prot_D-dudresnayi_contig9968.28773.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9968.28773.1
Unique Nameprot_D-dudresnayi_contig9968.28773.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length56
Homology
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BLAST of mRNA_D-dudresnayi_contig9968.28773.1 vs. uniprot
Match: D8LBN4_ECTSI (V-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN4_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.830e-22
Identity = 49/54 (90.74%), Postives = 53/54 (98.15%), Query Frame = 0 
Query:    2 HAAVSEARDLAIERGEKLDNLVDKSRQLEDSAMAFGDMAKQLRRQQEDESCCIS 55
            HAA SEARDLAIERGEKL+NLVD+SRQLEDSAMAFGDMAKQLR+QQEDE+CCIS
Sbjct: 1416 HAAASEARDLAIERGEKLENLVDRSRQLEDSAMAFGDMAKQLRKQQEDEACCIS 1469
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BLAST of mRNA_D-dudresnayi_contig9968.28773.1 vs. uniprot
Match: A0A7K7KTK9_9AVES (VAMP4 protein (Fragment) n=1 Tax=Asarcornis scutulata TaxID=75869 RepID=A0A7K7KTK9_9AVES)

HSP 1 Score: 45.4 bits (106), Expect = 6.960e-5
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0 
Query:   13 IERGEKLDNLVDKSRQLEDSAMAFGDMAKQLRRQQEDESCCIS 55
            IERGE+LD+L DKS  L D+A AF + AKQLRRQ     C +S
Sbjct:   20 IERGERLDDLQDKSESLSDNATAFSNRAKQLRRQMWWRGCKVS 62
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9968.28773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBN4_ECTSI3.830e-2290.74V-SNARE coiled-coil homology domain-containing pro... [more]
A0A7K7KTK9_9AVES6.960e-558.14VAMP4 protein (Fragment) n=1 Tax=Asarcornis scutul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 1..47
e-value: 2.5E-12
score: 48.6
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 5..46
IPR001388SynaptobrevinPFAMPF00957Synaptobrevincoord: 9..47
e-value: 9.1E-9
score: 35.0
IPR001388SynaptobrevinPROSITEPS50892V_SNAREcoord: 1..50
score: 10.733

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9968contigD-dudresnayi_contig9968:783..950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9968.28773.1mRNA_D-dudresnayi_contig9968.28773.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9968 763..1322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9968.28773.1 ID=prot_D-dudresnayi_contig9968.28773.1|Name=mRNA_D-dudresnayi_contig9968.28773.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=56bp
MHAAVSEARDLAIERGEKLDNLVDKSRQLEDSAMAFGDMAKQLRRQQEDE
SCCIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001388Synaptobrevin