mRNA_D-dudresnayi_contig9671.28459.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A7S1HPI4_9EUKA (60S ribosomal protein L13 n=2 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S1HPI4_9EUKA) HSP 1 Score: 398 bits (1023), Expect = 2.280e-139 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 2 Query: 23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 643 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE Sbjct: 1 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 207
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A7S3HKM7_9STRA (60S ribosomal protein L13 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKM7_9STRA) HSP 1 Score: 352 bits (903), Expect = 4.200e-121 Identity = 176/206 (85.44%), Postives = 195/206 (94.66%), Query Frame = 2 Query: 23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKD 640 MVKHNNVIPGQHFHKDWAKRVKTWF QP+QKKIRRD RKEKAAKNAPRP+SGSLRPLVHCPTQKYNSK+KLGRGFTLEELKAAGINR+FAQTVGI+VDHRRTNKCEESL+ NVDRLKSYKARLVIFPRRAG+ K GDSSAAEIAEA K+DV+I S+PK+ EAVTFT +TEE+KAA+GYA LR+ARTDARLVGIRKK K+AKE+K++ Sbjct: 1 MVKHNNVIPGQHFHKDWAKRVKTWFSQPIQKKIRRDRRKEKAAKNAPRPASGSLRPLVHCPTQKYNSKIKLGRGFTLEELKAAGINRQFAQTVGISVDHRRTNKCEESLNLNVDRLKSYKARLVIFPRRAGIIKKGDSSAAEIAEAHKLDVNIASLPKKEEAVTFTAITEELKAAKGYATLRQARTDARLVGIRKKQKDAKEKKEE 206
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A812RHB8_SYMMI (60S ribosomal protein L13 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RHB8_SYMMI) HSP 1 Score: 240 bits (612), Expect = 7.450e-77 Identity = 127/206 (61.65%), Postives = 156/206 (75.73%), Query Frame = 2 Query: 23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFT-TVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKK 637 MV+HNNV+P QHFHKDW +RVKTWF QP+QKK RR+ RK KAA+ APRP+SG LRPLV CPTQKY++KV+ GRGFTLEELK AGI K AQT+GI+VDHRRTNK ESL NV RLK YK+RLV+FPR+ + GD+S EIA+AQ++ +I + P AVT +T+EMKA + Y LR AR DARL+G R K +KE++K Sbjct: 1 MVRHNNVVPNQHFHKDWDRRVKTWFHQPMQKKARREKRKIKAARLAPRPASGPLRPLVRCPTQKYSTKVRSGRGFTLEELKEAGIPAKLAQTIGISVDHRRTNKSVESLQLNVQRLKEYKSRLVVFPRKGNKPRAGDASKEEIAQAQQLKGEIVARPAAEPAVTLGGKITDEMKAFRAYGTLRAARNDARLLGKRITKKNSKEDEK 206
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A7I4BRC6_PHYPA (60S ribosomal protein L13 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4BRC6_PHYPA) HSP 1 Score: 218 bits (555), Expect = 4.230e-68 Identity = 116/211 (54.98%), Postives = 151/211 (71.56%), Query Frame = 2 Query: 11 LSFKMVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEA--KEEKK 637 LS MVKHNNVIP HF KDW V+TWF QP +KK RR R++KAA PRP++G LRP+VH T +YN+K++ GRGFTL+ELKAAGI +K A T+GIAVDHRR N+C ESL NV+RL +Y+A+LV+FPRRA K GD++A E++ A ++ + + K V +VT+EMK+ +GY LR+ R + RLVG+RKK E KEEKK Sbjct: 4 LSSTMVKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQKKAAAVFPRPTAGPLRPVVHSQTLRYNAKIRAGRGFTLDELKAAGIPKKLAPTIGIAVDHRRKNRCLESLQENVNRLNTYRAKLVVFPRRARKSKAGDATAEELSSATQVTRSVLPIVKPRPTVEIVSVTDEMKSQKGYYKLRQERMNERLVGVRKKKAEQAEKEEKK 214
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A3S3QHW5_9MAGN (60S ribosomal protein L13 n=3 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3QHW5_9MAGN) HSP 1 Score: 216 bits (549), Expect = 2.740e-67 Identity = 118/207 (57.00%), Postives = 144/207 (69.57%), Query Frame = 2 Query: 23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 643 MVKHNNVIP HF K W VKTWF QP +K RR R++KA K PRP+SG LRP+VHC T KYN K++ GRGF+LEELKAAGI +K A T+GIAVDHRR N+ E L NV RLK+YKA+LVIFPRR+G FKNGDSSA E+A A ++ D + + V VT+EMKA + Y LR +T+ R G R +K+A E +KDE Sbjct: 1 MVKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKVFPRPTSGPLRPVVHCQTLKYNMKLRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQNNVQRLKTYKAKLVIFPRRSGKFKNGDSSAEELASATQVHGDYMPITREKPVVELVKVTDEMKAFKAYQKLRLEQTNKRHHGAR--LKKAAEAEKDE 205
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A836C9T6_9STRA (60S ribosomal protein L13 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T6_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.830e-67 Identity = 121/209 (57.89%), Postives = 149/209 (71.29%), Query Frame = 2 Query: 23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVF-KNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMK-EAKEEKKDE 643 MVKHNNVIP HFHK W RVKTWF QP++KK RR R KAA APRP+ LRP VHCPT KYN KV+LGRGFTL ELK AGI+RK A+T+GI+VDHRRTN+ ++ NV RLK Y+++L+IFPRR+ K GD++ + A A ++ + + K AV F VT+EMKA + Y ALR AR+DARLVGIRKK E K+ +KDE Sbjct: 1 MVKHNNVIPNGHFHKKWQTRVKTWFDQPMKKKARRMRRAAKAAAVAPRPTQ-LLRPAVHCPTIKYNMKVRLGRGFTLAELKEAGISRKVARTIGISVDHRRTNRSLATMQNNVARLKEYQSKLIIFPRRSNAKPKAGDAAPGDTAAAAQVTGAVMPLTKAVPAVAFAAVTDEMKAFKAYEALRVARSDARLVGIRKKQAAEKKDAEKDE 208
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A176VM06_MARPO (60S ribosomal protein L13 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VM06_MARPO) HSP 1 Score: 215 bits (547), Expect = 5.680e-67 Identity = 115/207 (55.56%), Postives = 147/207 (71.01%), Query Frame = 2 Query: 23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 643 MVKHNNVIP HF KDW VKTWF QP +KK RR +R++KA PRP++G+LRP+V TQ+YN KV+ GRGFT EELKAAGI++K A T+GIAVDHRR NKC ESL NV RL +YKA+LV+FPRR+ K GDS+A E+A ++ + + AV +T EMK A+ YA +R R +ARLVG+RKK K A+ EK+++ Sbjct: 1 MVKHNNVIPNGHFKKDWQNYVKTWFNQPARKKRRRTVRQKKAVTIFPRPTAGALRPVVRSQTQRYNMKVRAGRGFTFEELKAAGISKKLAGTIGIAVDHRRKNKCLESLQANVQRLNTYKAKLVVFPRRSRKVKAGDSTAEELASVTQLQGPVLPIISERPAVELVPITAEMKNAKAYAKIRLERMNARLVGVRKK-KAAEAEKEEK 206
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A2K1L9U4_PHYPA (60S ribosomal protein L13 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L9U4_PHYPA) HSP 1 Score: 216 bits (550), Expect = 1.980e-66 Identity = 115/210 (54.76%), Postives = 150/210 (71.43%), Query Frame = 2 Query: 14 SFKMVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEA--KEEKK 637 S MVKHNNVIP HF KDW V+TWF QP +KK RR R++KAA PRP++G LRP+VH T +YN+K++ GRGFTL+ELKAAGI +K A T+GIAVDHRR N+C ESL NV+RL +Y+A+LV+FPRRA K GD++A E++ A ++ + + K V +VT+EMK+ +GY LR+ R + RLVG+RKK E KEEKK Sbjct: 72 SSTMVKHNNVIPNGHFKKDWQNYVRTWFNQPARKKRRRTARQKKAAAVFPRPTAGPLRPVVHSQTLRYNAKIRAGRGFTLDELKAAGIPKKLAPTIGIAVDHRRKNRCLESLQENVNRLNTYRAKLVVFPRRARKSKAGDATAEELSSATQVTRSVLPIVKPRPTVEIVSVTDEMKSQKGYYKLRQERMNERLVGVRKKKAEQAEKEEKK 281
