mRNA_D-dudresnayi_contig1030.328.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1030.328.1
Unique NamemRNA_D-dudresnayi_contig1030.328.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1030.328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1030contigD-dudresnayi_contig1030:1089..1507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size421
Cds size312
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927529.1576226-UTR-D-dudresnayi_contig1030:1088..11951622927529.1576226-UTR-D-dudresnayi_contig1030:1088..1195Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1030 1089..1195 +
1690556794.2754693-UTR-D-dudresnayi_contig1030:1088..11951690556794.2754693-UTR-D-dudresnayi_contig1030:1088..1195Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1030 1089..1195 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927529.1720734-CDS-D-dudresnayi_contig1030:1195..15071622927529.1720734-CDS-D-dudresnayi_contig1030:1195..1507Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1030 1196..1507 +
1690556794.2856865-CDS-D-dudresnayi_contig1030:1195..15071690556794.2856865-CDS-D-dudresnayi_contig1030:1195..1507Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1030 1196..1507 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1030.328.1prot_D-dudresnayi_contig1030.328.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1030 1196..1507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1030.328.1

>prot_D-dudresnayi_contig1030.328.1 ID=prot_D-dudresnayi_contig1030.328.1|Name=mRNA_D-dudresnayi_contig1030.328.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=104bp
MRRVPSPPVPCLAFPRFPHAADCDPCLCRPHPHMNSRNLCRVAAVVSRFG
ASGVLEGTTGGVGRADDGACSAAFHLSSWIFASFLHYDCLSFLRRESRTL
NYHL
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mRNA from alignment at D-dudresnayi_contig1030:1089..1507+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1030.328.1 ID=mRNA_D-dudresnayi_contig1030.328.1|Name=mRNA_D-dudresnayi_contig1030.328.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=419bp|location=Sequence derived from alignment at D-dudresnayi_contig1030:1089..1507+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTGCCTTCTCATCCCCTGCCCTTCCAACGCTGCCGACTGACGCCTCTGCT
GCTGCTCCTTAAGGGTGTCCGTCGACTGCCTCCGCGCCCCTTCCCCCCTG
CGAATGGATGCGCCGCGTCCCTTCTCCTCCTGTCCCCTGCCTCGCATTTC
CCCGTTTTCCTCATGCTGCCGACTGTGACCCCTGCCTCTGTCGGCCTCAT
CCGCATATGAACTCCCGTAATCTTTGCAGGGTCGCGGCCGTTGTTTCTCG
GTTTGGCGCGAGCGGGGTCTTGGAGGGGACAACGGGCGGGGTGGGGCGTG
CGGACGATGGTGCGTGCTCTGCTGCGTTTCATTTGTCCTCCTGGATCTTC
GCCTCCTTTCTGCACTACGACTGTCTGTCCTTCTTACGGCGAGAGTCCCG
TACCCTGAACTACCACCTG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1030:1089..1507+

>mRNA_D-dudresnayi_contig1030.328.1 ID=mRNA_D-dudresnayi_contig1030.328.1|Name=mRNA_D-dudresnayi_contig1030.328.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at D-dudresnayi_contig1030:1089..1507+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCGCCGCGTCCCTTCTCCTCCTGTCCCCTGCCTCGCATTTCCCCGTTT
TCCTCATGCTGCCGACTGTGACCCCTGCCTCTGTCGGCCTCATCCGCATA
TGAACTCCCGTAATCTTTGCAGGGTCGCGGCCGTTGTTTCTCGGTTTGGC
GCGAGCGGGGTCTTGGAGGGGACAACGGGCGGGGTGGGGCGTGCGGACGA
TGGTGCGTGCTCTGCTGCGTTTCATTTGTCCTCCTGGATCTTCGCCTCCT
TTCTGCACTACGACTGTCTGTCCTTCTTACGGCGAGAGTCCCGTACCCTG
AACTACCACCTGATGCGCCGCGTCCCTTCTCCTCCTGTCCCCTGCCTCGC
ATTTCCCCGTTTTCCTCATGCTGCCGACTGTGACCCCTGCCTCTGTCGGC
CTCATCCGCATATGAACTCCCGTAATCTTTGCAGGGTCGCGGCCGTTGTT
TCTCGGTTTGGCGCGAGCGGGGTCTTGGAGGGGACAACGGGCGGGGTGGG
GCGTGCGGACGATGGTGCGTGCTCTGCTGCGTTTCATTTGTCCTCCTGGA
TCTTCGCCTCCTTTCTGCACTACGACTGTCTGTCCTTCTTACGGCGAGAG
TCCCGTACCCTGAACTACCACCTG
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