mRNA_D-dudresnayi_contig10283.318.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10283.318.1
Unique NamemRNA_D-dudresnayi_contig10283.318.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10283.318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10283contigD-dudresnayi_contig10283:8204..9876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size306
Cds size303
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927527.904453-CDS-D-dudresnayi_contig10283:8205..83791622927527.904453-CDS-D-dudresnayi_contig10283:8205..8379Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10283 8206..8379 -
1690556793.4991572-CDS-D-dudresnayi_contig10283:8205..83791690556793.4991572-CDS-D-dudresnayi_contig10283:8205..8379Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10283 8206..8379 -
1622927527.9198928-CDS-D-dudresnayi_contig10283:9747..98761622927527.9198928-CDS-D-dudresnayi_contig10283:9747..9876Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10283 9748..9876 -
1690556793.508529-CDS-D-dudresnayi_contig10283:9747..98761690556793.508529-CDS-D-dudresnayi_contig10283:9747..9876Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10283 9748..9876 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10283.318.1prot_D-dudresnayi_contig10283.318.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10283 8206..9876 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10283.318.1

>prot_D-dudresnayi_contig10283.318.1 ID=prot_D-dudresnayi_contig10283.318.1|Name=mRNA_D-dudresnayi_contig10283.318.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=101bp
VEESHSSLARLFHAAHEYLDGCGHDVVRRGRGASQPSAGHIPQRLLPGRE
PIVHGTAWHAGGCRLYRNSTRSQCTPSLCSRNGSRACLVAARENGVVIVV
D
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mRNA from alignment at D-dudresnayi_contig10283:8204..9876-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10283.318.1 ID=mRNA_D-dudresnayi_contig10283.318.1|Name=mRNA_D-dudresnayi_contig10283.318.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1673bp|location=Sequence derived from alignment at D-dudresnayi_contig10283:8204..9876- (Desmarestia dudresnayi DdudBR16 monoicous)
GTTGAAGAAAGCCATTCGTCTCTTGCGAGACTCTTCCACGCGGCGCACGA
GTATCTTGATGGATGTGGACACGATGTCGTTCGACGCGGCCGTGGTGCGT
CTCAACCCTCTGCTGGACACATCCCGCAGGTGGGGCGTGGTACGAACGAA
ACAAAAAGAAGTACATGTTAGTTAGCGATCGTTAGAGAGAAAATTTCTCA
GAAGTTTATTAGTTGCTATTAGTACAGTGGGGTCATTAAGGTTAGGGTTA
CGGGTAGTGCTAAGAGTTTCCTAGCATTTTCTGATAATCCACGTCTCTGT
ACTATAAGTGTAATAAAATATATAAATTTTTTACGAGATCTCTATAACGA
ACGGTATAACTACTGTACCTCACAAAACGCGCGCGTGTGTGTGGTAGGTT
GAGCCGCCTCCTTAGCGTTTTTTTTTTTTTGTTGTAGACCAGATGTTGGT
ACTATTAGATGTATCATGTATCATGTATCATTAGTAACAACGTGGGCTGT
TCAGCATTTTCGGAAAATTCTACCACTAGCTAGCCCTATGACCCTCACCC
TAACGGACACACGAACACACGGTACACTACAGTAATAGAGAGTCAAACCC
TCTGTAAAGTTCCTGTATAAAGTTCTGTTGTACAAGAACCCTAAACCCTA
CTGGGTTGGTTTGACGTATCATGTTACGGTAGTAGGCCATTTCGGTGGGT
GCCGTGTCCTGTACCGGTACACTTTTCGACGTAAACAAAAAACGTTTTCG
GGTATGATACTTCGAAGTATGACCTTATGGTAGATATATATATATGGTAC
TATCGTCGTTTGCGGCGACGGTGTCATATCCAAGCTCTCTGCCCTAAGGT
GAGACTCTCATGAAAGTATGTGGGACGGATGAACGCGATATCGAACAGGG
TCGAGCATGGCGTGTCAAGCATGGCGTGTGGCGGTTTACATTTTTCTATT
TAGATATCATGGCCGAAACAGGCGCAAGTAAGTGTCAAAATCGTCGGCTG
TCGGGGCGGGGTTCTATCGCGGAGCCAACATATACTTGGTTTGCTTGCCC
AGCCGTAATAAATAACCCATTTTTTTTTTTTTATTCAAAGCTTACAGCGC
GCTTCTTGCATTAATAACTATATATACTGACCGACCTGGCAGGTCCGATT
TGAAGGTCAACCATGTGATTGGTAGCTTTTATATAAAACAGTATTGTCTT
ATCTTTCTCCACTTCTCTTGGGCTCTAGCATCGAGTTAGAATGTATTTGC
ACTGTGCGCTGTTTGCGGCGGGCCTCGCAGGCCTCAGGCATGTTTTTTAC
ACCAGTGCGGCAACAACGTAGATGTGCCTGTGTCTGTTTTTCAAATTCCG
CTGTGGTGATTTTGCCATGACACACACACACACACGATGTGCCTTTCCTT
TCCTCTAGTTTCCGTTATCTCCGTCCTCGGCGCTAAAGTTTTTTTGTTTT
GTTTTTTCCTTTTTTGTGTGTGGCCTTCCCCTCGGCACTGCGGACAGCGC
CTACTACCTGGCCGCGAACCTATCGTCCACGGCACGGCATGGCACGCAGG
CGGGTGCCGCCTCTACCGCAACAGCACAAGATCCCAGTGTACTCCGTCTT
TGTGTAGCCGTAACGGCAGCCGCGCTTGCCTTGTGGCTGCTCGTGAGAAC
GGTGTTGTTATCGTCGTCGACGC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10283:8204..9876-

>mRNA_D-dudresnayi_contig10283.318.1 ID=mRNA_D-dudresnayi_contig10283.318.1|Name=mRNA_D-dudresnayi_contig10283.318.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=606bp|location=Sequence derived from alignment at D-dudresnayi_contig10283:8204..9876- (Desmarestia dudresnayi DdudBR16 monoicous)
GTTGAAGAAAGCCATTCGTCTCTTGCGAGACTCTTCCACGCGGCGCACGA
GTATCTTGATGGATGTGGACACGATGTCGTTCGACGCGGCCGTGGTGCGT
CTCAACCCTCTGCTGGACACATCCCGCAGGTTGAAGAAAGCCATTCGTCT
CTTGCGAGACTCTTCCACGCGGCGCACGAGTATCTTGATGGATGTGGACA
CGATGTCGTTCGACGCGGCCGTGGTGCGTCTCAACCCTCTGCTGGACACA
TCCCGCAGCGCCTACTACCTGGCCGCGAACCTATCGTCCACGGCACGGCA
TGGCACGCAGGCGGGTGCCGCCTCTACCGCAACAGCACAAGATCCCAGTG
TACTCCGTCTTTGTGTAGCCGTAACGGCAGCCGCGCTTGCCTTGTGGCTG
CTCGTGAGAACGGTGTTGTTATCGTCGTCGACCGCCTACTACCTGGCCGC
GAACCTATCGTCCACGGCACGGCATGGCACGCAGGCGGGTGCCGCCTCTA
CCGCAACAGCACAAGATCCCAGTGTACTCCGTCTTTGTGTAGCCGTAACG
GCAGCCGCGCTTGCCTTGTGGCTGCTCGTGAGAACGGTGTTGTTATCGTC
GTCGAC
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