mRNA_D-herbacea_F_contig1.110.1 (mRNA) Desmarestia herbacea DmunF female
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Overview
Homology
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: D7FUA8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA8_ECTSI) HSP 1 Score: 356 bits (914), Expect = 4.320e-114 Identity = 169/210 (80.48%), Postives = 184/210 (87.62%), Query Frame = 2
Query: 2 ECALCKESYQAEIASNPWWSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDGYGSDSCSESDDD---DDCCKEGIAAFDTDVVAGDAQVGCPEGRLSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTPIDLPGPLRDLRELNLAQAR 622
EC+LCKESY +EIASNPWWSLF ECPRCHRMQIPRVDA+SAAVSVDYIHAVCAEEGEGCDSDGYGS+SCS+SDDD D +EGIAAFDTD++AGD+Q GC EGRLSTFQASRLLVLM+HARTCPG HANP+HAEVCRSTKFL NGDPCEHRWCRPCKSLLSHLV+CP PNTCRICTP+DLPGPLR LR+LN+AQAR
Sbjct: 469 ECSLCKESYPSEIASNPWWSLFLHECPRCHRMQIPRVDATSAAVSVDYIHAVCAEEGEGCDSDGYGSESCSDSDDDVTDDGREREGIAAFDTDIIAGDSQAGCKEGRLSTFQASRLLVLMSHARTCPGHHANPKHAEVCRSTKFLXXXXXXXXXXXXNGDPCEHRWCRPCKSLLSHLVRCPDPNTCRICTPLDLPGPLRQLRDLNVAQAR 678
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: A0A6H5KVY2_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY2_9PHAE) HSP 1 Score: 356 bits (914), Expect = 4.530e-112 Identity = 167/210 (79.52%), Postives = 185/210 (88.10%), Query Frame = 2
Query: 2 ECALCKESYQAEIASNPWWSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDGYGSDSCSESDDD---DDCCKEGIAAFDTDVVAGDAQVGCPEGRLSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTPIDLPGPLRDLRELNLAQAR 622
EC+LCKESY +EIASNPWWSLF ECPRCHRMQIPRVDA+SAAVSVDYIHAVCAEEGEGCDSDG DD +EGIAAFDTD++AGD+Q GC EGRLSTFQASRLLVLM+HARTCPGRHANP+HAEVC+STKFLMLH+RDCTGH+ +GDPCEHRWCRPCKSLLSHL++CP PNTCRICTP+DLPGPLR LR+LN+AQAR
Sbjct: 684 ECSLCKESYSSEIASNPWWSLFLHECPRCHRMQIPRVDAASAAVSVDYIHAVCAEEGEGCDSDGXXXXXXXXXXXXXXXDDREREGIAAFDTDIIAGDSQAGCKEGRLSTFQASRLLVLMSHARTCPGRHANPKHAEVCQSTKFLMLHMRDCTGHTASGDPCEHRWCRPCKSLLSHLIRCPDPNTCRICTPLDLPGPLRQLRDLNVAQAR 893
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: A0A7S1TU47_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU47_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.150e-52 Identity = 90/210 (42.86%), Postives = 129/210 (61.43%), Query Frame = 2
Query: 2 ECALCKESYQAEIASNPWWSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDGYGSDSCSESDDDDDCCKEGIAAFDTDVVAGDAQVGCPEGRLSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTPIDLPGPLRDLRELNLAQARVSA 631
+CA+C E+Y NPWW+L +EC C + Q+PR+D S +DY+ A+ A ++ + E D+D + DT+ D E +S ++S+LL+L+ HARTCPG+H + +HAEVC+S K+LMLHIRDC+G P+G PC WCRPCK+LLSHLV+C PNTC IC P +LP L++L+ LN + +V+A
Sbjct: 37 QCAVCNEAYTVTFNYNPWWALRLEECMHCKKRQVPRLDISHPTNQIDYLPALSAV------AEAMQLNQAQEDKDND-------ISTDTESDMND------EFNMSPEKSSKLLILICHARTCPGKHRSRRHAEVCKSIKYLMLHIRDCSGRLPDGQPCPFEWCRPCKNLLSHLVKCFDPNTCAICNPWNLPRSLQELKTLNQLREQVTA 227
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: A0A7R9YGR4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGR4_9STRA) HSP 1 Score: 179 bits (453), Expect = 5.520e-49 Identity = 92/212 (43.40%), Postives = 126/212 (59.43%), Query Frame = 2
Query: 2 ECALCKESYQAEIASNPWWSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDGYGSDSCSESDDDDDCCKEGIAAFDTDVVAGDAQVGCPEGRLSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTPIDLPGPLRDLRELNLAQARVSATT 637
+CA C E Y NPWW+L +ECP C++ Q+PR+D S +DY A+ A + S S+++D K+ DT+ D E LS ++S+LL+L+ HARTCPG+H + +HAEVC+S K+LMLHIRDC+G P+G C WCRPCK LLSHLV+C PNTC IC P +LP + L LN + +V+A+T
Sbjct: 277 QCAECNEPYSVTFNYNPWWALRLEECPHCNKRQVPRLDISHPTNQIDYHPALSAV---------AEAMSLSQANDG----KDNEINTDTESDLND------EFSLSPDKSSKLLILICHARTCPGKHRSKRHAEVCKSIKYLMLHIRDCSGRLPDGQSCPFEWCRPCKKLLSHLVKCFEPNTCAICNPFNLPRSMEQLMTLNRLREQVTAST 469
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: W7U3G5_9STRA (TAZ-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3G5_9STRA) HSP 1 Score: 165 bits (418), Expect = 9.740e-43 Identity = 85/207 (41.06%), Postives = 113/207 (54.59%), Query Frame = 2
Query: 2 ECALCKESYQAEIASNPWWSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDGYGSDSCSESDDDDDCCKEGIAAFDTDVVAGD---------------AQVGCPEGR----LSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTP 565
+C +C ESY A + NPWW+L +QECP+C ++QIPR+D + A ++DY A+ AEEG DD EG+ + +V G+ +G PE S QAS++L LM+HARTCPG H + H VC STK+LMLH+RDC G + +G+ C WCRPCK LL HLV+C C IC P
Sbjct: 444 QCGVCAESYSAAASLNPWWALEKQECPQCKKLQIPRIDINLPANTMDYHPALLAEEG------------------DDXXXXEGLGLGGSGLVPGEEFRGMGKGGEDSAVGGGIGVPEEEDGQAFSPAQASQILELMSHARTCPGHHHSEAHRAVCTSTKYLMLHVRDCDGKTLDGEACGFSWCRPCKHLLGHLVRCYESEQCSICRP 632
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: A0A7S2KXT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXT5_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.420e-42 Identity = 92/217 (42.40%), Postives = 125/217 (57.60%), Query Frame = 2
Query: 5 CALCKESYQAEIASNPWWSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDG---YGSDSCSESDDDDDCCKEGIAAFDTDVVAGDAQVGCPEGR------LSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTPIDLPGPLRDLRELNLAQARVS 628
CALC E+Y+AE +NPWW+L ++ C +C + QIPR+D S+ A +++Y A+ A EG D D S S S D G +D+ + D+ G G+ L + A++LLVLMAHA CPGRH N +H +VC S K+LMLH+RDC G +GD C WCR K LL HL+ C PN CRIC P LP L + +LN Q +++
Sbjct: 539 CALCNETYRAECTANPWWALTQEPCLKCGKAQIPRIDISAPANTIEYHPALLAHADEGNDGDSDARNNSSSVSGGGMHMDVGNRG--GYDSGSDSEDSDPGEDFGKVYAGPKLESADAAQLLVLMAHASICPGRHKNERHRQVCLSVKYLMLHVRDCPGTISSGDLCPFPWCRKVKHLLYHLISCSKPNECRICRPRSLPKKLIKMAKLNFLQPQLA 753
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: D8LKM8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM8_ECTSI) HSP 1 Score: 157 bits (396), Expect = 3.410e-40 Identity = 83/187 (44.39%), Postives = 102/187 (54.55%), Query Frame = 2
Query: 2 ECALCKESYQAEIASNPWWSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDGYGSDSCSESDDDDDCCKEGIAAFDTDVVAGDAQVGCPEG---RLSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCR 553
+C C SY A ++ NPWW L RQECP CH+MQIPRVD + +V+ A E D DG D E+ D++ G L + QA++LLVLM HAR CPG H + + AEVCRS KFLMLH+RDC G + NGDPC WC PC SLL HL+QCP C+
Sbjct: 334 QCGACAASYAATVSGNPWWLLVRQECPICHKMQIPRVDILNPTNNVESHIAFLTENAS--DGDGSCMDWDGETSDENSXXXXXXXXXXXXXXXXXXXXXXGSGLGPTLDSDQAAKLLVLMCHARHCPGNHRSARLAEVCRSVKFLMLHLRDCDGKTRNGDPCPMPWCEPCMSLLHHLIQCPESTGCK 518
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: A0A6H5KT72_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT72_9PHAE) HSP 1 Score: 155 bits (393), Expect = 3.890e-39 Identity = 86/194 (44.33%), Postives = 107/194 (55.15%), Query Frame = 2
Query: 56 WSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDGYGSDSCSESDDDDDCCKEGIAAFDTDVVAGDAQVGCPEGR---LSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTPIDLPGPLRDLRELNLAQARVS 628
W L RQECP CH+MQIPRVD + +V+ A E D DG D E+ DD+ G L + QA++LLVLM HAR CPG H + + AEVCRS KFLMLH+RDC G + NGDPC WC PC SLL HL+QCP C++C P LP PL+ LR LN + + ++
Sbjct: 477 WLLVRQECPTCHKMQIPRVDILNPTNNVESHIAFLTENAS--DGDGSCMDWDGETSDDNSXXXXXXXXXXXXXXXXXXXXXXGSGLGTILDSDQAAKLLVLMCHARHCPGNHRSARLAEVCRSVKFLMLHLRDCDGKTRNGDPCPMPWCEPCTSLLHHLIQCPESTGCKVCDPEHLPPPLQQLRALNRSSSTLA 668
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: A0A7S2C9V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9V7_9STRA) HSP 1 Score: 137 bits (346), Expect = 6.480e-37 Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = 2
Query: 308 GRLSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTPIDLPGPLRDLRELN 607
G+++ QAS+LLVL+ HARTCPG H + +H+EVC+S K+LMLHIRDC G + +G C WC+PCK+LL+HLV+C P++C IC+P DLP LR LR+LN
Sbjct: 21 GKMTHRQASKLLVLITHARTCPGHHMSHRHSEVCKSVKYLMLHIRDCCGKTSDGTECSFPWCKPCKALLAHLVRCNKPDSCDICSPYDLPPALRKLRQLN 120
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Match: A0A6U3TJG2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3TJG2_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.070e-34 Identity = 92/256 (35.94%), Postives = 116/256 (45.31%), Query Frame = 2
Query: 5 CALCKESYQAEIASNPWWSLFRQECPRCHRMQIPRVDASSAAVSVDYIHAVCAEEGEGCD------------------------------------------------SDGYGSDSCSESDDDDDCCKEGIAAFDTDVVAGDAQVGCPE-------GRLSTFQASRLLVLMAHARTCPGRHANPQHAEVCRSTKFLMLHIRDCTGHSPNGDPCEHRWCRPCKSLLSHLVQCPTPNTCRICTPIDLPGPLRDLRELN 607
C++C E Y + NPWW L ECP+C ++QIPR+D S+ A +++Y A+ A +G SDG G + + D+ +E I D D V + ++ E LS QA RLLVL+ HA TCPGRH P+H VC STK+LMLH+RDCTG NGD C WCR K LL HLV C C IC P LP L L LN
Sbjct: 628 CSMCNEGYPSNSDVNPWWVLTSHECPKCGKVQIPRLDISAPANAIEYHPALLAHMDDGNSKMSAVDTSDHHHAPASGLLPYQHGSYLPRPAPPILRSFSDSDVSHTDVSDGEGGNGKYDESSDE---EEEIDLDDADSVTREEKIEKEEFGFEYKGEELSDDQARRLLVLIEHASTCPGRHQCPKHRNVCHSTKYLMLHVRDCTGLLSNGDVCPFPWCRKVKHLLYHLVSCEKGKECSICCPEKLPSNLVALTGLN 880 The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-herbacea_F_contig1.110.1 >prot_D-herbacea_F_contig1.110.1 ID=prot_D-herbacea_F_contig1.110.1|Name=mRNA_D-herbacea_F_contig1.110.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=227bp MQIPRVDASSAAVSVDYIHAVCAEEGEGCDSDGYGSDSCSESDDDDDCCKback to top mRNA from alignment at D-herbacea_F_contig1:2810772..2812406- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-herbacea_F_contig1.110.1 ID=mRNA_D-herbacea_F_contig1.110.1|Name=mRNA_D-herbacea_F_contig1.110.1|organism=Desmarestia herbacea DmunF female|type=mRNA|length=1635bp|location=Sequence derived from alignment at D-herbacea_F_contig1:2810772..2812406- (Desmarestia herbacea DmunF female)back to top Coding sequence (CDS) from alignment at D-herbacea_F_contig1:2810772..2812406- >mRNA_D-herbacea_F_contig1.110.1 ID=mRNA_D-herbacea_F_contig1.110.1|Name=mRNA_D-herbacea_F_contig1.110.1|organism=Desmarestia herbacea DmunF female|type=CDS|length=1362bp|location=Sequence derived from alignment at D-herbacea_F_contig1:2810772..2812406- (Desmarestia herbacea DmunF female)back to top |