mRNA_D-dudresnayi_contig9890.28704.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 199 bits (505), Expect = 4.530e-51 Identity = 137/348 (39.37%), Postives = 178/348 (51.15%), Query Frame = 1 Query: 1120 LLSPALSPQTVQPPQRAAGWSLESVPKEDEDELGNSWNMIMDTTEVDDFFR-SAEAGEAGSSDLNAPAGLGVEADVGAGGAHGATRLGSKC---------------SQHSSGSS----------MEDVVIELSRKECDFAGHAVPVDSAIRSGPVATVSAEYRCLLVFTGLERTGHDLRKLAVTAHFGVDTGHKTARAASPIQVGANGKFFAEVSYPSMQELWPELHRLTNVRVIEVDVMVEIRSAGGEFHYAASKLKVTYIRSPAPTDQGKKKSGTSSCRRFEPRTGKHQGQRVGEDSPHVTYSAIDSRSCCTDWFT-VFRSVFGTASTAHEPLGDDEFDDDLMSVD 2082 LL P PQ+VQPP R GWS +S D G + ++D ++VD FR SA GEA S+ QH + S ME VVIE SR ECDF G P P S + +C LVFTGL TG DLR L VTAHFGVD+ HK + SPIQ+G+NG+ +A V YPSMQE+WPEL+ +N+RV+EVD++VEIRS GE+ Y +LKVTY+R+ P D + ++ R RT D V+YS +D C DWF+ + +SVF + +TAH+PL DD +DLM+VD Sbjct: 253 LLGPMPPPQSVQPPLR--GWSFDSAQVADS---GAGGSAVVDLSDVDGLFRGSAADGEAVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQHEAMSDAKWANDGHLPMEKVVIEPSRNECDFEGRPTPPTDPKSGEPPIPSSTDRQCHLVFTGLNNTGQDLRSLRVTAHFGVDSVHKVGKVTSPIQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKVTYLRAAPPAD-----AAEATPRPAGRRTASRAPIPFNSDGHQVSYSCVDYS--CGDWFSDMCQSVFRSGATAHQPLHDDP--NDLMNVD 586
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: D7G7N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N5_ECTSI) HSP 1 Score: 134 bits (338), Expect = 7.400e-31 Identity = 72/150 (48.00%), Postives = 98/150 (65.33%), Query Frame = 1 Query: 1414 MEDVVIELSRKECDFAGHAVP-VDSAIRSGPVATVSAEYR-CLLVFTGLERTGHDLRKLAVTAHFGVDTGHKTARAASPIQVGANGKFFAEVSYPSMQELWPELHRLTNVRVIEVDVMVEIRS-AGGEFHYAASKLKVTYIRSPAPTDQG 1854 M DVV+E+SRKECD G + + +++ P+ S + R + FTGLE+TGHDLR L VTA FGVD H+ A SPI+VG +G+ ++ V YP MQE+WPEL+ +N+R++EVDV +EI S GEF + LKV Y R+ P D G Sbjct: 104 MGDVVVEVSRKECDLEGRPITRIGNSLT--PITASSPDVRESHIEFTGLEKTGHDLRGLRVTAIFGVDAVHQIACVTSPIEVGPDGRAYSRVFYPGMQEIWPELYNTSNIRLVEVDVAIEILSDTCGEFRFVGPHLKVAYRRAIPPVDDG 251
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: A0A6H5JMY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY9_9PHAE) HSP 1 Score: 109 bits (273), Expect = 2.470e-23 Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 1414 MEDVVIELSRKECDFAGHAVP-VDSAIRSGPVATVSAEYR-CLLVFTGLERTGHDLRKLAVTAHFGVDTGHKTARAASPIQVGANGKFFAEVSYPSMQELWPELHRLTNVRVIE 1749 M DVV+E+SRKECD G + + +++ P+ S + R L+ FTGLE+TGHDLR L VTA FGVD H+ A SPI+VG +G+ + V YP MQE+WPEL+ +N+R++E Sbjct: 108 MGDVVVEVSRKECDLEGRPIARIGNSLT--PITASSTDVRESLIEFTGLEKTGHDLRGLCVTAIFGVDAVHQIACVTSPIEVGPSGRACSRVFYPGMQEIWPELYNTSNIRLVE 219
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.780e-18 Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 1537 LVFTGLERTGHDLRKLAVTAHFGVDTGHKTARAASPIQVGANGKFFAEVSYPSMQELWPELHRLTNVRVIEVDVMVEIRSAGGEFHYAASKLKVTYIRSP 1836 LVF GL TG L LA A F + G K R P+Q G+NG+ + V YPSM ELWPE++ T +RV++VD++VE+RS G+ Y A++LK Y R P Sbjct: 241 LVFIGLGETGRPLPTLAARAQFSANPGRKAERMVGPLQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELKAMYRRPP 340
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 4.930e-17 Identity = 55/152 (36.18%), Postives = 85/152 (55.92%), Query Frame = 1 Query: 1390 SQHSSGSSMEDVVIELSRKECDFAGHAVPVDSAIRSGPVATVS---AEYRCLLVFTGLERTGHDLRKLAVTAHFGVDTGHKTARAASPIQV--GANGKFFAEVSYPSMQELWPELHRLTNVRVIEVDVMVEIRSAGGEFHYAASKLKVTYIR 1830 S+ +S ++++V IE R++ DF G + + S A +S ++ LVF GL TG L LA A F + G + R P+Q G+NG+ + V YPSM ELWPE++ +RV++VD++VE+RS G+ Y A++L Y R Sbjct: 271 SRRASKPTVDNVFIESLREDFDFEGRTIEPNKPSGSPFAAALSVPRSDDEQYLVFIGLGETGRPLPALAARAQFSANPGRQAERMVGPLQARAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATELMAMYRR 422
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: A0A6H5K0L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L1_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 1.580e-14 Identity = 56/157 (35.67%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 1405 GSSMEDVVIELSRKECDFAGH---AVPVDSAIRS---GPVATVSAEYRCLLVFTGLERTGHDLRKLAVTAHFGVDT-GHKTARAASPIQVGAN---GKFFAEVSYPSMQELWPELHRLTNVRVIEVDVMVEIRSAGGEFHYAASKLKVTYIRSPAPT 1845 GS +V L R+ECDF G AVP SA + G A+ S + C L F G+E + +R LAVTA F V G+ A + ++ N G ++YPSM+++WPE++ +V+V+EVD+ V++RS+ G++ ++ +KV Y R+ T Sbjct: 422 GSQEGNVAFGLLRQECDFDGRSAAAVPAASATSASANGVCASSSTKKPCRLRFKGIEGVDYGIRDLAVTAQFSVGPPGNLVGTAPTNLEADRNACAGSSSCTITYPSMEDIWPEVYSARSVKVVEVDMTVDVRSSDGKWVHSWPSVKVMYRRARTAT 578
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: D8LCK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK7_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 3.660e-11 Identity = 47/128 (36.72%), Postives = 66/128 (51.56%), Query Frame = 1 Query: 1516 SAEYRCLLVFTGLERTGHDLRKLAVTAHFGVDTGHKTARAAS-PIQV-----------------GANGKFFAEVSYPSMQELWPELHRLTNVRVIEVDVMVEIRSAGGEFHYAASKLKVTYIRSPAPT 1845 S RC F GLE ++R V A F VD + R AS P+ G G+ A V +PS+ E+WPE++++ N+RV+EVD++VE+RS+ G Y LK+TY RS A T Sbjct: 504 SLNNRCRFAFLGLES---EIRDFTVCARFSVDPASRVERFASLPLDGAAGXXXXXXXDPAGAVGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSDGNILYTGPTLKITYRRSAART 628
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: A0A6H5JYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP1_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 8.740e-10 Identity = 55/166 (33.13%), Postives = 77/166 (46.39%), Query Frame = 1 Query: 1435 LSRKECDFAGHAVPVDSAIRSG------------PVATVSA----------EYRCLLVFTGLERTGHDLRKLAVTAHFGVDTGHKTARAAS--------------PIQV--GANGKFFAEVSYPSMQELWPELHRLTNVRVIEVDVMVEIRSAGGEFHYAASKLKV 1818 L+ +ECDF G+ S G P A V+A RC L F GLE +LR + V A F VD + R AS P V G G+ A V +PS+ E+WPE++++ N+RV+EVD++VE+RS+ G Y LK+ Sbjct: 594 LTIQECDFDGNCAATPSKPPRGLPPTAATSFFPDPSAAVAACTSRPSSNYLNNRCRLAFLGLES---ELRDVTVCARFSVDPASRVERFASLPLDGAAGXXXXXDPAGVVGGRRGRADAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLKL 756
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Match: D7G8W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W7_ECTSI) HSP 1 Score: 65.9 bits (159), Expect = 7.740e-9 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 1648 QVGANGKFFAEVSYPSMQELWPELHRLTNVRVIEVDVMVEIRSAGGEFHYAASKLKVTYIRSPAPTDQG 1854 + G NG+ + V PSM++LWPE++ VRV++VD+ VEIRS G+F + S+LKV Y R P D G Sbjct: 86 EAGPNGRVYGGVQCPSMKDLWPEVYSAAAVRVVQVDLRVEIRSRSGDFLHLDSELKVIYRR---PQDHG 151 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9890.28704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9890.28704.1 >prot_D-dudresnayi_contig9890.28704.1 ID=prot_D-dudresnayi_contig9890.28704.1|Name=mRNA_D-dudresnayi_contig9890.28704.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=524bp MDMDEEADNVIGDGLSPQPAPALSILLPADPSQSTQMPITVLGDDGERSTback to top mRNA from alignment at D-dudresnayi_contig9890:6889..11328+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9890.28704.1 ID=mRNA_D-dudresnayi_contig9890.28704.1|Name=mRNA_D-dudresnayi_contig9890.28704.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4440bp|location=Sequence derived from alignment at D-dudresnayi_contig9890:6889..11328+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9890:6889..11328+ >mRNA_D-dudresnayi_contig9890.28704.1 ID=mRNA_D-dudresnayi_contig9890.28704.1|Name=mRNA_D-dudresnayi_contig9890.28704.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3144bp|location=Sequence derived from alignment at D-dudresnayi_contig9890:6889..11328+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |