mRNA_D-dudresnayi_contig971.28485.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A516AGA0_LINPO (DNA topoisomerase 3-alpha n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AGA0_LINPO) HSP 1 Score: 97.8 bits (242), Expect = 5.360e-21 Identity = 53/103 (51.46%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 16 GEECALRTVSKEGPNQGRQFYCCARQDRSEQC-YFAWADEEP-PDGXXXXSGDGRLCEGH----GEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADE 306 G+ + TV KEGPN GR F+ C++ + EQC YF WADE P P + G+ G G P TVRKEG N GR FY CP PQGEQC FFQWADE Sbjct: 468 GQPSLVLTVRKEGPNMGRVFFKCSKP-QGEQCSYFQWADEPPRPASGSGPANPGQDTAGPACLCGHPSVTLTVRKEGPNTGRMFYKCPMPQGEQCGFFQWADE 569
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A3M6V831_9STRA (DNA topoisomerase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V831_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 5.520e-21 Identity = 50/121 (41.32%), Postives = 58/121 (47.93%), Query Frame = 1 Query: 4 CPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQC-YFAWADE----------EPPDGXXXXSGDGRLCEGHGEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNSGSSS 333 CPGH E C RTV K+GPN+GRQFY C R C +F W +P SG +C GH C LR RK G NQ R+FY C C FF+W DE Q +SS Sbjct: 785 CPGHDEPCDERTVKKDGPNKGRQFYTCRRSQTDNSCGFFQWKGNITEAPGRPVAQPAPRVAGASGTTPICSGHHTTCDLRITRKAGPNQNREFYCCSFQGAASCGFFEWKDEQCQQQPTSS 905
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: UPI000719AA75 (DNA topoisomerase 3-alpha-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AA75) HSP 1 Score: 94.7 bits (234), Expect = 6.590e-20 Identity = 51/107 (47.66%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 1 VCPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXSGDGRLCEGHGEPC------SLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWAD 303 VC G G + ALRTV KEGPN+GR FY C+R +F W D+ PP SGD + C S RTV+K+G N+GRQFY C +PQ QC FF+WAD Sbjct: 724 VC-GCGNDAALRTVVKEGPNRGRAFYVCSRAGPQPCDFFMWGDDGPP---APRSGDFGGADNATANCRCGVAASKRTVQKDGPNRGRQFYVCSKPQEAQCGFFEWAD 826
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A1W4X2E7_AGRPL (DNA topoisomerase n=2 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4X2E7_AGRPL) HSP 1 Score: 93.6 bits (231), Expect = 1.680e-19 Identity = 50/111 (45.05%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 16 GEECALRTVSKEGPNQGRQFYCCARQDRSEQC-YFAWADEEPPDGXXXXSGDGRLCEGHGE--------PCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNS 321 GE+ +L TV KEGPN GRQFY C R C +F WADE+ + R+ G P +LRTV K G N+GRQFY CP+P G+ C+FF+WADE S Sbjct: 866 GEQASLLTVRKEGPNTGRQFYKCRRGKEGGGCDFFLWADED----RNLTLNNTRVLPGASTTPVCMCNTPATLRTVSKAGPNKGRQFYCCPKPMGQGCNFFKWADETDNRS 972
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A7S2RAZ2_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RAZ2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.840e-19 Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 4 CPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEP--------PDGXXXXSGDGRLCEGHGEPCSLRTVRKEGANQGRQFYPCPRPQGE-QCSFFQWAD 303 CP H + C + TV KEGPNQGR FY C+ ++ +FAWADE S C+ HG PC + V+KEG NQGR+FY C G +C FF+W + Sbjct: 175 CPEHSQPCRVFTVKKEGPNQGRAFYKCSLPPTAQCKFFAWADENNNKKPGNSNKSNVKHESKSTVTCKEHGHPCRIFKVKKEGPNQGREFYSCSLAPGNGKCKFFKWVE 283
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A369SHI0_9METZ (DNA topoisomerase n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SHI0_9METZ) HSP 1 Score: 91.3 bits (225), Expect = 1.070e-18 Identity = 53/135 (39.26%), Postives = 68/135 (50.37%), Query Frame = 1 Query: 19 EECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXSGDGRLCEGHGEP--------------------CSL----RTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNSGSSSWGNSGI 351 EE L TV K+GPN GRQFY C ++D S +F WADE SG + P C + RTV+KEGAN+GRQFY C +PQG QC+FF+W D D + +S+W +G Sbjct: 718 EEAILLTVKKQGPNCGRQFYKCNKRDSSACGFFLWADEPQNQAQRGSSGSRTFSSNNAFPGSSGLHDGNTSGDNSCVKCLCDIPAVSRTVQKEGANKGRQFYCCSKPQGNQCTFFKWVD-DTSAATTSNWNENGT 851
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: D6WYH2_TRICA (DNA topoisomerase n=2 Tax=Tribolium castaneum TaxID=7070 RepID=D6WYH2_TRICA) HSP 1 Score: 91.3 bits (225), Expect = 1.070e-18 Identity = 50/119 (42.02%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 22 ECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXSGDGR-----LCEGHGEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNSGSSSWGNSGIGYTP 363 E TV K+GPN+GR+FY C Q +F WA +EP + + + C+ P S RTV KEG N+GR FY CP+P G+ C FFQWADED G G+ G G P Sbjct: 802 EAVQLTVRKDGPNKGRKFYKCKNQTCD---FFLWASDEPSNANTTINSQQQNDVKCKCD---LPASRRTVSKEGPNKGRPFYCCPKPMGQGCGFFQWADEDNDGGGDGGPGDDGHGGGP 914
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A653DS45_CALMS (CCHC-type domain-containing protein (Fragment) n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DS45_CALMS) HSP 1 Score: 89.7 bits (221), Expect = 1.530e-18 Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 31 LRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXSGDGRLCEGH---------GEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADEDQQNSG 324 L TV K+GPN+GRQFY C + +F WA + P+G SG R G+ G+ +LRTV KEG N+GRQFY CP+P GE C FF+WADE + G Sbjct: 189 LLTVRKDGPNKGRQFYKCPEAVCN---FFLWAPD--PNGTASTSGSPRTSFGNVQQDMRCNCGQQAALRTVNKEGPNKGRQFYCCPKPIGEGCKFFKWADESDNDWG 290
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A8D0BPX6_9SAUR (DNA topoisomerase n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BPX6_9SAUR) HSP 1 Score: 90.5 bits (223), Expect = 2.000e-18 Identity = 55/124 (44.35%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 16 GEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGXXXXS---------------GDGRL-CEGH----------GEPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADED 309 G E L TV KEG NQGRQFY C+ S +F WAD++P +G G GR EG G+P LRTV+KEG NQGRQF+ C +P+ EQC FFQWADE+ Sbjct: 806 GAEAVLLTVRKEGANQGRQFYKCSAGRCS---FFLWADQQPGNGGNGAPRASAPAPGSFGRGERGVGRSRSEGSDPGAGVECRCGQPSVLRTVQKEGPNQGRQFHACSKPREEQCGFFQWADEN 926
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Match: A0A6P8I7Q1_ACTTE (DNA topoisomerase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I7Q1_ACTTE) HSP 1 Score: 90.5 bits (223), Expect = 2.010e-18 Identity = 51/133 (38.35%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 1 VCPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADE---------------EPPDGXXXXSGDGRLCEGHG---------------EPCSLRTVRKEGANQGRQFYPCPRPQGEQCSFFQWADED 309 VC G G L TV KEGPN+GR FY C+++D +F W D+ +PP+ + +G + + EP RTV+K+G NQGRQFY CP+P G+ CSFFQWAD+D Sbjct: 851 VC-GCGHPATLLTVKKEGPNKGRPFYRCSQRDGXCD-FFLWGDDGAPANNTASGAPFGSQPPNRNTSWNNNGGFQDSNSNQGFDDPNQTVCNCNEPAVSRTVKKDGPNQGRQFYACPKPMGQGCSFFQWADQD 981 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig971.28485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig971.28485.1 >prot_D-dudresnayi_contig971.28485.1 ID=prot_D-dudresnayi_contig971.28485.1|Name=mRNA_D-dudresnayi_contig971.28485.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=139bp VCPGHGEECALRTVSKEGPNQGRQFYCCARQDRSEQCYFAWADEEPPDGGback to top mRNA from alignment at D-dudresnayi_contig971:7952..9104+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig971.28485.1 ID=mRNA_D-dudresnayi_contig971.28485.1|Name=mRNA_D-dudresnayi_contig971.28485.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1153bp|location=Sequence derived from alignment at D-dudresnayi_contig971:7952..9104+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig971:7952..9104+ >mRNA_D-dudresnayi_contig971.28485.1 ID=mRNA_D-dudresnayi_contig971.28485.1|Name=mRNA_D-dudresnayi_contig971.28485.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at D-dudresnayi_contig971:7952..9104+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |