|
|
Homology
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: A0A835YV88_9STRA (Flavoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV88_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.750e-64 Identity = 108/210 (51.43%), Postives = 147/210 (70.00%), Query Frame = 2
Query: 77 MDDKGEGAQVGTKPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGNGALAPVESICEAVKEILSASQA 706
M + EG + +P++LL +GSVA +K+P+L ++L EFA+VKI+ T AS FLD + Y+ ++ + AL+PP+EVL D+ E+G W VGDPV H++LR WAD+ L+APLSANT+ K+ANG+CDNL+TCVAR WD KP + APAMNT MW HP+T+RH++ + LG+ I P K LACGD G GALA V I AV+ L + A
Sbjct: 1 MPEDSEGERHLHRPRILLGATGSVATVKIPRLALLLQEFADVKIIVTKASRAFLDCARDYDRPSYDAWSALEPPMEVLADEGEWGMWSKVGDPVQHVQLREWADLLLIAPLSANTLGKLANGLCDNLLTCVARAWDVT--KPLIVAPAMNTHMWSHPLTARHLASLGVLGVTTISPVVKTLACGDTGTGALADVADIAAAVRAALLSDAA 208
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: A0A067CM62_SAPPC (Flavoprotein domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CM62_SAPPC) HSP 1 Score: 209 bits (533), Expect = 2.380e-60 Identity = 103/194 (53.09%), Postives = 147/194 (75.77%), Query Frame = 2
Query: 113 KPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKE-LGIVVIPPATKVLACGDRGNGALAPVESICEAVKEIL 691
+P+VL+ SGSVA IKVP+LVV LAE+AEV++V T ++ FL ++ +YN A F+AL+ + + +D+DE+ AW +GDP+LHI+LR+WADV ++APLSAN+MAK+ANG+CDNL+TCVAR W + KP + APAMNT MW HP T +HV+++++ G VIPP +K+LACG+ GNGALA ++ I V+ +
Sbjct: 6 RPRVLVAASGSVATIKVPELVVKLAEYAEVQVVLTKSANFFLPKAAAYNPTMFAAFEALN--VTIHRDEDEWNAWNVIGDPILHIQLRDWADVCVVAPLSANSMAKLANGLCDNLLTCVARAW--SQSKPLLVAPAMNTQMWAHPCTGKHVTILQDDFGYRVIPPVSKMLACGETGNGALAAIDDIVAHVRRTI 195
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: A0A6G0XST1_9STRA (Flavoprotein domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XST1_9STRA) HSP 1 Score: 212 bits (540), Expect = 4.230e-60 Identity = 102/194 (52.58%), Postives = 145/194 (74.74%), Query Frame = 2
Query: 110 TKPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGNGALAPVESICEAVKEIL 691
T+P++LL SGSVA +KVP+L V L+ A+V+IV T A+ FL ++ +YN D + +F+ L +E+L D+DE+GAW +GDPVLHI+LR+WAD+ ++PLSANTMAK+A+G+CDNL+TC+ R W + +KP + APAMNT M+ HP T + + +M+E G +IPP K LACG+ GNGALAPVE+I +A+ L
Sbjct: 91 TRPRILLAASGSVATVKVPELAVKLSAVADVRIVLTKAATFFLAKASAYNPDMYEQFQTLQ--LEILHDEDEWGAWNSMGDPVLHIQLRDWADILCISPLSANTMAKLAHGLCDNLLTCIVRAW--SCRKPLLVAPAMNTQMYLHPATGKQLGLMREYGYDIIPPVCKTLACGEIGNGALAPVETIHDAILAAL 280
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: W4GS25_9STRA (Flavoprotein domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GS25_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.310e-58 Identity = 109/211 (51.66%), Postives = 141/211 (66.82%), Query Frame = 2
Query: 59 AWRATTMDDKGEGAQVGTKPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGNGALAPVESICEAVKEIL 691
A T D+ +P+VLL SGSVA +KVP L V LA A+V++V T A+ FLD++ +Y+ +AHA F AL PI L+D DE+ AW +GDPVLHI LR+WADV +APLSANTMAK+A G+CDNLVTCVAR W A KP + APAMNT M+ HP T H+ +++ G ++ P +K LACG+ GNGALA V++I V L
Sbjct: 117 AHHVLTDDNTSSSTDQPRRPRVLLAASGSVATVKVPALAVQLAAVADVRVVVTKAAQFFLDKAATYDPEAHAAFIALSLPI--LRDDDEWNAWSSLGDPVLHIHLRDWADVMCIAPLSANTMAKLAGGLCDNLVTCVARAWSTA--KPLIVAPAMNTQMYAHPATESHLHLLRSFGYSIVSPVSKTLACGEVGNGALASVDTIVGTVVRSL 323
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: K3WBB5_GLOUD (Flavoprotein domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBB5_GLOUD) HSP 1 Score: 204 bits (519), Expect = 2.830e-58 Identity = 102/176 (57.95%), Postives = 130/176 (73.86%), Query Frame = 2
Query: 113 KPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGN 640
KP++LLC SGSVA +KVP+L + LAEFAEVK+V T A FL + YN A F A PIEV++D+ E+ AW+ VGD VLHIEL++WADV LLAP+SANT+AK+ANG+ DNL+TC+AR W+ +K FV APAMNT MWDHP+T+RH+ + E G +IPP K+LACG G
Sbjct: 11 KPRILLCASGSVATVKVPELALKLAEFAEVKLVVTKAGDFFLQKVSEYNPSAWGAFTARAEPIEVIRDEHEWDAWRVVGDSVLHIELKDWADVLLLAPMSANTLAKIANGLSDNLLTCIARAWNV--RKSFVYAPAMNTDMWDHPVTARHLRTLGEFGYEMIPPVEKMLACGVVGK 184
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: A0A024TQ70_9STRA (Flavoprotein domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQ70_9STRA) HSP 1 Score: 208 bits (529), Expect = 9.340e-58 Identity = 108/202 (53.47%), Postives = 145/202 (71.78%), Query Frame = 2
Query: 92 EGAQVGTKPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGNGALAPVESICEAV-KEILS 694
E A ++P+VLL SGSVA +K+P L V LA A+V+I+ T A+ FLD + +Y+ AHA F AL PI L D DE+ AW +GDPVLHI+LR+WADV +APLSANTMAK+A+G+CDNL+TCVAR W + KP + APAMNT M+ H +TS +++++ G V+PP +K LACG+ GNGALA V++I AV + I+S
Sbjct: 127 EDATKSSRPRVLLAASGSVAAVKIPALAVQLAAVADVRILVTKAATFFLDMAAAYDPVAHAAFDALALPI--LHDDDEWSAWSSLGDPVLHIQLRDWADVLCIAPLSANTMAKLAHGLCDNLLTCVARAW--SPTKPVIVAPAMNTQMYQHRVTSSQLALLRSFGYTVVPPVSKTLACGEVGNGALAAVDTIVAAVVRSIVS 324
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: A0A5N6R758_9ROSI (Flavoprotein domain-containing protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A5N6R758_9ROSI) HSP 1 Score: 201 bits (512), Expect = 5.030e-57 Identity = 104/210 (49.52%), Postives = 140/210 (66.67%), Query Frame = 2
Query: 77 MDDKGEGAQVGT---KPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGNGALAPVESICEAVKEILSA 697
+ ++GE QV T KP++LL SGSVA IK L AE+AEV+ VAT AS+HF+DR+ +L + + D+DE+ +W+ +GD VLHIELR WAD+ ++APLSANT+ K+A G+CDNL+TC+ R WD++ KPF APAMNT MW++P T RH+ + ELGI +IPP TK LACGD GNGA+A I V+ L +
Sbjct: 7 VSEEGEPMQVNTAPRKPRILLAASGSVAAIKFGHLCSCFAEWAEVRAVATHASIHFIDRA------------SLPKDVVLYTDEDEWSSWKKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYS--KPFFVAPAMNTLMWNNPFTERHLMSIDELGISLIPPVTKRLACGDYGNGAMAEPSLIYSTVRLFLES 202
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: UPI000A2A9CAF (phosphopantothenoylcysteine decarboxylase n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9CAF) HSP 1 Score: 201 bits (510), Expect = 5.350e-57 Identity = 101/206 (49.03%), Postives = 138/206 (66.99%), Query Frame = 2
Query: 80 DDKGEGAQVGTKPKVLLCLSGSVAVIKVPQLV--VMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGNGALAPVESICEAVKEIL 691
+D E + +K +VL+C++GSVA +K+ QLV ++L+ EV++VAT S HF FK + P++V +DKDE+ W+ + DPVLHIELR WADV ++APL ANTMAK++ G+CDNL+TC+ R WD KKP + PAMNTCMWDHP+T+ HVS++ LG + +PP K LACGD G GA+A V I E V + L
Sbjct: 3 EDVRESISLPSKKRVLICVTGSVATVKLGQLVGELLLSNKVEVQVVATENSTHF--------------FKTEEIPVKVYRDKDEWQGWKKMRDPVLHIELRKWADVMVIAPLDANTMAKISTGICDNLLTCIVRAWDM--KKPLIFCPAMNTCMWDHPLTNTHVSVLCNLGYIYVPPIAKTLACGDTGVGAMADVRCIVETVLQSL 192
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: A0A4D9D302_9STRA (Flavoprotein domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D302_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.220e-56 Identity = 101/198 (51.01%), Postives = 143/198 (72.22%), Query Frame = 2
Query: 113 KPKVLLCLSGSVAVIKVPQLVVMLAEFA--EVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMK-ELGIVVIPPATKVLACGDRGNGALAPVESICEAVKEILSA 697
+P+VLL +GSVA +K+P+L + L+ A EVK+ T A+ HF + + YN A A F+ L +EVL+DK+E+ AW +GDPVLHI+LR+WAD+ L+APLSANT+ K+A+G+CDNLVT + R WD +KP + APAMNT MW+HP T++ + M++ +L VIPP +K+LACGDRG G LA +E + AV++ L A
Sbjct: 11 RPRVLLAATGSVATVKIPELALRLSLVAGAEVKVALTKAARHFWECAKVYNPAAWASFQELGGRVEVLEDKNEWDAWNAMGDPVLHIQLRDWADLLLIAPLSANTLGKLAHGLCDNLVTSIVRAWD-VKRKPVLLAPAMNTHMWEHPFTAQQLRMLQTDLHYAVIPPVSKLLACGDRGQGGLAAIEDLVRAVQDQLQA 207
BLAST of mRNA_D-herbacea_F_contig1.117.1 vs. uniprot
Match: F0YJ52_AURAN (Flavoprotein domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ52_AURAN) HSP 1 Score: 206 bits (524), Expect = 1.970e-56 Identity = 103/196 (52.55%), Postives = 143/196 (72.96%), Query Frame = 2
Query: 104 VGTKPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAASVHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELRNWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMNTCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGNGALAPVESICEAVKEIL 691
VG +P+VLL +GSVA +KVP+L + L+E A+V++V T + FL ++ +Y+ A A F+A IEVL D DE+ AWQ +GD V+H+ELR WAD+ ++APLSAN++AK+ANG+CD+L++C AR WDF KPFV APAMNT MW HP+T+ H++ ++ LG+ +PPA+K LACGD G GALA V +I A L
Sbjct: 205 VGRRPRVLLGATGSVATVKVPKLALALSEVADVRVVVTEKAKTFLAKAEAYDAAAWATFQA--SGIEVLSDADEWDAWQEIGDDVVHVELRKWADLLVIAPLSANSLAKLANGLCDDLLSCTARAWDF--DKPFVVAPAMNTAMWTHPLTATHLADLRVLGVAAVPPASKKLACGDVGPGALADVPAIVAAAGAAL 396
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 209.9 |
| Seed ortholog evalue | 1.1e-51 |
| Seed eggNOG ortholog | 115417.EPrPW00000023206 |
| Preferred name | PPCDC |
| KEGG rclass | RC00004,RC00039,RC00219,RC00332,RC00822,RC02725 |
| KEGG ko | ko:K00560,ko:K00652,ko:K01598 |
| KEGG Reaction | R02101,R03210,R03269,R10124 |
| KEGG Pathway | ko00240,ko00670,ko00770,ko00780,ko01100,ko01523,map00240,map00670,map00770,map00780,map01100,map01523 |
| KEGG Module | M00053,M00120,M00123,M00573,M00577 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000166,GO:0001558,GO:0003674,GO:0003824,GO:0004633,GO:0004799,GO:0004857,GO:0004864,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006950,GO:0006970,GO:0006972,GO:0007346,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009150,GO:0009152,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009259,GO:0009260,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009628,GO:0009651,GO:0009892,GO:0009966,GO:0009987,GO:0010181,GO:0010563,GO:0010605,GO:0010646,GO:0010921,GO:0010923,GO:0015936,GO:0015937,GO:0016043,GO:0016740,GO:0016741,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0018130,GO:0019208,GO:0019212,GO:0019220,GO:0019222,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0019725,GO:0019888,GO:0022607,GO:0023051,GO:0030003,GO:0030004,GO:0030234,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032259,GO:0032268,GO:0032269,GO:0032515,GO:0032553,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035303,GO:0035304,GO:0035305,GO:0035308,GO:0036094,GO:0040008,GO:0042083,GO:0042538,GO:0042592,GO:0042802,GO:0043086,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043666,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045936,GO:0046073,GO:0046385,GO:0046390,GO:0046483,GO:0048037,GO:0048519,GO:0048523,GO:0048583,GO:0048878,GO:0050662,GO:0050789,GO:0050790,GO:0050794,GO:0050801,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051186,GO:0051188,GO:0051246,GO:0051248,GO:0051259,GO:0051260,GO:0051336,GO:0051346,GO:0051726,GO:0055067,GO:0055080,GO:0055082,GO:0055086,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070206,GO:0070207,GO:0071513,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0097159,GO:0097367,GO:0098771,GO:0098772,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990143 |
| EggNOG free text desc. | Phosphopantothenoylcysteine decarboxylase. Source PGD |
| EggNOG OGs | 1MDRS@121069,COG0452@1,KOG0672@2759 |
| Ec32 ortholog description | Flavoprotein |
| Ec32 ortholog | Ec-03_000890.1 |
| EC | 2.1.1.45,2.3.1.47,4.1.1.36 |
| COG Functional cat. | DP |
| Best tax level | Pythiales |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01007 |
| Exons | 6 |
| Model size | 1987 |
| Cds size | 633 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927397.271724-UTR-D-herbacea_F_contig1:2904569..2904645 | 1622927397.271724-UTR-D-herbacea_F_contig1:2904569..2904645 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1 2904570..2904645 + |
| 1690790147.2159066-UTR-D-herbacea_F_contig1:2904569..2904645 | 1690790147.2159066-UTR-D-herbacea_F_contig1:2904569..2904645 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1 2904570..2904645 + |
| 1622927397.3529308-UTR-D-herbacea_F_contig1:2922781..2924059 | 1622927397.3529308-UTR-D-herbacea_F_contig1:2922781..2924059 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1 2922782..2924059 + |
| 1690790147.2977612-UTR-D-herbacea_F_contig1:2922781..2924059 | 1690790147.2977612-UTR-D-herbacea_F_contig1:2922781..2924059 | Desmarestia herbacea DmunF female | UTR | D-herbacea_F_contig1 2922782..2924059 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622927397.2820344-CDS-D-herbacea_F_contig1:2904645..2904768 | 1622927397.2820344-CDS-D-herbacea_F_contig1:2904645..2904768 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2904646..2904768 + |
| 1690790147.231689-CDS-D-herbacea_F_contig1:2904645..2904768 | 1690790147.231689-CDS-D-herbacea_F_contig1:2904645..2904768 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2904646..2904768 + |
| 1622927397.2946646-CDS-D-herbacea_F_contig1:2917964..2918135 | 1622927397.2946646-CDS-D-herbacea_F_contig1:2917964..2918135 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2917965..2918135 + |
| 1690790147.2413971-CDS-D-herbacea_F_contig1:2917964..2918135 | 1690790147.2413971-CDS-D-herbacea_F_contig1:2917964..2918135 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2917965..2918135 + |
| 1622927397.3100019-CDS-D-herbacea_F_contig1:2919286..2919376 | 1622927397.3100019-CDS-D-herbacea_F_contig1:2919286..2919376 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2919287..2919376 + |
| 1690790147.2557395-CDS-D-herbacea_F_contig1:2919286..2919376 | 1690790147.2557395-CDS-D-herbacea_F_contig1:2919286..2919376 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2919287..2919376 + |
| 1622927397.322543-CDS-D-herbacea_F_contig1:2920156..2920254 | 1622927397.322543-CDS-D-herbacea_F_contig1:2920156..2920254 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2920157..2920254 + |
| 1690790147.2719822-CDS-D-herbacea_F_contig1:2920156..2920254 | 1690790147.2719822-CDS-D-herbacea_F_contig1:2920156..2920254 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2920157..2920254 + |
| 1622927397.3315744-CDS-D-herbacea_F_contig1:2921693..2921770 | 1622927397.3315744-CDS-D-herbacea_F_contig1:2921693..2921770 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2921694..2921770 + |
| 1690790147.2804346-CDS-D-herbacea_F_contig1:2921693..2921770 | 1690790147.2804346-CDS-D-herbacea_F_contig1:2921693..2921770 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2921694..2921770 + |
| 1622927397.343799-CDS-D-herbacea_F_contig1:2922707..2922781 | 1622927397.343799-CDS-D-herbacea_F_contig1:2922707..2922781 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2922708..2922781 + |
| 1690790147.288976-CDS-D-herbacea_F_contig1:2922707..2922781 | 1690790147.288976-CDS-D-herbacea_F_contig1:2922707..2922781 | Desmarestia herbacea DmunF female | CDS | D-herbacea_F_contig1 2922708..2922781 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1.117.1 >prot_D-herbacea_F_contig1.117.1 ID=prot_D-herbacea_F_contig1.117.1|Name=mRNA_D-herbacea_F_contig1.117.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=211bp
MDDKGEGAQVGTKPKVLLCLSGSVAVIKVPQLVVMLAEFAEVKIVATAAS VHFLDRSVSYNLDAHAKFKALDPPIEVLQDKDEFGAWQGVGDPVLHIELR NWADVALLAPLSANTMAKVANGMCDNLVTCVARTWDFASKKPFVAAPAMN TCMWDHPMTSRHVSMMKELGIVVIPPATKVLACGDRGNGALAPVESICEA VKEILSASQA* back to topmRNA from alignment at D-herbacea_F_contig1:2904570..2924059+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-herbacea_F_contig1.117.1 ID=mRNA_D-herbacea_F_contig1.117.1|Name=mRNA_D-herbacea_F_contig1.117.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=19490bp|location=Sequence derived from alignment at D-herbacea_F_contig1:2904570..2924059+ (Desmarestia herbacea DmunF female) GATAGGTGTCAGCAATTCTAGTGCACGCAGCCAGAGTCGGGTAGCTCACT
CAGTAATTGCTTGGCGTGCCACCACCATGGATGACAAAGGAGAGGGCGCT
CAAGTCGGCACGAAGCCGAAGGTTTTGCTGTGCCTGAGTGGAAGCGTTGC
CGTGATCAAAGTTCCCCAGCTGGTCGTCATGCTCGCGGAGTTTGCAGAGG
TTGGTCAAGCCAAGCCATTTCGATACGACCACCTGTACAGTAGTACAGCA
CGATATGTTGGATTCTTCTCTGGAATTAAAGAATAGTCTATACTCGTAGC
GAATGCGATAGAGAGACCTACAAAAAGCAAGTGGACAACCAACAACTAAC
AAGCCGGACAGGTACAGCAGCAGCACTACTAGCACAAGTAGTAGTCAGCA
GTATCATGGTAGCAGCATGTATGATGTGTATGATGTATAATGATTGATAC
ACGCACCGATATTTTCTAAAGTGACCGGACTGTTGTTGCAGTCGATGGTA
CTATCACGGACCATAGGGACGGTGCCATCTGCAGTGATGCTCACAATCGG
GCATAAAGACACCATAAATAAAATTGGTGTGATGGTGATACCGATAACGC
TGTTGCCTTCGTACATAGTATGCCATAGCCTTCGTATCTAGTGTGCGTGG
TGAGTGTGAATTCGTGTAGTATAGGTTCAGGTACGTACACATGATGTGAA
AACGTCACACATGTACAGCTAGTTCCCGTCCCCCTCCGAAAGATTATGAT
CCAGTGCACACGATAATGGGACTTGTTTCCCAAAATTATCCTGTAGAGCC
TGGGACACCCCAGGGGAGTCATTGCGTCATAACTTATCTGAGGACCGATA
GAATCCGCGCGACCGATGTATCACACAGTGTGGTTGACGATTATCCCCTG
GCCCCCGAACCAGTTTGGAACGTCACGGCTGATGTTTTTGTAAGTTAAAT
AATAAAGATGAAAGAGCGGGGCACCCGACCTTTATACTATAATACTATGA
TACGAACTATGATACGACTGTACTATCGTATGATTATTTTTGCATACAAA
GACATCTGCCGTCGTGACGTTCCAAACTGTTAGAGGGGCCATAGTACATG
CATGATACCTATACCTATATCATCTAGTATGATTTGATGTACTGCAGTGG
TATTGATTTCTCGCGTTCATGCATTAGCTCATCGTCCAAGATCTTCGGGG
GCCCATAGTACATGCGTGATACCTATATCATATAGTATGATTTGATGTAC
TGCAGTGGTATTGATTTCTCACATTAGCTCATCGTCCAAGATCTAGCCCG
CGGTCACACAAGTGCTGAGCCCTATCACTATGTAGGAAGATCCGGAAAAC
ACGGAAAAAAAAGCAAAAAGAAGGGGTACACAGGACCGAATAGGTACACC
AACTCATACTGGTAGTGTTAGTAGATCAGTTTACACATCGCCCAGTATGA
GTTGGTGTACCTATTCGGTCCTGTGTACCCCTTCTTTTTGCTTTATTTTT
TTTTTCTGTGTTTTCCGGATCTTTCTACATAGGGCTCAGCACTTTTGTGA
CCACGGGCTAGATCTTGGACGATGAGCTAATGTGATGAATCAACAACAAA
CTGGGCGATGTGTAAACTGACCTACTAACACTACCGCAGGTATCAATTCG
ACTACGACACCCGCCGTGTTCTCCCCCCGTTCCCACTACTAACGAACTCA
TGGCTGCTGGCTACAGCAGTTAGTTGCCGTCTGGAGTGCTGCATGCACCG
TATACACGAAGCACGGTGGTAAATTAACCCGGAAATAAAAACAAGACAAA
GGGGATACACCACAATTTTTCTGCCGTCTGAAGTGGAGTGCTGTCAGAAT
GACGACCCGCGGGCAATGCAGTGAAAAAAGAACCACCAACCAAAGCCACC
AAAGTAATCGACAATCACCAGGTATGTCTTTCCCGAGCCGTCGATAGTAG
GCATATAGTATCCACGTTACTGATATTGCAAGGGTGTCGTTCCACAAGAA
AGGGTGCAACGCAGGCAACAATTAAATAGGCCGCGGAGGTAACACAAGCA
TTTCTACCGCATGTCTACAAACCAGAATCAACAAGTACCCCTCCAAAGAG
GTCCACAGAAAAACGAAGTTATTGCAACAGCCATGGTGTGCGCCGTCGCG
GTGCCAATCTTGCCCGCGTGCTGCTGCTGATGTCGCCCATGGCCACCCCC
AGCACCATCAACCTCGACCCGCTCCATGGTCACGCCCAGCACCATCAATG
TCGGCCTGCTCCGGACGCATGCTCTTGTTGTTGCTCCTTTCTAGCCGGTT
CCTTTCTCAGCTACGTAGCTCCTCCTTGCACTTGAGGTGCTGGTCTTATG
AAAAAAAGGTTCACGCTCAGGGTGTGTTTAACCACGTTCTTCCCCGTTCG
TCGCCGCTCGTCTCCCTCCCACTTTGGCGGCGAATCCGGCTTCTGGACGG
CATAGCTCCCTCTCTGCATCCTAGACCGTGCCGTCTTTCAACCTATGGTG
GCGCCTGCCTCCGCGCACAAACGATATTTAGGATGCACATTACTGTACTG
CCGCTGTTGCCAAAAGGCCCGCAGATCCGCACGTTTGTGCCTGACGCACC
AATTCGACCCAACTCTACCGCTACGCCTGGGTACGCGACCACAGGGCAGC
GCCAAGAAGGTATCACTCCTTGAGCGTGAGTCCGGCCTTTCACCCGCCAG
AAAGACCTACCCCATGCGCTATGGGCCATGCCGAACAGCAAGCAGGCCTT
GTCGAGGCAGCGAGGGTATAGTTTTGTAGTATTAATAGTGGTGGTAATAT
GAGTAGGTAGTATATGATCGTAGGTAGAAATCCTATTATTTTATTGAATG
AAATGCCAAAATTTAATTATCGATATTTGTCTTCCCTCTTTCCCGAAATT
GATTAATTACTATACTTGGTATGTCTTCTCGGGAGTCAGTCCAATAGGGC
GAAGATAAATGGGACGGAGAAAAAAAAAAAAAAAAGTCTAAAGTGAATTC
ATACTATGATATTTCAATATTCGGTAGAAATCCTATTATTAGAATGAAAC
GCACAAATTTAATTATTTGTCTTCCCTCTTTCCCGAAATTCATTAATTAT
TATACTTGGTACGTATTCTCCGCAGTCAGTCCAATAGGGCGAAGATGAAT
GGGACGGAGAAAAAAAAAAAAAAAAAGTCTAAAGTGAATTCATACTATCA
CGAGGGCCCCTAATACATAGGCCCGGAACACTTATTATATTGACGTGTGT
ATCGCGAGACAAGACAGGCGCGGCGTGAACCGCGGATCTCGTGCGTTTTC
ATCATGCGGTAGCAGTAGACTTATCAACGATGCTGATGCTACAGTTTCAG
GGGGGGGGGGGATCGGGGAGGATGTTTGCTTCCCCTTTGTCACCTTGTTT
TGGGGCTATTTCTTATGGGCCTCTGTTTATGTGATATTTCAAGACATTAA
TTAATGTTCACTTTCGTAGGAGACGACACAGTAGTAGTACTTCGTATATT
ACTACTGTACTACTACTACTGTTGTTGTTGTTGTTGTTGTTGTTCTTGTC
TTTACATTAAAAGTCGTACATTCCACCCTACGACATCCAGCAGCGTACTC
AGAGTCTGTTCTGGATCTTCCATCCTAGAAAGACACGAAATTCCGTGATC
ACAGGTTAACATATCAAACAAATCGCAAAAAAACATGTAAGAGAGAAGTA
AAGAAATAAAACAAAAGAGAGAGAAGAACAGAAACAAAAAAGATGGGAAT
AAACAATAAAGAAGGGAGCAAAACATGCCACAGGACTAACGGAGGCAGAA
CGAAGAGCAGAACGTCAACGATACTTGGGGCTACGGGAGGGCGGTACGGG
AACTGTTAAGTCACACTGAAACATATCTACCCGGTTTGCCATCTCCTCCT
TACTCTCATCGGCGGCAGTAATAATATTACTGCTACTACTGCCCCCTCCC
GGTCCCCATCTTGCTACTTCGGGCTTCCCCGGCCTCTTCGCGTGACGTGC
ACTACTCTTCGCCGCTTCCTCTTTGTGCCACGTCTCCATGAAAGTTTGTG
CTCCTTCCATGACCCCCCTGTACCGCCTTCCCCACTGGACGGCCGCTCTT
GTCCGCGTCACAGTTTCCACTCCAAACACCAGTGACGGGTTCTTTGTCGA
CTCCCCCCTGGAGATGGCACCGAAAGCTCGGAAATCATCCGAGAGGCATT
GGGCCCAGTTCTTGGCCGGTCTACCGCGTCCCGGGAGAAAAAAAGTCTCA
AGTGAATTCATACTAATTCATGACGTTATCACGAGGCCCCCACATAAATA
GGCCCTAAACACTTATATTGACGTGTATATCGCGAGACAGACGAGGCGTG
AATCACGGACCTCGTTCGGTTCTATCATGCGGGTGCGGCAGTAGACTTAT
CAACCATGCCACATTTTGATTTTTCGGGGGTGGGGGGGAGGGATGTTTGC
TTCCAATTTTTTCGCCCTGTTTGGGGCCTATTTCTTATGGGCATCTGTGA
TAGTTAATTGTACTTTCGTAGGAGACGACACATTATATTACTGTTGTTGT
GGTCTTCACATTAAAAGTCGTCCATTCGGGACCCTGGGCTATCACCCAGA
ACCCACCCATAACTTTTTGTTTCTATCGCTATAGGCTTTCCCAGTCTATT
TGATATACATATTGTATCCGGTATGATGGTATGCTCCTTGCACCTGCTGT
GACCACGGGTTCGAGGGATCGGACTAACGTGACGATAATAATAATAATAA
TAATAATAACAATTCCACCCTACGACATCCAGTAGCGTACTTAGAGTCTG
TACTGGATCTTCCATCCTAGAAGGACACGGAATTCCGTGGTCACAGGCTA
ACATATCAAACAAATCGCAAAAAACATAAAAAAAAAGAAGAAAAGTAAAT
AAACCAAAATAAAAAAAAGAGAAGGACCGAAAGAAAAAAGATGCGATATA
GAAGCGAGCAAAACATGACACAGGACAAACGGAGGCAGAACGAAGACAGA
ACGAAGAGCAGAACGTCAACGATACTTGTGGCTACGGGAGGGAGGTACGG
GGACTGTTAAGTCACACTGAAACATTTCTACCCGGTTTGCCATCTCCTCC
TTGCTCTCATCGGTGGCAGTAATAATATTACTGGTACTACTGCCCCTCCC
GGTCCCCATCTTGCTATGTCGGGCTTCCCCGGCCCTCTTCGCGTGACGTG
CACTGCTCTTCGCTGCTTCCTCTTTGTGCCACGTCTCCATGAAGGTTTCT
ACTCCTTCCGTGACCCCCCTGTATCACCTTCCCCACTCGACCGCCGCTCT
TGTCCACGTCACAGTTTCCACTCCAAACACCAGTGACGGGTTCTCCGTCG
ACTAGATCGGTTTATGTACTGACTGTGTTGGTATAGTTGTTGTGTAGTAT
TAATAGTAGTGGTAGCAATAGTTTGTAGTTAGTAGGTAGAAATTCTATTA
ATAATAGTATGAAACGCCAAAAAATTAATTAAGTGACCCAGTGGTCTAAT
GGCTAGGGTATTTCCTCTGTTGGCGGAAGTTGAGGGTTCGATTCCCGGTG
GCACATTTCTGTGTCATTTTCCGTCGCGGAAAACGCGAGAGCGGGAGTAA
GCACATATCGATGAAAGTCGACGAGGGAAGAAAGCGCGGCACTCTTCTCG
CGAAAAAAATGTAGGCACGTACCGTAGTGGGAAGGCAGGAGGAGCGCCTG
CTATGTGACCCCGGATCTGAGTAACGAAGAGAGATGGAGCTAGAGATAGA
ATCGGGCGAAGACATTAAATGGGACGAAAAAAAAAAAAAAAAGTTCAAGA
CATGAATTACTTTTCACATCCGTAGGAGACGATACAGTAATTCTACTTCG
TATTAATATAGAATCCGCACGACCGATGTATCACACAGTGAGGTTGACGA
TTATCCCCTGGCCCCCGAACCAGTTTGGAACATCACGGCTGAGGTCTTCT
TATAATAGTACGAGTTTTTCGTTACTTGTTTGTTGTAGTATGTTAGAGTA
GTATGCTACTATGTTGGTGTTTACCATATTTTATAATTTTGAATATGAAA
TACCTGGCGCTGTTGGGTTTCGGATTTTGGTTTGAATTTTGGTTTTGTTT
GGTGTCTCCTCGTAGTTGTATGTAATGTGATCTAATTACGGTGATGACAC
CGATAACATGTTACCTTCTTCGGAGTTGTATGTCATGTAAGTGTGTTGTG
GTAGTGTATTGGTGTATTGGTGAAACCGATAACGTCATGTAAGTTTGGTG
TGATAGTGTATTATTGGTGTATTGGTGACACCGATAACGTAGTTGCCTTC
GTATCTAGTGTACGTAATAAGTATTAAGTGTGAATACACATATTATAGTA
GTATAGGTTCAGGTACATACACATGATGTAGAAATCCAACCCATACAGTT
ATTTCCTGTCCACCTCCGAAAGATGATATTCCAGTGCACACGATGATGGG
GCCTGCTTTCCCAAAATTATCCTGTGGAGAGTGAGACACCCCAGGGGAGC
CACTGCGTTGTAACTTATCTGAGGACCGATAGAATCCACGCGACCGATGT
ATCACACAGTGAGGTTGACGATTATCCCCTGGCCCGCGAACCAGTTTGGA
ACGTCACGGCTGATGTCTTTGTAAGTAAAAATAGTACTAGTACGAGTACT
CAGCTTGTAATGTAAGTATATTACTTGGTATCCTATACCACGTAGACGGG
TGGTGGATACATATCGGAGTAATGTTGGATGAATGAATATTAATAATAAA
CCTGTCTAGGATTGTCCCATACGCTTGACAGCGCAGAGTTCAACCATTGT
TCCTCGCTCCCTAATCTTCGCGGAAAAAAACACACAAATACGAGTAACAA
AAAAGGCTTTACATCTCATTGCAAATAGCGCCCTTCTTTTTGCCCGGAAC
GGCACAACAACTCGTAAGAGACCCAGAAACGCACCGCATGCGGCAATGTT
ACCGATACGACCAAAGCACCATCTGACCGCACAAAACCGCGGAGTGCGAG
CGTCACACTGCACCCAAATCAACGATTGATAGCTTGTGAGTAGACCCTTG
ATCAGGCGACGACGATGTAGTTGGTTTGAGATCAATACGTCCCGAATCGC
AGGAGCAACGATGTTCTTTGTGACGGCGTCGTGAAGCAAACAGTCACTTG
AGCGCGTTTTCGCTTGAAAAAATTACGGGACAAGTTCACGCTGATAAATG
TACCTCCGATACTGCATGGATTTTGCTCAAACGTGGTATGCCGGTTGCAG
CTAATCATGTGCTATCGTGCAATAGCTCGTATGTCTGCAACTTGTATCCA
TGAAGTGACTGCAACTTCAACAAAGAACAAACGACAAAAAAATCAAACGC
GAAGAGCATCACGAGGCCGTATTTTCCGTTTTTTTGTCGACGCACAACAA
GTGGCCGGTGCATCGCCGCTCGGGGCATTCCTTGCCGTTATCGTCTACGG
CCATGATGCAGCTCCCATCTAAGCCGCCCTCGTAAATCATACAGTATACC
GTGACCAGCTTTGTTTGCGAAACCCTGAAAACGACACGGAAATAACACGT
ACGGGTCAGACGAAACAATATGTGTTACAGTAGAATAAGGAAGGGCCAAG
AAGTGCGAACAAAATATTAGCACAAGTCCCCATATACGGCAAAGGTCGAT
TGAAAAAAAGCGGACGCAGGGCGAAGGACAATGTACGAAAATAAAAACAG
ATAGTACGGCGAATGTATTTTGGCAAGTAGTCCTCATCGTCACACACATA
CTTTTAATGAATCCAATATCTTAAATATTGCACGAAACAGACAAGGATAA
AAACAGAGACAGCTTCATACATAAACGGCTGACGGTTCGATGCAACACAA
ACAACGTACCTACAAAAATCATGCAGGCTCAAACGAAAAAAATAGATGTG
CGATGTGCGTACCCACTCCACAAGGACGACGCCTAAACGAAAAGGAGAAT
ACGATAAACCGCAAGGCATAATCGGCTTTTTTCGTAAAGAAGAAAAATAA
CAAAGATGCGGGTAAACAAAGCACATAACATACACGGCGATACAATGTTT
ACGGCAGATGTTGCATTTATACCTACCTCTGAAACGCAAAGAAACTATCA
CGGTGACCCCCAATACATAGCCCACAATAAGCCGAAACACCCACGTTGGC
GCCTGCATCTTAAGCATTGCCACCGCATTAATCCCGGATCCGATTCGTTT
AAACGACGCGGTTGATCACAGGCTTTCCATCGATGCTATACTTGTAATAT
TCAGATAATATTCAGATGACAATTGGGGGAAGGGTAAGGATAGGCCATCT
CCCGCCTTCACCCTTTTTCGGGCTTATTTATTAGGGGCCACCGTGATATC
TTATACTTGGAAGCACGTACAACAGCAAGGCCAGCAAGGCGTAATGGGAA
TGAGTGAGTATGATTTAAATTTAACAATATACTTTGTACCAAGAAATAGC
CTCAAACAATCGGCTCACCTAACTAGCGTGCTGAAATCCATGCCACGCGC
CACGTTTCGATAGCTTTTTCTCACAGTGCAAGCCGCTTCTTCGACTTTCG
ATCACCCACGACTTGTCCTTGCCAGATGATGTCGCCTCCTAAAGGTCATT
ATTACTGATTCCCGAATATCGAAGCCGTTCTCGATGGCGATGCTAGCGGT
GCCTACCCTGAAGCGATGGGATCCGCTTGCGAAAGTTGATGGGATGGATT
ATGAAGCAGTAGTGGTTATCGTGAATAATGAGGAATTGGAGGGGAGAACA
ACACGAAAACGCGATCTTGCCACGTGCGGCATAGTATTCGACGAGCTTGA
CGCTCACGACAACAGTAGTCGTAAAATGATCAAACCTCCACGGTACGTGT
AATGCTGGCCAATCACCAAATGAGAGTGATTAGACTGGCTCCACAAAACC
ACGAAATGTCGGCAGCTTATTGCGTTGCTTGCCCCGCACGCCAGACAATA
CATGCGGGATAATTTAGTCAAAAATAAAATATGAAAGAATTATGATTATT
TAATTAGACTATTTAGTTGATTGTTATTATTATTGTCCGCCCCCCCAAGC
GTTTTAACCTGATTAACTGTTTAGCCGCCCCTGTCGCGGATTAATTACTT
ACTCCTTACGAAACGTCACGAATTTCATTCCTCCTTACGAAGCGGCACAA
ATTCATGAAACGCCAAAAAATCAATTAATGCATAGTAATTCTAGACATGA
ATTATTTTCCACATCCGTAGGACACGATATTTTTAATTAATTCATACTAT
TTCAAGACATTAATTAATTTCCGCGTTCGTAGGAGACGAAAGTAGGAGAC
GAAATGCAGAATTGCTGCTTGCAATACTGCAATACCTGGTACATATGACA
CAGCTCTATTCCGCCCGACAGAAGTATCACACACCAACACAACACTTGTA
TTAATAGTACAGTACGAGTAGTACAACAACAGTAGTATCATATCATACGA
TCGTAGTATCATAGTGTACAGCACGAGTACTCGTAATCAATAAATAAGTT
GCGGTTATTATTCCCGCTGTCTCCCGAGCCCGAGCCAATTCGGAACGCCA
CGACGCCTGATGTGCTGATGTCCGAATTCGTAATTTAAAGTATGATTTCA
TATAGGCAGACAGGCTACTACTAACTGTACTGTCTACTCGTGGAGGACCT
GTGTCTAGATTATCTCGCCTGATAGTCGTAACTGTTGGACTGCTAGAGCT
CTGGACCTAAATATTATACGAGAACTGCTATTAATACTGACTGTTTACTA
CTGTATTATACCGTACTTGTACTTTTCATTGTTCGTCTGCTGGTTATGGA
CTCGTATGATATCTTTGGTGTTGGACTCGTGCTACGGTAGAGGGGGGCAT
ATTTTCGACCTGGATTTCAGCGGTTCAGGGTCACTCGGTCGAGTGATTCC
CCATGTCTTTACGGTTATCAACGTTTGCCTACGTTCCTTTCGCGATGTGA
GCCACCATGTGATTGATTGGTACGATGGGTGAACAAAATGTCTAAGTATG
CTTTATTGAGTGAGATACGGAGTCACTCGGGCGAGTGACCTCCGCCGGGA
AGTGAAAATATGCCCCTTGCCCGCCCCCCTACCGTAGCACGACTCGTTGG
CATTTTTTTTTTTTTTTTTTGTATCCTCGGGCAATGTGATCACAACGAAC
GGGATGTAAGGCGCGCGCTCGTGCGTTCGAACACTGCTCTGGAGTGAGCC
AGGTACCGACCAGCAACTCTTCAATCCCAAACAAGGCACATCGTCCGAGT
CTCGTCTTTTACCACATATCACGGTGCAACAAGCAATATTTGGCGCACTG
GATGAAAGAATGACGGAACGTCAGTACAGACAGGTTATCTCTTATGCCAC
ATCCATTACAGAAACTCACTATCCCTGTCAAGCCTACCACCTGCGTCCCA
TCTCAACTCTCACACATTTCAGGTGAAGACACACGACCAAAGCAGTTCTG
ATCATGAGGGTCCCGTCCGAACTTTTAATCTCTACCCAACGTAACACATG
CAAACTTATGCGAAACCGAGTACTGTATTTGGGACACGCACTGACTCACG
TTGCCTCTCTCTCTCGTCTCCGCCATAATATCTGCAGTGTAACGTACGAT
ATACTCTCAATCCAAGATGTAATGTGGGCAAATAGACACGTTTTATCCTC
CGGCCGACCCCTTGTAATTTCGTAAAAATGAGCGCCCCACACTGAGTGAG
TCTGCTGTGACAGATGCCGATTTATCGTTTAACCCTCCTGTTGAACGAGC
AATGTAACATTGCTGACGCTACGGCTGCGCGGACACGTCGGGCGCTGTTT
TGATCCCATTGGATTCATCACGTCATCGCCGCTTTCATAGTCGGCGACCA
TGAATTGTATCAGGGCGCAGGACGGCTGTGAGCAACACGGTGTCACCAGT
GTGCTAGTAGTCAGCGCTGACTAGTAGCACAGTTGCAGTGGCTGTGCAAT
GGTGGCTGGGTTTCTGCACAGCCTCAAGCGCGGATGATCTACGTTGTGGT
GGTGATTGTTATGTTGTTGTTGTTGTGCTGTCTCAAGGCTCAAGGGTGTC
TCTTGCGTATCGATGTCAGATCTTTTGCTTGTTTGTCGCGAGGCGACGAA
GACAACCAACGGTGAAGAGATCGACCTTGAGCTTGTCGCAGCCGGCCGTG
ATTGAGGCCTTTGTCGAAAAAGTGTTGCTGTAAATCGGGGCGGGCGCGAG
GCGCTTACTGGTTGTCAATCGTCGCTGCGTAGTACCACGAGAAAAAGCGA
TCCTTCTGTCTCCTGTGCCAGGGTTCAAACTATACTGCTGGAAGTTTGTC
AATCTGTTGTTTGATGGCTCTTTGCTCAAGATCCTTTGTATAAACTAATT
TCGAGCCACTTCCAAATTATTCTATGCGCACGGCGGAGTAACTTCATTTT
ATATGAGTACTAGCTGTACCGACGAAAACATGCGAAGCAACATATGTTAT
GCGCATATATGTTGGTAGCTCCTATTAATAGTTTTTCCGTCGCCGCGATG
ACGATAATTTTAATAGCAACACGAGTAGTAGCAGAGCCTACTGTAGTATC
AATACCATGTTTTTTGTTTTTCAGCCATTATCCTGCGGCGGATGGATGGG
TAACAATAAAGCCTGAGCTCCCAAACTTTCCGCTGTCGTGATCGCCGGTG
TAACTATAGTTGTTTGTAGAATACAATGGTTGATTGGCATTACAGCGCGG
GTACGTTGTTGGTCCTTCTGCTCCGATAGGAGTATCAGCTACTGGAGGTG
GCCAGTAGCCATCGGAAGAGGCAACGTGTGAAGTTACCTCCGGTAGTGTG
GGACTTTGCGCAAGCAAGCTCACCCGCCAGTGTCGCCTTGCCCGTTGGAG
TCGGCCCAGTTATGGTCCACCCTACCCGTTCGGGCGTGACTAGTATCTCG
GTGGCCCCTAATAAATAGCCCACAATAAGCCCCAACACCCACGTTGGCGC
CTGCATCTTAAGAACTGCCACTGCGTTAATCCCGGATCCGATTCGTTTAA
ACAACGTCGTTGGTCACAGGCTTTCCATCGACGCTACACTTATAATATGC
AGGTAGTAAATGGGGGAAGGGTAAGGTTAGACCTTCCCCCGCCTTCACCC
CTTTTCGGGCCTATTTATTAGCGGCCACCGTGATAGTACTGTACTGTACT
GTACGCCGCAGCAATTAAGAAATTCTTGTTTTGGGCGAGGATCTCGCGGC
TTATATTCTCCCCGATTTGAGCAAAATTGTCTATTATACGTATGTCGAAT
TTCTAGGCTTGTTAATCGGAGCCGATTAATCCGATTAAGTTGGACCGATT
ATGTCGACATCGGAATCGGAATATCGAACCGATTGTTTGCCAATTTATTG
ATCACGTATATTTACCGGCTATATTAGCCCATATCGTCTTTGGCCGGCCA
TGAACCTCCCAGCTTGCTGCTGGCCGGGGGTGCACAACACACACATACGC
ACGCGCTGCAGGCCAAATAGAACACGAACCATAATGAGCCTTGCAGGCTC
CATATATCCACCACGAAGTTCGACCACCGCACAAGACGATCCCTCACTTT
CAGAGAGAGAGGGCACCGCCGTGCCTGCCCCCTGCTGCTTTTGCTATAAG
CTTCGAACGCAGCCAAAGTCGACCGCGCGTGTTGAACATGCAAAAGAGAT
GGTAAGCCGCAGTTTCGCCGTGGCCCACACGTCGATTTACTCGAACTAAA
CAATATACGCACAAACACGAGCTTTTCGCAACTACGAATTTTACCCTTAC
TGTGAAGGGACATGGAGCCAAAAAGGCCCATTTTTTTCTTTTTTTTCTAC
CTCCGGCGGCGCCTCCAGTGGGGCCGCTAGTGGGGAGGACCCGATTGCGG
CTCGCTTCGCTCACCGACATATCATGAAAAAAATGATTTATCGACTGCGC
CGAATTCCGATTAAAAGTTGAGTCGTCGCTTCGCTCCGATTCACAGCCCC
TCCCAATTTCTAATTGTGCGCAGGTAGGCAGCACGCGATTTTTTTTTATG
AATCAAATTTTTATTCCGTAAAATATGACACTTGTTTTTCTTTTTTGCCC
CCCCCGTCACTTTTGCTTTCCAGTCCAACTTTTCTTCTCATCGCGCACAG
CTCGGTCGGTTCTTGTAGGAATAAAATTATCATCTTCAAAAAAATGGCAA
TGCCGCATTTTCGTTTTTCTTTTTAAATTTAGTTGTCTTGGCGTTTATTA
ATAGTCCTGGCGTTTAGTTATAGAGCGTAGCGTAAACGGAAACAAGTACT
AAAACTGTATTTCTGTCTTTGTAAGTATAAATAATAATGGTCCTGTTTTC
GACTTCCCTCCGCGATATTAGTCCTGTTTCTGCTATTGTACGTTCGTCCG
TGACATTGGTCCTGTTTGCTGAATCCCTCGGTTCGTCCGTGGTAGGTGAA
AATTGTGGCAACTGCGGCGAGTGTACACTTCCTCGACCGAAGCGTTTCCT
ACAACCTCGATGCCCACGCGAAATTCAAAGCTCTCGACCCCCCTATCGAG
GTACTGCAAGACAAGGATGAATTCGGGGCGTGGCAAGGTGTTGGCGACCC
TGTCTTACACATAGAGGTAACATGAGGCGTGGAGGGGGGGGGGGGTAGTG
CTTTTGATGTGGTCGCCTTGCAACCTCTTGTAGTTAACTATGGTTGGCAT
CTTTGTGAGTGTTGATTGTTTCTGTGTGCCTAGCCGACCCATCCCGACCC
TAGCGCCATCCCTGACTCTTGTCGTAACCCCAATCTCCAACCATTTACCT
ACGGTACTGTTGGTGGGACCTAAATCCGCACCTTCGGCGCCGAAAATCGA
CTAAAACGTGGTTTTTGACTCTTGTGACCCTTGCAGCTAGACTGCGAGGT
TGGAAAGTTCCCTGAAAATTTTCTATACGGTGTATATGATCAACCATAGT
TTACTATCGTTATGAAGTTGTAAAACCCTTTCTTATTTTTGGTTGTGAGA
TAATCTTGCTCCATGCAATGCACAACCCCCCAGTCGTGATCGTGGTTGGC
CTCAATCCTAACACGGCACGGTAGAGGGAGCTATGAAGCCTGACGTTTTG
AAGGTCAACGTCCGTCTGTCACGTATTTCACTGGCTGTTGGCTGGTGCTG
CTGGCATCTTTGACTGTTTTATTTTGCACCCGTCATTTTAACTGGCCAGT
CCAGCTCATAGAAGCTCATTGGTCAGCGCGCCTGTCTGAGCAATCCGAGG
TCACGGGTAGGTGTCGTCCCTTGTCTCCCCCACCCGGTGCTTGCGTTGTT
TCTTTATCGGGCACAGGGCTCGTTTGGCATTCCCATATGTAGCTCATGGA
CTTTGTTCACCGAATTGTGCGTAAGTCACGCTTTCTCGTGTGTTTGTTGC
TTGTTCGGCCGTGTTCGGACCACTGAGTCCGTGTCCAACGACGAAAGGCG
CAATGACCTTGTTTGTCTCAAATATAGCAACCGTCGGAGATCGTTATTGC
TGTTTCGCCTCTAGGCGGCTTTGCGCGTGTTGACACTCTCTCCTCTCGTT
TTGACAAAATACGTCGAAGGAATCATTATTGGCTTTTCTCGGCGTGAGCA
CTCGAAAAGCAAGGATTTCCGTTTCTCGCGCAAGAAGGCCGGAAGATATC
TGCTGTATGATACGCGATTTTGTTTTTTACGTCCGTACGCTAATTCATGT
CCTCTGGTTTTTTGTACTCGAGGTGCCATTTTCTGAGCACGCCCGTTTCG
TCTTTTTTTCGGCACAGCTACGCAACTGGGCGGACGTCGCGCTGTTAGCA
CCGTTGTCCGCCAACACCATGGCAAAGGTCGCCAACGGCATGTGCGACAA
CCTTGTGGTGAGAACATATCGCAGAGTATGTACATAGAGCTAGGCATCGT
GTGGCTTCTGTGTGCTGTGTTCGGCGTTCTTAGCCCTTTGTCACTTGAAT
GAACATCACAAGGGGCTCGGAGGGATGCAACTTGTCTCTTTCACGAACGA
GTGCGTTTTTCGGTGGTGACCATGGGATACGGAAGGTGTATTGGTAGGTA
GACAAGAAACAACCACGCAGACATGTGTATAGCTTGGCAACAGTTGTTTG
TTTTGAGGACTACCCTGGACATGATACACGGCTTAGCCTTCTACCCCCGG
TAGCTCAGTCGAATAAAATTCCTGACACTTGGTGTTAACGGCGTGATACA
TCTTCCATGCCGCGTGCAAGGCGCTGGAAGGGACATCGGCGAGTTGCAAG
AAGGACCTGACAGACCCGACGTCGAGTAGCGTAACGTACATTAATATGAG
TCCATGATTTTGTGCTGCAATCCGACGGCACTCGAGTTTGGTACTTGTAC
TGACTGTACTATCGCGGTCTTTTTCAAAGGAGGTTTTTTGCTATTTTCTC
GCCAACCCAAAATAGCTGCGGATGCCCATGGGTTGCAACCGTAGTTGTAC
TAGATTTAGTAGGCGTGGGCGGGGCTATTAGTGGGTAGACAAGATACGGT
CGTGCCAGGTGACCTTGGGAGATGGCAGGTTTGTTAGACTAGAGACACTC
GCGCAACATGGGCGGCGGACTCATGTCCCTCGCTCTGCCCCCCCGCCCAC
CCACCCGCCCGCCCGCCGTCCTGGCATGGCCTTGCAGACTTGTGTGGCCC
GCACGTGGGACTTCGCGAGCAAGAAGCCGTTCGTCGCAGCCCCGGCGATG
AACACGTGCATGTGGGATCACCCCATGACCAGCCGGCAAGTAGTATTACG
CAGAAAGATCAAAGAGAGATTGGACGGGTTGCCACGTCGACCCGTGTGGT
AGCGTCTGCGGTAAGATCCATTGCTGTTCGTACAAAAAATTGCACGCCTC
GGACGGAGGAAAGGACAACGAACGGAACGAGCAGCTGTTTCGTAATGTAG
CGGCTATTGTTCAAACTGTGCTCACCGTTGCTCCTGAGTGGAACGGACGA
CCTTCGTCAATTGTTCGCTATCATATTTGGTTGAACGGACAAACCTTTAC
GACTCGTTCACGTTTTGCTTGTCCTTCGCCGAAAGTCGTTCGAAGGACAA
TAATTTCAAAACAAACAATCGCCGTATACATACGAGAAGGTCACGTGCTA
GGGTGGACACAAACCATACATTTCCGTGAGTTTTTGACAGCTTGGAAAAA
CATAAATTGGATTTTGTCACTGGTGAACAATTCCGTTCCACATAAATGTC
ACAATTTCTTTAGCGGCGCTTCTAACGGACAAAAAAAGGCCCATGATCGT
GATTTTGAAGCGAACTGCAAACATTTAAAAACAAAATCGCGATTGGTGAC
CTTCAAACAGGACTTTTGGAAAAAAGGGTTTCCAATAGTCGCGAAACCGG
ACTTTTCGTCACGATTGTGGACTATTTTTTGCACGTTAGAAACGCCCCTT
AGGAAGGTTAAATATCCCGTTCGACATCAAAATGACTTCTTCTTTGAAGG
GTAAACATTCCCGTTCAACAGAAAATAGCGTGTTTCAATAACAGGCGAAG
GACGGGTCATCCTGTCCTTCGTCCGAGGTGCGAGAGGTTGTCTTCGTAGC
TGTTTTCGTGGGCATTATAGTAGCGTAGAGCGTGTGAACGACAACGACCC
GCTGCTCCTGTATATTAAGTGTTCGAAGATATGTTTCGGGAGGGTGTTAC
TCCCTACCTGGTATGTATGACGAAGTTACTCCCTTGGGTCGTCCCAGGTG
TTTTAGGGGGTGGTGTGGATTGGGTTACGGTTTAGTTCTGTGATAGCAGT
TTGCCTACCTCCCTGCGTGCTCCACGTTTGCACTGTTTAGTAACATAAAC
GATACCCCTAATACCCGTTCTGTCCTTCGGCAATCCGACCTCGTAAAGCG
GGCCTATCTTAGTCGAACGAGGGCGGGGGGGGGGGCATCGGCGTGTCCCC
TGCTTGTAAAATCCGTGTTCACGATTCACCCATCGGCGCTCTGCCTCGCC
ATCGCTTTGTTGAGAGTTGCATGCTTTTGATTTTGTTGGAAGCGCACGCC
TATTTTGGGACGCAAAAGATGGGTACAAGCAACAGCAAGCTACAGAATGT
ATCGCGTGCTGTTGTACGTTGATTTTGCCTCTCCCCGCAATATCCTCCGT
CGCCTCAAAAACCTTGGTGCCCTTGTTTATCGCGCGTTCCCTTCTGACGC
TGTGTTGTTCCAACCGCGATGCAGGCATGTATCGATGATGAAAGAGCTCG
GGATTGTGGTCATACCGCCTGCGACGAAGGTCTTGGCTTGCGGAGACCGA
GGTGAACACGACGCGTGACGTATGGGATGTGAAAAATGAAGGGGCGTAGC
TTAAGACATTCCATCCGCATATTCGTCCGCAAGGCATGGTGATGCGGCAA
TCATTCGAGCGTTGCACGTACGTTCGCTGCGTTGGTAGAGTTAGATGCTC
TGGAGCGGTGTATGGTTTATGTCGTGGCCGCTACCACCAAGGCTACTATC
ATGTCGAGTGTATCGTATGCACGATTTTTCTTGGTAAGGTAAGAGCGGAG
TGCCGCGACGGGCATGATGGTCATACGCCGAGATAAGATTTTTTCTTGCT
GTGGTACGAAACGGCGAGATGGCGTACAACAACGACCCTGGGCAACTGGT
CGCTGTTGTCGTGACAGCGGTTCGACCTCGATATTTGTGTTGCACGGCCG
AGGTCGCGCGCAGCTTATTAGAAATTCACGTAATCATTGAGCTGGTCAGT
CGGCGTTGGCTGAATATCTTAGTGTTTATGGTGTTACTCTAATAAAAGCA
CAATCTGAGGTCCACGCTTAACAGCCAGACGGACTCCCGATTGTGCTTTT
GCTATAAAAACTAAATACACGTCCACTGAGCTATTGAGTCAGCGCTGACT
GAATAGCTCAGTGGTTATGGTGTTACTCATGTAGGGACAACGGCCTCGCT
CGTGTGCAAGTATGTGAGGTGGTTTGGCCAGCGTCGACATATTCTACGTA
TGTTTTGGCCAACGACGTATATGGTAAATGAAGTGAATGCACGTTGGTTG
GTGGGCCTCGCTCGTGTGCAAGTATGTGAGGTGGTTTGGCCAGCGTCGAC
ATATCCTACGTATGTTTTGGCCAACGACGTATATGGTAAAAGAAGCGAAT
GCACGTTGGTTGGTCTTACATATGTACTTCGTTCGTCCCTCTGCCTCGCT
CTCTTTCACGCACATGTTGTATGCACCACGGTGGTAAGGCAACGGAGCAC
TCGCCCCGGTGGAGTCCATCTGCGAGGCTGTAAAGGAGATTTTGAGTGCT
TCTCAAGCTTGAAATTGCGACAAAAATCGATGATGTCAGCGAGTGGCGTA
TTTGTCCAGGGTGGGCACTGTTGGGTAAGAGTAACACCTGTCTGTTCCGT
GGCAGTACTTGTGTCGTGTTGCGGCGCTGCGATTTTTGACTTGGTCGGTG
CTTGAGGTCGCGCGAACGACTCGCCTCTCGCGGCGTCCTACCACGAACCA
GGTCACTTGTCACCGCCTGTCGAGCTTTGTAAGACGCCTATGGCGCGCGT
GCAAAGGAGAGAATATGGACCACTTTGGCGACCCTGCTTTTGTTTGTGCC
GACCGCGTTGTGTTTGATGGATTTGTGTGCTGCGTGTGTTACCGTGCTGC
TGCTCTCTTGTGAGTATGCATATTTTTCTGGCCGTTGCCTCTGCTGCCCA
TGTCGAGTTAGGTTTGCCCTGGGCTCCGTTGGTCTGCCTTGCTGCTTCTT
GGCTTGCCGTTGCTGGTCTGGGTGTATCTGCTACCTGCGTGTTGCCCCCA
GGTCGTGCGCGTGTTCCCCACCCCATGGGGTGCATTGCGTGGGTTTCTGG
TAGTTGTAATTTCGTTTTGTACAAACCGCGCTACTTGATTGTCAGTAGCA
TCACGCTATTGTAGTGTAGCAAATGGTATAGTAGCAGTAGCAAACACGAA
TATTTTCGGCCATGATCATGGCATAGTTTGTAGTAGTTCTGGGTGCCGGC
AACTACATTACCGCGCTATGCGCTGGCCCCACCTCTGACGTGATCTGCTG
CGTTTTTCTGAATGTGGCGGCTGCCTCGACAAGCGATGCCGTGCGCTTCT
GCTTGCTATTCCACCGTAGCTCTATCCCGTTCCACGCTCTCCACTCTTGT
ACTGTTTCCATTTTTTTTTGCCGTATACGACACGTACGTGCAGGTTTTTT
TTTTACCGAGGTTGTGCTTGTTTGGTTTGGTTCCGAATACTTTCGACCTT
GCAGTCGAGGCAGCCCTCTTGTGATTAGAGTTTTCAGTTATTCAATCAAC
CACTCATCAAACCACCAACCGGTCATTCGACGGGTTTCTTCTCTGGGCGT
TGAATAACGCCCCCATGTCCGCGTCGCGTACCGGACACCAACCAAGCAAT
GGTAATGGGGTATGCTAAATCACATGTTCACACTATGAGCTGTTCAGAGG
CTATAGTAGGAATCGTTCGAAATAGTCCAGAACCGAGGAGGTTCTGAGGT
ACTTCGTATAACGACACACTCCGTTTCCCTGATTTTTTTTTTCCTGACAT
GAGTTGCGCCAAACAATAGCATTTTTTTGGGAATACTGTG back to topCoding sequence (CDS) from alignment at D-herbacea_F_contig1:2904570..2924059+ >mRNA_D-herbacea_F_contig1.117.1 ID=mRNA_D-herbacea_F_contig1.117.1|Name=mRNA_D-herbacea_F_contig1.117.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1266bp|location=Sequence derived from alignment at D-herbacea_F_contig1:2904570..2924059+ (Desmarestia herbacea DmunF female) ATGGATGACAAAGGAGAGGGCGCTCAAGTCGGCACGAAGCCGAAGGTTTT GCTGTGCCTGAGTGGAAGCGTTGCCGTGATCAAAGTTCCCCAGCTGGTCG TCATGCTCGCGGAGTTTGCAGAGATGGATGACAAAGGAGAGGGCGCTCAA GTCGGCACGAAGCCGAAGGTTTTGCTGTGCCTGAGTGGAAGCGTTGCCGT GATCAAAGTTCCCCAGCTGGTCGTCATGCTCGCGGAGTTTGCAGAGGTGA AAATTGTGGCAACTGCGGCGAGTGTACACTTCCTCGACCGAAGCGTTTCC TACAACCTCGATGCCCACGCGAAATTCAAAGCTCTCGACCCCCCTATCGA GGTACTGCAAGACAAGGATGAATTCGGGGCGTGGCAAGGTGTTGGCGACC CTGTCTTACACATAGAGGTGAAAATTGTGGCAACTGCGGCGAGTGTACAC TTCCTCGACCGAAGCGTTTCCTACAACCTCGATGCCCACGCGAAATTCAA AGCTCTCGACCCCCCTATCGAGGTACTGCAAGACAAGGATGAATTCGGGG CGTGGCAAGGTGTTGGCGACCCTGTCTTACACATAGAGCTACGCAACTGG GCGGACGTCGCGCTGTTAGCACCGTTGTCCGCCAACACCATGGCAAAGGT CGCCAACGGCATGTGCGACAACCTTGTGCTACGCAACTGGGCGGACGTCG CGCTGTTAGCACCGTTGTCCGCCAACACCATGGCAAAGGTCGCCAACGGC ATGTGCGACAACCTTGTGACTTGTGTGGCCCGCACGTGGGACTTCGCGAG CAAGAAGCCGTTCGTCGCAGCCCCGGCGATGAACACGTGCATGTGGGATC ACCCCATGACCAGCCGACTTGTGTGGCCCGCACGTGGGACTTCGCGAGCA AGAAGCCGTTCGTCGCAGCCCCGGCGATGAACACGTGCATGTGGGATCAC CCCATGACCAGCCGGCATGTATCGATGATGAAAGAGCTCGGGATTGTGGT CATACCGCCTGCGACGAAGGTCTTGGCTTGCGGAGACCGAGGCATGTATC GATGATGAAAGAGCTCGGGATTGTGGTCATACCGCCTGCGACGAAGGTCT TGGCTTGCGGAGACCGAGGCAACGGAGCACTCGCCCCGGTGGAGTCCATC TGCGAGGCTGTAAAGGAGATTTTGAGTGCTTCTCAAGCTTGAGCAACGGA GCACTCGCCCCGGTGGAGTCCATCTGCGAGGCTGTAAAGGAGATTTTGAG TGCTTCTCAAGCTTGA back to top
|