prot_D-dudresnayi_contig9360.28156.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9360.28156.1
Unique Nameprot_D-dudresnayi_contig9360.28156.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length131
Homology
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BLAST of mRNA_D-dudresnayi_contig9360.28156.1 vs. uniprot
Match: D7FKN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKN3_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 9.570e-52
Identity = 96/130 (73.85%), Postives = 106/130 (81.54%), Query Frame = 0 
Query:    1 MAPVGQSVVGGLAVACACLASSGDAFFTGAGLPVASRAGVARGGCGGLSMSKHVQNKGAKKFVKNRPRKSRPSDRNRKPAVYSVEVMTNGNFPGAPPVYELLEEPAEGIDTKASVIEALATAEYEAKLVA 130
            MAPVG+ VVGGL V CACLA + DAFFTG  LP +SRAG ARGG G L M+KH QNKG KK VKNRPRKSR SDRNRKP  YS+EV TNGNFPGAPPV+EL  EP EGIDTKASVIEALA+AE++A+  A
Sbjct:    1 MAPVGR-VVGGLVVVCACLAPATDAFFTGVALP-SSRAGAARGGNGALEMAKHRQNKGTKKHVKNRPRKSRLSDRNRKPTDYSIEVNTNGNFPGAPPVFELESEPEEGIDTKASVIEALASAEWDAEQAA 128
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BLAST of mRNA_D-dudresnayi_contig9360.28156.1 vs. uniprot
Match: A0A836CBS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.730e-20
Identity = 52/96 (54.17%), Postives = 66/96 (68.75%), Query Frame = 0 
Query:   12 LAVACACLASSGDAFFTGAGLPVASRAGVARGGCGGLSMSKHVQNKGAKKFVKNRPRKSRPSDRNRKPAVYSVEVMTNG-NFPGAPPVYELLEEPA 106
            LA+ CA + +   + F G    V+ RA V R   G L M+KH Q KGAKK  KNRP+KS PSDRN KPA YS+E+M+NG ++PG PPVYE++EE A
Sbjct:   10 LALLCAAVMAFQPSCFAGTSSVVSQRAAV-RSSRGVLHMAKHAQAKGAKKHQKNRPKKSNPSDRNHKPAEYSLEIMSNGRDYPGKPPVYEIVEEAA 104
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BLAST of mRNA_D-dudresnayi_contig9360.28156.1 vs. uniprot
Match: A0A7S0TII6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TII6_HEMAN)

HSP 1 Score: 52.0 bits (123), Expect = 7.690e-6
Identity = 39/81 (48.15%), Postives = 46/81 (56.79%), Query Frame = 0 
Query:    8 VVGGLAVACACLASSGDAFFTGAGLPVASRA-GVARGGCGGLSMSKHVQNKGAKKFVKNRPRKSRPSDRNRKPAVYSVEVM 87
            + G L VA A  A SG A    A +   S     +RGG   L+M+  V NKGAK+  KNRPRKSR SD NRK   Y+VE M
Sbjct:   11 LAGALEVASAFSAGSGFASLRTASITSESSCLPTSRGGLSSLNMAHFVNNKGAKESRKNRPRKSRLSDINRKTPEYAVETM 91
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BLAST of mRNA_D-dudresnayi_contig9360.28156.1 vs. uniprot
Match: A0A7S4KV47_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KV47_GUITH)

HSP 1 Score: 49.7 bits (117), Expect = 4.470e-5
Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:   12 LAVACACLASSGDAFFTGAGLPVASR-AGV-ARGGCGGLSMSKHVQNKGAKKFVKNRPRKSRPSDRNRKPAVYSVEVMT 88
            L +  A +AS  +AF     +PVA + AG+  R G   LSM+ H   KGA K  KNRPRK+RPSD NRKP  Y+ + M+
Sbjct:    5 LILCAAAMASIAEAF-----MPVAPQGAGLRCRTGVSSLSMAHHPNPKGALKARKNRPRKTRPSDINRKPPPYNPDPMS 78
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9360.28156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FKN3_ECTSI9.570e-5273.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBS4_9STRA1.730e-2054.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0TII6_HEMAN7.690e-648.15Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S4KV47_GUITH4.470e-546.84Hypothetical protein n=3 Tax=Guillardia theta TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020526Ribosomal protein L6, chloroplastPFAMPF17257DUF5323coord: 51..83
e-value: 2.6E-7
score: 30.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..130
NoneNo IPR availablePRODOMPD069352coord: 42..82
e-value: 4.0E-5
score: 107.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9360contigD-dudresnayi_contig9360:5363..8462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9360.28156.1mRNA_D-dudresnayi_contig9360.28156.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9360 4520..9817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9360.28156.1 ID=prot_D-dudresnayi_contig9360.28156.1|Name=mRNA_D-dudresnayi_contig9360.28156.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=131bp
MAPVGQSVVGGLAVACACLASSGDAFFTGAGLPVASRAGVARGGCGGLSM
SKHVQNKGAKKFVKNRPRKSRPSDRNRKPAVYSVEVMTNGNFPGAPPVYE
LLEEPAEGIDTKASVIEALATAEYEAKLVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020526Ribosomal_L6_chp