prot_D-dudresnayi_contig936.28154.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig936.28154.1
Unique Nameprot_D-dudresnayi_contig936.28154.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length239
Homology
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BLAST of mRNA_D-dudresnayi_contig936.28154.1 vs. uniprot
Match: A0A6H5L091_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L091_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.440e-34
Identity = 84/201 (41.79%), Postives = 115/201 (57.21%), Query Frame = 0 
Query:    1 LTLKSSSNVRFVNVGFTVMSDAALVFDMPKTKIGPNA---DGSREENGYIVDVQEGASATFLGKVVAKEASNMYALFRNAGTLEFKKSASFTDGGNVVRPNXXXXXXXXXXXXXDNKYLAIQNDDSGFVRFSKAAEFDANARSFDGAFGCSVTNSDSTGTIIFAGDASFSNDDCNEGSSVYNA-GVMKFKENAYFNDNVGD 197
            +TLKSSS VRFVN+ F V   A LVFDMP+T  GPN    +G+   N + ++V EGA+ TF+G VVA + SN +  F N G++EF+++A F DG  V   N             +N++ AIQN  SG++RFSK   FD N+   D    CS++  D    I+  GDA F N +C  G +++   G  KF   AYFN+N  D
Sbjct:   74 VTLKSSSYVRFVNIEFDVKPGATLVFDMPETYFGPNTARKEGTWYYNSFGMNVDEGATVTFVGGVVASDVSNAFTAFYNRGSMEFQETALFEDGTYVFYENQGTIKFRGDATFRNNRFHAIQNIFSGYIRFSKDVLFDGNSYETDIIGTCSLSCIDEESRIVVRGDAVFQNHNC-PGVALWQLYGTTKFYGKAYFNNNSRD 273
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig936.28154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L091_9PHAE1.440e-3441.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 214..233
e-value: 0.0013
score: 16.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig936contigD-dudresnayi_contig936:16528..24067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig936.28154.1mRNA_D-dudresnayi_contig936.28154.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig936 16528..24067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig936.28154.1 ID=prot_D-dudresnayi_contig936.28154.1|Name=mRNA_D-dudresnayi_contig936.28154.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=239bp
LTLKSSSNVRFVNVGFTVMSDAALVFDMPKTKIGPNADGSREENGYIVDV
QEGASATFLGKVVAKEASNMYALFRNAGTLEFKKSASFTDGGNVVRPNTG
TIKFRGNATFKDNKYLAIQNDDSGFVRFSKAAEFDANARSFDGAFGCSVT
NSDSTGTIIFAGDASFSNDDCNEGSSVYNAGVMKFKENAYFNDNVGDGNG
GGIYARGGSLIFKGDTEFNNNYSTDSGGGLAVTEGDVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat