mRNA_D-dudresnayi_contig10422.458.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI) HSP 1 Score: 454 bits (1169), Expect = 8.120e-154 Identity = 215/237 (90.72%), Postives = 225/237 (94.94%), Query Frame = 1 Query: 7 RFDELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGVARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENPRFGNYAGGLLDDGGFLWPREGRGDDSAHPPIHPTKSVDPASLQPDEKKIYELVTKHFLACCSKDAVGHQTKV 717 RFDELQ+GVISYGPCQFPTLGF+V+RYKRIQAFQ EAFWSIKMEYAE+DP SPGG ARADF+W RGRLYDHACC +LYEMTVEDGVAVVTSVEARRVTK RP+PMSTVELQKRASRFCHI SERTM VAEALYQRG+ISYPRTETEKFKREFDINTLL DFR+NPRFGNY GGLLD+GGFLWPREGRGDDSAHPPIHPTKSVDP SLQ DEKKIYELVTKHFLACCSKDAVGHQTKV Sbjct: 4 RFDELQEGVISYGPCQFPTLGFIVDRYKRIQAFQSEAFWSIKMEYAEDDPRSPGGKARADFSWQRGRLYDHACCAILYEMTVEDGVAVVTSVEARRVTKARPIPMSTVELQKRASRFCHISSERTMHVAEALYQRGIISYPRTETEKFKREFDINTLLGDFRDNPRFGNYVGGLLDNGGFLWPREGRGDDSAHPPIHPTKSVDPNSLQADEKKIYELVTKHFLACCSKDAVGHQTKV 240
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA) HSP 1 Score: 292 bits (748), Expect = 1.060e-90 Identity = 150/260 (57.69%), Postives = 174/260 (66.92%), Query Frame = 1 Query: 7 RFDELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGV-----------------------ARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENPRFGNYAGGLLDDGGFLWPREGRGDDSAHPPIHPTKSVDPASLQPDEKKIYELVTKHFLACCSKDAVGHQTKV 717 RFD L +ISYGPCQFPTLGF+VERY+RIQAFQ EAFWSI MEY + + GG RA F W RGRL+D L E+ + G AVVT+V AR T+ RP+PMSTVELQ+RASRF IPSER MA AEALYQRGV+SYPRTET+ F RE D+ L+ +FR N G YA LLD G F WPREG +D+AHPPIHPT SVDPA+L DE+ +YELV +HFLA CS+DA G QT V Sbjct: 1 RFDGLDQSIISYGPCQFPTLGFIVERYRRIQAFQREAFWSIAMEYCAD---AAGGARLPAPXXXXXXXXXXXXXXXXQATRASFMWERGRLFDRGVAAALAELCADAGTAVVTAVSARPQTRRRPLPMSTVELQRRASRFLRIPSERAMAAAEALYQRGVLSYPRTETDAFSRETDLAGLVGEFRGNAALGAYAAALLDGGAFEWPREGTNNDNAHPPIHPTASVDPATLHGDERGVYELVARHFLAACSRDARGQQTSV 257
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: A0A7S2WGX6_9STRA (DNA topoisomerase (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WGX6_9STRA) HSP 1 Score: 251 bits (640), Expect = 4.850e-76 Identity = 127/238 (53.36%), Postives = 164/238 (68.91%), Query Frame = 1 Query: 7 RFDELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGVARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENPRFGNYAGGLLDDGGFLWPREGRGDDSAHPPIHPTKSVDPASLQPD-EKKIYELVTKHFLACCSKDAVGHQTKV 717 RF +L D +S+GPCQFPTLGFVV+RY IQ+F PE FW I M + ED G + DF W R RLYD C LYEM VE G V+TSV + +K RP+P+STVELQ S++ I S+ TMA AE LYQ+G+ISYPRTET+ F FD+ + +N R++P++G YAG LLD+ GF PR+GR +D AHPPIHPT+ V A + D +K++YE V +H+LACCS+DA G +T V Sbjct: 219 RFAQL-DQTMSFGPCQFPTLGFVVDRYDDIQSFVPEEFWKIDMSWQSED-----GNEKCDFLWERQRLYDRLACATLYEMCVEAGTGVITSVLQKPKSKWRPLPLSTVELQVACSKYLRISSQDTMAAAERLYQKGLISYPRTETDSFAASFDLRSFVNLQRQSPQWGQYAGMLLDENGFREPRQGRKNDEAHPPIHPTQYV--AQFENDNQKRVYEYVVRHYLACCSQDAKGSETTV 448
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: A0A072NXV4_9EURO (DNA topoisomerase n=1 Tax=Exophiala aquamarina CBS 119918 TaxID=1182545 RepID=A0A072NXV4_9EURO) HSP 1 Score: 238 bits (608), Expect = 4.510e-73 Identity = 117/240 (48.75%), Postives = 162/240 (67.50%), Query Frame = 1 Query: 1 QTRFDELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGVARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENPRFGNYAGGLLDDGG-FLWPREGRGDDSAHPPIHPTKSVDPASLQPDEKKIYELVTKHFLACCSKDAVGHQTKV 717 Q + L+D ISYG CQFPTLGFVV+RY R++ F+PE FW +K+ + + + +F+W RG L+D A TV++E ++ +A VT V+ + +K RP+P++TVELQ + SRF H+ S + M+VAE LY +G ISYPRTET++F REFD TL+ ++ R+G YA GLL +GG F PR GR +D AHPPIHP V P +L +EKK+YE VT+ +LACCS+DA G T + Sbjct: 32 QRLSENLKDQTISYGSCQFPTLGFVVDRYNRVRNFKPETFWLLKLMHTRDR-------IKVNFSWKRGHLFDRAIVTVIFEACLDAKLAQVTKVQKKPTSKWRPLPLTTVELQIQGSRFLHMTSAQVMSVAEKLYTKGFISYPRTETDQFPREFDFQTLIQRQVQDERWGQYAQGLLGEGGAFRTPRAGRHNDQAHPPIHPVNYVAPTALDQNEKKVYEFVTRRYLACCSEDAKGEATDI 264
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: A0A2T9YBU5_9FUNG (DNA topoisomerase n=1 Tax=Furculomyces boomerangus TaxID=61424 RepID=A0A2T9YBU5_9FUNG) HSP 1 Score: 248 bits (634), Expect = 2.310e-72 Identity = 114/239 (47.70%), Postives = 165/239 (69.04%), Query Frame = 1 Query: 1 QTRFDELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGVARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENPRFGNYAGGLLDDGGFLWPREGRGDDSAHPPIHPTKSVDPASLQPDEKKIYELVTKHFLACCSKDAVGHQTKV 717 Q R+ E+Q+ VISYG CQFPTLGFVV+RYKR++ F PE F+S+ +E+ D +A F W R R++D C +Y D +A +T E+++ ++ +P+P+STVE++K + R+ + S++TM VAE LY +G ISYPRTET+ F + FD+ +L++ E+P +G +A L++ GGF WPR G+ +D AHPPIHPT V L DEKK+YEL+T+ FLACCSK+A+G+QT V Sbjct: 197 QRRYAEIQNKVISYGSCQFPTLGFVVDRYKRVKEFVPETFYSLVLEHQMAD------TEKAIFKWKRNRIFDLETCFAIYSSCCVDPIATITQAESKQKSRFKPIPLSTVEMEKMSIRYLKMDSQKTMKVAEQLYNKGFISYPRTETDMFDKTFDLKSLISKQTEDPTWGGFAKKLIEGGGFEWPRNGKNNDKAHPPIHPTSYVSGNMLSSDEKKLYELITRRFLACCSKNAIGYQTTV 429
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: B8BZX1_THAPS (DNA topoisomerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZX1_THAPS) HSP 1 Score: 241 bits (614), Expect = 6.450e-72 Identity = 126/242 (52.07%), Postives = 161/242 (66.53%), Query Frame = 1 Query: 1 QTRFDELQD-GVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGVARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRE-NPRFGNYAGGLLDDGGFLWPREGRGDDSAHPPIHPTKSVDPASL-QPDEKKIYELVTKHFLACCSKDAVGHQTKV 717 Q +FD + GVISYGPCQFPTLGFVVER+ RI+ F PE FW I+M + S R + W R RLYD LY+ +E G AV+ S+ R K RP+P++TVELQKRAS++ I SE M AE LYQ+G ISYPRTETEKF+ EFD + L+ F+ FGNYA LL + F PR G+ DD+AHPPI P K+VDP ++ P ++K+Y LV KH+LACCS+DAVG +T++ Sbjct: 216 QKKFDGFGERGVISYGPCQFPTLGFVVERWARIETFVPEDFWFIEMTIRLNEDGSVSRSIRLN--WKRVRLYDRVMTIALYDACLEAGAAVIVSLTGRPKNKWRPIPLATVELQKRASKYLRIGSEELMQKAEELYQQGFISYPRTETEKFRPEFDHHALIQSFQAVQGEFGNYATSLLSNSNFQNPRAGQNDDNAHPPITPAKAVDPQTIADPIQRKVYTLVVKHYLACCSRDAVGRETEL 455
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: A0A4D9CZ97_9STRA (DNA topoisomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ97_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.160e-71 Identity = 133/257 (51.75%), Postives = 168/257 (65.37%), Query Frame = 1 Query: 1 QTRFDELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYA---EEDPASPGGVARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENPRFGNYA----GGLLDDGG----------FLWPREGRGDDSAHPPIHPTKSVDPASLQ-PDEKKIYELVTKHFLACCSKDAVGHQTKV 717 Q +FD ++D +ISYGPCQFPT+GFVV+RYK I++FQ E FW I+M Y E P G R F W R RL+D A C VLY M VE A VT V A T+ RP+P+STVELQK+ASRF ++ S+ M VAE LY +G ISYPRTETE F R+ D+ +L+ + +P +G +A GG ++GG F +PR+G DD AHPPIHPTK P L+ DE+K+YELV +HFLACCS DA G +TKV Sbjct: 200 QGKFDGVEDSIISYGPCQFPTMGFVVDRYKAIESFQREEFWRIQMAYRGARENGDEGPQGFTR--FQWKRERLFDEAACAVLYVMVVEAKEARVTYVNAAPATRDRPLPLSTVELQKKASRFFNMSSDVCMHVAEELYTKGFISYPRTETESFSRDADLRSLIAEQGRHPAWGAFARELVGGGEEEGGQHGRDSGAGKFRFPRKGSKDDQAHPPIHPTKLAAPQELKGTDEQKVYELVVRHFLACCSDDAKGKRTKV 454
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: A0A7S2LVS8_9STRA (DNA topoisomerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVS8_9STRA) HSP 1 Score: 241 bits (615), Expect = 6.610e-71 Identity = 133/257 (51.75%), Postives = 164/257 (63.81%), Query Frame = 1 Query: 1 QTRFDELQD-GVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGVARAD---------------FAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENP-RFGNYAGGLLDDGGFLWPREGRGDDSAHPPIHPTKSVDPASL-QPDEKKIYELVTKHFLACCSKDAVGHQTKV 717 Q +FD QD GVISYGPCQFPTLGFVVER+ RI+ F PE FW+I+M G V +D W RGRLYD A L + E G AVVTS+ R K RPVP++TVELQKRAS++ I SE M AE LY +G ISYPRTETEKF+ EF+ +TL+ F+ FG+YA LL D F PR G+ DD+AHPPI P K+VDP ++ P ++KIY LV KH+LACCS+DAVG +T++ Sbjct: 36 QKKFDGFQDSGVISYGPCQFPTLGFVVERWARIETFVPEDFWTIEMSIRLN---GDGSVNNSDQNGNSNNNQQSRPIKLTWKRGRLYDRAMTMALCDACQEAGEAVVTSLTGRPKNKWRPVPLATVELQKRASKYLRIGSEELMQKAEELYHQGFISYPRTETEKFRPEFNHHTLIQSFQAVAGEFGDYANRLLSDNNFQNPRAGQNDDNAHPPITPAKAVDPQTIADPTQRKIYTLVVKHYLACCSRDAVGRETEL 289
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: A0A453IUP6_AEGTS (DNA topoisomerase n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453IUP6_AEGTS) HSP 1 Score: 228 bits (582), Expect = 8.520e-71 Identity = 118/237 (49.79%), Postives = 153/237 (64.56%), Query Frame = 1 Query: 16 ELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGVARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENPRFGNYAGGLLDDGGFLW--PREGRGDDSAHPPIHPTK-SVDPASLQPDEKKIYELVTKHFLACCSKDAVGHQTKV 717 E ++ V+SYGPCQFPTLGF+VER+ IQA +PE FW+I + ++ A F W RG L+D++ V+YEM V + +A V +V + K P P+STVELQKRASR C + SE TM VAE LYQ G ISYPRTET+ F D++ ++ + ++P +G YA LL+ LW P G DD AHPPIHPTK S + PD KK+YELV +HFLACCS+ AVG +T V Sbjct: 45 EERNMVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCSHTSDE-------GTASFIWIRGHLFDYSSAVVIYEMCVHEPMATVQNVRNQEKLKYPPYPLSTVELQKRASRCCRMSSEHTMKVAEELYQAGFISYPRTETDSFSPNTDLHAIVREQVDHPDWGTYAQRLLNPEERLWRNPSNGGHDDKAHPPIHPTKFSTGENNWSPDHKKVYELVVRHFLACCSQPAVGAETTV 274
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Match: A0A0D2E9R9_9EURO (DNA topoisomerase n=1 Tax=Exophiala xenobiotica TaxID=348802 RepID=A0A0D2E9R9_9EURO) HSP 1 Score: 236 bits (601), Expect = 2.060e-70 Identity = 113/239 (47.28%), Postives = 160/239 (66.95%), Query Frame = 1 Query: 1 QTRFDELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEDPASPGGVARADFAWARGRLYDHACCTVLYEMTVEDGVAVVTSVEARRVTKVRPVPMSTVELQKRASRFCHIPSERTMAVAEALYQRGVISYPRTETEKFKREFDINTLLNDFRENPRFGNYAGGLLDDGGFLWPREGRGDDSAHPPIHPTKSVDPASLQPDEKKIYELVTKHFLACCSKDAVGHQTKV 717 Q+ + L VISYG CQFPTLGFVV+RY R++ F+PE FW IK+ + + + +F W RG L+D A T+++E +++ A VT V+ + +K RP+P++TVELQK+ SRF + S++ M+ AE LYQ+G ISYPRTET++F REF + ++ +N ++G +A GLLD GGF PR G +D AHPPIHP D ++LQ D+KK+YE V + FLACCS+DA G T + Sbjct: 199 QSLSENLSQAVISYGSCQFPTLGFVVDRYNRVRNFKPETFWLIKLMHIRDR-------IKVNFNWRRGHLFDRAAVTIIFEACLDEKYATVTKVQKKPTSKWRPLPLTTVELQKQGSRFLRMSSQQVMSAAEKLYQQGFISYPRTETDQFPREFGFDPIIQRQTQNNQWGQFAQGLLD-GGFRTPRSGSHNDQAHPPIHPVNYADASALQQDQKKVYEFVVRRFLACCSEDAKGEATDI 429 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10422.458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10422.458.1 >prot_D-dudresnayi_contig10422.458.1 ID=prot_D-dudresnayi_contig10422.458.1|Name=mRNA_D-dudresnayi_contig10422.458.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=240bp QTRFDELQDGVISYGPCQFPTLGFVVERYKRIQAFQPEAFWSIKMEYAEEback to top mRNA from alignment at D-dudresnayi_contig10422:1687..10778- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10422.458.1 ID=mRNA_D-dudresnayi_contig10422.458.1|Name=mRNA_D-dudresnayi_contig10422.458.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=9092bp|location=Sequence derived from alignment at D-dudresnayi_contig10422:1687..10778- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10422:1687..10778- >mRNA_D-dudresnayi_contig10422.458.1 ID=mRNA_D-dudresnayi_contig10422.458.1|Name=mRNA_D-dudresnayi_contig10422.458.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1440bp|location=Sequence derived from alignment at D-dudresnayi_contig10422:1687..10778- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |