mRNA_D-dudresnayi_contig9763.28561.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9763.28561.1
Unique NamemRNA_D-dudresnayi_contig9763.28561.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9763.28561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9763contigD-dudresnayi_contig9763:2177..4464 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1042
Cds size1038
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930932.31497-CDS-D-dudresnayi_contig9763:2176..22741622930932.31497-CDS-D-dudresnayi_contig9763:2176..2274Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9763 2177..2274 +
1690557970.1397564-CDS-D-dudresnayi_contig9763:2176..22741690557970.1397564-CDS-D-dudresnayi_contig9763:2176..2274Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9763 2177..2274 +
1622930932.3288321-CDS-D-dudresnayi_contig9763:3522..44621622930932.3288321-CDS-D-dudresnayi_contig9763:3522..4462Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9763 3523..4462 +
1690557970.147917-CDS-D-dudresnayi_contig9763:3522..44621690557970.147917-CDS-D-dudresnayi_contig9763:3522..4462Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9763 3523..4462 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9763.28561.1prot_D-dudresnayi_contig9763.28561.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9763 2177..4462 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9763.28561.1

>prot_D-dudresnayi_contig9763.28561.1 ID=prot_D-dudresnayi_contig9763.28561.1|Name=mRNA_D-dudresnayi_contig9763.28561.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=346bp
AIEELENNEAYMSMGMNPRKRFSCEAGVYNLRRWVSDQELRSMNASSCVK
HPTTAEAKALGLPGHPEGGDGIETESRDVGGKRSFDVSSSVMGFLNSTCR
GFGSVSNLPAVADGNHDSDPVGVTVDRNAMPNIGQFGANTLGSCVDVQTT
CLHDASRGGDTPGSSVSTPGPVNNAPARGQGRFGFNQFGTCVGTQSSNQD
GSSSSATSTSMSDGTHSRSSATWRNNVGYPAHDSMGSRYGSSRVVVEQRR
NKRDRRGYENGQSILGGSTTSGSTMSRLRSYGDGSTCSSSSWNPSRNSSQ
WDGSATSGKYNNFGFPSVPREKCPEGGLYGGVPRSYSSRDRIHFAI
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mRNA from alignment at D-dudresnayi_contig9763:2177..4464+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9763.28561.1 ID=mRNA_D-dudresnayi_contig9763.28561.1|Name=mRNA_D-dudresnayi_contig9763.28561.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2288bp|location=Sequence derived from alignment at D-dudresnayi_contig9763:2177..4464+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCAATTGAGGAGTTGGAAAATAATGAGGCTTACATGTCGATGGGGATGAA
TCCGCGGAAGCGCTTCTCGTGCGAAGCAGGCGTTTACAATCTGCGCAGGT
GCGTCGAGTTTGACGTGTGTGTTGTCCTACACACTTGATACGTTTATCCC
TACTCTACTAACGGTAGTGCCTTCTCCCCGCTGTTCCAACGATGTCGTCT
CGATTCCATGGTATATGCCACGGAAACATGTACCATGAAATATGGCACGA
AATACTTGACGGCATAGGGTTAGGGTTAGGGCTAGGGTTTGGCCTAGGGT
TCGGGTTAGTTCATGCCATGGCATATTTCACGGGGTGATACACAAAACAA
ACATGCCATGGCATATGCAACGGCATGTCATGAAAAAGACAAATATTGTG
CAAGGCCCCGTCGCTTGGGCTACGCCTCTCGTGTCTCTGTTGCGCTGATC
TAAACGATATATTGCAGGTAAAATTTTATGTACTCTTACCCAGTTCTTTC
TGGCGTCCGATGTATTATCCTATCGACTTTCTTGGTCTTTCGCGTTTCGG
TTGACTCCTTTCGATTGTGTGCGTAGCTCTTTACGTCTTCCCGTAGCAGT
GCGATTTCTCTTCTATAAACGCTTTCGCGTTTAATCTGCATCCTTCGGCG
GATGGGTAATTATATTGCTTCAGCTCCTAACCCTCCACAGCTGTGATAGT
TGTGTTTGCCGATATAAAACTGTTGAAGAACACATTCCCATTACAGCGCG
GGTACATCAGACGCCCCTTCTGATCCCATTGGAGTACCAGAATCTGGAGG
CAACCACCACGAGAAATAAATCTCCCCCGATAGTGTGTTGGGGCTTGCCC
AAGCTCACCCACTAACACGCCCAAGACTGTGCCACTTTTCCCGCCGGACT
CGGTCCAGTTACGGTCCTCGCTACCCGTTCGGGTCGTTGGTCGCGAGAAT
CACCTATTCCTGCCCTGAGCCATGCTACGGTAGGGGGGGTACATTTGGGC
CCTAAATTGCTCTGGCTGATGGGGCGCTTCAACTGGGGAACTACCCTATA
TGTTTGAAATTACGTGCGTGATGTACCTTTTTATTGGAAATATACGTAGC
CGATGGGAATTTTTATCGGCTTGCGCGTACTTATTTTGTCCAAGGCGGGT
TTTGGTTGAGATATTGAGCTCTTCAAGTGAGGAGCCTCAGAAAATTTGGG
TATCCCCCCTACAGTAGCATGCCTCCCCTAGCTCTCTACCATGAATGCTC
AACAACATGTACATATATAAATATATGTATGCACTACGCCCCCGCCTTGT
TTCTCCACCGCACGTACTGCGCCCCGTTTCGCCCCACGATATAAAGATGG
GTAAGTGACCAGGAGTTGCGGTCGATGAACGCCTCCTCGTGTGTCAAGCA
CCCCACTACGGCCGAGGCGAAGGCCTTGGGACTTCCGGGTCACCCAGAAG
GAGGGGACGGGATAGAGACGGAAAGTCGCGATGTTGGCGGCAAGCGGAGT
TTCGACGTTTCTAGTTCTGTGATGGGGTTCCTTAACAGTACTTGTAGAGG
GTTTGGGTCTGTCAGCAACCTTCCCGCCGTGGCTGACGGAAATCACGATA
GCGACCCCGTTGGTGTCACCGTGGACAGGAACGCCATGCCTAACATAGGA
CAATTTGGCGCGAATACACTTGGATCTTGCGTCGATGTGCAAACCACCTG
CCTACACGATGCCTCTCGGGGAGGTGATACACCCGGGAGTAGCGTCAGCA
CTCCAGGCCCAGTGAACAACGCCCCTGCACGTGGGCAGGGCAGGTTTGGC
TTCAACCAGTTTGGTACTTGTGTCGGTACCCAAAGCAGCAACCAAGATGG
CAGCAGCAGCAGTGCCACATCGACTTCGATGAGTGACGGAACCCACAGCA
GAAGCAGCGCGACGTGGCGGAACAATGTTGGATACCCCGCTCACGATAGC
ATGGGCTCGCGTTATGGGTCGAGCAGGGTAGTAGTAGAACAGCGACGAAA
CAAACGCGATCGCAGGGGCTATGAAAACGGTCAGTCAATCCTAGGAGGAA
GCACGACTAGCGGTTCCACGATGAGCCGCCTGCGAAGCTACGGAGATGGA
AGCACTTGCTCTAGCAGCTCTTGGAACCCTAGCCGGAACAGCAGCCAGTG
GGACGGAAGCGCGACGAGCGGAAAATACAACAACTTCGGGTTTCCTTCAG
TCCCCAGAGAAAAATGTCCAGAGGGGGGACTGTACGGCGGCGTACCGCGA
TCGTACTCTAGCCGCGACCGCATCCACTTCGCTATCGC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9763:2177..4464+

>mRNA_D-dudresnayi_contig9763.28561.1 ID=mRNA_D-dudresnayi_contig9763.28561.1|Name=mRNA_D-dudresnayi_contig9763.28561.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2076bp|location=Sequence derived from alignment at D-dudresnayi_contig9763:2177..4464+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCAATTGAGGAGTTGGAAAATAATGAGGCTTACATGTCGATGGGGATGAA
TCCGCGGAAGCGCTTCTCGTGCGAAGCAGGCGTTTACAATCTGCGCAGGC
AATTGAGGAGTTGGAAAATAATGAGGCTTACATGTCGATGGGGATGAATC
CGCGGAAGCGCTTCTCGTGCGAAGCAGGCGTTTACAATCTGCGCAGATGG
GTAAGTGACCAGGAGTTGCGGTCGATGAACGCCTCCTCGTGTGTCAAGCA
CCCCACTACGGCCGAGGCGAAGGCCTTGGGACTTCCGGGTCACCCAGAAG
GAGGGGACGGGATAGAGACGGAAAGTCGCGATGTTGGCGGCAAGCGGAGT
TTCGACGTTTCTAGTTCTGTGATGGGGTTCCTTAACAGTACTTGTAGAGG
GTTTGGGTCTGTCAGCAACCTTCCCGCCGTGGCTGACGGAAATCACGATA
GCGACCCCGTTGGTGTCACCGTGGACAGGAACGCCATGCCTAACATAGGA
CAATTTGGCGCGAATACACTTGGATCTTGCGTCGATGTGCAAACCACCTG
CCTACACGATGCCTCTCGGGGAGGTGATACACCCGGGAGTAGCGTCAGCA
CTCCAGGCCCAGTGAACAACGCCCCTGCACGTGGGCAGGGCAGGTTTGGC
TTCAACCAGTTTGGTACTTGTGTCGGTACCCAAAGCAGCAACCAAGATGG
CAGCAGCAGCAGTGCCACATCGACTTCGATGAGTGACGGAACCCACAGCA
GAAGCAGCGCGACGTGGCGGAACAATGTTGGATACCCCGCTCACGATAGC
ATGGGCTCGCGTTATGGGTCGAGCAGGGTAGTAGTAGAACAGCGACGAAA
CAAACGCGATCGCAGGGGCTATGAAAACGGTCAGTCAATCCTAGGAGGAA
GCACGACTAGCGGTTCCACGATGAGCCGCCTGCGAAGCTACGGAGATGGA
AGCACTTGCTCTAGCAGCTCTTGGAACCCTAGCCGGAACAGCAGCCAGTG
GGACGGAAGCGCGACGAGCGGAAAATACAACAACTTCGGGTTTCCTTCAG
TCCCCAGAGAAAAATGTCCAGAGGGGGGACTGTACGGCGGCGTACCGCGA
TCGTACTCTAGCCGCGACCGCATCCACTTCGCTATCATGGGTAAGTGACC
AGGAGTTGCGGTCGATGAACGCCTCCTCGTGTGTCAAGCACCCCACTACG
GCCGAGGCGAAGGCCTTGGGACTTCCGGGTCACCCAGAAGGAGGGGACGG
GATAGAGACGGAAAGTCGCGATGTTGGCGGCAAGCGGAGTTTCGACGTTT
CTAGTTCTGTGATGGGGTTCCTTAACAGTACTTGTAGAGGGTTTGGGTCT
GTCAGCAACCTTCCCGCCGTGGCTGACGGAAATCACGATAGCGACCCCGT
TGGTGTCACCGTGGACAGGAACGCCATGCCTAACATAGGACAATTTGGCG
CGAATACACTTGGATCTTGCGTCGATGTGCAAACCACCTGCCTACACGAT
GCCTCTCGGGGAGGTGATACACCCGGGAGTAGCGTCAGCACTCCAGGCCC
AGTGAACAACGCCCCTGCACGTGGGCAGGGCAGGTTTGGCTTCAACCAGT
TTGGTACTTGTGTCGGTACCCAAAGCAGCAACCAAGATGGCAGCAGCAGC
AGTGCCACATCGACTTCGATGAGTGACGGAACCCACAGCAGAAGCAGCGC
GACGTGGCGGAACAATGTTGGATACCCCGCTCACGATAGCATGGGCTCGC
GTTATGGGTCGAGCAGGGTAGTAGTAGAACAGCGACGAAACAAACGCGAT
CGCAGGGGCTATGAAAACGGTCAGTCAATCCTAGGAGGAAGCACGACTAG
CGGTTCCACGATGAGCCGCCTGCGAAGCTACGGAGATGGAAGCACTTGCT
CTAGCAGCTCTTGGAACCCTAGCCGGAACAGCAGCCAGTGGGACGGAAGC
GCGACGAGCGGAAAATACAACAACTTCGGGTTTCCTTCAGTCCCCAGAGA
AAAATGTCCAGAGGGGGGACTGTACGGCGGCGTACCGCGATCGTACTCTA
GCCGCGACCGCATCCACTTCGCTATC
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