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A0D6R217_ARACU (60S ribosomal protein L13 n=3 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R217_ARACU) HSP 1 Score: 212 bits (540), Expect = 6.310e-66 Identity = 114/207 (55.07%), Postives = 145/207 (70.05%), Query Frame = 2 Query: 23 MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEEKKDE 643 MVKHNNV+P HF K W + VKTWF QP +K RR R++KA K PRP++G LRP+VHC TQ+YN KV+ GRGF+LEELKAAGI +K A T+GIAVDHRR N+ E L +NV RLK+YKA+LV+FPR A FK GDS+A E+A A ++ + + +V VT+EMK+ + YA LR R + R+VG R MK A E +KDE Sbjct: 1 MVKHNNVVPNGHFKKHWQRYVKTWFNQPARKARRRTARQKKAVKIFPRPTTGPLRPIVHCQTQRYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRTARKFKAGDSNAEELAAATQVQGTYMPIVQEKPSVELVKVTDEMKSFKAYAKLRVERMNKRMVGTR--MKRAAEAEKDE 205
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Match: A0A6P8I3C7_ACTTE (60S ribosomal protein L13 n=2 Tax=Actiniaria TaxID=6103 RepID=A0A6P8I3C7_ACTTE) HSP 1 Score: 212 bits (539), Expect = 1.020e-65 Identity = 109/201 (54.23%), Postives = 144/201 (71.64%), Query Frame = 2 Query: 29 KHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSSGSLRPLVHCPTQKYNSKVKLGRGFTLEELKAAGINRKFAQTVGIAVDHRRTNKCEESLSTNVDRLKSYKARLVIFPRRAGVFKNGDSSAAEIAEAQKIDVDITSMPKRAEAVTFTTVTEEMKAAQGYAALRRARTDARLVGIRKKMKEAKEE 631 K NNVIP HFHKDW + VKTWF QP +KK RR RKEKA K APRP +G++RP+V CPT KYN+K++ GRGFTL+ELKAAGI RK AQT+GIAVDHRR N+ ESL NV RLK YK++L+IFPR+AG K GDS AA++ A ++ ++ + + + + +T+E K + +R R++ARL+GIR+K + K E Sbjct: 4 KRNNVIPNAHFHKDWQRYVKTWFNQPGRKKRRRTARKEKAIKIAPRPVAGAIRPIVRCPTFKYNTKIRAGRGFTLDELKAAGIPRKVAQTIGIAVDHRRKNRSTESLQANVQRLKEYKSKLIIFPRKAGKPKQGDSEAADLENAVQLQGEVMPIQQPSVQIKARPITDEEKKFSVFKTMRIERSNARLIGIREKRAKEKAE 204 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9671.28459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9671.28459.1 >prot_D-dudresnayi_contig9671.28459.1 ID=prot_D-dudresnayi_contig9671.28459.1|Name=mRNA_D-dudresnayi_contig9671.28459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=208bp MVKHNNVIPGQHFHKDWAKRVKTWFGQPVQKKIRRDLRKEKAAKNAPRPSback to top mRNA from alignment at D-dudresnayi_contig9671:5868..6880- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9671.28459.1 ID=mRNA_D-dudresnayi_contig9671.28459.1|Name=mRNA_D-dudresnayi_contig9671.28459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1013bp|location=Sequence derived from alignment at D-dudresnayi_contig9671:5868..6880- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9671:5868..6880- >mRNA_D-dudresnayi_contig9671.28459.1 ID=mRNA_D-dudresnayi_contig9671.28459.1|Name=mRNA_D-dudresnayi_contig9671.28459.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at D-dudresnayi_contig9671:5868..6880- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |