mRNA_D-dudresnayi_contig998.28789.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig998.28789.1
Unique NamemRNA_D-dudresnayi_contig998.28789.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: D7G474_ECTSI (Agmatine deiminase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G474_ECTSI)

HSP 1 Score: 555 bits (1430), Expect = 9.740e-192
Identity = 259/355 (72.96%), Postives = 300/355 (84.51%), Query Frame = 1
Query:    1 RTWMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSD----EQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKADMILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQPLGIT 1053
            RTWMLWP RPDTW++SARPAQ AF+AVA  I RFEPVTVG PS +  SA+ LL+A  + +  I+QDDAW+RDTGP FVV  ++S+    ++G R+VRGVDWSFNAWGG  GGCFSNW KDDAIA TVLGL  A+RYKA+M+LEGGSVHVDGEGT+ITTEECLLN NRNP+ T+ +IE  LRDYLGV+LVLWLG+GV GD DTDGHVDNLVAFV PGEVVLHWTD+  DPQHAVS DALRRLE F+DARGR++KV KCPLPGPL+ +++++ S+E T GSRERA GDRLAASYVNFYLANGAV+LPGY VPEDEAA+ LFK I+PER V+QV TR VALGGGNIHCITQ QP+G T
Sbjct:   31 RTWMLWPVRPDTWKESARPAQLAFAAVAKAIARFEPVTVGVPSSQLQSAQPLLDATGIGIAVIEQDDAWIRDTGPTFVVGGTRSESSERQRGMRNVRGVDWSFNAWGGEFGGCFSNWDKDDAIASTVLGLVGADRYKANMVLEGGSVHVDGEGTVITTEECLLNPNRNPTFTKSEIEKHLRDYLGVKLVLWLGQGVTGDVDTDGHVDNLVAFVHPGEVVLHWTDNTEDPQHAVSLDALRRLEAFIDARGRQLKVHKCPLPGPLHTTEEDVSSLEHTLGSRERAQGDRLAASYVNFYLANGAVILPGYGVPEDEAAVRLFKAIYPEREVIQVDTRAVALGGGNIHCITQQQPVGAT 385          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: A0A553GVT0_9PSED (Agmatine deiminase n=1 Tax=Pseudomonas mangiferae TaxID=2593654 RepID=A0A553GVT0_9PSED)

HSP 1 Score: 406 bits (1043), Expect = 1.350e-133
Identity = 198/347 (57.06%), Postives = 242/347 (69.74%), Query Frame = 1
Query:    4 TWMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKAD-MILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQP 1041
            TWM+WP RPD WR   +PAQ AF+AVA  I RFEPVTVG  +G+  +A A L+  N+ VV I  DDAW+RDTGP FV+     DE+G+  VRGVDW+FNAWGG LGG +  W +DD +A  +LGL    RY+ +  +LEGGS+HVDGEGTLITTEECLLN NRNP L R DIE  LRD+L V+ V+WL  G+  D +TDGHVDN   FVRPGEV+L WTDD  DP HA    AL+ LE   DARGR + V K P+PGPL+ S+ E   +++  GS+ R    RLA SYVNF + NG V+ P +D P+DEAA  L + +FP+R VV V  RE+ LGGGNIHCITQ QP
Sbjct:   25 TWMVWPERPDNWRLGGKPAQAAFTAVARAIARFEPVTVGVSAGQYANASARLDDPNIRVVEISNDDAWVRDTGPTFVI-----DERGE--VRGVDWTFNAWGGLLGGLYFPWQRDDQVAGKILGLERCARYRTEGFVLEGGSIHVDGEGTLITTEECLLNRNRNPHLARADIEAVLRDHLAVDTVIWLPDGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPQDPNHARCQAALKVLEQARDARGRALTVHKMPIPGPLHASEAECAGVDAAVGSQAREAAVRLAGSYVNFLIVNGGVIAPSFDDPQDEAARTLLQRLFPDREVVMVPGREILLGGGNIHCITQQQP 363          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: A0A2P6V231_9CHLO (Agmatine deiminase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V231_9CHLO)

HSP 1 Score: 402 bits (1033), Expect = 1.190e-131
Identity = 194/350 (55.43%), Postives = 244/350 (69.71%), Query Frame = 1
Query:    1 RTWMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKADMILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYD---VPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQP 1041
            RTWM WP RPD WR+   PAQ AF+AVA  I +FEPVTV A   +  +ARA+L A +V VV I QDDAW+RDTGP FV+ +  S   GQR + G+DW FNAWGG  GG ++ W +D A+A TVL  A A R+   +++EGGS+H DGEGTL+TTEECLLN NRNPSL+R +IE +LR  LGV+ V+WL +G+ GD DT+GH+DN   F RPG V+L WTDD +DPQH +S +ALR L    DA+GR++KV K P P PL+ S+DE E ++   GS+ R  GDRLAASY+NFYL NG +V+P +       D+ A       FP R VV V TR++ LGGGNIHCITQ QP
Sbjct:   39 RTWMGWPERPDNWRQGGAPAQRAFAAVAAAIAQFEPVTVAANEAQVANARAMLPA-SVEVVCIPQDDAWLRDTGPTFVLREEAS---GQRSLGGIDWVFNAWGGGEGGMYATWERDQAVAATVLQAASARRFACPIVMEGGSLHADGEGTLLTTEECLLNPNRNPSLSRDEIEGWLRRMLGVQKVIWLPRGLCGDDDTNGHIDNFACFARPGTVLLAWTDDASDPQHEISVEALRVLSQATDAKGRQLKVVKVPCPPPLHYSQDEAEGVKEVHGSKARVAGDRLAASYINFYLCNGGLVMPAFGGAAAEADKRAQQALAEAFPGRRVVAVPTRDIVLGGGNIHCITQQQP 384          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: A0A1F9PEL1_9DELT (Putative agmatine deiminase n=1 Tax=Desulfobacterales bacterium RIFOXYA12_FULL_46_15 TaxID=1797914 RepID=A0A1F9PEL1_9DELT)

HSP 1 Score: 396 bits (1017), Expect = 9.500e-130
Identity = 190/346 (54.91%), Postives = 243/346 (70.23%), Query Frame = 1
Query:    7 WMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAE-NVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKADMILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQP 1041
            WMLWP R D WR  A PA+ AFSAVA  I  FEPV +G       +A+ LL++  N+ +V ++ DDAWMRD GP F+ N+       Q  VRG+DW FNAWGG  GG +  W KD+ IAR+V+   +   YKA +ILEGGS+H DGEGTL+TTE+CLLN NRNPSL++  IE  L++YLG+  ++WL +GVV D +TDGHVDN+  F +PGEV+LHWTDD +DPQ+ +S DAL+RL    DA+GR I V K   PGPL+MS++E +SIE T     R  G RLAASYVNFY+AN  VV+P +D P DE A+ L ++IFP+R ++ V  RE+ LGGGNIHCITQ QP
Sbjct:   27 WMLWPERKDNWRLDAGPAKKAFSAVAKAIALFEPVFMGVSKQGLQTAKHLLSSHSNIILVEMESDDAWMRDVGPTFLKNR-------QGEVRGIDWGFNAWGGLNGGLYFPWDKDEKIARSVMEKTNVNGYKAPIILEGGSIHTDGEGTLLTTEQCLLNPNRNPSLSKDQIEFILKNYLGINTIIWLSQGVVMD-ETDGHVDNICCFSKPGEVLLHWTDDPSDPQYEISEDALKRLSKARDAKGRAITVHKLHQPGPLFMSEEESKSIEKTNPGMIREKGARLAASYVNFYIANSGVVMPVFDDPHDEDALALVRSIFPKRKIIPVKAREILLGGGNIHCITQQQP 364          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: A0A534D6J5_9GAMM (Putative agmatine deiminase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534D6J5_9GAMM)

HSP 1 Score: 396 bits (1017), Expect = 1.480e-129
Identity = 195/347 (56.20%), Postives = 239/347 (68.88%), Query Frame = 1
Query:    7 WMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKADMILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQPLG 1047
            WMLWP RPD WR++ARPAQ AF+ VA  I RFEPVTVG  +    +ARALL A+ V VV +  DDAWMRD GP  VV+       G+  VRGVDW FNAWGG  GG +  W +DD +AR VL +   +RY+A ++ EGG++HVDG+GT + TEECLLN NRNP L R DIE  LRDYLGV  ++WLG+GV  D +TDGH+DNL  FVRPGEV L WTD   DPQHA+S DA  RL    DARGRR+KV++ P+PGPL +   E   + +  G+R R  G+RLAASYVNFY+ANG +++P  D   D  A    K++FP R VV V  RE+ LGGG+IHCITQ  P G
Sbjct:   27 WMLWPERPDNWREAARPAQLAFAQVAAAIARFEPVTVGVSNPHYTAARALLPAD-VRVVEMAHDDAWMRDVGPTCVVD-------GRGTVRGVDWRFNAWGGLAGGLYFPWDQDDLVARKVLEIERLDRYRAALVNEGGAIHVDGDGTAMVTEECLLNANRNPRLAREDIERCLRDYLGVSHMIWLGRGVFND-ETDGHIDNLACFVRPGEVCLTWTDRRRDPQHAISFDAWERLHEARDARGRRLKVQRLPMPGPLSLRAREAAGVVAREGTRGRVAGERLAASYVNFYIANGGIIMPLLDARTDRTAARRLKSLFPARRVVGVPAREILLGGGSIHCITQQIPAG 364          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: A0A1I4PGT0_9PSED (Agmatine deiminase n=1 Tax=Pseudomonas yangmingensis TaxID=1720063 RepID=A0A1I4PGT0_9PSED)

HSP 1 Score: 394 bits (1011), Expect = 7.830e-129
Identity = 190/347 (54.76%), Postives = 236/347 (68.01%), Query Frame = 1
Query:    4 TWMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKAD-MILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQP 1041
            TWMLWP RPD WR  A+PAQ AF+ VA  I  FEPVTVG  + +  +A + L+   + VV +  DDAW+RDTGP FVVN       GQ  +RGVDW+FNAWGG  GG +  W +DD +A  +L L    RY+ +  +LEGG+ HVDGEGTLITTEECLLN NRNP L R +IE  L DYLG++ V+WL +G+  D +TDGHVDN   FVRPGEV+L WTDD  DP HA    ALR L+   DARGR ++V + P+PGPLY S +E   ++  PGS+ R    RLAASYVNF + NG ++ P +D P D+AA  L + +FP+R VV V  RE+ LGGGNIHCITQ QP
Sbjct:   25 TWMLWPERPDNWRLGAKPAQAAFAEVARAIAGFEPVTVGVSAAQYGNASSQLDHPGIRVVELSSDDAWVRDTGPTFVVN-------GQGGLRGVDWTFNAWGGFNGGLYWPWQRDDQVAGKILSLERCPRYRTEGFVLEGGAFHVDGEGTLITTEECLLNANRNPQLLREEIELKLADYLGIDKVIWLPQGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPDDPNHARCQTALRVLQASRDARGRELQVHRMPIPGPLYASAEECAGVDRVPGSQARDPSVRLAASYVNFLVVNGGIIAPAFDDPHDQAARELLEQLFPDRRVVMVPGREILLGGGNIHCITQQQP 363          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: A0A1Q6WJ67_9GAMM (Putative agmatine deiminase n=9 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A1Q6WJ67_9GAMM)

HSP 1 Score: 394 bits (1011), Expect = 8.980e-129
Identity = 196/347 (56.48%), Postives = 237/347 (68.30%), Query Frame = 1
Query:    7 WMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKADMILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQPLG 1047
            WMLWP RPD WR++ARPAQ AF+ VA  I +FEPV+VG       +ARALL  E V VV +  DDAWMRD GP  VV+       G+  VRGVDW FNAWGG  GG +  W +DD +AR VL +   ERY+A ++ EGG+VHVDGEGT + TEECLLN NRNPSL R D+E  LR+YLGV  ++WLG+GV  D +T GH+DNL  FVRPGEV L WTD   DPQHA S DA  RL+   DARGRR++V + P+PGPL +   E   + +  G+R R  G+RLAASYVNFY+ANG +V+P  D   D AA    K +FP+R VV V  RE+ LGGGNIHCITQ  P G
Sbjct:   27 WMLWPERPDNWREAARPAQLAFAQVAAAIAQFEPVSVGVSGPHYAAARALL-PETVRVVEMAHDDAWMRDVGPTCVVS-------GRGVVRGVDWRFNAWGGLAGGLYFPWDQDDLVARKVLEIERLERYRAPLVNEGGAVHVDGEGTALVTEECLLNANRNPSLERTDVERLLREYLGVSQIIWLGRGVFND-ETGGHIDNLACFVRPGEVCLTWTDRERDPQHASSLDAWERLKDARDARGRRLQVTRLPMPGPLTLHAREAAGVIAREGTRPRTAGERLAASYVNFYIANGGIVMPLLDRRTDRAAAQRLKRLFPDRRVVGVPAREILLGGGNIHCITQQIPAG 364          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: N2J929_9PSED (Agmatine deiminase n=8 Tax=Pseudomonas TaxID=286 RepID=N2J929_9PSED)

HSP 1 Score: 393 bits (1010), Expect = 1.270e-128
Identity = 190/346 (54.91%), Postives = 239/346 (69.08%), Query Frame = 1
Query:    7 WMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKA-DMILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQP 1041
            WM+WP R D WR  A+PAQ AF+ VA  I RFEPVTVG  + + D+A A LN   + VV I  DDAW RDTGP FV+N     +QG+  VRGVDW+FNAWGG +GG +  W +DD +A  +L +    RY+  D +LEGGS+HVDGEGTLITT ECLLN NRNP L++ +IE  L DYL V+ V+WL  G+  D +TDGHVDN   +VRP EV+L W DD  DP +A    AL  LE   DA+GR+  V K P PGPLY S +E E+++++ GS+ R  G+RLAASYVNF + NGA++ P +DVPED  A+ + +  FPER +VQV  RE+ LGGGNIHCITQ QP
Sbjct:   26 WMIWPERTDNWRLGAKPAQLAFTEVARAIARFEPVTVGVSAAQFDNACARLNHPAIRVVEISNDDAWARDTGPTFVIN-----DQGE--VRGVDWTFNAWGGLVGGLYFPWKRDDQVASKILMMESCPRYRTEDFVLEGGSIHVDGEGTLITTGECLLNRNRNPHLSQREIEAILSDYLAVDKVIWLPDGLYND-ETDGHVDNFCCYVRPAEVLLSWCDDENDPNYARCRAALEVLETNTDAKGRKFTVHKIPTPGPLYASDEEYETVDASVGSQPRKSGERLAASYVNFLIVNGAIIAPTFDVPEDAEALDVLQRCFPEREIVQVPGREILLGGGNIHCITQQQP 363          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: A0A534ICA0_9GAMM (Putative agmatine deiminase n=4 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534ICA0_9GAMM)

HSP 1 Score: 393 bits (1010), Expect = 1.670e-128
Identity = 199/353 (56.37%), Postives = 239/353 (67.71%), Query Frame = 1
Query:    7 WMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKADMILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQPLGITGAPP 1065
            WMLWP RPD WR++ARPAQ  F+ VA  I +FEPVTVG  +    +ARALL A  V VV +  DDAWMRD GP  VV     D +G   VRGVDW FNAWGG  GG +  W +DD +AR VL +   +RY+A ++ EGG+VHVDGEGT + TEECLLN NRNP L R DIE  +RDYLGV  ++WLG+GV  D +T GHVDNL  FVRPGEV L WTD   DPQ+A+S DA  RL+   DARGRR+KVR+ P+P PL +   E   + +  G+RER  G+RLAASYVNFY+ANG +V+P  D   D  A    K++FP R VV V  RE+ LGGGNIHCITQ  P G  G  P
Sbjct:   27 WMLWPERPDNWREAARPAQLTFARVAAAIAQFEPVTVGVSNPHYSAARALLPA-GVRVVEMAHDDAWMRDVGPTCVV-----DARGA--VRGVDWRFNAWGGLEGGLYFPWDQDDLVARKVLEIERLDRYRAPLVNEGGAVHVDGEGTALVTEECLLNANRNPRLAREDIERGVRDYLGVSHIIWLGRGVFND-ETGGHVDNLACFVRPGEVCLAWTDRRRDPQYAISLDAWERLQDARDARGRRLKVRRLPMPAPLRLRAREAAGVVAHEGTRERVAGERLAASYVNFYIANGGIVMPLLDTRTDRTAARRLKSLFPARRVVGVPAREILLGGGNIHCITQQIPAGGRGRRP 370          
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Match: A0A1H9TYI9_9GAMM (Agmatine deiminase n=6 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A1H9TYI9_9GAMM)

HSP 1 Score: 392 bits (1008), Expect = 2.210e-128
Identity = 189/347 (54.47%), Postives = 234/347 (67.44%), Query Frame = 1
Query:    4 TWMLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALLNAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWGGALGGCFSNWSKDDAIARTVLGLADAERYKAD-MILEGGSVHVDGEGTLITTEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVDNLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKCPLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGYDVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQP 1041
            TWMLWP RPD WR  A+PAQ AF+ VA  I  FEPVTVG  + +  +A   L+   + VV I  DDAW+RDTGP FV N       GQ  VRGVDW FNAWGG  GG +  W++DD +A  +LGL    RY+ D  +LEGG++HVDGEGTLITTEECLLN NRNP L R ++E  L DYLG+E V+WL +G+  D +TDGHVDN   FVRPGEV+L WTDD TDP H     ALR LE   DA+GR + V + P+PGP++ +  E   ++  PGS+ R+   RLA SY+NF + NG VV P +D P+D  A  + +++FPER VV V  RE+ LGGGNIHCITQ QP
Sbjct:   25 TWMLWPERPDNWRLGAKPAQAAFAEVARAIASFEPVTVGVSAAQYANASLQLDHPAIRVVEISSDDAWVRDTGPTFVTN-------GQGGVRGVDWVFNAWGGFDGGLYWPWNRDDQVADKILGLERCPRYRTDGFVLEGGAIHVDGEGTLITTEECLLNANRNPHLQRHEVERMLMDYLGIERVIWLPEGLYND-ETDGHVDNFCCFVRPGEVLLAWTDDPTDPNHVRCQAALRVLESSRDAQGRELTVHRMPIPGPIHATTAECAGVDQVPGSQPRSPSVRLAGSYINFLIVNGGVVAPAFDDPQDAQAQAILESLFPERRVVMVPGREILLGGGNIHCITQQQP 363          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig998.28789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G474_ECTSI9.740e-19272.96Agmatine deiminase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A553GVT0_9PSED1.350e-13357.06Agmatine deiminase n=1 Tax=Pseudomonas mangiferae ... [more]
A0A2P6V231_9CHLO1.190e-13155.43Agmatine deiminase n=1 Tax=Micractinium conductrix... [more]
A0A1F9PEL1_9DELT9.500e-13054.91Putative agmatine deiminase n=1 Tax=Desulfobactera... [more]
A0A534D6J5_9GAMM1.480e-12956.20Putative agmatine deiminase n=1 Tax=Gammaproteobac... [more]
A0A1I4PGT0_9PSED7.830e-12954.76Agmatine deiminase n=1 Tax=Pseudomonas yangmingens... [more]
A0A1Q6WJ67_9GAMM8.980e-12956.48Putative agmatine deiminase n=9 Tax=unclassified G... [more]
N2J929_9PSED1.270e-12854.91Agmatine deiminase n=8 Tax=Pseudomonas TaxID=286 R... [more]
A0A534ICA0_9GAMM1.670e-12856.37Putative agmatine deiminase n=4 Tax=Gammaproteobac... [more]
A0A1H9TYI9_9GAMM2.210e-12854.47Agmatine deiminase n=6 Tax=Pseudomonadaceae TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig998contigD-dudresnayi_contig998:4899..13889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score550.1
Seed ortholog evalue7.8e-154
Seed eggNOG ortholog2880.D7G474
KEGG rclassRC00177
KEGG koko:K10536
KEGG ReactionR01416
KEGG Pathwayko00330,ko01100,map00330,map01100
GOsGO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0047632,GO:0071704,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Porphyromonas-type peptidyl-arginine deiminase
EggNOG OGs2QUHM@2759,COG2957@1
EC3.5.3.12
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionagmatine deiminase
Ec32 orthologEc-02_001540.1
Exons7
Model size1998
Cds size1062
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930961.4748688-UTR-D-dudresnayi_contig998:4898..49071622930961.4748688-UTR-D-dudresnayi_contig998:4898..4907Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig998 4899..4907 +
1690557981.1349936-UTR-D-dudresnayi_contig998:4898..49071690557981.1349936-UTR-D-dudresnayi_contig998:4898..4907Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig998 4899..4907 +
1622930961.6701396-UTR-D-dudresnayi_contig998:12962..138891622930961.6701396-UTR-D-dudresnayi_contig998:12962..13889Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig998 12963..13889 +
1690557981.2414968-UTR-D-dudresnayi_contig998:12962..138891690557981.2414968-UTR-D-dudresnayi_contig998:12962..13889Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig998 12963..13889 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930961.4916174-CDS-D-dudresnayi_contig998:4907..53151622930961.4916174-CDS-D-dudresnayi_contig998:4907..5315Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 4908..5315 +
1690557981.14793-CDS-D-dudresnayi_contig998:4907..53151690557981.14793-CDS-D-dudresnayi_contig998:4907..5315Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 4908..5315 +
1622930961.5124176-CDS-D-dudresnayi_contig998:6316..63871622930961.5124176-CDS-D-dudresnayi_contig998:6316..6387Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 6317..6387 +
1690557981.1573465-CDS-D-dudresnayi_contig998:6316..63871690557981.1573465-CDS-D-dudresnayi_contig998:6316..6387Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 6317..6387 +
1622930961.5397043-CDS-D-dudresnayi_contig998:6669..68201622930961.5397043-CDS-D-dudresnayi_contig998:6669..6820Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 6670..6820 +
1690557981.1703038-CDS-D-dudresnayi_contig998:6669..68201690557981.1703038-CDS-D-dudresnayi_contig998:6669..6820Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 6670..6820 +
1622930961.571561-CDS-D-dudresnayi_contig998:7646..77541622930961.571561-CDS-D-dudresnayi_contig998:7646..7754Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 7647..7754 +
1690557981.1903322-CDS-D-dudresnayi_contig998:7646..77541690557981.1903322-CDS-D-dudresnayi_contig998:7646..7754Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 7647..7754 +
1622930961.588374-CDS-D-dudresnayi_contig998:8358..84521622930961.588374-CDS-D-dudresnayi_contig998:8358..8452Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 8359..8452 +
1690557981.2011154-CDS-D-dudresnayi_contig998:8358..84521690557981.2011154-CDS-D-dudresnayi_contig998:8358..8452Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 8359..8452 +
1622930961.6037712-CDS-D-dudresnayi_contig998:8734..88411622930961.6037712-CDS-D-dudresnayi_contig998:8734..8841Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 8735..8841 +
1690557981.211526-CDS-D-dudresnayi_contig998:8734..88411690557981.211526-CDS-D-dudresnayi_contig998:8734..8841Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 8735..8841 +
1622930961.6251073-CDS-D-dudresnayi_contig998:12839..129621622930961.6251073-CDS-D-dudresnayi_contig998:12839..12962Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 12840..12962 +
1690557981.222465-CDS-D-dudresnayi_contig998:12839..129621690557981.222465-CDS-D-dudresnayi_contig998:12839..12962Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 12840..12962 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig998.28789.1prot_D-dudresnayi_contig998.28789.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig998 4908..12962 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig998.28789.1

>prot_D-dudresnayi_contig998.28789.1 ID=prot_D-dudresnayi_contig998.28789.1|Name=mRNA_D-dudresnayi_contig998.28789.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=354bp
MLWPTRPDTWRKSARPAQTAFSAVANTIGRFEPVTVGAPSGEEDSARALL
NAENVSVVTIDQDDAWMRDTGPLFVVNKSKSDEQGQRHVRGVDWSFNAWG
GALGGCFSNWSKDDAIARTVLGLADAERYKADMILEGGSVHVDGEGTLIT
TEECLLNTNRNPSLTRGDIETFLRDYLGVELVLWLGKGVVGDTDTDGHVD
NLVAFVRPGEVVLHWTDDITDPQHAVSSDALRRLEGFVDARGRRIKVRKC
PLPGPLYMSKDEMESIESTPGSRERAHGDRLAASYVNFYLANGAVVLPGY
DVPEDEAAILLFKTIFPERYVVQVSTREVALGGGNIHCITQPQPLGITGA
PPI*
back to top

mRNA from alignment at D-dudresnayi_contig998:4899..13889+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig998.28789.1 ID=mRNA_D-dudresnayi_contig998.28789.1|Name=mRNA_D-dudresnayi_contig998.28789.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=8991bp|location=Sequence derived from alignment at D-dudresnayi_contig998:4899..13889+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGGACCTGGATGCTGTGGCCGACGCGACCCGATACCTGGCGCAAATCGGC GCGACCAGCCCAAACAGCTTTTTCCGCGGTAGCCAACACCATCGGGCGAT TCGAGCCGGTAACCGTCGGAGCTCCTTCGGGCGAAGAAGATTCAGCTCGG GCGCTCCTAAACGCTGAAAACGTGTCGGTCGTAACAATCGACCAGGACGA TGCTTGGATGCGAGACACCGGACCGCTGTTTGTCGTTAACAAATCGAAAT CGGATGAGCAGGGGCAACGTCACGTACGTGGCGTGGACTGGTCGTTCAAC GCGTGGGGGGGAGCTCTGGGAGGATGTTTCTCTAATTGGAGTAAGGATGA TGCTATCGCGAGGACAGTGCTGGGTCTTGCGGACGCTGAGCGTTACAAGG CAGATATGATCCTCGAGGTACGGCGACGCTCTCGTACAAACGGGTCAGAG TGGTCTTGAACGTCTCGTCGTACCCGCTACCAAGGTGTATGCTGTAGAGG GATGCACGCTCTAGCAGTATGATAGCTCTAGAGGTTTACATATGGATACG CACGTTGCGATAGTAGTGTTCAATAGTGCTGTGCTGTACAGCTGCCTATG TGCCCCTGTAAACATGCTCAACGAAGACGCACATGCAGCCTCTACCACAG AGGTGCGCCTACGTTTTTTTCTGCTACTGTTGTACCGTACAACCCCATGG TATGGAGCAACTTGGATTTAAGGAGTGATGTGAACCACAGGCAACGTTCC AGCTCATCACTGCCGGAAGGCAACATGTGCTGAAAACGGCGCGCAATAAT TTCACTGTCTGCTGTCCCGTTTGTACTACGTTTTCCGGGTGGAAACACCT ATCTAAATTGCCTCCCCGTCATTCCGGTTGGAGCCCAACCTGCTTGTCTT TCCATGGGGCAGGTGCTAGAAAGAGGGTTTCAGAGGATATGTACAGGTGG GTGTACGTGCGCTCTTCCCGTATAGTAGAAGCGGAGTAAATTCGGAGTTG GAGGTTCACGAAGCGTGCTGCAGCATGCGGGAGGATAAAATGGGGACCCC CAGCGGAGTTGTGTAATGCTTTACACTAAGCACCCCTGTCATTGAAGAAC TTGTTAGTGGCTAGTTCTTGATCCGTAGCGTCGATTCCGTCCTTTCGTAT CCGGTGCTCGTGTACGGAGATAATATCTGCTGTCATGATATGAAAACGTA CCCGCTTCTAGTGTTTCTAAAAATAATGTTTGGATACCACGTAAATCCAC AGTGGGTTGATGCATAATTTGTATATCCTGTGTTCGGAGAGAGCATCGTG TAGGTCTCACCGCAAATGTCTGCACCCCCATGTCATTTTTTCTTGGCCAA CGATAAGCAGGCAATGTCTACGCCCTTTTTGTTTTTCGCCATCGTTGGCA TACCGTGCCGCTGTATAGGGAGGGTCGGTGCATGTGGACGGCGAAGGGAC CCTCATCACCACGGAGGAATGCCTCCTCAACACAAATCGGTGAGAAAATT AGGTGGACTGTTGCATGTGCGTGTCATCGGTAGATACGGTACGGGTTGGT ACAGTACGTCGAAGCCGCACTTAAACTCTCAGCGGTGTAAATTCTCCTAC GGGCACTATGCTGGGTGATGCTGATTGTAGGCCGCCTGCTGCGACATAAT GCATTCTCTGATTCACTTTCGTGCTAGCTACATGATCCCGTCTAGTCGTG TGAAGCGCACCGTGCCTTTTGACATGTGTCTGCCACGACTTTGTTGCGCT CTTCCGATTCCTGGCGACCAGAAATCCAAGCCTCACAAGGGGGGACATCG AGACATTTCTGCGGGATTACCTGGGCGTGGAATTGGTGCTTTGGCTGGGA AAAGGAGTTGTTGGGGACACCGATACGGACGGACACGTTGACAACCTCGT CGCGTTTGTGCGACCTGGAGAGGTGAATATCATGCCCCCCTTTAACTGCA TTATGCAAACCACCAGTAGTGTTTTATGCTAGCGGTCAATCGTATGTACG CCCGGCAGCCATGTTGTCACCCGCACTTCCCCCTAAGGCGATAACAGCGG CGGCCGTGATACCAACAGGCACGTGAGGTCGCACCCTTGTCGTCTGGACG GGAAAAAGGACGATCCATCGTTGGGCCCTGGTTGTAAGCGGAGCATCGTG ACGGGCTCAACCCTCAACACATCGTATTTTTGGGCCGCAGAGAACATCTC TGGCGCGACAGAAGAACGCGGCAACTCTCTCAGCCGCTCGGGGACTTGCA GAGGCAGCACTACTGTAGTTGATGCCAGATTTTGGAACGGTAGCCCCCCC GGGCCGTTTAGGGTATCTCTGACTCGGCGCTTTTGGTGACTACGACGTAG TGGCTGTTGTTGCAGGAGGCATGTTGCTGTTTTTTCACTATGCTTGGTGT CGCGCGGAAGTCGCGAGGGCGTTATTAATAGCAAGCAAAAATTGATGAAA GAAAGTCGGCGAGCTATGGGAATGCCGAACCCTGTGCGCGATAAAAAAAA CCCAGCCATGTACCGGGGGGGAGAAGGGAAGACACCTATGTCCACGGCTT GCTCAGACAGGCGCGCTGCGTGATAAACGCCCTTGAGCTGGACTGGCAAG TTAATGAATTAAAGGAGTATCTCTAGATGTAGGTGGTTGGTAGCTGTGTG TTCATACTGCGGCGGCCTACCTTGACTTTTCATGGGATTTAAAGTGGCAA TTATGTGCAGCTTTTGTATCAATAGCACCCCGTTCGCCCCTGTCGCAGGT GGTTTTGCACTGGACGGACGACATTACCGACCCCCAGCACGCCGTCTCAT CCGACGCTCTCCGAAGATTAGAGGGCTTTGTCGATGCTAGGGGACGGCGT ATAAAGGTGGGCACCAGAACGGGCAGGCGACAAGTATTGCGACGTCAAAC TACCGTGCTCGTACGTCTTACATAAAATTTAGGCTTGCCTCGGTTTTGCG TGTTTGCCGATTGGTAACTTTTTTTTTTCTTGACTGAACCTATTAACTCT GACCGCGCGGCACTAAATGCTATGTGCGAAGTGGGGTGTTGAGTCAAGGG GGTGTTCGACGACCTTCCCACTTCGTGATGCCGCCGCACGAAGCCGGATC GATCGTGTTGTCGATGGCTGTACGGGCGCGTCTTCGAAGCAAACGTTGTG CTGTTGGCGTCTGGGAACCGCAAAACTCTACATTATGGTGTGACGCAACA AGAGTGGGGACAATCCAAATACGTGTACAGTATACTTCTATACAGCTCAG ACTGTTTTTTACGTTCTATGCCCAGTAAGTACCACCACATGCACCTACAT AAGCACCTTTCTGTTGAGGAATGTTGAGGAATACGGGCTTTGCAGTCGTC GATCTTCTTTGCCTCAAGCATGGCCGTGCCTTTAGCCGTTATCTTCTTTG GCCAAGCTATCTTTCGTTAGCTTTTATCTCGTATCGATGGACGTCTCCCC CCTGACGCAGGTCCGCAAGTGCCCCCTTCCGGGCCCTTTGTACATGTCGA AGGACGAGATGGAATCGATCGAGTCGACGCCGGGCTCCCGAGAACGCGCG CATGGTGAGACGCGAGATGCGACGTACAGCAACAGGAAGCGCCGTTTAGT TTGCAGGTGTAACTTCTTCATTGCACATATCAGTATAGAGTAGCGCGCTA TGTGAACGGTGGGCTGTGCTACGACAGTAGGTGGGACGTGCTGCCGTGTG TGTGTTTGTATTTGCCAGTTGTGTTTCGTCTCACCGTCGTCCGGCCGTAT ATGTCTCCCCAGAATCCCTCGACCGTCTTTTTTGACCCCACTACCGCCGT GACCCCCACACGTTGTACCGCCCTTCTCGATCCCAGGAGACCGGTTGGCG GCCTCGTACGTGAACTTTTACTTGGCGAATGGCGCTGTTGTTCTGCCGGG CTACGACGTGCCTGAGGACGAAGCGGCGATACTTTTATTTAAGGTCTGTC TACGGGTAGCACTCGGGTGTGTTCATTGATTTCGACGATGCAAAATGCAC CGACTGGTCCTGGGAATACCTGATAGTCTCCCCTTGTCTTAGTTTTTGGT GAAATCCCTGCTAACAGTGCATACGTTTTGCCGGATTGGCAAACACGTTT GAAATGGAAACGCTCATGGCTGATTGCGGTACTACAAGCATCACAGGCCA GCTCGGGTGTTCGTGTATATTCCTCTTCCAGGCAACTACCGAGATGAACT GTGTTGACAGCCCCGCGAAGCGAACATGTGGGGCAGGTACGCGGGCGTGT TCCTATGATTGGAAGTAGCCAACCTTACTGAAGCAACCGGTTTCTAGGGG TAGTTTTTGGTGTAGTACGTGAGCTACCCCCGCGCAATCGCTCCCTGTGT TCTACCGTATGGTAGGAGCACGATAGGAAAGGGCAGCGGTGGAGGCGCAG CCCAATAACATTGGCAACTAAATATGTATTTGAAGTATTGCGCTTCGAGA ATGTGTGCTATCGTCCACAGAACACCCCTGAAGAATAGAGGTATTGCCGT ACTGCCGAATGAGAGAGTCGTGTTGGTCGACGATGGGATTCAAGCACGTT ACGACGAGACCCGAGAAGGCTTATCGGACCAACAAAGAGGGTTCACAAGA AACAAAAATTTAAGACAGAAGAGGAACCAATACCGGTTTGTTGGAGTAGT TGGTTACCATGGTCGGTGCGGTAGTGATCGCAGTAGACGAGATACTTCGC TGTGATTCGACATGGATATGCCTATAGACGAGGCCATCAAAACCCCGCTG CCTTCGTATTGGTTTTGTCATCTCTCCCCTTTTTTTAAAAACGATTCTGT TAGCGAAGTACACACTGCTACCTTACGTATGTAGTCTACGCGCGATAAAT CACACGATGCTGCAGGTGTAGTTATCCGTGGTACAGACCTATGGCCGTAG ATGTACTCTACACCTACTGATGCTGATATTCTGCTGCTGGTGGTATACAA TTGTACGTGTTACTGCTGTATACAACATTCGGACAGATCGCATTGCGTTG GACATGTTTTACTGCTGCTGCTGCTGATGTGCTACTACTACTATAAAGCT ACTGTTGGTTTACTCGAACTGCGCTGGACACCATTTCAAATTGTCTGAGT GTGCCAAGACCAAAAGGTTGAGATTGTAGACTTGTGCAGGTATTCTTCTC TACTCTACTGTACAGTACTGCTGTACTACTTTTTTGCACAGTGCGACGGC TGCACTGCTGCGCTGCTGAGGTGCATACGAGTACCTTTTGGAGTTGCCCT GCTGCTCATATTTATGGGCATGTCGTCGTCTCTCACTCGCCCTTCCCAAA TCGCCGGTTGGTTCCCTTCTGTGGGCATGTCGCCATCTCTCTCTCCCTTC TAACATCGCCCGCCGACTCCCGGGCCGGGCCGTTCCCATGGCATCGGTTG CTGGTTGCTGCAAAGAGATGCTGTTGCCGAGCGTGGTGTGTTTGAAAAGA AGCACCAACTGCTGCTTGCTGCAACGGGATGCCGTTATCAAACTATGTGC AATAATAACCAAAACATGCAGGCTAACGCCTTGCTTGGTTGCTTCAGCAA CTGCTTTCTGGCCTTGGCATTCGATCTCAACGCACACTGCACGCCCGAAC CCCAAACTTGGATCGCGCTGGTGCAGCGCGTATCAGGTACGGATTGTTTA TTTATTTTTCGTCACATTAGTCCGATCCCTCGGGCCCGTGGTCACATCAG GTGCAAGGAGCATACTATACCATCATACCGCATGTCGTACATATATCACA CCGACTGGGAAAGCCTGGAGATAGAAACAACAAGTTGTGGATGGGTTCCG GGGGATAGCCTAGAATCACGACCCACAACACACCAAGAGGCACACATCGC GATGCGTCACTGGTAAGTATTGTGATAACGCGTGAAGGCAGCCGAAACTA CGATAATAAACTAAAAAACTAACCCCTCGACAAATAAGCTACCACTACCA CCGCCTGCACATTGTGCATCGCTATGAATGTACGTACTGCAGTTTTACTG TCTGAAGTGCTGTCTATACCCAACCAATGTGGGCAAGACTACAGCTGCAC TGCCTGAAGTGCTGTCTGTAACACACAGCGAAGCACGGGCAGCAGCAGTC GGTCGTGATCACTGCAAAGGATCTGCTAGTATTCATAGTACAATAATTGT CTGAAGTGCTGTTTGTGTTACCCTCTCGCACGCACGCAGAACAAATGGAG GACAAACAACGAAATATTGAGATAAACAAGCAGAGCAATAATACAACAAC AGTAGTACACGGCAGCAACAACCTCACCGGATGCCACGAGGTACAAAGAA GGTACAGTACATCTCCCTATCATCTAGTCAGGCATGCCTCACGTCAACGT CAAACTATGGCATGTCTAGTAACCCGCGCGAAAGCGCTTCGGTCTAGCGT GTCCTCTCGTCAAGCATGAAAACATGCGACTATCAACGTGCATTAGGGCT TCTGTCATCACAGCCAAAGAAAGGATGATGCACCGCTTATCCTACCCCAC GCCTCCTCGGTTCCGGCTCGCCTGCTCCGCTTCTGCTGTTCCGCTCCTGC TGCTGCTGTTTCTCGTATGCGACTCCAGCCTCCTATCGGCGAGTATCGTC CTCGCCTTCTGTCACTGGGCTCCGCATTCATACTCGCCACCGTCCTACTA TCCAATCTCCCTGTTCTTCTTCATGCAAAAACCAACCTTCTCTTAGTTGC ACCTGTGGTCCTGGTCTCGAAAAACAAAAACTCTCGCTCTAGATGTGCTC AACCAGGCCCTCTCCAGCCCGTCGACTACGACGGTCTTCATTCCATCGTT GTCGTCGAATCCAGCCTATTCAACGGCACACGCTCCCTCTATCAAGGTTA CGAGCGTCGACTTTCGGCGACGGTGTCGATCTGCCTCCGCGTACACCCGC GCCTAAACGCACTCGAGATGCTTTCCCGCTGGTTATCTTGAAAATACAAG GGTCTGCGGGTCGTAGGGGATGTACCTGATCACACCGTGTTGACCCAACT CCACCACTAACACCACGGCCTCGGCCCAGTCAGTGGCAAGAAGGAATCAC TCCTCAAGGGTGAGTCCGGCCTTGCACCCGCCAGAAAGACCCTCCCCACG CGTTGCCAACCCGGCAGGTCATAACCAAGCCAGGAGGAACCGGGGCACGG AGAGTATTATATTAGTGCTGCAAAATTACTGTTTGGAGCTGTTTGGACAT CGTTTCGGAATGATTCAGATTCGGCTCAAGAAAAAAAATGCGTAGGTTTG GCAGGAGTGAAAGTAAGAAACGCCGACAGAAAAGCGCCAACAGCACAAAA AAAAACAGCCGCATTTTGAATCGCCAAAACAGAGACTAAACCCTCAAGGG ATTTGTAAATGAATATTTGTGTTAATAATTGAAACAAATTGACTTTTGTG TTTTTAGATTCACTTTAAAAAAACAATCAAATTGAAACATGTTTTGAAAC TATGATCCAAAATTTGCCGGACGGGCTCCCTTCTTGTTTTCTTTTAAAAT GTTATAGAGGTGGAGAAATAATAGGGCGAAGATATAAACGAGATGGTAAC AAAAGAAAAGTAGGGAATTATAGCTCCAGAGTACTCTATTTTTTTTTATG CTTTGGTCCCGTTTACTAATATTACTGCAAGGGAGGATGGCTCAATGGTG AATAGCGATTTCCCTTCCAACGTTGGCCTGGATGAACGACCGACCGCCAC GTATGGTGTAATTTCAACACATGCGGAGGACTAAATCGAAGGTTGCATGA CTGGAGCTCTATCGGTCTCATCCCCCTTTGTTGTGTCGCTTGCACGCCCT AAAGCTCAGCATGAATGAAAACGCCAGGAGGCTCGTAGACCAAGTTTCTA CAACGAACGCTCAATGCTCGCCGTCCATGCTTGTCCCAGCTTTCTTATGC ACAGCTTCCCCCCCCATCTTACCTCTTTCCCCCTTTCGCAGACTATTTTT CCGGAGCGTTATGTTGTCCAAGTCAGCACGCGGGAGGTAGCGCTTGGAGG AGGAAACATACACTGCATCACACAGCCGCAGCCCCTGGGTATCACGGGTG CCCCACCCATATGATGTGGGAGTATCGACGGGTACACTGGGTTTGTTTTT TAGGTTGCAGTTTTGACAAGAGCACTGACTTGCGTGCTTTTTTCGTGCTG TGTGTATTTTCGTATTTTCCCTCTTTTTCTCTCGGTATGCAGGCTTTTTT AGTTTATTTTTTATCGGTGTGGGACGGGGGGGGTATCGCTGGCCAGCGCT TGTTGCTGTTGCCGTCGCATTTGCGAATAGGTACAGGCCCATGCGTCGTT GGTCGCACATAGTATCTACTCCCCGAAATTTTCACAACACACGATTCAGG CGAAGCCGGGTTAGCGGTGGTTTATTCCATGGAAGATGTTGGATATTAGA TTGTACAGTTGTGATATAGTTGCTACGATCGAGTAGCATTCTACCCGAAG TGTTTATGGATAGCGTCAACGCAGAGGCCCGTATGCATGTATGCATCACG GTGGCTTTAGGGGAGCGCAAGGTGCCCAATAGGGAGTGGTAACGTAAGGT TTGACTCTTATAGTGAGCAAAGCCACCTTTTTGTCTCCCTTTTTTGTAGT TCCATGTGGCGGCAAGTAGGCCAGGTGATTGATTGTCGCCCCTGTTGGCG GAAGTTCGGGGTCGAATCCCGGTGAAAACAAAATGGCGCTTTTCTGCGCC ACGTTCCGTCGCGGCAAGCGCGAGAGGGTGAGTAAGCAATATTCGATGAA GGTCGACGAGGGAAGAAAATGCTGCACCCTTCTCGCGATATAAATGTAGG CACGTACCGTAGTGGGGAGGGGGGAGGAGCGCCTGCTATGTGACGCCGGA TCTGAGTTACGAAGAGAGATTGAGCTGAATAATGATTAGGGCGAAGATAA TAAATGGGATGAAAACAAAAAAAAAAATGAGTAGGGGTGGCGCTGCGGTC TACAAAGGTTACGCCATCGCCCCTGATGGCGGAAGTTCGGG
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig998:4899..13889+

>mRNA_D-dudresnayi_contig998.28789.1 ID=mRNA_D-dudresnayi_contig998.28789.1|Name=mRNA_D-dudresnayi_contig998.28789.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at D-dudresnayi_contig998:4899..13889+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCTGTGGCCGACGCGACCCGATACCTGGCGCAAATCGGCGCGACCAGC
CCAAACAGCTTTTTCCGCGGTAGCCAACACCATCGGGCGATTCGAGCCGG
TAACCGTCGGAGCTCCTTCGGGCGAAGAAGATTCAGCTCGGGCGCTCCTA
AACGCTGAAAACGTGTCGGTCGTAACAATCGACCAGGACGATGCTTGGAT
GCGAGACACCGGACCGCTGTTTGTCGTTAACAAATCGAAATCGGATGAGC
AGGGGCAACGTCACGTACGTGGCGTGGACTGGTCGTTCAACGCGTGGGGG
GGAGCTCTGGGAGGATGTTTCTCTAATTGGAGTAAGGATGATGCTATCGC
GAGGACAGTGCTGGGTCTTGCGGACGCTGAGCGTTACAAGGCAGATATGA
TCCTCGAGATGCTGTGGCCGACGCGACCCGATACCTGGCGCAAATCGGCG
CGACCAGCCCAAACAGCTTTTTCCGCGGTAGCCAACACCATCGGGCGATT
CGAGCCGGTAACCGTCGGAGCTCCTTCGGGCGAAGAAGATTCAGCTCGGG
CGCTCCTAAACGCTGAAAACGTGTCGGTCGTAACAATCGACCAGGACGAT
GCTTGGATGCGAGACACCGGACCGCTGTTTGTCGTTAACAAATCGAAATC
GGATGAGCAGGGGCAACGTCACGTACGTGGCGTGGACTGGTCGTTCAACG
CGTGGGGGGGAGCTCTGGGAGGATGTTTCTCTAATTGGAGTAAGGATGAT
GCTATCGCGAGGACAGTGCTGGGTCTTGCGGACGCTGAGCGTTACAAGGC
AGATATGATCCTCGAGGGAGGGTCGGTGCATGTGGACGGCGAAGGGACCC
TCATCACCACGGAGGAATGCCTCCTCAACACAAATCGGGAGGGTCGGTGC
ATGTGGACGGCGAAGGGACCCTCATCACCACGGAGGAATGCCTCCTCAAC
ACAAATCGAAATCCAAGCCTCACAAGGGGGGACATCGAGACATTTCTGCG
GGATTACCTGGGCGTGGAATTGGTGCTTTGGCTGGGAAAAGGAGTTGTTG
GGGACACCGATACGGACGGACACGTTGACAACCTCGTCGCGTTTGTGCGA
CCTGGAGAGAAATCCAAGCCTCACAAGGGGGGACATCGAGACATTTCTGC
GGGATTACCTGGGCGTGGAATTGGTGCTTTGGCTGGGAAAAGGAGTTGTT
GGGGACACCGATACGGACGGACACGTTGACAACCTCGTCGCGTTTGTGCG
ACCTGGAGAGGTGGTTTTGCACTGGACGGACGACATTACCGACCCCCAGC
ACGCCGTCTCATCCGACGCTCTCCGAAGATTAGAGGGCTTTGTCGATGCT
AGGGGACGGCGTATAAAGGTGGTTTTGCACTGGACGGACGACATTACCGA
CCCCCAGCACGCCGTCTCATCCGACGCTCTCCGAAGATTAGAGGGCTTTG
TCGATGCTAGGGGACGGCGTATAAAGGTCCGCAAGTGCCCCCTTCCGGGC
CCTTTGTACATGTCGAAGGACGAGATGGAATCGATCGAGTCGACGCCGGG
CTCCCGAGAACGCGCGCATGGTCCGCAAGTGCCCCCTTCCGGGCCCTTTG
TACATGTCGAAGGACGAGATGGAATCGATCGAGTCGACGCCGGGCTCCCG
AGAACGCGCGCATGGAGACCGGTTGGCGGCCTCGTACGTGAACTTTTACT
TGGCGAATGGCGCTGTTGTTCTGCCGGGCTACGACGTGCCTGAGGACGAA
GCGGCGATACTTTTATTTAAGGAGACCGGTTGGCGGCCTCGTACGTGAAC
TTTTACTTGGCGAATGGCGCTGTTGTTCTGCCGGGCTACGACGTGCCTGA
GGACGAAGCGGCGATACTTTTATTTAAGACTATTTTTCCGGAGCGTTATG
TTGTCCAAGTCAGCACGCGGGAGGTAGCGCTTGGAGGAGGAAACATACAC
TGCATCACACAGCCGCAGCCCCTGGGTATCACGGGTGCCCCACCCATATG
AACTATTTTTCCGGAGCGTTATGTTGTCCAAGTCAGCACGCGGGAGGTAG
CGCTTGGAGGAGGAAACATACACTGCATCACACAGCCGCAGCCCCTGGGT
ATCACGGGTGCCCCACCCATATGA
back to top