mRNA_D-dudresnayi_contig998.28791.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig998.28791.1
Unique NamemRNA_D-dudresnayi_contig998.28791.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig998.28791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig998contigD-dudresnayi_contig998:18699..23200 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-02_001550.1
Exons4
Model size871
Cds size870
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig998.28791.1prot_D-dudresnayi_contig998.28791.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig998 18699..23200 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930961.2497303-CDS-D-dudresnayi_contig998:18698..189921622930961.2497303-CDS-D-dudresnayi_contig998:18698..18992Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 18699..18992 -
1690557981.0925636-CDS-D-dudresnayi_contig998:18698..189921690557981.0925636-CDS-D-dudresnayi_contig998:18698..18992Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 18699..18992 -
1622930961.364262-CDS-D-dudresnayi_contig998:19389..196651622930961.364262-CDS-D-dudresnayi_contig998:19389..19665Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 19390..19665 -
1690557981.1021626-CDS-D-dudresnayi_contig998:19389..196651690557981.1021626-CDS-D-dudresnayi_contig998:19389..19665Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 19390..19665 -
1622930961.3977892-CDS-D-dudresnayi_contig998:22527..226321622930961.3977892-CDS-D-dudresnayi_contig998:22527..22632Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 22528..22632 -
1690557981.1121767-CDS-D-dudresnayi_contig998:22527..226321690557981.1121767-CDS-D-dudresnayi_contig998:22527..22632Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 22528..22632 -
1622930961.418959-CDS-D-dudresnayi_contig998:23005..232001622930961.418959-CDS-D-dudresnayi_contig998:23005..23200Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 23006..23200 -
1690557981.1238456-CDS-D-dudresnayi_contig998:23005..232001690557981.1238456-CDS-D-dudresnayi_contig998:23005..23200Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig998 23006..23200 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig998.28791.1

>prot_D-dudresnayi_contig998.28791.1 ID=prot_D-dudresnayi_contig998.28791.1|Name=mRNA_D-dudresnayi_contig998.28791.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=290bp
DDSSCPSWSSSPAFRSSQPKRRKVRFPSEAENDKEWAMRDSPVKEGRKRR
PLRVLPIDGNVFVKKCKRTNPGEITTLWRRGAVNAIRGDGTYNVRYDDGE
VDHVIRRIDIVEDHGGDLPEGLLELLEKRRSCDGRDGEVRDTHPRRKKFR
RLSLVGESASPHSPHSSASSDKRLGSTANTASSHAKEQQRTLRPTLPSMD
NHGGEGEGTPSSAFGSHGGRESTSAWATRRNSKRKVLEEDESEPDVAQSL
VSSPSVMMESSSESQDTSLKDTDQEQAGEGACGTVEGSHG
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mRNA from alignment at D-dudresnayi_contig998:18699..23200-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig998.28791.1 ID=mRNA_D-dudresnayi_contig998.28791.1|Name=mRNA_D-dudresnayi_contig998.28791.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4502bp|location=Sequence derived from alignment at D-dudresnayi_contig998:18699..23200- (Desmarestia dudresnayi DdudBR16 monoicous)
GACGATTCTTCTTGCCCCTCTTGGTCATCTTCCCCCGCATTCCGGAGCTC
TCAACCCAAGCGGCGGAAGGTGCGATTTCCGTCGGAAGCCGAGAACGACA
AGGAGTGGGCGATGAGGGACAGCCCTGTCAAGGAGGGAAGGAAGCGGAGA
CCGCTGAGGGTCCTTCCAATAGACGGGAACGTTTTTGTCAAAAAGGTGAG
TACGGAAGTGTCACTCGTTGGCGACCTCAAATTGAATCAATAGCCTATCC
GGCGTAACGTGTCAGACGTTGTCTAAGTACCACTATAACCCAGGTATGTA
TTATATGGATGTTTGTGTGGAACGACGGGAGGAGTTTCTAATATTTTGCG
TTTCTTCCGCTCCGTATCTGTAGAGTGATCACAAACTCTAATCTTCAGAA
TTGTAGCACACCTAGTACATGCGGAGCGGGGGAACGACAAAACAAGTAGC
ACTTGCCATATTCAATGACCAGGTCCTTTAAAAGTGTTGCTAGCGTTGCT
TCTTCTCGGGCAACTCGTCTTCCAGGTAAATAATCCCGCTGTGGTGTTCG
GTTTTCTCCGCTGAACAGTGTAAAAGAACAAATCCTGGCGAGATTACCAC
TCTGTGGCGACGTGGGGCTGTTAACGCGATTCGCGGAGATGGAACGTACA
ATGTGCGCTACGATGACGGCGAGGTGACATTATGCTTAGTTTGTGAAATA
CATGTTCGTATACACCCAGAATGGGTATGCCCGAGGTGCCTCGTAAATCA
AGGAATCATGTTAACAACGTAGATTAGCTCACAAAACATCGAGAAAGGAA
AGAGGAGAAAGAGAGAGTGGCCTCCACCAGGACACCTAGCACACAAATAC
ACCGCTCGCTCAATAGTACGCGGCGCAGTCGCCCCGCGATCTTATTGGCC
AGAATACAAACACGCCAAATACAAATTCAAGTACGTACGAGAACGGACAC
CCTCCCTGGTCCTTCCGCAAGTTACTAGCCATTATACGGATCTCGTACGA
ACAATCTCCCTAGTTTTTCATGCAAATCACCTGCCAGCACACAGGATAGA
AATACCCCCGCCTCTGAATCAAAAACCCCTTTCACAATAAAAAAATAAAA
AAGACATCAGCAAGGATCCCAACGGTTTCACTTCAAAGACAAGATCAAGA
CAAGACAATTAATATCAGACACGCGTGTTACACTCCCTAAGCCACCGCCG
TGGGTGATGCGCTGACACATCGTTCCTGCGTGACTAAGTAAAACCCCTGT
CCACTGCCCAACCATACTGCATTTACTGTTTGAAGTATTACCAGACGGCG
CTGATAACTGGTCCAATCATTAAACGCCTGCTGTTGTACCTGCTGTCTGC
ATCACAAACAGACGCCGATAGTCCGAGCCCTCCCTGCTCAACAACACTCT
ACAACAGGAATATAGATAGTATCCACCTATTATTCTCCGAAAAGAGAAAA
CGTTCGAAAACTGTATGTGAAACACATTAGCGACACGATCTTATCCTTAC
AATATTCCATATTTATTTCTCAGACACCAACAACTAGACTGCAACTCTCC
TTCCGTGCCGGCATGATCGCAAATCTCCTTCTAAAGTGGTGGTAGAATAT
CGCAAACACGTATGTTTACCCCCCCCCCCCACTATTCTGCGACCAATCAT
AAAAGGAAGGGTCATATACCACTAGCATTAAAATGCGCACACCTGTTGTG
CGTTCTCCCAACAAGAACATGCACGCCTATCACTGTGTGCTCCCATCAAG
GTGGACACGCCATTTTACTGCGCCTCCCCCCTATATAATAGAAACGCCTG
GAACTGCGAATCTCCTACAACTGGACACGCCTGTTAACCGCGCACCCCCA
AGAGGATAAACGCACCTGTTACTGCGCGCCTCCCCCTTACAAAGATAATG
GAAATACCCCCAACTGTGTATCCCCAACAACTGGACGCGCCTGTTAACCG
CGCACCCCCAAGAAAACAAACGCACCTGTTACTGCGCGCCCCCAGAAATG
AACGCACCTGCTACTGTGCGCCCCCAAAAAGGAATGGGAACACCTTTAAC
TGTGAACCCCCAGACAATTGACTGATTTCGGTTTATCCATCGGAAGACAA
ACATATTTACTGTTTTTTCCTACGAATACCAACCAGATAAAACAGATGCA
AGAAAAACACAGTACAGTACTCATGCAACTGTGAACCCCCAGACAACTGA
CTGATTTCGGTTTATCCATCGCAAGACAAGCACATTACTCGTTTTTCCTA
TGAGTACCAACCAGAAAAACATATGCAAGAAAAACACTGTACAGTACTCA
TTTTACACAACACAGTATAGACACAACTGTACAGTCACTACTGTACTCAT
TTTCCCTACGAACACCAGCCTGGGAGGAGCGCCCGCGGTAGCGCCACGCA
TCTTGTCGTTCCTACTCCCCCCATTACAACGCCTCTGCTTCCACGGCTAG
CTTATCCTCTTCGGTGAGCTGCTCCATCTCCGCGGACACCATCTCGAACG
CCAGGATCCCTTCCTCCCATGTGCAGTCTTTCTTTGTGTGACCAAGCCCC
CGAGCAGTTGCCGCACTTAGGAAATAAATCGGCCTCCTTCGTGGCGCACT
CGTTCTTCACATGTCCCTTGCGGTTGCACCGATAGCACCGCCGGCTGTCT
CCTCCGCCGCCACTGGTTGCTAGTTGAAGTTAAAAAAACAGAGTTGCTCT
ACCACTATCGGAACCGCTCCCCGCATCCTTCTGGCCGCTGTGTCCACGGT
TGCGGCCCTGACTGCCACGGGCCGTGGTTAGTCTGCCACCTGTTTCCCCC
GTTGCGCCGACTTGAGCAGGTAGCTGCTCCTCTTGGTGGCCCGGGATACT
GATCCTCCCAGCTCCATCGCGTGACACCCCGTTCCGTGTGTCCTGGGCGT
TTCCGCCCCCTACGGCACTCCTCCGAGTGCCACCTGACTCCCCTTGGTCT
CCGCCATCCGACTTGACCTGCAGCAGCGTAGCCGTAAACATACTAAACAA
CTACTATTACTGCTGCATCGTCGTCTGCATCCTCTCCCGCTGCTCATCCA
GCCATGATCACAAAGCGGGCTCCTTCGAAGGAGAACACTAGTGTGTTCGT
ATACACCCAGAATGGGTATGCCCGATGTGCCTCGTAAATCAAGGAATCAT
GATACCAACGTAGATTAGCTCACAAAGTATCGAGAAAGGAAAGAGGAGAA
AAAGAGAGTGGCCTCCACCAGGACACCCAGCACACCAATACACCGCTCGC
TCTATAGAACGCGGCGCAATCGCCCTGCGATCTTTTTGGCCAGAATACAA
ACACGCCAAATACAAATTCACGTACGTACGAGAACGAACAGTACACACCA
TGGGTCTTGGTTGAAATCACTGCTACGTCTGCAGGCGTAGTTATTTTACG
TCGCACGGTAAAATACAGTCGCAGTGAGAGGTAAATACTTGTATTTTGTT
TCGTGGCGACGACGCAACGCCACGTTTGCTGGGACCCCTGCTGCAGCCCT
GACGCGCACGCACTACTGCGTATATTTGCAAGCAGGTAGACCACGTGATT
CGACGCATCGACATAGTCGAGGACCATGGGGGCGACTTGCCTGAGGGACT
GCTCGAGTTGCTGGAGAAAAGGCGAAGTTGCGATGGCCGTGATGGTGAAG
TTAGAGACACACACCCGCGCCGAAAGAAATTCCGTAGACTGTCTCTAGTG
GGCGAGTCAGCATCTCCTCATTCGCCACACTCGTCAGCATCGTCAGACAA
GAGGCTTGGTTCGACCGCAAACACAGCATCGTCGCATGCGAAAGAGCAAC
AACGAACGTTGGTAAGGCCTGCATCGTGGTGTTCTTCCGTGTGAGAGGAT
GGCATGCTGACTGAGACAGTTATGGGTGTGTCTTGGCAATTGCCCAACCC
ATAGGAGACCGAGACAAAGGCAAGGTTTGCACGGCAAGTACGATTGCAAG
GCTCCTTGTTTGGGGATGAAAAACTTGCGACGGGCTGTCCCATCCTGTTC
GGGTGCAGGGTACGTGTGCTGATTCCCTTCTCTCGTAGTTCCATGCAGAC
AAATCCATGGTGACAACTATTGAATGAAAAACGTGGGCGCCCGCTTCCCC
CCTTGCCACAAACAAGGCCTCATTCGGCGTACGCTTTGTCAATGCTGACC
AACATCTTCCCTCTCAGTCATTCTATCCTATTCTGTTTTTCGGATTCGTT
TTGCGCAGCGCCCTACACTCCCCAGTATGGACAACCACGGGGGTGAAGGT
GAAGGCACTCCATCGAGCGCGTTTGGTAGCCACGGGGGAAGGGAGAGCAC
TAGCGCATGGGCGACGCGACGGAATTCAAAGCGCAAAGTGCTCGAGGAAG
ACGAGTCCGAGCCGGACGTCGCTCAATCTCTCGTGTCGTCCCCTTCCGTC
ATGATGGAGTCCTCCAGTGAAAGCCAGGACACGTCGCTGAAAGATACCGA
CCAAGAACAAGCTGGCGAGGGGGCGTGTGGCACAGTAGAGGGTTCACACG
GC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig998:18699..23200-

>mRNA_D-dudresnayi_contig998.28791.1 ID=mRNA_D-dudresnayi_contig998.28791.1|Name=mRNA_D-dudresnayi_contig998.28791.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at D-dudresnayi_contig998:18699..23200- (Desmarestia dudresnayi DdudBR16 monoicous)
GACGATTCTTCTTGCCCCTCTTGGTCATCTTCCCCCGCATTCCGGAGCTC
TCAACCCAAGCGGCGGAAGGTGCGATTTCCGTCGGAAGCCGAGAACGACA
AGGAGTGGGCGATGAGGGACAGCCCTGTCAAGGAGGGAAGGAAGCGGAGA
CCGCTGAGGGTCCTTCCAATAGACGGGAACGTTTTTGTCAAAAAGGACGA
TTCTTCTTGCCCCTCTTGGTCATCTTCCCCCGCATTCCGGAGCTCTCAAC
CCAAGCGGCGGAAGGTGCGATTTCCGTCGGAAGCCGAGAACGACAAGGAG
TGGGCGATGAGGGACAGCCCTGTCAAGGAGGGAAGGAAGCGGAGACCGCT
GAGGGTCCTTCCAATAGACGGGAACGTTTTTGTCAAAAAGTGTAAAAGAA
CAAATCCTGGCGAGATTACCACTCTGTGGCGACGTGGGGCTGTTAACGCG
ATTCGCGGAGATGGAACGTACAATGTGCGCTACGATGACGGCGAGTGTAA
AAGAACAAATCCTGGCGAGATTACCACTCTGTGGCGACGTGGGGCTGTTA
ACGCGATTCGCGGAGATGGAACGTACAATGTGCGCTACGATGACGGCGAG
GTAGACCACGTGATTCGACGCATCGACATAGTCGAGGACCATGGGGGCGA
CTTGCCTGAGGGACTGCTCGAGTTGCTGGAGAAAAGGCGAAGTTGCGATG
GCCGTGATGGTGAAGTTAGAGACACACACCCGCGCCGAAAGAAATTCCGT
AGACTGTCTCTAGTGGGCGAGTCAGCATCTCCTCATTCGCCACACTCGTC
AGCATCGTCAGACAAGAGGCTTGGTTCGACCGCAAACACAGCATCGTCGC
ATGCGAAAGAGCAACAACGAACGTTGGTAGACCACGTGATTCGACGCATC
GACATAGTCGAGGACCATGGGGGCGACTTGCCTGAGGGACTGCTCGAGTT
GCTGGAGAAAAGGCGAAGTTGCGATGGCCGTGATGGTGAAGTTAGAGACA
CACACCCGCGCCGAAAGAAATTCCGTAGACTGTCTCTAGTGGGCGAGTCA
GCATCTCCTCATTCGCCACACTCGTCAGCATCGTCAGACAAGAGGCTTGG
TTCGACCGCAAACACAGCATCGTCGCATGCGAAAGAGCAACAACGAACGT
TGCGCCCTACACTCCCCAGTATGGACAACCACGGGGGTGAAGGTGAAGGC
ACTCCATCGAGCGCGTTTGGTAGCCACGGGGGAAGGGAGAGCACTAGCGC
ATGGGCGACGCGACGGAATTCAAAGCGCAAAGTGCTCGAGGAAGACGAGT
CCGAGCCGGACGTCGCTCAATCTCTCGTGTCGTCCCCTTCCGTCATGATG
GAGTCCTCCAGTGAAAGCCAGGACACGTCGCTGAAAGATACCGACCAAGA
ACAAGCTGGCGAGGGGGCGTGTGGCACAGTAGAGGGTTCACACGGCCGCC
CTACACTCCCCAGTATGGACAACCACGGGGGTGAAGGTGAAGGCACTCCA
TCGAGCGCGTTTGGTAGCCACGGGGGAAGGGAGAGCACTAGCGCATGGGC
GACGCGACGGAATTCAAAGCGCAAAGTGCTCGAGGAAGACGAGTCCGAGC
CGGACGTCGCTCAATCTCTCGTGTCGTCCCCTTCCGTCATGATGGAGTCC
TCCAGTGAAAGCCAGGACACGTCGCTGAAAGATACCGACCAAGAACAAGC
TGGCGAGGGGGCGTGTGGCACAGTAGAGGGTTCACACGGC
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