCAGCTGCGCGGTGAGA
CTTGTATGTGTACGTATGTGTATAGGGGTGCATTGTTTTGGTTTCATACT
GTGCTTTGTTTTTATTCAGACTGGTGTTGCACGCGCGGTACCGTTGGTAA
AAGCTTTTATGGTATGGGTTTGGGCAACCCTTGTCTCGGATACGTATGGG
TCGTAGCGGGTGCATGGCGTGTGTCGCTCCCACCTTTCCTGTGACAATAC
CTTCAACCCAGCAGGGGGTAACCCATGGGTTTGGCTCAGATATCTTCCAA
AATCGGACCACGCGGCTCCCCATCGTCTTGACGGGTATCGAAATGGGCAC
AAGCAGTGCGGCCTGCGACTATGCCTCTCGTTATGCTACGTGTTTCTAAC
GCCACCCCTTATCCTCTCCCGTCTACACCCCCCCCCCCTTGCTTCCTTGC
CCAGGCTCTACACGTTATGCATGCCCTATCTGTCACGAGCGAGTCACAGT
GCGTTGCGCTGAGAACCCCACGAGTGCTCCGCGTGGTCATGCCCTACTGC
ATACCCTTAGCGCGTTCCCGGCATGAACGAAAACGAGACACCGCTGCCCT
GTCGCCGCTAGCACCGTCCGCCCGCACAGCAGCCGCAGAAGCCTCCACCG
CAGAAGAAGAACCAGGAACAGCACGCGGTCTCACCCCGCCCCGCCTTGGG
AACGATCGAAGCAGCAGTAGTAGCAGAAGTAGCAGTGGCAGCAACAGCGG
AAGCGACTCGGGCGTGCCGCCGCACGAGTCAGCCGATATCGCGGCCCGAT
TGTTACTGACGCAGTTGATACCGGAAAGGACGGGCGGCGAGATGACGGCG
GCTATTAGAGCGTTCACGGCGGCGATGGCGGCGGCGCCTGCTGCG
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Coding sequence (CDS) from alignment at D-herbacea_F_contig10:410506..413800+

>mRNA_D-herbacea_F_contig10.137.1 ID=mRNA_D-herbacea_F_contig10.137.1|Name=mRNA_D-herbacea_F_contig10.137.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=2748bp|location=Sequence derived from alignment at D-herbacea_F_contig10:410506..413800+ (Desmarestia herbacea DmunF female)
ATGGGGCGGCCGGGCGGGAGTGGTGGGTGCGGCGAGGAGGGGGGCGTGAG
CGGAGAGGTGTGGAGTCTTGCGGCGAGGGGATTGGCTAACATGGCGCTGG
AGCACGAGATGGCGAAAGAGGCCATTGCCGAGTCCGAGTGTCTCCGGAGG
GTTTGCAACCATGCTATCCGTGATTGCACAGAGGACAAGATGGGGCGGCC
GGGCGGGAGTGGTGGGTGCGGCGAGGAGGGGGGCGTGAGCGGAGAGGTGT
GGAGTCTTGCGGCGAGGGGATTGGCTAACATGGCGCTGGAGCACGAGATG
GCGAAAGAGGCCATTGCCGAGTCCGAGTGTCTCCGGAGGGTTTGCAACCA
TGCTATCCGTGATTGCACAGAGGACAAGGTACGGGACGGATCCATGGCGA
TCCTGAAAAGCATGTGCTTTCTCGCGCCTATACACGTCAGGGTGAAGGTG
GTCGATTGCCTGGGAGGCGTGAACGGAATGCTTCGCCTCGTCCAGCTTCC
TCGGAACTGTCAAGTCTATCAGGTACGGGACGGATCCATGGCGATCCTGA
AAAGCATGTGCTTTCTCGCGCCTATACACGTCAGGGTGAAGGTGGTCGAT
TGCCTGGGAGGCGTGAACGGAATGCTTCGCCTCGTCCAGCTTCCTCGGAA
CTGTCAAGTCTATCAGGGCCTCCAAATTCTTCGAAACCTCCTGTACGCGG
TTCCTTTCCGGGACCTTTGTCGCTCAGAGATGCCACCGTCGGGGGAGGGT
GGCCCTGAGAGGGCATCATCGGTGCCAGGCGTAACCACAAGGGAAGCGGC
GACGAGCACAAGCGGCGGCGCATCGTCCAGCGCTCCTCAGAACCGTTCCC
AGGGCGGTTCTCAGAACGATCGGTCTCAGACCTGGGAGGGGGCGACGGAA
AGAGCACGGGGGCGCGACGTGGCCTCCGTGCGGCGACGGTTTTGGGGCGA
TCCAGAGCCTTCGGGTAGCGGAAGTAGTACTGATGGTGGTGGCAGGGGAC
GCGACAGCAGCCGCCGCAGCGAGGGTCAGCTAGAGGCGATGGAAGTGGAG
GTCCAGCTCGGGCTCGGCACTACTACTACGAGCCGAGTTCGCTGTACGAG
AGGTGACGCGGCAAGGGGCGAGGGACGGGAAGGGCGGCTGCTGGCGACGG
TTGGGCCAGGGGCGCGAGAAGATCGAGATTCTGGCATCGCGAGGCTGATC
GACGCCATCTTGGGTAAGCTGGAGGAGGCGGAGAAGGAAGAGGGCTTCTA
CGAAGCCAGCTGCGCGGGCCTCCAAATTCTTCGAAACCTCCTGTACGCGG
TTCCTTTCCGGGACCTTTGTCGCTCAGAGATGCCACCGTCGGGGGAGGGT
GGCCCTGAGAGGGCATCATCGGTGCCAGGCGTAACCACAAGGGAAGCGGC
GACGAGCACAAGCGGCGGCGCATCGTCCAGCGCTCCTCAGAACCGTTCCC
AGGGCGGTTCTCAGAACGATCGGTCTCAGACCTGGGAGGGGGCGACGGAA
AGAGCACGGGGGCGCGACGTGGCCTCCGTGCGGCGACGGTTTTGGGGCGA
TCCAGAGCCTTCGGGTAGCGGAAGTAGTACTGATGGTGGTGGCAGGGGAC
GCGACAGCAGCCGCCGCAGCGAGGGTCAGCTAGAGGCGATGGAAGTGGAG
GTCCAGCTCGGGCTCGGCACTACTACTACGAGCCGAGTTCGCTGTACGAG
AGGTGACGCGGCAAGGGGCGAGGGACGGGAAGGGCGGCTGCTGGCGACGG
TTGGGCCAGGGGCGCGAGAAGATCGAGATTCTGGCATCGCGAGGCTGATC
GACGCCATCTTGGGTAAGCTGGAGGAGGCGGAGAAGGAAGAGGGCTTCTA
CGAAGCCAGCTGCGCGGCTCTACACGTTATGCATGCCCTATCTGTCACGA
GCGAGTCACAGTGCGTTGCGCTGAGAACCCCACGAGTGCTCCGCGTGGTC
ATGCCCTACTGCATACCCTTAGCGCGTTCCCGGCATGAACGAAAACGAGA
CACCGCTGCCCTGTCGCCGCTAGCACCGTCCGCCCGCACAGCAGCCGCAG
AAGCCTCCACCGCAGAAGAAGAACCAGGAACAGCACGCGGTCTCACCCCG
CCCCGCCTTGGGAACGATCGAAGCAGCAGTAGTAGCAGAAGTAGCAGTGG
CAGCAACAGCGGAAGCGACTCGGGCGTGCCGCCGCACGAGTCAGCCGATA
TCGCGGCCCGATTGTTACTGACGCAGTTGATACCGGAAAGGACGGGCGGC
GAGATGACGGCGGCTATTAGAGCGTTCACGGCGGCGATGGCGGCGGCGCC
TGCTGCGGCTCTACACGTTATGCATGCCCTATCTGTCACGAGCGAGTCAC
AGTGCGTTGCGCTGAGAACCCCACGAGTGCTCCGCGTGGTCATGCCCTAC
TGCATACCCTTAGCGCGTTCCCGGCATGAACGAAAACGAGACACCGCTGC
CCTGTCGCCGCTAGCACCGTCCGCCCGCACAGCAGCCGCAGAAGCCTCCA
CCGCAGAAGAAGAACCAGGAACAGCACGCGGTCTCACCCCGCCCCGCCTT
GGGAACGATCGAAGCAGCAGTAGTAGCAGAAGTAGCAGTGGCAGCAACAG
CGGAAGCGACTCGGGCGTGCCGCCGCACGAGTCAGCCGATATCGCGGCCC
GATTGTTACTGACGCAGTTGATACCGGAAAGGACGGGCGGCGAGATGACG
GCGGCTATTAGAGCGTTCACGGCGGCGATGGCGGCGGCGCCTGCTGCG
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